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create customizable PURE mixture BioCRNpyler Test #38: Commit 892bfc5 pushed by murrayrm
4m 19s pure_update-01Jan2026
pure_update-01Jan2026
4m 19s
convert parameter files to pure ASCII BioCRNpyler Test #37: Commit 8869b5d pushed by murrayrm
4m 18s parameter_update-22Nov2025
parameter_update-22Nov2025
4m 18s
add default parameter_file for enzyme mechanisms BioCRNpyler Test #36: Commit 32b4302 pushed by murrayrm
4m 21s parameter_update-22Nov2025
parameter_update-22Nov2025
4m 21s
add default parameter_file for enzyme mechanisms BioCRNpyler Test #35: Commit 087efbf pushed by murrayrm
4m 10s parameter_update-22Nov2025
parameter_update-22Nov2025
4m 10s
add (default) parameter files for txtl mechanisms BioCRNpyler Test #34: Commit 469ec28 pushed by murrayrm
4m 21s parameter_update-22Nov2025
parameter_update-22Nov2025
4m 21s
add documentation + code cleanup BioCRNpyler Test #33: Commit e18e71b pushed by murrayrm
4m 20s parameter_update-22Nov2025
parameter_update-22Nov2025
4m 20s
Add missing PURE parameters + comments for TetR BioCRNpyler Test #32: Commit 876c33e pushed by murrayrm
4m 23s parameter_update-22Nov2025
parameter_update-22Nov2025
4m 23s
add preprocessing code + simplified docstrings BioCRNpyler Test #31: Commit 3405407 pushed by murrayrm
4m 20s refmanual_updates-08Nov2025
refmanual_updates-08Nov2025
4m 20s
update docs/conf.py to avoid mathjax3 errors BioCRNpyler Test #30: Commit 0f96369 pushed by murrayrm
4m 22s refmanual_updates-08Nov2025
refmanual_updates-08Nov2025
4m 22s
Merge pull request #1 from ayush9pandey/master BioCRNpyler Test #29: Commit ffd82ea pushed by murrayrm
4m 16s refmanual_updates-08Nov2025
refmanual_updates-08Nov2025
4m 16s
clean up tutorials and remove sphinx formating/sectioning errors BioCRNpyler Test #28: Commit b2fb678 pushed by murrayrm
4m 19s refmanual_updates-08Nov2025
refmanual_updates-08Nov2025
4m 19s
add numpydoc to docs/requirements.txt BioCRNpyler Deploy #1: Commit 1a447ad pushed by murrayrm
6m 19s main
main
6m 19s
clean up tutorials and remove sphinx formating/sectioning errors BioCRNpyler Test #27: Commit f861989 pushed by murrayrm
6m 32s refmanual_updates-08Nov2025
refmanual_updates-08Nov2025
6m 32s
add information about direct simulation of CRN using bioscrape BioCRNpyler Test #26: Commit b41b527 pushed by murrayrm
4m 28s docstring_updates-14Oct2025
docstring_updates-14Oct2025
4m 28s
additional small fixes to remove sphinx warning messages BioCRNpyler Test #25: Commit 89a7811 pushed by murrayrm
4m 22s docstring_updates-14Oct2025
docstring_updates-14Oct2025
4m 22s
modify update_species(), update_reactions() summaries to reflect mech… BioCRNpyler Test #24: Commit 103ca98 pushed by murrayrm
4m 21s docstring_updates-14Oct2025
docstring_updates-14Oct2025
4m 21s
undo non-docstring changes BioCRNpyler Test #23: Commit 0f0fd42 pushed by murrayrm
4m 24s docstring_updates-14Oct2025
docstring_updates-14Oct2025
4m 24s
add ruff instruction to developer guide BioCRNpyler Test #22: Commit be79bb9 pushed by murrayrm
4m 9s code_cleanup-11Oct2025
code_cleanup-11Oct2025
4m 9s
fix species.py f-string error BioCRNpyler Test #21: Commit 98c4714 pushed by murrayrm
4m 6s code_cleanup-11Oct2025
code_cleanup-11Oct2025
4m 6s
fix long lines (code and docstrings) BioCRNpyler Test #20: Commit 8433593 pushed by murrayrm
1m 15s code_cleanup-11Oct2025
code_cleanup-11Oct2025
1m 15s
update test_parameter.py to detect Windows BioCRNpyler Test #19: Commit 320b882 pushed by murrayrm
4m 22s devcell_updates-10Sep2025
devcell_updates-10Sep2025
4m 22s
update examples to match code changes and fix bugs BioCRNpyler Test #18: Commit 8d048c8 pushed by murrayrm
4m 9s devcell_updates-10Sep2025
devcell_updates-10Sep2025
4m 9s
add linefeeds in CRN.pretty_print() BioCRNpyler Test #17: Commit 1bb29e2 pushed by murrayrm
4m 10s devcell_updates-10Sep2025
devcell_updates-10Sep2025
4m 10s
update compartment handling in MembraneChannel BioCRNpyler Test #16: Commit a8705cd pushed by murrayrm
5m 47s murrayrm-refactor_patch-2
murrayrm-refactor_patch-2
5m 47s
reformat BioCRNpyler library (API) documentation BioCRNpyler Test #15: Commit fe0ef16 pushed by murrayrm
5m 42s update_docs-12Aug2025
update_docs-12Aug2025
5m 42s