Peptide Conformation Generation
This python language platform takes in a peptide pdb file and generates conformations using the openMM molecular dynamics software. In addition, general molecules or nonstandard peptides can also be applicable provided that they have customized force fields. One avenue to generate a custom force field is through LigParGen. KopyKat was styled in google Colab, so the program may function as intended and is aesthetically complete when executed on Colab than on Jupyter. Click KopyKat to access the Colab notebook version.
