Support code for analyses of Gut Virome (method comparison and colorectal cancer project). Descriptions of individual pipelines are within each pipelines individual folder.
For those interested in seeing how figures and analyses were performed for the following paper: A Comparison of Methods for the Optimal Recovery of the Human Fecal Virome
Please check out figs/methods_data/final_figures.ipynb
The scripts used to process the samples are mostly contained in src/SeqScreenPipeline