Skip to content

Gen3SDK Tests#558

Open
krishnaa05 wants to merge 21 commits into
masterfrom
chore/gen3sdk_tests
Open

Gen3SDK Tests#558
krishnaa05 wants to merge 21 commits into
masterfrom
chore/gen3sdk_tests

Conversation

@krishnaa05
Copy link
Copy Markdown
Contributor

@krishnaa05 krishnaa05 commented May 27, 2026

Link to JIRA ticket if there is one: GQE-659

New Features

Breaking Changes

Bug Fixes

Improvements

Dependency updates

Deployment changes

@github-actions
Copy link
Copy Markdown

The style in this PR agrees with black. ✔️

This formatting comment was generated automatically by a script in uc-cdis/wool.

@github-actions
Copy link
Copy Markdown

Integration Tests

Failed to Prepare CI environment.

The following pods are not in healthy state:
gen3-user-data-library-deployment-767fc7d649-wsvks

Please find the Github Action logs here

@github-actions
Copy link
Copy Markdown

Integration Tests

Test summary after running integration tests

filepath passed failed skipped SUBTOTAL
tests/test_gen3_workflow.py 13 0 5 18
tests/test_oauth2.py 15 0 0 15
tests/test_centralized_auth.py 7 9 0 16
tests/test_graph_submit_and_query.py 13 0 1 14
tests/test_dicom_viewer.py 4 0 0 4
tests/test_audit_service.py 2 1 3 6
tests/test_requestor.py 6 0 0 6
tests/test_data_upload.py 3 5 1 9
tests/test_user_token.py 5 0 0 5
tests/test_dbgap.py 2 2 1 5
tests/test_drs_endpoint.py 4 0 0 4
tests/test_study_viewer.py 3 0 0 3
tests/test_user_data_library.py 2 0 2 4
tests/test_login_page.py 2 0 0 2
tests/test_discoverypage.py 1 0 0 1
tests/test_user_login_activation.py 2 0 1 3
tests/test_pfb_export.py 1 0 0 1
tests/test_register_user.py 2 0 0 2
tests/test_workspace.py 1 0 0 1
tests/test_oidc_client.py 2 0 0 2
tests/test_client_credentials.py 1 0 0 1
tests/test_guppy_service.py 8 0 0 8
tests/test_gen3client.py 1 0 0 1
tests/test_manifest_service.py 1 0 0 1
tests/test_fence_admin.py 2 0 0 2
tests/test_homepage.py 1 0 0 1
tests/test_aggregate_mds.py 1 0 0 1
tests/test_ras_authn.py 0 0 3 3
tests/test_gen3ff_landing_page.py 0 0 2 2
tests/test_env_sanity.py 0 0 1 1
tests/test_etl.py 0 0 1 1
tests/test_presigned_url.py 0 7 0 7
tests/test_google_data_access.py 0 1 0 1
TOTAL 105 25 21 151

Test summary after rerunning failed integration tests

filepath failed SUBTOTAL
tests/test_presigned_url.py 7 7
tests/test_data_upload.py 5 5
tests/test_dbgap.py 2 2
tests/test_centralized_auth.py 9 9
tests/test_google_data_access.py 1 1
tests/test_audit_service.py 1 1
TOTAL 25 25

Please find the detailed integration test report here

Please find the detailed integration test report after rerunning failed tests here

Please find the Github Action logs here

@github-actions
Copy link
Copy Markdown

Integration Tests

Test summary after running integration tests

filepath passed failed skipped SUBTOTAL
tests/test_presigned_url.py 0 7 0 7
tests/test_dbgap.py 2 2 1 5
tests/test_audit_service.py 2 1 3 6
tests/test_centralized_auth.py 7 9 0 16
tests/test_google_data_access.py 0 1 0 1
tests/test_data_upload.py 3 5 1 9
TOTAL 14 25 5 44

Test summary after rerunning failed integration tests

filepath failed SUBTOTAL
tests/test_presigned_url.py 7 7
tests/test_data_upload.py 5 5
tests/test_dbgap.py 2 2
tests/test_centralized_auth.py 9 9
tests/test_google_data_access.py 1 1
tests/test_audit_service.py 1 1
TOTAL 25 25

Please find the detailed integration test report here

Please find the detailed integration test report after rerunning failed tests here

Please find the Github Action logs here

@github-actions
Copy link
Copy Markdown

Integration Tests

Test summary after running integration tests

filepath passed failed skipped SUBTOTAL
tests/test_presigned_url.py 1 6 0 7
tests/test_centralized_auth.py 11 5 0 16
tests/test_audit_service.py 2 1 3 6
tests/test_data_upload.py 5 3 1 9
tests/test_dbgap.py 4 0 1 5
tests/test_google_data_access.py 0 1 0 1
TOTAL 23 16 5 44

Test summary after rerunning failed integration tests

filepath failed SUBTOTAL
tests/test_presigned_url.py 6 6
tests/test_data_upload.py 3 3
tests/test_centralized_auth.py 5 5
tests/test_google_data_access.py 1 1
tests/test_audit_service.py 1 1
TOTAL 16 16

Please find the detailed integration test report here

Please find the detailed integration test report after rerunning failed tests here

Please find the Github Action logs here

@github-actions
Copy link
Copy Markdown

Integration Tests

Test summary after running integration tests

filepath passed failed skipped SUBTOTAL
tests/test_presigned_url.py 7 0 0 7
tests/test_centralized_auth.py 8 8 0 16
tests/test_audit_service.py 2 1 3 6
tests/test_data_upload.py 7 1 1 9
tests/test_dbgap.py 4 0 1 5
tests/test_google_data_access.py 1 0 0 1
TOTAL 29 10 5 44

Test summary after rerunning failed integration tests

filepath failed SUBTOTAL
tests/test_data_upload.py 1 1
tests/test_audit_service.py 1 1
tests/test_centralized_auth.py 8 8
TOTAL 10 10

Please find the detailed integration test report here

Please find the detailed integration test report after rerunning failed tests here

Please find the Github Action logs here

@github-actions
Copy link
Copy Markdown

Integration Tests

Test summary after running integration tests

filepath passed failed skipped SUBTOTAL
tests/test_presigned_url.py 7 0 0 7
tests/test_centralized_auth.py 8 8 0 16
tests/test_audit_service.py 2 1 3 6
tests/test_data_upload.py 7 1 1 9
tests/test_dbgap.py 4 0 1 5
tests/test_google_data_access.py 1 0 0 1
TOTAL 29 10 5 44

Test summary after rerunning failed integration tests

filepath failed SUBTOTAL
tests/test_data_upload.py 1 1
tests/test_audit_service.py 1 1
tests/test_centralized_auth.py 8 8
TOTAL 10 10

Please find the detailed integration test report here

Please find the detailed integration test report after rerunning failed tests here

Please find the Github Action logs here

@github-actions
Copy link
Copy Markdown

Integration Tests

Test summary after running integration tests

filepath passed failed skipped SUBTOTAL
tests/test_presigned_url.py 7 0 0 7
tests/test_centralized_auth.py 8 8 0 16
tests/test_audit_service.py 2 1 3 6
tests/test_data_upload.py 8 0 1 9
tests/test_dbgap.py 4 0 1 5
tests/test_google_data_access.py 1 0 0 1
TOTAL 30 9 5 44

Test summary after rerunning failed integration tests

filepath failed SUBTOTAL
tests/test_centralized_auth.py 8 8
tests/test_audit_service.py 1 1
TOTAL 9 9

Please find the detailed integration test report here

Please find the detailed integration test report after rerunning failed tests here

Please find the Github Action logs here

@github-actions
Copy link
Copy Markdown

Integration Tests

Test summary after running integration tests

filepath passed failed skipped SUBTOTAL
tests/test_presigned_url.py 7 0 0 7
tests/test_centralized_auth.py 13 3 0 16
tests/test_audit_service.py 2 1 3 6
tests/test_data_upload.py 8 0 1 9
tests/test_dbgap.py 4 0 1 5
tests/test_study_viewer.py 3 0 0 3
tests/test_google_data_access.py 1 0 0 1
TOTAL 38 4 5 47

Test summary after rerunning failed integration tests

filepath failed SUBTOTAL
tests/test_centralized_auth.py 3 3
tests/test_audit_service.py 1 1
TOTAL 4 4

Please find the detailed integration test report here

Please find the detailed integration test report after rerunning failed tests here

Please find the Github Action logs here

@github-actions
Copy link
Copy Markdown

github-actions Bot commented Jun 2, 2026

Integration Tests

Test summary after running integration tests

filepath passed failed error skipped SUBTOTAL
tests/test_oauth2.py 15 0 0 0 15
tests/test_gen3_workflow.py 27 0 0 2 29
tests/test_dicom_viewer.py 4 0 0 0 4
tests/test_centralized_auth.py 13 3 0 0 16
tests/test_graph_submit_and_query.py 13 0 0 1 14
tests/test_audit_service.py 3 0 0 3 6
tests/test_data_upload.py 4 4 0 1 9
tests/test_presigned_url.py 7 0 0 0 7
tests/test_requestor.py 6 0 0 0 6
tests/test_dbgap.py 3 1 0 1 5
tests/test_user_token.py 5 0 0 0 5
tests/test_drs_endpoint.py 4 0 0 0 4
tests/test_user_data_library.py 2 0 0 2 4
tests/test_user_login_activation.py 2 0 0 1 3
tests/test_pfb_export.py 1 0 0 0 1
tests/test_study_viewer.py 3 0 0 0 3
tests/test_guppy_service.py 10 0 0 0 10
tests/test_login_page.py 2 0 0 0 2
tests/test_fence_admin.py 2 0 0 0 2
tests/test_oidc_client.py 1 1 0 0 2
tests/test_register_user.py 2 0 0 0 2
tests/test_homepage.py 1 0 0 0 1
tests/test_client_credentials.py 1 0 0 0 1
tests/test_manifest_service.py 1 0 0 0 1
tests/test_workspace.py 1 0 0 0 1
tests/test_google_data_access.py 1 0 0 0 1
tests/test_gen3client.py 1 0 0 0 1
tests/test_discoverypage.py 0 1 1 0 2
tests/test_aggregate_mds.py 0 1 0 0 1
tests/test_ras_authn.py 0 0 0 3 3
tests/test_etl.py 0 0 0 1 1
tests/test_gen3ff_landing_page.py 0 0 0 2 2
tests/test_env_sanity.py 0 0 0 1 1
TOTAL 135 11 1 18 165

Test summary after rerunning failed integration tests

filepath passed failed error SUBTOTAL
tests/test_aggregate_mds.py 0 1 0 1
tests/test_discoverypage.py 0 1 1 2
tests/test_centralized_auth.py 0 3 0 3
tests/test_data_upload.py 0 4 0 4
tests/test_dbgap.py 0 1 0 1
tests/test_oidc_client.py 1 0 0 1
TOTAL 1 10 1 12

Please find the detailed integration test report here

Please find the detailed integration test report after rerunning failed tests here

Please find the Github Action logs here

@github-actions
Copy link
Copy Markdown

github-actions Bot commented Jun 2, 2026

Integration Tests

Test summary after running integration tests

filepath passed failed error skipped SUBTOTAL
tests/test_dbgap.py 3 1 0 1 5
tests/test_aggregate_mds.py 0 1 0 0 1
tests/test_discoverypage.py 0 1 1 0 2
tests/test_centralized_auth.py 16 0 0 0 16
TOTAL 19 3 1 1 24

Test summary after rerunning failed integration tests

filepath failed error SUBTOTAL
tests/test_aggregate_mds.py 1 0 1
tests/test_discoverypage.py 1 1 2
tests/test_dbgap.py 1 0 1
TOTAL 3 1 4

Please find the detailed integration test report here

Please find the detailed integration test report after rerunning failed tests here

Please find the Github Action logs here

@github-actions
Copy link
Copy Markdown

github-actions Bot commented Jun 2, 2026

Integration Tests

Test summary after running integration tests

filepath failed error SUBTOTAL
tests/test_gen3_sdk.py 1 0 1
tests/test_aggregate_mds.py 1 0 1
tests/test_discoverypage.py 1 1 2
TOTAL 3 1 4

Test summary after rerunning failed integration tests

filepath failed error SUBTOTAL
tests/test_gen3_sdk.py 1 0 1
tests/test_aggregate_mds.py 1 0 1
tests/test_discoverypage.py 1 1 2
TOTAL 3 1 4

Please find the detailed integration test report here

Please find the detailed integration test report after rerunning failed tests here

Please find the Github Action logs here

@github-actions
Copy link
Copy Markdown

github-actions Bot commented Jun 2, 2026

Integration Tests

Test summary after running integration tests

filepath passed failed SUBTOTAL
tests/test_gen3_sdk.py 0 1 1
tests/test_discoverypage.py 0 1 1
tests/test_aggregate_mds.py 1 0 1
TOTAL 1 2 3

Test summary after rerunning failed integration tests

filepath failed SUBTOTAL
tests/test_gen3_sdk.py 1 1
tests/test_discoverypage.py 1 1
TOTAL 2 2

Please find the detailed integration test report here

Please find the detailed integration test report after rerunning failed tests here

Please find the Github Action logs here

@github-actions
Copy link
Copy Markdown

github-actions Bot commented Jun 2, 2026

Integration Tests

filepath passed SUBTOTAL
tests/test_gen3_sdk.py 1 1
tests/test_aggregate_mds.py 1 1
tests/test_discoverypage.py 1 1
TOTAL 3 3

Please find the detailed integration test report here

Please find the Github Action logs here

@github-actions
Copy link
Copy Markdown

github-actions Bot commented Jun 2, 2026

Integration Tests

Test summary after running integration tests

filepath failed SUBTOTAL
tests/test_gen3_sdk.py 1 1
TOTAL 1 1

Test summary after rerunning failed integration tests

filepath failed SUBTOTAL
tests/test_gen3_sdk.py 1 1
TOTAL 1 1

Please find the detailed integration test report here

Please find the detailed integration test report after rerunning failed tests here

Please find the Github Action logs here

@github-actions
Copy link
Copy Markdown

github-actions Bot commented Jun 2, 2026

Integration Tests

filepath passed SUBTOTAL
tests/test_gen3_sdk.py 1 1
TOTAL 1 1

Please find the detailed integration test report here

Please find the Github Action logs here

@github-actions
Copy link
Copy Markdown

github-actions Bot commented Jun 2, 2026

Integration Tests

filepath passed SUBTOTAL
tests/test_gen3_sdk.py 1 1
TOTAL 1 1

Please find the detailed integration test report here

Please find the Github Action logs here

@github-actions
Copy link
Copy Markdown

github-actions Bot commented Jun 2, 2026

Integration Tests

Test summary after running integration tests

filepath passed failed skipped SUBTOTAL
tests/test_gen3_workflow.py 27 1 1 29
tests/test_oauth2.py 15 0 0 15
tests/test_dicom_viewer.py 4 0 0 4
tests/test_centralized_auth.py 16 0 0 16
tests/test_graph_submit_and_query.py 13 0 1 14
tests/test_audit_service.py 3 0 3 6
tests/test_data_upload.py 8 0 1 9
tests/test_presigned_url.py 7 0 0 7
tests/test_requestor.py 6 0 0 6
tests/test_pfb_export.py 1 0 0 1
tests/test_dbgap.py 3 1 1 5
tests/test_guppy_service.py 10 0 0 10
tests/test_user_data_library.py 2 0 2 4
tests/test_drs_endpoint.py 4 0 0 4
tests/test_study_viewer.py 3 0 0 3
tests/test_user_login_activation.py 2 0 1 3
tests/test_user_token.py 4 1 0 5
tests/test_fence_admin.py 2 0 0 2
tests/test_login_page.py 2 0 0 2
tests/test_register_user.py 2 0 0 2
tests/test_aggregate_mds.py 1 0 0 1
tests/test_oidc_client.py 1 1 0 2
tests/test_gen3client.py 1 0 0 1
tests/test_manifest_service.py 1 0 0 1
tests/test_google_data_access.py 1 0 0 1
tests/test_homepage.py 1 0 0 1
tests/test_gen3_sdk.py 1 0 0 1
tests/test_workspace.py 1 0 0 1
tests/test_client_credentials.py 1 0 0 1
tests/test_ras_authn.py 0 0 3 3
tests/test_gen3ff_landing_page.py 0 0 2 2
tests/test_env_sanity.py 0 0 1 1
tests/test_etl.py 0 0 1 1
tests/test_discoverypage.py 0 1 0 1
TOTAL 143 5 17 165

Test summary after rerunning failed integration tests

filepath passed failed SUBTOTAL
tests/test_user_token.py 1 0 1
tests/test_discoverypage.py 1 0 1
tests/test_oidc_client.py 1 0 1
tests/test_dbgap.py 0 1 1
tests/test_gen3_workflow.py 0 1 1
TOTAL 3 2 5

Please find the detailed integration test report here

Please find the detailed integration test report after rerunning failed tests here

Please find the Github Action logs here

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

1 participant