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xiuliren
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Mar 21, 2023
* Add files via upload * boundary augmentation * commented reneu * commentted reneu * added * stuff * made change * tensorboard * here * changes * changes * change * yes * changes
xiuliren
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Apr 9, 2023
* Merge pull request #1 from flatironinstitute/main (#19) * Add files via upload * boundary augmentation * commented reneu * commentted reneu * added * stuff * made change * tensorboard * here * changes * changes * change * yes * changes * update the samples * loaded image chunks, but the image dimension is not correctly handled * fixed a bug of patch cutout * add cleanup script to clean up the files produced during training * affinity map training is still not working. the random_patch function is not calling the inherited transform function * fix some array size * affinity map training is working --------- Co-authored-by: Manuel Paez <79882298+mannypaeza@users.noreply.github.com>
xiuliren
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Apr 27, 2023
* Merge pull request #1 from flatironinstitute/main (#19) * Add files via upload * boundary augmentation * commented reneu * commentted reneu * added * stuff * made change * tensorboard * here * changes * changes * change * yes * changes * update the samples * loaded image chunks, but the image dimension is not correctly handled * fixed a bug of patch cutout * add cleanup script to clean up the files produced during training * affinity map training is still not working. the random_patch function is not calling the inherited transform function * fix some array size * changes to ba file * print more info * save the status, not working yet. The patch location generators are done. * initial * rename patch_location_generator to patch_bounding_box_generator * documentation * inherite from trainerbase to fix a bug of target to be all zero. * whole brain volume sampler --------- Co-authored-by: Manuel Paez <79882298+mannypaeza@users.noreply.github.com> Co-authored-by: Manuel Paez <mpaez@rustyamd1.cm.cluster> Co-authored-by: mannypaeza <mpaez@rusty2.cm.cluster>
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