Consolidate pending apps.json updates

[github-actions]

apps.json Queue Consolidation

Base branch: main
Target file: neurodesk/apps.json

PR Processing Order

• Update apps.json from neurocontainers releases #714 (2026-06-13T04:51:20Z): Update apps.json from neurocontainers releases

Final Tool Winners

• hdbet -> Update apps.json from neurocontainers releases #714

Source PRs Closed By Consolidation

• Update apps.json from neurocontainers releases #714: Update apps.json from neurocontainers releases

Consolidated PR State

• A consolidated PR is required because queue output differs from main.

Proposed apps.json Changes

--- a/neurodesk/apps.json
+++ b/neurodesk/apps.json
@@ -1356,7 +1356,7 @@
                 "exec": ""
             },
             "hdbet 2.0.1": {
-                "version": "20260605",
+                "version": "20260612",
                 "exec": "",
                 "apptainer_args": []
             }

[github-actions]

Proposed apps.json changes

Latest queue consolidation diff for neurodesk/apps.json:

--- a/neurodesk/apps.json
+++ b/neurodesk/apps.json
@@ -1356,7 +1356,7 @@
                 "exec": ""
             },
             "hdbet 2.0.1": {
-                "version": "20260605",
+                "version": "20260612",
                 "exec": "",
                 "apptainer_args": []
             }