Skip to content

Issue while running docker image #2

@caramirezal

Description

@caramirezal

I was unable to run the example data in the documentation using the singularity image in the curry cluster. I find the following the error:

## Error singularity on curry cluster
singularity shell --bind /media/ag-cherrmann/cramirez/tissueSpecificRegulonInference/ docker://hdsu/shinybutchr
 Error in py_get_item_impl(x, key, FALSE) : 
  TypeError: 'module' object is not subscriptable

However, calling ButchR inside the curry RStudio Server worked for me using a conda environment with python 3.8.0 and installing tensor flow 3.2.0 using pip.

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Type

    No type
    No fields configured for issues without a type.

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions