Release 1.0.9

This release fixes an issue with the PEtab import if a NaN value is used in the condition table.

Release 1.0.8

This release solves an issue where the petab importer would fail when used with a COPASI wrapper generated from SWIG 4.3.

• fixes #3

Release 1.0.7

This release ensures compatibility with the upcoming COPASI 287 release.

Release 1.0.6

This release fixes an issue, when encountering parameter files without names. Additionally address some pandas future warnings.

Release 1.0.5

This release fixes a compatibility issue with libsbml (when compiled with SWIG 4).

Release 1.0.4

This release adds support for transformed observables. For this both the observable formula and the measurement data on import will be transformed. Additionally we try to resolve the noise parameters and import them as weights for the experimental data.

Release 1.0.3

This release fixes an issue, where sometimes parameter values not to be estimated were not correctly assigned. Additionally this fixes issue #2.

COPASI PEtab importer 1.0.2

This release fixes an issue where sometimes values would not be correctly set, when they were of a numpy datatype.

COPASI PEtab import 1.0.1

This release fixes an issue, where the gui was always required. The gui dependencies however are only installed when the extra [gui] was specified for installation. This release catches the import error.

copasi_petab_importer 1.0.0

First release for pypi, all code placed into submodule. After installation the two shell commands:

• copasi_petab_import: to convert a petab problem into a COPASI file from the command line
• copasi_petab_gui: to launch the graphical user interface