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As was reported in testing on real hardware on TLVC in Mellvik/TLVC#228 and Mellvik/TLVC#229, the 16550A and subsequent UARTs require special handling of the interrupt enable register, unless the FIFO is completely read during each interrupt received.
This is because the 16650 uses level-active interrupt signaling while the 8259 PIC is configured for edge-triggered interrupt detection. Reading all the bytes from the UART receive data register per interrupt ensures that the next byte received causes an edge transition on the interrupt pin of the 16550, which fixes the UART hang bug seen.
Thanks @Mellvik for the identification and testing of this problem!