There is a problem with "bambu_isoform_identification": [true]

[haili2717096-lab]

After setting bambu_isoform_identification to true, I found that using either "flexiplex" or "BLAZE" causes a surge in the number of FSMs in the transcript_assembly.fa file, accounting for approximately 80% of all transcripts. Do you have any good suggestions for this?

[ChangqingW]

You can try different ndr values in the config file (bambu_ndr, Novel Discovery Rate threshold. A value between 0 and 1)