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Don't use default assay name for Seurat objects#507

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aaronwolen merged 2 commits intomain-oldfrom
aaronwolen/sc-23236/fix-for-recreating-multi-assay-seurat-objects
Nov 7, 2022
Merged

Don't use default assay name for Seurat objects#507
aaronwolen merged 2 commits intomain-oldfrom
aaronwolen/sc-23236/fix-for-recreating-multi-assay-seurat-objects

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@aaronwolen aaronwolen commented Nov 4, 2022

This implements @dan11mcguire's fix for https://github.com/TileDB-Inc/tiledbsc/issues/82. Previously we were implicitly using Seurat's default name for the first assay created by to_seurat(). Now we always explicitly supply an assay name from the corresponding SOMA.

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This pull request has been linked to Shortcut Story #23236: Fix for recreating multi-assay Seurat objects.

@aaronwolen aaronwolen changed the base branch from main to main-old November 4, 2022 19:58
@aaronwolen aaronwolen requested a review from johnkerl November 4, 2022 19:59
@aaronwolen aaronwolen marked this pull request as ready for review November 4, 2022 19:59
@aaronwolen aaronwolen merged commit b0a4c84 into main-old Nov 7, 2022
@aaronwolen aaronwolen deleted the aaronwolen/sc-23236/fix-for-recreating-multi-assay-seurat-objects branch November 7, 2022 19:32
@aaronwolen aaronwolen mentioned this pull request Dec 19, 2022
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2 participants