Bioinformatics/@bio.test.js at master · latur/Bioinformatics · GitHub

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Bio.HammingDistance('CTTGAAGTGGACCTCTAGTTCC', 'ATGCCTTACCTAGATGCAATGA')
Bio.MinimumSkew('CTTGAAGTGGACCTCTAGTTCC')
Bio.Skew('CTTGAAGTGGACCTCTAGTTCC')
Bio.ReverseComplement('CTTGAAGTGGACCTCTAGTTCC')
Bio.Mismatches('ATG', 1)
Bio.Mismatches({ 'GGG': 0 }, 1)
Bio.FrequentWordsMismatches('ACGTTGCATGTCGCATGATGCATGAGAGCT', 4, 1)
Bio.ProteinTable
Bio.ProteinTranslation('AUGGCCAUGGCGCCCAGAACUGAGAUCAAUAGUACCCGUAUUAACGGGUGA')
Bio.ProteinTranslation('ATGGCCATGGCCCCCAGAACTGAGATCAATAGTACCCGTATTAACGGGTGA')
Bio.PeptideEncoding('ATGGCCATGGCCCCCAGAACTGAGATCAATAGTACCCGTATTAACGGGTGA', 'MA')
Bio.Find('ATGGCCATGGCCCCCAGAACTGAGATCAATAGTACCCGTATTAACGGGTGA', 'A')
Bio.MassTable
Bio.Mass('PRTEINSTRING')
Bio.Cyclospectrum('PRTEIN')
Bio.CyclopeptideSequencing([0, 87, 87, 87, 113, 114, 128, 128, 128, 129, 129, 131, 174, 200, 215])
Bio.CyclopeptideScoring('NQEL', [0, 99, 113, 114, 128, 227, 257, 299, 355, 356, 370, 371, 484])
Bio.ImplantedMotif(['ATTTGGC', 'TGCCTTA', 'CGGTATC', 'GAAAATT'], 3, 1)
Bio.MedianString(['ATTTGGC', 'TGCCTTA', 'CGGTATC', 'GAAAATT'], 2)
Bio.ProfileMostProbable('GTTTAAATTAAGAGGGGTCTTGTAACGAGTCCACAAAGTGTT', 3, { A: ['0.364', '0.333', '0.303'], C: ['0.182', '0.182', '0.212'], G: ['0.121', '0.303', '0.182'], T: ['0.333', '0.182', '0.303'] })