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@STARInformatics STAR Informatics / Delphinai Corporation

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    25 repositories

    • starinformatics.github.io

      Public
      Web site for STARInformatics
      Creative Commons Zero v1.0 Universal
      •0•0•0•1•Updated May 13, 2026May 13, 2026

    • TestHarness

      Public
      Fork of SRI TestHarness
      Python
      •2•0•0•0•Updated May 17, 2024May 17, 2024

    • Tests

      Public
      Fork of Translator 'tests'
      2•0•0•0•Updated Oct 17, 2023Oct 17, 2023

    • ReasonerAPI

      Public
      NCATS Biomedical Translator Reasoners Standard API
      Python
      •29•0•0•0•Updated Sep 14, 2023Sep 14, 2023

    • OperationsAndWorkflows

      Public
      A repo for the nascent "operations and workflow" language
      Python
      •5•0•0•0•Updated May 13, 2023May 13, 2023

    • biomed-workbench

      Public
      JavaScript
      •
      MIT License
      •0•0•5•33•Updated Jan 3, 2023Jan 3, 2023

    • translator_extensions

      Public
      The Translator-specific metadata extensions used in SmartAPI registry
      4•0•0•0•Updated Nov 28, 2022Nov 28, 2022

    • semanticscience

      Public
      The Semanticscience Integrated Ontology (SIO) provides a simple, integrated ontology of types and relations for rich description of objects, processes and their…
      HTML
      •12•0•0•0•Updated May 30, 2022May 30, 2022

    • beacon-aggregator

      Public
      A web service that operates over the Beacon network to provide a single software interface over the all the Beacons
      Java
      •
      Other
      •1•0•0•3•Updated May 20, 2022May 20, 2022

    • s3-tar

      Public
      Stream s3 data into a tar file in s3
      Python
      •
      MIT License
      •11•0•0•0•Updated Aug 31, 2021Aug 31, 2021

    • kgx

      Public
      KGX is a Python library for exchanging Knowledge Graphs
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •39•0•0•0•Updated Jun 12, 2021Jun 12, 2021

    • linkml

      Public
      Linked Open Data Modeling Language
      Python
      •
      Creative Commons Zero v1.0 Universal
      •176•0•0•0•Updated Apr 23, 2021Apr 23, 2021

    • connexion

      Public
      Swagger/OpenAPI First framework for Python on top of Flask with automatic endpoint validation & OAuth2 support
      Python
      •
      Other
      •784•0•0•0•Updated Mar 12, 2021Mar 12, 2021

    • biolinkml

      Public
      Biolink modeling language
      Python
      •
      Creative Commons Zero v1.0 Universal
      •12•0•0•0•Updated Dec 18, 2020Dec 18, 2020

    • igv.js-flask

      Public
      Example project for integrating igv.js and flask
      Python
      •
      MIT License
      •15•0•0•0•Updated Apr 6, 2020Apr 6, 2020

    • translator-testing-framework

      Public
      A testing framework for Translator using tests written in Behave
      Gherkin
      •
      BSD 3-Clause "New" or "Revised" License
      •14•0•0•0•Updated Dec 25, 2019Dec 25, 2019

    • workflow-service

      Public
      Implementation of the GA4GH Workflow Execution Service, a REST service for running workflows
      Python
      •
      Apache License 2.0
      •21•0•0•0•Updated Nov 15, 2019Nov 15, 2019

    • ontobio

      Public
      python library for working with ontologies and ontology associations
      Jupyter Notebook
      •
      BSD 3-Clause "New" or "Revised" License
      •33•0•0•0•Updated Oct 19, 2019Oct 19, 2019

    • wikidata-beacon

      Public
      Wikidata Semantic Query API
      Python
      •6•0•0•0•Updated Oct 18, 2019Oct 18, 2019

    • mediKanren

      Public
      Proof-of-concept for reasoning over the SemMedDB knowledge base, using miniKanren + heuristics + indexing.
      Scheme
      •
      MIT License
      •53•1•0•0•Updated May 23, 2019May 23, 2019

    • ncats-reasoner-api

      Public
      NCATS reasoner placeholder repo
      Java
      •0•0•0•0•Updated Aug 10, 2018Aug 10, 2018

    • GenomeD3Plot

      Public
      SVG based genome viewer written in javascript using D3
      JavaScript
      •
      GNU General Public License v2.0
      •26•0•0•0•Updated Jun 14, 2018Jun 14, 2018

    • BrAPI_GenesysSunflower

      Public
      Using Breeding API with Sunflower
      0•0•0•0•Updated May 25, 2018May 25, 2018

    • cropportal

      Public
      HTML
      •
      MIT License
      •0•0•0•0•Updated Jul 25, 2017Jul 25, 2017

    • equivalent-concept-clique

      Public
      NCATS Translator Knowledge Bio Equivalent Concept Clique Compilation Microservice
      Java
      •
      MIT License
      •0•0•0•0•Updated Jun 20, 2017Jun 20, 2017
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