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Update isospecpy requirement from ~=2.2.0 to ~=2.3.2#81

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Update isospecpy requirement from ~=2.2.0 to ~=2.3.2#81
dependabot[bot] wants to merge 1 commit intodevfrom
dependabot/pip/isospecpy-approx-eq-2.3.2

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@dependabot dependabot bot commented on behalf of github Nov 17, 2025

Updates the requirements on isospecpy to permit the latest version.

Changelog

Sourced from isospecpy's changelog.

This file lists major changes between releases, for a full list see git log.

2.1.4

  • Add charge parameter in Python and R

2.1.3

  • Bugfix for large envelopes crashing under Python in specific circumstances
  • Implement stochastic envelopes in C++ and Python

2.1.2 (R-only release)

  • Workaround for CRAN threatening to remove package because of C++11 function usage, in spite of C++14 being clearly listed in SystemDependencies

2.1.1

  • Speed improvements
  • Bugfixes
  • Support for calculating basic statistics of FixedEnvelopes
  • Support for negative atom counts in formulas in Python. This is useful in conjunction with FASTA argument, to represent protein modification

2.1.0

  • Support for using nominal mass in calculations
  • FASTA file parsing
  • More speed improvements
  • Support for Wasserstein distance
  • Basic operations on fixed envelopes (addition, normalization, convolution...)

2.0.1 (R-only release)

  • Fix compilation of IsoSpecR on Windows

2.0.0

  • Major algorithmic improvements in IsoLayered
  • Added support for fixed envelopes, restored quicktrim option
  • R now returns probabilities instead of logprobabilites by default
  • Some API changes
  • Performance improvements and bugfixes all over the place

1.9.3 (C++/Python-only release)

  • Improve API and examples for radiolabelling in C++/Python

1.9.2

  • Mostly documentation improvements

... (truncated)

Commits
  • 220e766 Merge pull request #63 from lopippo/proposed_version_tag_2.3.2
  • 9908f64 Update version 2.3.2.
  • 894e9e9 This patch is no more necessary.
  • 7f261b2 Latest modifs for proposed tag 2.3.2 fixing debian packaging due to buggy dep...
  • 8b8a144 Modify version
  • a23bdce Refactor monoisotopic impl
  • 077920c Monoisotopic mass test
  • 2dbcebb Helper methods in Marginal
  • f49b238 Add helper script
  • 55eb397 Merge pull request #62 from lopippo/patch-1
  • Additional commits viewable in compare view

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Updates the requirements on [isospecpy](https://github.com/MatteoLacki/IsoSpec) to permit the latest version.
- [Changelog](https://github.com/MatteoLacki/IsoSpec/blob/main/CHANGELOG)
- [Commits](MatteoLacki/IsoSpec@v2.2.1...v2.3.2)

---
updated-dependencies:
- dependency-name: isospecpy
  dependency-version: 2.3.2
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>
@dependabot dependabot bot added dependencies Pull requests that update a dependency file python Pull requests that update python code labels Nov 17, 2025
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dependabot bot commented on behalf of github Dec 1, 2025

Superseded by #82.

@dependabot dependabot bot closed this Dec 1, 2025
@dependabot dependabot bot deleted the dependabot/pip/isospecpy-approx-eq-2.3.2 branch December 1, 2025 15:46
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