v0.7.1

Added

• Build Python 3.14 wheels (#109)

Fixed

• Add missing id, seq, and qual attributes of the Record class to the Python stub file (#106)
• Fix multiline comment in python.rs module (#107)

Thanks @apcamargo! 🎉

v0.7.0

Added

• Add the phred_quality_score method to the Python Record class (#98)
• Add Phred decoding functionality (#102)

v0.6.3

• sdist (source) wheels are now pushed to PyPI
• Maturin Docker container is now used to generate manylinux-compliant wheels

v0.6.2

v0.6.2 contains backwards-compatible enhancements to the Python library (thanks @apcamargo!):

• Add new dunder methods (__hash__, __eq__, __len__, __str__, and __repr__) to needletail.Record
• needletail.Record instances can now be created directly
• record.normalize() now takes iupac argument (default=False)
• parse_fastx_file can now take a pathlib.Path

v0.6.1

• Add position method to return current line number and byte offset of parser (thanks @olliecheng)

v0.6.0

• Tests are now included in the crate (thanks @mr-c)
• Individual compression algos can be included, rather than all or nothing (thanks @jguhlin)
• Updated dependencies and test optimizations (thanks @mo8it)

v0.3.0

Added

• Improved error reporting (i.e., a parse failure now gives the record it failed on).
• Significant code cleanup and additional linting (cargo clippy).
• Significant additional test coverage, including via fuzzing.
• Significant improvements to library documentation.

Changed

• The .kmers method has been simplified and a new .canonical_kmers method has been introduced with much of the original's functionality.
• Added parse_sequence_reader, which replaces fastx_stream and fastx_bytes.
• fastx_cli updated and renamed to parse_sequence_path.
• SeqRecord is now SequenceRecord and many of its methods are now in the Sequence trait (e.g., working on byte slices).
• Automatic decompression now takes Read instead of Read + Seek so we can handle e.g. gzip files piped in through stdin.
• See this link for additional details on updating code to v0.3.0.

Removed

• Single-file zip handling (zip requires Seek) 😞