After annating by snpsift, how culd I filter based on FREQ?
For example, a record with the following annotation, and I would like to filter based on GnomAD. How should I write the expression? Many thanks!
FREQ=GENOME_DK:0.05556,.,0.9444,.|GnomAD:0.3163,.,0.6837,.|KOREAN:0.1405,0,0.8595,0|SGDP_PRJ:0.0181,0.002262,0.9751,0.004525|TOMMO:0.1327,.,0.8673,.|dbGaP_PopFreq:0.0779,.,0.9221,.
After annating by snpsift, how culd I filter based on FREQ?
For example, a record with the following annotation, and I would like to filter based on GnomAD. How should I write the expression? Many thanks!
FREQ=GENOME_DK:0.05556,.,0.9444,.|GnomAD:0.3163,.,0.6837,.|KOREAN:0.1405,0,0.8595,0|SGDP_PRJ:0.0181,0.002262,0.9751,0.004525|TOMMO:0.1327,.,0.8673,.|dbGaP_PopFreq:0.0779,.,0.9221,.