Search results

[Feature] OMETIFF Scene selection

Status: Open.

Feature

#385 In gustaveroussy/sopa;

· rjesud opened on Feb 12, 2026

[Bug] <code>sopa.segmentation.cellpose</code> falls back to CPU despite <code>gpu=True</code> and valid <code>torch.cuda</code> context

Status: Open.

#382 In gustaveroussy/sopa;

· rushilp7 opened on Feb 1, 2026

Stardist local model

Status: Open.

#381 In gustaveroussy/sopa;

· laurie-tonon opened on Jan 26, 2026

[Feature] Cells parquet file

Status: Open.

#379 In gustaveroussy/sopa;

· 16nikita opened on Jan 15, 2026

[Bug] Xenium explorer conversion for large PhenoCycler image

Status: Open.

Bug

#378 In gustaveroussy/sopa;

· Rayan21100 opened on Jan 13, 2026

VisiumHD: Stardist+proseg for mask checking

Status: Open.

#375 In gustaveroussy/sopa;

· KunHHE opened on Jan 6, 2026

[Feature Request] Integration of FlashDeconv for GPU-free, atlas-scale spatial deconvolution

Status: Open.

#374 In gustaveroussy/sopa;

· cafferychen777 opened on Jan 2, 2026

segmentation combine between two spatialdata objects

Status: Open.

#369 In gustaveroussy/sopa;

· PietroD opened on Dec 16, 2025

[Feature] Add numpy array mask from external tool to sopa's spatialdata

Status: Open.

#361 In gustaveroussy/sopa;

· PietroD opened on Dec 2, 2025

Issue CosMx reader and polygons

Status: Open.

#357 In gustaveroussy/sopa;

· ccruizm opened on Nov 21, 2025

[Feature] Experiment different filtering parameters during aggregation

Status: Open.

#355 In gustaveroussy/sopa;

· quentinblampey opened on Nov 14, 2025

[Feature] Singular g4x support

Status: Open.

#339 In gustaveroussy/sopa;

· derrik-gratz opened on Oct 20, 2025