Macro Synteny Paf microservice#1113

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matthewwiese wants to merge 28 commits intomainfrom

macro-synteny-paf

Commits on Jul 8, 2024

Add macro-synteny-paf microservice
svengato
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Commits on Jul 9, 2024

Fix markdown format of macro-synteny-paf README.md
svengato
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Commits on Jul 30, 2024

Get data from other microservices instead of direct Redis database calls
svengato
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Commits on Sep 5, 2024

Look up chromosome names from genome prefixes
svengato
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Commits on Oct 17, 2025

Commits on Oct 21, 2025

Commits on Oct 24, 2025

Add json data return format
matthewwiese
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Commits on Oct 30, 2025

Adjust Redis Pipeline to improve performance of _getTargets()
matthewwiese
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Commits on Oct 31, 2025

Reimplement second Pipeline to count genes, keep batching approach
matthewwiese
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Commits on Nov 4, 2025

Use both terminal genes instead of just block.i
matthewwiese
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Commits on Nov 14, 2025

Commits on Nov 21, 2025

Aggregate results to improve performance by reducing data transfer
matthewwiese
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Commits on Jan 14, 2026

Implement identity metric for use in JBrowse Dynamic Synteny plugin
matthewwiese
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Commits on Jan 21, 2026

Implement 'regular' anchors by returning full DAG path nodes instead of just start and end
matthewwiese
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Commits on Jan 28, 2026

Update loader to use pyranges1 instead of gffutils
matthewwiese
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Commits on Feb 12, 2026

Commits on Mar 6, 2026

[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot]
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Commits on Mar 17, 2026

Fix pyranges1 import
matthewwiese
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