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SNVs omitted from genes

Status: Open.

#220 In MrOlm/inStrain;

· padejonge opened on Feb 10, 2026

How do genomes from inStrain profile for inStrain compare?

Status: Open.

#219 In MrOlm/inStrain;

· Biofarmer opened on Jan 4, 2026

Tests missing test_backend

Status: Open.

#218 In MrOlm/inStrain;

· Hellseher opened on Oct 23, 2025

ERROR 243 is in input QMprofile.IS but not the provided stb file

bugSomething isn't workingSomething isn't working

Status: Open.

#217 In MrOlm/inStrain;

· liliancaesarbio opened on Oct 7, 2025

Running inStrain profile on a single genome

Status: Open.

#215 In MrOlm/inStrain;

· zl945 opened on Sep 17, 2025

Instrain pairing_filter

Status: Open.

#214 In MrOlm/inStrain;

· priscalim00 opened on Aug 26, 2025

Missing genomes/scaffolds in output: DEBUG FAILURE SplitException

Status: Open.

#212 In MrOlm/inStrain;

· hdore opened on Jun 19, 2025

Read pair ANI to bin genomes

Status: Open.

#208 In MrOlm/inStrain;

· adityabandla opened on Mar 24, 2025

Inconsistent values in _pooled_SNV_data.tsv

Status: Open.

#207 In MrOlm/inStrain;

· hdore opened on Feb 24, 2025

StbError and Could not cluster genomes

Status: Open.

#198 In MrOlm/inStrain;

· Swt623 opened on Dec 17, 2024

Discrepancy in gene ID mapping on same positions in different samples

bugSomething isn't workingSomething isn't working

Status: Open.

#195 In MrOlm/inStrain;

· Sidduppal opened on Oct 16, 2024

Inconsistent order of columns in output file *_genome_info.tsv

bugSomething isn't workingSomething isn't working

Status: Open.

#169 In MrOlm/inStrain;

· yunkit opened on Mar 18, 2024