Checkpoint/02 02 26

.clang-format

@@ -4,4 +4,4 @@ ColumnLimit: 100
 AllowShortFunctionsOnASingleLine: Inline
 DerivePointerAlignment: false
 PointerAlignment: Left
-UseTab: Never
+UseTab: Never

.cmake-format

@@ -0,0 +1,7 @@
+format:
+  tab_size: 2
+  line_width: 100
+  dangle_parens: true
+  max_pargs_hwrap: 3
+  separate_ctrl_name_with_space: false
+  separate_fn_name_with_space: false

.devcontainer/devcontainer.json

@@ -6,7 +6,7 @@
 		// Sets the run context to one level up instead of the .devcontainer folder.
 		"context": "..",
 		// Update the 'dockerFile' property if you aren't using the standard 'Dockerfile' filename.
-		"dockerfile": "../Dockerfile",
+		"dockerfile": "../infrastructure/docker/Dockerfile",
 	},
 	"runArgs": [
 		"-ti",

.editorconfig

@@ -0,0 +1,17 @@
+root = true
+
+[CMakeLists.txt]
+indent_style = space
+indent_size = 4
+end_of_line = lf
+charset = utf-8
+trim_trailing_whitespace = true
+insert_final_newline = true
+
+[*.{sh,sh.in}]
+indent_style = space
+indent_size = 2
+end_of_line = lf
+charset = utf-8
+trim_trailing_whitespace = true
+insert_final_newline = true

.github/workflows/format-check.yml

@@ -13,12 +13,27 @@ jobs:
     steps:
     - uses: actions/checkout@v4
 
+    - name: Set up Go
+      uses: actions/setup-go@v5
+      with:
+        go-version: '1.21'
+
     - name: Install clang-format
       run: |
         sudo apt-get update
         sudo apt-get install -y --no-install-recommends \
             build-essential \
             clang-format-19
+
+    - name: Install shfmt
+      run: |
+        go install mvdan.cc/sh/v3/cmd/shfmt@latest
+        echo "$HOME/go/bin" >> $GITHUB_PATH
+
+    - name: Install cmake-format
+      run: |
+        sudo apt-get install -y python3-pip
+        sudo pip3 install cmake-format
 
     - name: Test formatting
       run: |

.gitignore

@@ -78,4 +78,8 @@ poc/bpf-core/vmlinux.h
 deps
 
 #nfs
-*.nfs*
+*.nfs*
+
+# Sphinx documentation builds
+docs/_build/
+docs/_static/__pycache__/

.shellcheckrc

@@ -0,0 +1,15 @@
+# .shellcheckrc for CMake templates
+# Allow @placeholder@ sourcing
+disable=SC1090,SC1091
+# Allow sed patterns with @ symbols
+disable=SC2001
+# Allow @VAR@ unquoted (will be replaced)
+disable=SC2086
+disable=SC2050
+disable=SC2155
+
+# Enforce style
+# Use [[ ]] consistently
+enable=require-double-brackets
+# Use ${var} consistently
+enable=require-variable-braces

.vscode/settings.json

@@ -1,7 +1,4 @@
 {
-    "cmake.configureArgs": [
-        "-DCMAKE_PREFIX_PATH=/home/cc/datacrumbs/dependency/.spack-env/view"
-    ],
     "editor.formatOnSave": true,
     "files.associations": {
         "string": "cpp",

CMakeLists.txt

@@ -62,6 +62,7 @@ option(DATACRUMBS_TRACE_ALL_PROCESSES_OPT "Trace all processes" OFF)
 set(DATACRUMBS_INCLUSION_PATH "NONE" CACHE STRING "Inclusion path for datacrumbs")
 set(DATACRUMBS_CONFIGURED_TRACE_DIR "/tmp" CACHE STRING "Trace directory for datacrumbs")
 set(DATACRUMBS_CONFIGURED_LOG_DIR "/tmp" CACHE STRING "Log directory for datacrumbs")
+set(DATACRUMBS_CONFIGURED_RUN_DIR "NONE" CACHE STRING "Run directory for datacrumbs")
 
 option(DATACRUMBS_BPF_PRINT_ENABLE "Enable BPF print" OFF)
 set(DATACRUMBS_MODE_STR "TRACE" CACHE STRING "Mode for datacrumbs (TRACE or PROFILE)")
@@ -84,6 +85,15 @@ set(DATACRUMBS_SKIP_SMALL_EVENTS_THRESHOLD_NS "1000" CACHE STRING "Threshold in
 # Profiling Options
 set(DATACRUMBS_TIME_INTERVAL_NS "1000000" CACHE STRING "Profiling time interval in nanosecond")
 
+# Scheduling Options
+set(DATACRUMBS_LAUNCHER_TYPE "FLUX" CACHE STRING "Scheduler type for datacrumbs (FLUX, SLURM, OPENMPI, or NONE)")
+set_property(CACHE DATACRUMBS_LAUNCHER_TYPE PROPERTY STRINGS FLUX SLURM OPENMPI NONE)
+set(DATACRUMBS_SCHEDULER_JOBID_ENV_VAR "NONE" CACHE STRING "Scheduler job ID environment variable name")
+set(DATACRUMBS_SCHEDULER_NODES_CMD_OPT "NONE" CACHE STRING "Scheduler option for setting nodes")
+set(DATACRUMBS_SCHEDULER_PPN_CMD_OPT "NONE" CACHE STRING "Scheduler option for setting processes per node")
+set(DATACRUMBS_SCHEDULER_RUN_CMD "NONE" CACHE STRING "Scheduler run command")
+set(DATACRUMBS_SCHEDULER_RUN_EXTRA_ARGS "" CACHE STRING "Scheduler run extra args")
+
 # Other options
 set(DATACRUMBS_LOG_LEVEL_STR "INFO" CACHE STRING "Log Level for compiling ${UPPER_PROJECT_NAME}")
 set_property(CACHE DATACRUMBS_LOG_LEVEL_STR PROPERTY STRINGS ERROR WARN INFO DEBUG TRACE)
@@ -139,6 +149,11 @@ message(STATUS "             - Found kernel headers at: ${DATACRUMBS_KERNEL_HEAD
 message(STATUS "             - DATACRUMBS_KERNEL_UNAME_R: ${DATACRUMBS_KERNEL_UNAME_R}")
 message(STATUS "             - DATACRUMBS_CONFIGURED_TRACE_DIR: ${DATACRUMBS_CONFIGURED_TRACE_DIR}")
 message(STATUS "             - DATACRUMBS_CONFIGURED_LOG_DIR: ${DATACRUMBS_CONFIGURED_LOG_DIR}")
+message(STATUS "             - DATACRUMBS_LAUNCHER_TYPE: ${DATACRUMBS_LAUNCHER_TYPE}")
+message(STATUS "             - DATACRUMBS_SCHEDULER_JOBID_ENV_VAR: ${DATACRUMBS_SCHEDULER_JOBID_ENV_VAR}")
+message(STATUS "             - DATACRUMBS_SCHEDULER_NODES_CMD_OPT: ${DATACRUMBS_SCHEDULER_NODES_CMD_OPT}")
+message(STATUS "             - DATACRUMBS_SCHEDULER_PPN_CMD_OPT: ${DATACRUMBS_SCHEDULER_PPN_CMD_OPT}")
+message(STATUS "             - DATACRUMBS_SCHEDULER_RUN_CMD: ${DATACRUMBS_SCHEDULER_RUN_CMD}")
 
 if(NOT EXISTS "${DATACRUMBS_CONFIGURED_TRACE_DIR}")
     message(FATAL_ERROR "[${UPPER_PROJECT_NAME}] DATACRUMBS_CONFIGURED_TRACE_DIR does not exist: ${DATACRUMBS_CONFIGURED_TRACE_DIR}")
@@ -424,7 +439,7 @@ add_dependencies(datacrumbs_obj datacrumbs_bpf_skel)
 
 # Build the final executable by linking server.cpp and the object library
 add_executable(${PROJECT_NAME} ${DATACRUMBS_SERVER_SRC})
-target_link_libraries(${PROJECT_NAME} ${DEPENDENCY_LIB} datacrumbs_obj)
+target_link_libraries(${PROJECT_NAME} datacrumbs_obj ${DEPENDENCY_LIB})
 add_dependencies(${PROJECT_NAME} datacrumbs_bpf_skel datacrumbs_obj)
 
 # Install the main processing executable into DATACRUMBS_INSTALL_BINARYDIR
@@ -587,6 +602,8 @@ set(_DATACRUMBS_DATA_FILES
     "${CMAKE_DATA_OUTPUT_DIRECTORY}/categories-${DATACRUMBS_USER}-${DATACRUMBS_HOST}.json"
     "${CMAKE_DATA_OUTPUT_DIRECTORY}/probes-${DATACRUMBS_USER}-${DATACRUMBS_HOST}.json"
 )
+# Ensure the data output directory exists
+file(MAKE_DIRECTORY ${CMAKE_DATA_OUTPUT_DIRECTORY})
 
 if(_DATACRUMBS_DATA_FILES)
     install(FILES ${_DATACRUMBS_DATA_FILES}
@@ -775,6 +792,15 @@ install(
     ${DATACRUMBS_INSTALL_SBINARYDIR}
 )
 
+configure_file(${CMAKE_CURRENT_SOURCE_DIR}/scripts/datacrumbs/datacrumbs_salloc.in ${CMAKE_RUNTIME_OUTPUT_DIRECTORY}/datacrumbs_salloc @ONLY)
+install(
+    PROGRAMS
+    ${CMAKE_RUNTIME_OUTPUT_DIRECTORY}/datacrumbs_salloc
+    DESTINATION
+    ${DATACRUMBS_INSTALL_BINARYDIR}
+)
+
+
 # Create an empty directory at install time
 install(CODE "file(MAKE_DIRECTORY \"\${DATACRUMBS_INSTALL_LIBEXEC}/sbin\")")
 
@@ -795,15 +821,15 @@ if(NOT DATACRUMBS_INCLUSION_PATH STREQUAL "NONE")
     set(DATACRUMBS_VARS ${DATACRUMBS_VARS} --inclusion_path ${DATACRUMBS_INCLUSION_PATH})
 endif()
 
-add_test(NAME datacrumbs_start COMMAND ${DATACRUMBS_PATH}/datacrumbs start ${DATACRUMBS_HOST} ${DATACRUMBS_VARS})
+add_test(NAME datacrumbs_start COMMAND ${DATACRUMBCMAKE_RUNTIME_OUTPUT_DIRECTORYS_PATH}/datacrumbs start ${DATACRUMBS_HOST} ${DATACRUMBS_VARS})
 set_tests_properties(datacrumbs_start PROPERTIES DEPENDS datacrumbs_pretest)
 set_tests_properties(datacrumbs_start PROPERTIES DEPENDS ${PROJECT_NAME})
 
-add_test(NAME datacrumbs_run COMMAND ${DATACRUMBS_PATH}/datacrumbs run ${DATACRUMBS_HOST} ${DATACRUMBS_VARS})
+add_test(NAME datacrumbs_run COMMAND ${CMAKE_RUNTIME_OUTPUT_DIRECTORY}/datacrumbs run ${DATACRUMBS_HOST} ${DATACRUMBS_VARS})
 set_tests_properties(datacrumbs_run PROPERTIES DEPENDS datacrumbs_pretest)
 set_tests_properties(datacrumbs_run PROPERTIES DEPENDS ${PROJECT_NAME})
 
-add_test(NAME datacrumbs_stop COMMAND ${DATACRUMBS_PATH}/datacrumbs stop ${DATACRUMBS_HOST} ${DATACRUMBS_VARS})
+add_test(NAME datacrumbs_stop COMMAND ${CMAKE_RUNTIME_OUTPUT_DIRECTORY}/datacrumbs stop ${DATACRUMBS_HOST} ${DATACRUMBS_VARS})
 set_tests_properties(datacrumbs_stop PROPERTIES DEPENDS datacrumbs_pretest)
 set_tests_properties(datacrumbs_stop PROPERTIES DEPENDS ${PROJECT_NAME})
 

cmake/configure_files/datacrumbs_config.h.in

@@ -42,7 +42,7 @@
 #cmakedefine DATACRUMBS_CONFIG_PATH "@DATACRUMBS_CONFIG_PATH@"
 #cmakedefine DATACRUMBS_LOG_DIR "@DATACRUMBS_LOG_DIR@"
 #cmakedefine DATACRUMBS_DATA_DIR "@DATACRUMBS_DATA_DIR@"
-#cmakedefine DATACRUMBS_INSTALL_RUNSTATEDIR "@DATACRUMBS_INSTALL_RUNSTATEDIR@"
+#cmakedefine DATACRUMBS_INSTALL_RUNSTATEDIR "@DATACRUMBS_INSTALL_RUNSTATEDIR@/@PROJECT_NAME@"
 
 #cmakedefine DATACRUMBS_ENABLE_INCLUSION_PATH @DATACRUMBS_ENABLE_INCLUSION_PATH@
 #ifndef DATACRUMBS_ENABLE_INCLUSION_PATH