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Simple addition for an alignment length filter#4

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meren wants to merge 1 commit intojwintersinger:masterfrom
meren:master
Open

Simple addition for an alignment length filter#4
meren wants to merge 1 commit intojwintersinger:masterfrom
meren:master

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@meren meren commented Nov 6, 2018

This adds an option to remove short alignments based on number of aligned nucleotides. I've been using this for awhile.

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