SpacoR

R version of BrainStOrmics/Spaco.

Quick Example - Citation

Installation

install.packages("devtools")
library(devtools)
install_github("https://github.com/BrainStOrmics/SpacoR")

Tutorial

• Please see our STAR Protocol for detailed description
• Please refer to the simple SpacoR_demo for using SpacoR with Seurat

Development

We are still working on this pure-R implementation for Spaco.

At this stage, several functions and features are not yet implemented in our R version of Spaco. You may refer to Spaco_reticulate_demo for calling Spaco's python version from R via the reticulate package.