ci: fix CRLF line endings in shell scripts

.gitattributes

@@ -0,0 +1,2 @@
+# Shell scripts must use LF so they run on Linux CI runners.
+*.sh text eol=lf

.github/scripts/cleanup_pr_body.sh

@@ -1,50 +1,50 @@
-#!/bin/bash
-
-set -eu
-
-# ensure 1 argument is passed
-if [ "$#" -ne 1 ]; then
-    echo "Usage: $0 <pr_number>"
-    exit 1
-fi
-
-PR_NUMBER=$1
-OLD=/tmp/orig_pr_body.txt
-NEW=/tmp/new_pr_body.txt
-
-gh pr view --json body --template "{{.body}}" "${PR_NUMBER}" > "${OLD}"
-cp "${OLD}" "${NEW}"
-
-# Remove markdown comments (like the <!-- markdownlint-disable --> at the start)
-sed -i '/<!--.*-->$/d' "${NEW}"
-
-# Remove "PLEASE FILL IN THE PR DESCRIPTION HERE ENSURING ALL CHECKLIST ITEMS (AT THE BOTTOM) HAVE BEEN CONSIDERED."
-sed -i '/PLEASE FILL IN THE PR DESCRIPTION HERE.*$/d' "${NEW}"
-
-# Remove all lines after and including "**BEFORE SUBMITTING, PLEASE READ THE CHECKLIST BELOW AND FILL IN THE DESCRIPTION ABOVE**"
-sed -i '/\*\*BEFORE SUBMITTING, PLEASE READ.*\*\*/,$d' "${NEW}"
-
-# Remove HTML <details> section that includes <summary> text of "PR Checklist (Click to Expand)"
-python3 - <<EOF
-import regex as re
-
-with open("${NEW}", "r") as file:
-    content = file.read()
-
-pattern = re.compile(r'(---\n\n)?<details>.*?<summary>.*?PR Checklist \(Click to Expand\).*?</summary>.*?</details>', re.DOTALL)
-content = re.sub(pattern, '', content)
-
-with open("${NEW}", "w") as file:
-    file.write(content)
-EOF
-
-# Run this only if ${NEW} is different than ${OLD}
-if ! cmp -s "${OLD}" "${NEW}"; then
-    gh pr edit --body-file "${NEW}" "${PR_NUMBER}"
-    echo
-    echo "Updated PR body:"
-    echo
-    cat "${NEW}"
-else
-    echo "No changes needed"
-fi
+#!/bin/bash
+
+set -eu
+
+# ensure 1 argument is passed
+if [ "$#" -ne 1 ]; then
+    echo "Usage: $0 <pr_number>"
+    exit 1
+fi
+
+PR_NUMBER=$1
+OLD=/tmp/orig_pr_body.txt
+NEW=/tmp/new_pr_body.txt
+
+gh pr view --json body --template "{{.body}}" "${PR_NUMBER}" > "${OLD}"
+cp "${OLD}" "${NEW}"
+
+# Remove markdown comments (like the <!-- markdownlint-disable --> at the start)
+sed -i '/<!--.*-->$/d' "${NEW}"
+
+# Remove "PLEASE FILL IN THE PR DESCRIPTION HERE ENSURING ALL CHECKLIST ITEMS (AT THE BOTTOM) HAVE BEEN CONSIDERED."
+sed -i '/PLEASE FILL IN THE PR DESCRIPTION HERE.*$/d' "${NEW}"
+
+# Remove all lines after and including "**BEFORE SUBMITTING, PLEASE READ THE CHECKLIST BELOW AND FILL IN THE DESCRIPTION ABOVE**"
+sed -i '/\*\*BEFORE SUBMITTING, PLEASE READ.*\*\*/,$d' "${NEW}"
+
+# Remove HTML <details> section that includes <summary> text of "PR Checklist (Click to Expand)"
+python3 - <<EOF
+import regex as re
+
+with open("${NEW}", "r") as file:
+    content = file.read()
+
+pattern = re.compile(r'(---\n\n)?<details>.*?<summary>.*?PR Checklist \(Click to Expand\).*?</summary>.*?</details>', re.DOTALL)
+content = re.sub(pattern, '', content)
+
+with open("${NEW}", "w") as file:
+    file.write(content)
+EOF
+
+# Run this only if ${NEW} is different than ${OLD}
+if ! cmp -s "${OLD}" "${NEW}"; then
+    gh pr edit --body-file "${NEW}" "${PR_NUMBER}"
+    echo
+    echo "Updated PR body:"
+    echo
+    cat "${NEW}"
+else
+    echo "No changes needed"
+fi

.github/workflows/scripts/build.sh

@@ -1,22 +1,22 @@
-#!/bin/bash
-set -eux
-
-python_executable=python$1
-cuda_home=/usr/local/cuda-$2
-
-# Update paths
-PATH=${cuda_home}/bin:$PATH
-LD_LIBRARY_PATH=${cuda_home}/lib64:$LD_LIBRARY_PATH
-
-# Install requirements
-$python_executable -m pip install -r requirements/build.txt -r requirements/cuda.txt
-
-# Limit the number of parallel jobs to avoid OOM
-export MAX_JOBS=1
-# Make sure release wheels are built for the following architectures
-export TORCH_CUDA_ARCH_LIST="7.0 7.5 8.0 8.6 8.9 9.0+PTX"
-
-bash tools/check_repo.sh
-
-# Build
-$python_executable setup.py bdist_wheel --dist-dir=dist
+#!/bin/bash
+set -eux
+
+python_executable=python$1
+cuda_home=/usr/local/cuda-$2
+
+# Update paths
+PATH=${cuda_home}/bin:$PATH
+LD_LIBRARY_PATH=${cuda_home}/lib64:$LD_LIBRARY_PATH
+
+# Install requirements
+$python_executable -m pip install -r requirements/build.txt -r requirements/cuda.txt
+
+# Limit the number of parallel jobs to avoid OOM
+export MAX_JOBS=1
+# Make sure release wheels are built for the following architectures
+export TORCH_CUDA_ARCH_LIST="7.0 7.5 8.0 8.6 8.9 9.0+PTX"
+
+bash tools/check_repo.sh
+
+# Build
+$python_executable setup.py bdist_wheel --dist-dir=dist

.github/workflows/scripts/cuda-install.sh

@@ -1,23 +1,23 @@
-#!/bin/bash
-
-# Replace '.' with '-' ex: 11.8 -> 11-8
-cuda_version=$(echo "$1" | tr "." "-")
-# Removes '-' and '.' ex: ubuntu-20.04 -> ubuntu2004
-OS=$(echo "$2" | tr -d ".\-")
-
-# Installs CUDA
-wget -nv "https://developer.download.nvidia.com/compute/cuda/repos/${OS}/x86_64/cuda-keyring_1.1-1_all.deb"
-sudo dpkg -i cuda-keyring_1.1-1_all.deb
-rm cuda-keyring_1.1-1_all.deb
-sudo apt -qq update
-sudo apt -y install "cuda-${cuda_version}" "cuda-nvcc-${cuda_version}" "cuda-libraries-dev-${cuda_version}"
-sudo apt clean
-
-# Test nvcc
-PATH=/usr/local/cuda-$1/bin:${PATH}
-nvcc --version
-
-# Log gcc, g++, c++ versions
-gcc --version
-g++ --version
-c++ --version
+#!/bin/bash
+
+# Replace '.' with '-' ex: 11.8 -> 11-8
+cuda_version=$(echo "$1" | tr "." "-")
+# Removes '-' and '.' ex: ubuntu-20.04 -> ubuntu2004
+OS=$(echo "$2" | tr -d ".\-")
+
+# Installs CUDA
+wget -nv "https://developer.download.nvidia.com/compute/cuda/repos/${OS}/x86_64/cuda-keyring_1.1-1_all.deb"
+sudo dpkg -i cuda-keyring_1.1-1_all.deb
+rm cuda-keyring_1.1-1_all.deb
+sudo apt -qq update
+sudo apt -y install "cuda-${cuda_version}" "cuda-nvcc-${cuda_version}" "cuda-libraries-dev-${cuda_version}"
+sudo apt clean
+
+# Test nvcc
+PATH=/usr/local/cuda-$1/bin:${PATH}
+nvcc --version
+
+# Log gcc, g++, c++ versions
+gcc --version
+g++ --version
+c++ --version

.github/workflows/scripts/env.sh

@@ -1,56 +1,56 @@
-#!/bin/bash
-
-# This file installs common linux environment tools
-
-export LANG C.UTF-8
-
-# python_version=$1
-
-sudo    apt-get update && \
-sudo    apt-get install -y --no-install-recommends \
-        software-properties-common \
-
-sudo    apt-get install -y --no-install-recommends \
-        build-essential \
-        apt-utils \
-        ca-certificates \
-        wget \
-        git \
-        vim \
-        libssl-dev \
-        curl \
-        unzip \
-        unrar \
-        cmake \
-        net-tools \
-        sudo \
-        autotools-dev \
-        rsync \
-        jq \
-        openssh-server \
-        tmux \
-        screen \
-        htop \
-        pdsh \
-        openssh-client \
-        lshw \
-        dmidecode \
-        util-linux \
-        automake \
-        autoconf \
-        libtool \
-        net-tools \
-        pciutils \
-        libpci-dev \
-        libaio-dev \
-        libcap2 \
-        libtinfo5 \
-        fakeroot \
-        devscripts \
-        debhelper \
-        nfs-common
-
-# Remove github bloat files to free up disk space
-sudo rm -rf "/usr/local/share/boost"
-sudo rm -rf "$AGENT_TOOLSDIRECTORY"
-sudo rm -rf "/usr/share/dotnet"
+#!/bin/bash
+
+# This file installs common linux environment tools
+
+export LANG C.UTF-8
+
+# python_version=$1
+
+sudo    apt-get update && \
+sudo    apt-get install -y --no-install-recommends \
+        software-properties-common \
+
+sudo    apt-get install -y --no-install-recommends \
+        build-essential \
+        apt-utils \
+        ca-certificates \
+        wget \
+        git \
+        vim \
+        libssl-dev \
+        curl \
+        unzip \
+        unrar \
+        cmake \
+        net-tools \
+        sudo \
+        autotools-dev \
+        rsync \
+        jq \
+        openssh-server \
+        tmux \
+        screen \
+        htop \
+        pdsh \
+        openssh-client \
+        lshw \
+        dmidecode \
+        util-linux \
+        automake \
+        autoconf \
+        libtool \
+        net-tools \
+        pciutils \
+        libpci-dev \
+        libaio-dev \
+        libcap2 \
+        libtinfo5 \
+        fakeroot \
+        devscripts \
+        debhelper \
+        nfs-common
+
+# Remove github bloat files to free up disk space
+sudo rm -rf "/usr/local/share/boost"
+sudo rm -rf "$AGENT_TOOLSDIRECTORY"
+sudo rm -rf "/usr/share/dotnet"

.github/workflows/scripts/pytorch-install.sh

@@ -1,15 +1,15 @@
-#!/bin/bash
-
-python_executable=python$1
-pytorch_version=$2
-cuda_version=$3
-
-# Install torch
-$python_executable -m pip install numpy pyyaml scipy ipython mkl mkl-include ninja cython typing pandas typing-extensions dataclasses setuptools && conda clean -ya
-$python_executable -m pip install torch=="${pytorch_version}+cu${cuda_version//./}" --extra-index-url "https://download.pytorch.org/whl/cu${cuda_version//./}"
-
-# Print version information
-$python_executable --version
-$python_executable -c "import torch; print('PyTorch:', torch.__version__)"
-$python_executable -c "import torch; print('CUDA:', torch.version.cuda)"
-$python_executable -c "from torch.utils import cpp_extension; print (cpp_extension.CUDA_HOME)"
+#!/bin/bash
+
+python_executable=python$1
+pytorch_version=$2
+cuda_version=$3
+
+# Install torch
+$python_executable -m pip install numpy pyyaml scipy ipython mkl mkl-include ninja cython typing pandas typing-extensions dataclasses setuptools && conda clean -ya
+$python_executable -m pip install torch=="${pytorch_version}+cu${cuda_version//./}" --extra-index-url "https://download.pytorch.org/whl/cu${cuda_version//./}"
+
+# Print version information
+$python_executable --version
+$python_executable -c "import torch; print('PyTorch:', torch.__version__)"
+$python_executable -c "import torch; print('CUDA:', torch.version.cuda)"
+$python_executable -c "from torch.utils import cpp_extension; print (cpp_extension.CUDA_HOME)"