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  • De La Salle University

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@bioinfodlsu

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daphnejanelyn/README.md

πŸ’« About Me:

🌱 I'm currently a student taking my MS degree in Computer Science from De La Salle University under its integrated bachelor's-master's degree honors program.

πŸ”­ At the DLSU Bioinformatics Lab, my work is currently at the intersection of data science and biology, with a focus on the analysis of large-scale metagenomic sequence data in the profiling of antimicrobial resistance and mobile genetic elements.

🧬 In Philippine Genomics Center, I implemented a start to end bioinformatics pipeline to annotate LTR retrotransposons in Abaca and Banana genomes and align RNA-seq data from drought- and tissue culture stressed samples.

πŸš€ Throughout the years, I have been involved in a mix of data science and machine learning research projects, i.e. fuel prediction, global school-based student health survey data, car plate detection systems.

πŸ“ˆ In 2024, I was an Operations and Technology Innovations intern at Procter and Gamble where I pioneered a tracking system to monitor solution deployment across 1,000+ global manufacturing plants using Microsoft SQL and PowerBi. I also led the development of a C# web application for plant maintenance operations with integrated SSO-authentication and eliminate over 100 hours of accumulated technical debt.

πŸ‘― I’m looking to collaborate on any data science and AI Projects.

🌐 Socials:

LinkedIn

πŸ’» Tech Stack:

Python Bash Script R NodeJS Snakemake React .Net MySQL MongoDB Postgres Figma Pandas NumPy Plotly scikit-learn PyTorch Matplotlib Power Bi Docker Vue.js Bash Script C JavaScript Vercel Render WDL

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  1. bioinfodlsu/attack_amr_pipeline bioinfodlsu/attack_amr_pipeline Public

    Bioinformatics pipeline for profiling anti-microbial resistance genes from hospital wastewater

    Python 1 1

  2. Glove-Based-Pointing-Device-Using-MPU6050 Glove-Based-Pointing-Device-Using-MPU6050 Public

    C++

  3. KyleCarlo/HMM-application-to-CpG-detection-in-Human-Genome KyleCarlo/HMM-application-to-CpG-detection-in-Human-Genome Public

    Jupyter Notebook

  4. RNA-Seq-Gene-Expression-Colorectal-Cancer RNA-Seq-Gene-Expression-Colorectal-Cancer Public

  5. bioinfodlsu/metagenomics-workshop bioinfodlsu/metagenomics-workshop Public

    Material for workshop on shotgun metagenomics

    Jupyter Notebook

  6. car-detection-parallel car-detection-parallel Public

    Jupyter Notebook