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Executable scripts used for intron-retention, phosphoproteomics, ChIP-seq, and biomarker analysis.

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Julian LA, Crozier L, Lukow D, et al. On-target toxicity limits the efficacy of CDK11 inhibition against cancers with 1p36 deletions. Preprint. bioRxiv. 2025;2025.08.03.668359. Published 2025 Aug 3. doi:10.1101/2025.08.03.668359

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Scripts used in the CDK11 project including RNA-seq, intron-retention, phosphoproteomics, and Depmap data analysis.

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