chore: introduce tool-versions.json as a central registry for all build tool versions #1732
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Introduce `tool-versions.json` as a central registry for all build tool versions used in the Docker development environment. This consolidates version management that was previously scattered across Dockerfile ARGs, .nvmrc, rust-toolchain.toml, Cargo.toml, and package.json. The new `scripts/get-version` script reads versions from the registry, supporting both simple string values and complex file references that extract versions from existing config files (e.g., reading Node.js version from .nvmrc, Rust version from rust-toolchain.toml). Benefits: - Single source of truth for tool versions - Easier to audit and update dependencies - Avoids duplication - references authoritative sources where versions are already defined (npm packages, Cargo deps, toolchain files) - Dockerfile is cleaner without hardcoded version ARGs Co-Authored-By: Claude <noreply@anthropic.com>
Co-Authored-By: Claude <noreply@anthropic.com>
- Replace hardcoded tool versions with ./scripts/get-version calls - Add git-cliff to tool-versions.json - Affects cli.yml, web.yml, bioconda.yml workflows Co-Authored-By: Claude <noreply@anthropic.com>
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Co-Authored-By: Claude <noreply@anthropic.com>
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./tool-versions.jsonas a central registry for all build tool versions./scripts/get-versionscript to resolve versions from the registry./scripts/get-versioninstead of hardcoded versions