diff --git a/.gitattributes b/.gitattributes index 5ee325b..e69de29 100644 --- a/.gitattributes +++ b/.gitattributes @@ -1,5 +0,0 @@ -.n5 filter=lfs diff=lfs merge=lfs -text -.tif filter=lfs diff=lfs merge=lfs -text -.n5/** filter=lfs diff=lfs merge=lfs -text -examples/data filter=lfs diff=lfs merge=lfs -text -examples/data/** filter=lfs diff=lfs merge=lfs -text diff --git a/.gitignore b/.gitignore index 1a22ba1..145e1a4 100644 --- a/.gitignore +++ b/.gitignore @@ -177,7 +177,7 @@ cython_debug/ examples/data/test/ examples/data/deformed_data/ examples/data/test_data/ -data +/data # huge data *.tif @@ -185,6 +185,9 @@ data *.png *.ome.zarr/ +# allow example tif files +!examples/data/platy1_muscles_stardist_fixed.tif + .DS_Store # Snakemake logs diff --git a/examples/data/platy1_muscles_stardist_fixed.tif b/examples/data/platy1_muscles_stardist_fixed.tif index 02e6673..c0ed7e2 100644 Binary files a/examples/data/platy1_muscles_stardist_fixed.tif and b/examples/data/platy1_muscles_stardist_fixed.tif differ diff --git a/examples/data/rotation_matrix.txt b/examples/data/rotation_matrix.txt index 207754e..974738f 100644 --- a/examples/data/rotation_matrix.txt +++ b/examples/data/rotation_matrix.txt @@ -1,3 +1,3 @@ -version https://git-lfs.github.com/spec/v1 -oid sha256:dcdd4056e70e24809604b56e3c8efb544a04faeb8b2432b6a8feeb71e484d6b9 -size 231 +-7.848855672213957968e-01 -3.659981507706668857e-01 4.999999999999999445e-01 +-2.320907072649043834e-01 -5.745333323392335378e-01 -7.848855672213957968e-01 +5.745333323392335378e-01 -7.320907072649044389e-01 3.659981507706668302e-01 diff --git a/examples/data/transformation_matrix.txt b/examples/data/transformation_matrix.txt index a4ae13a..ad86ad1 100644 --- a/examples/data/transformation_matrix.txt +++ b/examples/data/transformation_matrix.txt @@ -1,3 +1,4 @@ -version https://git-lfs.github.com/spec/v1 -oid sha256:d5e9bd5d72c68d4b8fa4d68b37382c836e24bdf87e0893222cdb564c8bf9ab3e -size 406 +-7.848855672213957968e-01 -2.320907072649043834e-01 5.745333323392335378e-01 1.569765970512837612e+02 +-3.659981507706668857e-01 -5.745333323392335378e-01 -7.320907072649044389e-01 3.739810799220299486e+02 +4.999999999999999445e-01 -7.848855672213957968e-01 3.659981507706668302e-01 5.348848350438517230e+01 +0.000000000000000000e+00 0.000000000000000000e+00 0.000000000000000000e+00 1.000000000000000000e+00