FAQ

Frequently Asked Questions (FAQ)

General Questions

Q: What is PhenoQC?

A: PhenoQC is a toolkit for quality control of phenotypic data in genomic research.

Q: Who should use PhenoQC?

A: Researchers and data scientists working with phenotypic data in genomic studies.

Technical Questions

Q: What file formats does PhenoQC support?

A: PhenoQC supports CSV, TSV, and JSON file formats.

Q: How does PhenoQC handle missing data?

A: PhenoQC can detect missing data and offers imputation strategies like mean and median imputation.

Q: Can I use custom ontology mappings?

A: Yes, PhenoQC allows you to provide custom mapping files for ontology mapping.

Troubleshooting

Q: What should I do if I encounter an error?

A: Check the error message, consult the documentation, and if the issue persists, open an issue on GitHub with details about the error and steps to reproduce it.

Q: How can I update PhenoQC?

A: You can update PhenoQC using pip: pip install --upgrade phenoqc

If you have more questions, please open an issue on our GitHub repository.