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93 changes: 81 additions & 12 deletions R/doeFactorial.R
Original file line number Diff line number Diff line change
Expand Up @@ -355,22 +355,91 @@ doeFactorial <- function(jaspResults, dataset, options, ...) {
seed = seed
)
} else if (options[["factorialType"]] == "factorialTypeSpecify") {
whichHow <- strsplit(gsub(" ", "", strsplit(options[["factorialTypeSpecifyGenerators"]], ",")[[1]], fixed = TRUE), "=")
if (length(whichHow) == 0) {
entries <- unlist(strsplit(options[["factorialTypeSpecifyGenerators"]], "[,; \t\n\r]+"))
entries <- trimws(entries)
entries <- entries[nzchar(entries)]
if (length(entries) == 0)
return()

nFactors <- designSpec[["factors"]]
k <- log2(designSpec[["runs"]])
p <- nFactors - k
baseLabels <- LETTERS[seq_len(k)]
addedLabels <- LETTERS[seq_len(p) + k]

if (p == 0)
stop(gettext("The selected design is a full factorial; no generators can be specified."))

splitEntries <- strsplit(entries, "=")
hasLHS <- lengths(splitEntries) == 2L

if (any(hasLHS) && !all(hasLHS))
stop(gettext("All generators must either all include a factor name (e.g., D=ABC) or none should."))

if (all(hasLHS)) {
lhsVec <- toupper(trimws(vapply(splitEntries, `[[`, character(1L), 1L)))
rhsVec <- toupper(trimws(vapply(splitEntries, `[[`, character(1L), 2L)))

invalidLHS <- lhsVec[!lhsVec %in% addedLabels]
if (length(invalidLHS) > 0)
stop(gettextf(
"Only the final %1$s factor(s) can be defined by a generator: %2$s.",
p, paste(addedLabels, collapse = ", ")
))

if (length(entries) != p)
stop(gettextf(
"Expected %1$s generator(s) for added factor(s) %2$s, but got %3$s.",
p, paste(addedLabels, collapse = ", "), length(entries)
))

if (anyDuplicated(lhsVec)) {
dupes <- unique(lhsVec[duplicated(lhsVec)])
stop(gettextf("Factor(s) defined more than once in generators: %s.", paste(dupes, collapse = ", ")))
}

for (i in seq_along(rhsVec)) {
rhs <- sub("^[+-]", "", rhsVec[i])
unknown <- setdiff(strsplit(rhs, "")[[1]], baseLabels)
if (length(unknown) > 0)
stop(gettextf(
"Generator for %1$s references non-base or unknown factor(s): %2$s. Base factors are: %3$s.",
lhsVec[i], paste(unknown, collapse = ", "), paste(baseLabels, collapse = ", ")
))
}

gen <- rhsVec[order(match(lhsVec, addedLabels))]

} else {
rhsVec <- toupper(trimws(vapply(splitEntries, `[[`, character(1L), 1L)))

if (length(entries) != p)
stop(gettextf(
"Expected %1$s generator(s) for added factor(s) %2$s, but got %3$s.",
p, paste(addedLabels, collapse = ", "), length(entries)
))

for (i in seq_along(rhsVec)) {
rhs <- sub("^[+-]", "", rhsVec[i])
unknown <- setdiff(strsplit(rhs, "")[[1]], baseLabels)
if (length(unknown) > 0)
stop(gettextf(
"Generator %1$s references non-base or unknown factor(s): %2$s. Base factors are: %3$s.",
i, paste(unknown, collapse = ", "), paste(baseLabels, collapse = ", ")
))
}

gen <- rhsVec
}
gen <- character(length(whichHow))
for (i in seq_along(length(whichHow))) {
gen[i] <- whichHow[[i]][length(whichHow[[i]])]
}

design <- FrF2::FrF2(
nfactors = designSpec[["factors"]],
nruns = designSpec[["runs"]],
generators = gen,
ncenter = designSpec[["centerpoints"]],
replications = designSpec[["replications"]],
nfactors = designSpec[["factors"]],
nruns = designSpec[["runs"]],
generators = gen,
ncenter = designSpec[["centerpoints"]],
replications = designSpec[["replications"]],
alias.block.2fis = TRUE,
seed = seed
seed = seed
)
} else if (options[["factorialType"]] == "factorialTypeSplit") {
design <- FrF2::FrF2(
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