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  1. Myrio-resistance-mechanism Myrio-resistance-mechanism Public

    Code to accompany Hannay et al 2025 "Trait mapping utilizing a newly constructed genome for allohexaploid invasive Eurasian watermilfoil (Myriophyllum spicatum) reveals a non-target site QTL associ…

  2. QTL-seq QTL-seq Public

    Forked from YuSugihara/QTL-seq

    QTL-seq pipeline to identify causative mutations responsible for a phenotype in self and out-crosses

    Python

  3. filtering_functions filtering_functions Public

    my two functions I wrote for 1) filtering a VCF in R and 2) determining the clone correction cut-off you want when using Poppr

    R