Skip to content

Pull requests: biobakery/humann

New pull request New
9 Open 19 Closed
9 Open 19 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Reviews
Filter by reviews
No reviews Review required Approved review Changes requested
Assignee
Filter by who’s assigned
Assigned to nobody Loading
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Pull requests list

Parallelize diamond alignment + input decompression, compress intermediates
#73 opened Jun 4, 2026 by AlbertoLupatin Loading…
correct link in readme documentation Improvements or additions to documentation
#69 opened Aug 29, 2025 by SilasK Loading…
Fix MetaPhlAn link in Readme
#68 opened Aug 1, 2025 by simanjo Loading…
Update for MetaPhlAn 4.2 compatability
#67 opened Jun 7, 2025 by zzkt Loading…
1
Add support for a user config file
#65 opened Feb 21, 2025 by tonykew Loading…
typo in utils.py
#61 opened Apr 10, 2024 by SilasK Loading…
humann_genefamilies_genus_level: Fix a dictionary parsing and add functional test
#26 opened Apr 23, 2021 by bebatut Loading…
Lower peak memory usage with sqlite3
#21 opened Feb 11, 2021 by wbazant Loading…
2
Add --threads to bowtie-index command
#16 opened Aug 28, 2020 by aeschriefer Loading…
ProTip! Updated in the last three days: updated:>2026-06-10.