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    16 repositories

    • split-flow

      Public
      Jupyter Notebook
      •0•1•0•0•Updated May 10, 2026May 10, 2026

    • ecdna-fish-bladder-cancer

      Public
      Analysis of FISH microscopy images for ecDNA detection in bladder cancer
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Apr 30, 2026Apr 30, 2026

    • HetChrom_activation

      Public
      R
      •0•0•0•0•Updated Feb 3, 2026Feb 3, 2026

    • RWireX

      Public
      R
      •
      MIT License
      •1•10•0•0•Updated Jan 22, 2026Jan 22, 2026

    • ACDC-Microscopy

      Public
      Collection of scripts used for Preprocessing and Analysis of padFISH and Immunofluorescence (IF) data sets in the study "Two different chromatin modules regulat…
      Jupyter Notebook
      •0•0•0•0•Updated Dec 15, 2025Dec 15, 2025

    • padFISH

      Public
      Collection of scripts used for Preprocessing of and analysis of padFISH data sets
      Jupyter Notebook
      •0•1•0•0•Updated Dec 3, 2025Dec 3, 2025

    • MBEN

      Public
      Jupyter Notebook
      •
      GNU Affero General Public License v3.0
      •0•3•0•0•Updated May 8, 2025May 8, 2025

    • MLL-EDC4

      Public
      0•0•0•0•Updated Oct 23, 2023Oct 23, 2023

    • TurboATAC

      Public
      HTML
      •
      MIT License
      •0•0•0•0•Updated Sep 13, 2023Sep 13, 2023

    • RWire-IFN

      Public
      Scripts for co-regulation analysis of scATAC-seq data
      R
      •0•0•0•0•Updated Jan 31, 2023Jan 31, 2023

    • NSSQ

      Public
      Spot segmentation and quantification on fluorescence microscopy images
      0•0•0•0•Updated Mar 15, 2022Mar 15, 2022

    • NSQFRAP

      Public
      Quantification of FRAP experiments of binding site clusters
      0•0•0•0•Updated Mar 15, 2022Mar 15, 2022

    • RRMM

      Public
      Data analysis scripts for scRNA-seq analysis of relapsed and refractory multiple myeloma
      HTML
      •2•10•0•0•Updated Sep 27, 2021Sep 27, 2021

    • ALT-FISH

      Public
      Script collection for the automated analysis of ALT-FISH image data.
      R
      •0•0•0•0•Updated Jun 7, 2021Jun 7, 2021

    • Chromocenters

      Public
      R
      •0•0•0•0•Updated May 12, 2021May 12, 2021

    • Optodroplets

      Public
      R
      •1•0•0•0•Updated May 5, 2021May 5, 2021
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