Skip to content

fMRISurface unified with NHP processing#370

Open
mmilch01 wants to merge 8 commits intomasterfrom
NHPUnifiedFMRISurface
Open

fMRISurface unified with NHP processing#370
mmilch01 wants to merge 8 commits intomasterfrom
NHPUnifiedFMRISurface

Conversation

@mmilch01
Copy link
Copy Markdown
Contributor

@mmilch01 mmilch01 commented Dec 1, 2025

FMRISurface adapted for NHP processing.

@mmilch01 mmilch01 requested review from coalsont and glasserm December 1, 2025 09:16
@mmilch01 mmilch01 changed the title Nhp unified fmri surface fMRISurface unified with NHP processing Dec 1, 2025
coalsont
coalsont reviewed Dec 2, 2025
View reviewed changes
Comment thread Examples/Scripts/GenericfMRISurfaceProcessingPipelineBatchNHP.sh Outdated
coalsont
coalsont reviewed Dec 2, 2025
View reviewed changes
Comment thread fMRISurface/scripts/SubcorticalProcessing.sh
coalsont
coalsont reviewed Dec 2, 2025
View reviewed changes
Comment thread fMRISurface/scripts/SubcorticalProcessing.sh Outdated
glasserm
glasserm reviewed Dec 2, 2025
View reviewed changes
Comment thread Examples/Scripts/GenericfMRISurfaceProcessingPipelineBatchNHP.sh Outdated
glasserm
glasserm reviewed Dec 2, 2025
View reviewed changes
Comment thread Examples/Scripts/GenericfMRISurfaceProcessingPipelineBatchNHP.sh Outdated
glasserm
glasserm reviewed Dec 2, 2025
View reviewed changes
Comment thread fMRISurface/scripts/SubcorticalProcessing.sh Outdated
glasserm
glasserm reviewed Dec 2, 2025
View reviewed changes
Comment thread Examples/Scripts/GenericfMRISurfaceProcessingPipelineBatchNHP.sh Outdated
coalsont
coalsont reviewed Dec 2, 2025
View reviewed changes
Comment thread fMRISurface/scripts/SubcorticalProcessing.sh Outdated
coalsont
coalsont reviewed Dec 9, 2025
View reviewed changes
Comment thread Examples/Scripts/GenericfMRISurfaceProcessingPipelineBatchNHP.sh Outdated
coalsont
coalsont reviewed Dec 9, 2025
View reviewed changes
Comment thread fMRISurface/scripts/SubcorticalProcessing.sh
mmilch01 pushed a commit that referenced this pull request Dec 10, 2025
+address reviewer comments
78613ea 
#370 (comment)
#370 (comment)
mmilch01 pushed a commit that referenced this pull request Apr 13, 2026
+address reviewer comments
1c3c48f 
#370 (comment)
#370 (comment)
@mmilch01 mmilch01 force-pushed the NHPUnifiedFMRISurface branch from 4a2a099 to eb22b5e Compare April 14, 2026 19:55
mmilch01 and others added 8 commits April 14, 2026 14:57
@mmilch01
+compared GenericfMRISUrfaceProcessingPipeline.sh, RibbonVolumeToSurf…
8b46854 
…aceMapping.sh, SurfaceSmoothing.sh, SubcorticalProcessing.sh
@mmilch01
+example NHP batch
f44675c
@mmilch01 @coalsont
Update fMRISurface/scripts/SubcorticalProcessing.sh
7289ec8 
Co-authored-by: Tim Coalson <coalsont@users.noreply.github.com>
@mmilch01 @coalsont
Update Examples/Scripts/GenericfMRISurfaceProcessingPipelineBatchNHP.sh
244c423 
Co-authored-by: Tim Coalson <coalsont@users.noreply.github.com>
@mmilch01 @coalsont
Update fMRISurface/scripts/SubcorticalProcessing.sh
9107ce9 
Co-authored-by: Tim Coalson <coalsont@users.noreply.github.com>
+Address comments:
715c09f 
https://github.com/Washington-University/HCPpipelines/pull/370/files#r2582499018
https://github.com/Washington-University/HCPpipelines/pull/370/files#r2582503918
https://github.com/Washington-University/HCPpipelines/pull/370/files#r2582955420
+address reviewer comments
7987564 
#370 (comment)
#370 (comment)
+Added command line specified arguments
66798c5
@mmilch01 mmilch01 force-pushed the NHPUnifiedFMRISurface branch from eb22b5e to 66798c5 Compare April 14, 2026 19:58
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Reviewers

@coalsont coalsont coalsont left review comments

@glasserm glasserm glasserm left review comments

Assignees

No one assigned

Labels

None yet

Projects

None yet

Milestone

No milestone

Development

Successfully merging this pull request may close these issues.

3 participants

@mmilch01 @coalsont @glasserm