Python scripts in pGlyco

Change glyco.ini to glyco-15N.ini (glycoini=glyco-15N.ini) in pGlyco.cfg (for instance C:/glyco/pGlyco.cfg) in the pGlyco3/pGlycoNovo result folder.
Run python XIC.py -p C:/glyco/pGlyco.cfg, then the PeakArea column will contain the peak areas of 15N-labeled glycopeptides.

The step is similar for glyco-13C.ini.

Name		Name	Last commit message	Last commit date
Latest commit History 7 Commits
test_data		test_data
.gitignore		.gitignore
FDR_estimator.py		FDR_estimator.py
LICENSE		LICENSE
README.md		README.md
TDA_fmm.py		TDA_fmm.py
XIC.py		XIC.py
aa.ini		aa.ini
base_config.py		base_config.py
chemical.py		chemical.py
de_interference.py		de_interference.py
element.ini		element.ini
emass.py		emass.py
gLabel_GP.py		gLabel_GP.py
gLabel_ms1.py		gLabel_ms1.py
glabel-15N.gconf		glabel-15N.gconf
glabel.gconf		glabel.gconf
glyco-13C.ini		glyco-13C.ini
glyco-15N.ini		glyco-15N.ini
glyco.ini		glyco.ini
glycoworkbench_to_gdb.py		glycoworkbench_to_gdb.py
isotope.py		isotope.py
mass_utils.py		mass_utils.py
modification.ini		modification.ini
modification.py		modification.py
ms_reader.py		ms_reader.py
msms_reader.py		msms_reader.py
pGlycoFDR.py		pGlycoFDR.py
pGlycoReader.py		pGlycoReader.py
pGlyco_config.py		pGlyco_config.py
quant.py		quant.py
spectrum_index.py		spectrum_index.py
test_gwp_to_gdb.ipynb		test_gwp_to_gdb.ipynb

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