Migrate all MARSS docs to Roxygen2 (bulk .Rd → Roxygen2 conversion)#2

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Copilot wants to merge 15 commits into

copilot/convert-manual-to-roxygen2

Commits on Mar 23, 2026

Commits on Mar 24, 2026

Add GitHub Actions workflow: R CMD check + PDF manual + HTML docs artifacts

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eeholmes-uw
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Remove GitHub Actions workflow; add HTML preview of CSEGriskfigure docs

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eeholmes-uw
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Add PDF preview of CSEGriskfigure documentation

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eeholmes-uw
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Batch 1: Convert CSEGtmufigure, MARSS, MARSSFisherI, MARSS_dfa, MARSS_marss, MARSS_marxss, MARSSaic, MARSSapplynames to Roxygen2

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Batch 2: Convert MARSSboot, MARSSharveyobsFI, MARSShatyt, MARSShessian, MARSShessian_numerical, MARSSinfo, MARSSinits, MARSSkem, MARSSkemcheck to Roxygen2

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Copilot
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Fix: mark MARSSharveyobsFI and MARSShessian.numerical as @keywords internal

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Add Roxygen2 documentation to MARSSinnovationsboot and stdInnov

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Add Roxygen2 documentation block for MARSSkf, MARSSkfas, MARSSkfss

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Copilot
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Add Roxygen2 documentation to MARSSoptim and MARSSparamCIs

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Batch 3: Convert MARSSinnovationsboot, stdInnov, MARSSkf, MARSSoptim, MARSSparamCIs, MARSSresiduals, MARSSresiduals.tT to Roxygen2

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Batch 3 (complete): Add MARSSresiduals_tt, MARSSresiduals_tt1 Roxygen2; delete converted Rd files
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Batch 3 finish: Convert MARSSsimulate, MARSSvectorizeparam to Roxygen2

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