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ctglab / ctgflow Public template

forked from tjbencomo/ngs-pipeline

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fix: removal of branch statement evaluation#6

Merged

danilotat merged 13 commits intomasterctglab/ctgflow:masterfrom

feat/addition_of_test_samplesctglab/ctgflow:feat/addition_of_test_samplesCopy head branch name to clipboard

Nov 17, 2025

Conversation Commits13 (13)Checks Files changed

Merged

fix: removal of branch statement evaluation#6
danilotat merged 13 commits intomasterfrom
feat/addition_of_test_samples

Commits

Commits on Nov 14, 2025

fix: removal of branch statement evaluation
danilotat
committed
feat: deepsomatic
danilotat
authored
fix: GatherBSQRReports cli commands
danilotat
authored
fix: typo
danilotat
authored

Commits on Nov 17, 2025

enh: reduction in resources request for samtools sort
danilotat
committed
fix: removal of hardcoded resources for samtools sort
danilotat
committed
feat: deepsomatic, CI running
danilotat
committed
feat: deepsomatic vcf
danilotat
committed
fix: gatherbqsr reports fix, deepsomatic vcf, temp files
danilotat
committed
feat: parameters for deepsomatic
danilotat
committed
feat: function for deepsomatic input in common
danilotat
committed
fix: function for deepsomatic input in common
danilotat
committed
fix: removal of deepsomatic testing from CI
danilotat
committed

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