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austinorr
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Apr 29, 2024
pyproject.toml
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| "cltoolbox", | ||
| "numba", | ||
| "pandas", | ||
| "pandas>=1.5,<2", |
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we should refactor all calls to df.append() since it's deprecated. use pandas.concat([df1, df2]) going forward
austinorr
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Apr 29, 2024
| requires-python = ">=3.10" | ||
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| [project.optional-dependencies] | ||
| slim = ["numba", "pandas"] |
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most of this library doesn't depend on the cli, so there can be a slim option. In fact, a better approach would be to move the dependency on cltoolbox to an optional dependency tag called cli = ["cltoolbox"].
Fixes * Allow the HDF filename to be passed to main function instead of only io_manager instance. Having main only accept io_manager broke all ipython notebooks. * Removed "print(table)" from readUCI which I think was a debugging statement. IPython Notebook Fixes * Edited some of the ipython notebooks that tried to find an element time-series with an old name, for example tried to find "SURO" instead of the new name "SURO_sum". * Edited some of the ipython notebooks so that filenames were case sensitive. Deprecations * The append function is no longer available for DataFrames and changed to pd.concat form. * In pandas 3.0, to_hdf will require the "key" to be a keyword argument instead of a positional argument and made that change now to silence the deprecation message. Format * Removed trailing spaces from some files. * Fixed not a multiple of 4 spaces indentation in at least one file. * Renamed files with spaces in their names, replacing spaces with "_". Documentation * Additional edits to the README.rst. * Reshaped some docstrings into Numpy format.
…e other action to test 3.11
Cleanup actions
…s with undefined variables, as noted in PR respec#159.
…ease, for GENER operations and outputting mean values
misc fixes... Merging this one in, will have a few touch-ups afterward to resolve this append/concat issue.
pyproject.toml -- attempt to add version dependency for pandas
…inning to allow test; TODO: refactor readUCI for pandas>=2
…aths at the end of gitignore
…nyones long-running hspf job
…ch room for improvement
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This PR adds
pytestto the optional project dependencies, and should get automated tests passing in CI (partially, there's another PR coming that fixes the packaging/install so that the cli works again).