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PulseHeart-PyTorch

Article

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https://www.mdpi.com/2075-4418/14/13/1439

General Flow Chart

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Instructions for interested researcher

create datasets

  • download and rename void-movienet_50f directory as movienet_50f
  • download and rename void-npef_movienet_50f directory as npef_movienet_50f
  • delete "delete_me_after loading _videos.txt" files in last-level subdirectories
  • download and use "create_dataset" notebooks

download and run training notebooks

  • a csv file per notebook will be created: take care to give it a suitable experiment name

obtain loss and accuracy train/val curves

  • download and open movinet_loss_curves.xlsx
  • duplicate one of the folder, give it the experiment name
  • copy/paste the printed training output in the first cell, and that's all!

calculate metrics and plot graphs of ROC / PR curves

  • download echocg_video_metrics_and_graphs notebook
  • modifying the adhoc cells, downlad as pandas dataframes the csv files that were created by traning notebooks
  • adapt the model dictionnaries to take into account your choice of experiments
  • run remaining cells

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video classification for left ventricular ejection fraction by echocardiography

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