chore(deps): bump the python-app-and-dev group in /Meshflow with 3 updates

[dependabot]

Updates the requirements on django-allauth, h3 and tifffile to permit the latest version.
Updates django-allauth to 65.18.0

Commits

• See full diff in compare view

Updates h3 to 4.5.0

Release notes

Sourced from h3's releases.

v4.5.0

[4.5.0] - 2026-05-29

• Update h3lib to v4.5.0 release (#491)
• cells_to_h3shape/cells_to_geo now handle all valid cell sets, including sets that would produce global polygons crossing the antimeridian, poles, or are larger than a hemisphere
  • Duplicate cells now raise H3DuplicateInputError
  • Mixed-resolution cells now raise H3ResMismatchError
  • Internal: switch from linked-list to array-based C API for cells-to-polygon conversion
• Update h3lib with draft v4.5 changes
• Drop Python 3.8 and 3.9 (EOL); minimum is now Python 3.10
• Document Python 3.14 support
• Migrate build tooling from Makefile/pip to justfile/uv, including CI

Changelog

Sourced from h3's changelog.

[4.5.0] - 2026-05-29

• Final v4.5 release includes all v4.5.x changes below

[4.5.0a3] - 2026-05-22

• Update h3lib to v4.5.0 release (#491)

[4.5.0a2] - 2026-02-27

• cells_to_h3shape/cells_to_geo now handle all valid cell sets, including sets that would produce global polygons crossing the antimeridian, poles, or are larger than a hemisphere
  • Duplicate cells now raise H3DuplicateInputError
  • Mixed-resolution cells now raise H3ResMismatchError
  • Internal: switch from linked-list to array-based C API for cells-to-polygon conversion

[4.5.0a1] - 2026-02-25

• Update h3lib with draft v4.5 changes
• Drop Python 3.8 and 3.9 (EOL); minimum is now Python 3.10
• Document Python 3.14 support
• Migrate build tooling from Makefile/pip to justfile/uv, including CI

[4.4.2] - 2026-01-29

• Check for error from cellsToLinkedMultiPolygon (#477)

[4.4.1] - 2025-12-15

• Fix PyPI publishing issue (#474)

[4.4.0] - 2025-12-12 (never published on PyPI)

• Update h3lib to v4.4.1. (#470)
  • Add new error codes:
    • H3IndexInvalidError
    • H3BaseCellDomainError
    • H3DigitDomainError
    • H3DeletedDigitError
  • Add new functions:
    • is_valid_index
    • get_index_digit
    • construct_cell
    • deconstruct_cell

[4.3.1] - 2025-08-10

• Build wheels for Windows on ARM64 (#463)

[4.3.0] - 2025-06-17

... (truncated)

Commits

• 2883945 Merge pull request #492 from uber/jb/4.5.0
• a663439 Prep for v4.5.0 release
• 40910c1 prep for v4.5.0a3 (#491)
• f175d06 updates readme.md clone instructions (#489)
• 13c17b5 make docstring reflect what the function does (#486)
• adba976 v4.5.0a2 (#484)
• 9a7d6df v4.5a (alpha version) (#483)
• 4d0c332 Upgrade GitHub Actions to latest versions (#480)
• 3355f53 Upgrade GitHub Actions for Node 24 compatibility (#479)
• 2608414 prep for v4.4.2 release (#478)
• Additional commits viewable in compare view

Updates tifffile to 2026.6.1

Release notes

Sourced from tifffile's releases.

v2026.6.1

Read and write TIFF files

Tifffile is a comprehensive Python library to

1. store NumPy arrays in TIFF (Tagged Image File Format) files, and
2. read image and metadata from TIFF-like files used in bioimaging.

Image and metadata can be read from TIFF, BigTIFF, OME-TIFF, GeoTIFF, Adobe DNG, ZIF (Zoomable Image File Format), MetaMorph STK, Zeiss LSM, ImageJ hyperstack, Micro-Manager MMStack and NDTiff, SGI, NIHImage, Olympus FluoView and SIS, ScanImage, Molecular Dynamics GEL, Aperio SVS, Leica SCN, Roche BIF, PerkinElmer QPTIFF (QPI, PKI), Hamamatsu NDPI, Argos AVS, Philips DP, and ThermoFisher EER formatted files.

Image data can be read as NumPy arrays or Zarr arrays/groups from strips, tiles, pages (IFDs), SubIFDs, higher order series, and pyramidal levels.

Image data can be written to TIFF, BigTIFF, OME-TIFF, and ImageJ hyperstack compatible files in multi-page, volumetric, pyramidal, memory-mappable, tiled, predicted, or compressed form.

Many compression and predictor schemes are supported via the imagecodecs library, including LZW, PackBits, Deflate, CCITT, PIXTIFF, LZMA, LERC, Zstd, JPEG (8 and 12-bit, lossless), JPEG 2000, JPEG XR, JPEG XL, WebP, PNG, EER, Jetraw, 24-bit floating-point, and horizontal differencing.

Tifffile can also be used to inspect TIFF structures, read image data from multi-dimensional file sequences, write fsspec ReferenceFileSystem for TIFF files and image file sequences, patch TIFF tag values, and parse many proprietary metadata formats.

Changes

• Replace NullContext with contextlib.nullcontext (breaking).
• Fix writing monochrome linear_raw (#328).
• Fix keyboard axis selection in imshow interactive viewer (#327).
• Fix reading short ASCII string tag values from NDPI.
• Add option to suppress writing extrasamples tag.
• Verify origin of codecs.

Changelog

Sourced from tifffile's changelog.

2026.6.1

• Replace NullContext with contextlib.nullcontext (breaking).
• Fix writing monochrome linear_raw (#328).
• Fix keyboard axis selection in imshow interactive viewer (#327).
• Fix reading short ASCII string tag values from NDPI.
• Add option to suppress writing extrasamples tag.
• Verify origin of codecs.

2026.5.15

• Update ZarrFileSequenceStore to zarr format 3 (breaking).
• Derive ZarrFileSequenceStore dimension names from FileSequence.dims.
• Add option to override dimension names in zarr stores.
• Add support for Python 3.15.

2026.5.2

• Change TiffFile.series from list to callable TiffSeries sequence (breaking).
• Remove TiffPageSeries squeeze dual-state (breaking).
• Remove TiffPageSeries.get_shape, get_axes, and get_coords (breaking).
• Remove ZarrTiffStore squeeze parameter (breaking).
• Update ZarrTiffStore to zarr format 3 and multiscales to NGFF 0.5 (breaking).
• Update multiscales zarr format 2 fsspec files to NGFF 0.4 (breaking).
• Remove generic TiffPage coords (breaking).
• Change dims and sizes to use single-char axis codes (breaking).
• Add zarr format 3 compatible Tiff codec.
• Add asxarray methods to TiffFile, TiffPage, TiffPageSeries (requires xarray).
• Add geotiff kind of TiffPageSeries.
• Add mpp and coord_offsets/scales/units properties to TiffPageSeries.
• Add attrs property to TiffPage and TiffPageSeries.
• Add kind and squeeze parameters to memmap.
• Add kind parameter to imwrite and TiffFile; deprecate ome, imagej, shaped.
• Add return_as parameter to imread; deprecate aszarr.
• Fix writing TIFF trees (#326).
• Fix wrong TiffTagRegistry entries (#323).
• Implement TiffPageSeries.coords property.
• Deprecate kwargs to FileSequence.asarray; use imreadargs.
• Require zarr>=3.2.0 for zarr support.
• Drop support for numpy 2.0 (SPEC0, #324).

2026.4.11

• Add option to write zarr format 3 fsspec reference file system.
• Support reading TIFF with embedded C2PA manifest.
• Sync API of imagecodecs fallback implementations (#320).
• Do not use defusedxml.
• Drop support for Python 3.11.

2026.3.3

... (truncated)

Commits

• 83b0db6 Release v2026.6.1
• b6284a6 Update CHANGES.rst
• 803b29d Update setup.py
• 86708ca Update MANIFEST.in
• e2754ae Update tifffile/zarr.py
• 3c2a774 Update tifffile/numcodecs.py
• 00dc501 Update tifffile/tifffile.py
• b5383df Update tests/test_tifffile.py
• 2cc2d18 Remove docs/make.py
• fb65ca6 Remove docs/_static/custom.css
• Additional commits viewable in compare view

Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting @dependabot rebase.

---

Dependabot commands and options

You can trigger Dependabot actions by commenting on this PR:

• @dependabot rebase will rebase this PR
• @dependabot recreate will recreate this PR, overwriting any edits that have been made to it
• @dependabot show <dependency name> ignore conditions will show all of the ignore conditions of the specified dependency
• @dependabot ignore <dependency name> major version will close this group update PR and stop Dependabot creating any more for the specific dependency's major version (unless you unignore this specific dependency's major version or upgrade to it yourself)
• @dependabot ignore <dependency name> minor version will close this group update PR and stop Dependabot creating any more for the specific dependency's minor version (unless you unignore this specific dependency's minor version or upgrade to it yourself)
• @dependabot ignore <dependency name> will close this group update PR and stop Dependabot creating any more for the specific dependency (unless you unignore this specific dependency or upgrade to it yourself)
• @dependabot unignore <dependency name> will remove all of the ignore conditions of the specified dependency
• @dependabot unignore <dependency name> <ignore condition> will remove the ignore condition of the specified dependency and ignore conditions

[pskillen]

@dependabot rebase

[dependabot]

Looks like these dependencies are updatable in another way, so this is no longer needed.