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CDataFrameTrainBoostedTreeRunner.cc
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671 lines (616 loc) · 33.9 KB
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/*
* Copyright Elasticsearch B.V. and/or licensed to Elasticsearch B.V. under one
* or more contributor license agreements. Licensed under the Elastic License
* 2.0 and the following additional limitation. Functionality enabled by the
* files subject to the Elastic License 2.0 may only be used in production when
* invoked by an Elasticsearch process with a license key installed that permits
* use of machine learning features. You may not use this file except in
* compliance with the Elastic License 2.0 and the foregoing additional
* limitation.
*/
#include <api/CDataFrameTrainBoostedTreeRunner.h>
#include <core/CBoostJsonConcurrentLineWriter.h>
#include <core/CDataFrame.h>
#include <core/CJsonStatePersistInserter.h>
#include <core/CLogger.h>
#include <core/CPackedBitVector.h>
#include <core/CProgramCounters.h>
#include <core/CStateDecompressor.h>
#include <core/CStopWatch.h>
#include <core/Constants.h>
#include <maths/analytics/CBoostedTree.h>
#include <maths/analytics/CBoostedTreeFactory.h>
#include <maths/analytics/CBoostedTreeLoss.h>
#include <maths/analytics/CDataFrameUtils.h>
#include <api/CBoostedTreeInferenceModelBuilder.h>
#include <api/CDataFrameAnalysisConfigReader.h>
#include <api/CDataFrameAnalysisSpecification.h>
#include <api/CDataSummarizationJsonWriter.h>
#include <api/CInferenceModelDefinition.h>
#include <api/CRetrainableModelJsonReader.h>
#include <api/ElasticsearchStateIndex.h>
#include <boost/json.hpp>
#include <limits>
namespace json = boost::json;
namespace ml {
namespace api {
namespace {
const std::size_t NUMBER_ROUNDS_PER_HYPERPARAMETER_IS_UNSET{
std::numeric_limits<std::size_t>::max()};
}
const CDataFrameAnalysisConfigReader& CDataFrameTrainBoostedTreeRunner::parameterReader() {
static const CDataFrameAnalysisConfigReader PARAMETER_READER{[] {
CDataFrameAnalysisConfigReader theReader;
theReader.addParameter(RANDOM_NUMBER_GENERATOR_SEED,
CDataFrameAnalysisConfigReader::E_OptionalParameter);
theReader.addParameter(DEPENDENT_VARIABLE_NAME,
CDataFrameAnalysisConfigReader::E_RequiredParameter);
theReader.addParameter(PREDICTION_FIELD_NAME,
CDataFrameAnalysisConfigReader::E_OptionalParameter);
theReader.addParameter(DOWNSAMPLE_ROWS_PER_FEATURE,
CDataFrameAnalysisConfigReader::E_OptionalParameter);
theReader.addParameter(DOWNSAMPLE_FACTOR,
CDataFrameAnalysisConfigReader::E_OptionalParameter);
theReader.addParameter(ALPHA, CDataFrameAnalysisConfigReader::E_OptionalParameter);
theReader.addParameter(LAMBDA, CDataFrameAnalysisConfigReader::E_OptionalParameter);
theReader.addParameter(GAMMA, CDataFrameAnalysisConfigReader::E_OptionalParameter);
theReader.addParameter(ETA, CDataFrameAnalysisConfigReader::E_OptionalParameter);
theReader.addParameter(ETA_GROWTH_RATE_PER_TREE,
CDataFrameAnalysisConfigReader::E_OptionalParameter);
theReader.addParameter(RETRAINED_TREE_ETA,
CDataFrameAnalysisConfigReader::E_OptionalParameter);
theReader.addParameter(SOFT_TREE_DEPTH_LIMIT,
CDataFrameAnalysisConfigReader::E_OptionalParameter);
theReader.addParameter(SOFT_TREE_DEPTH_TOLERANCE,
CDataFrameAnalysisConfigReader::E_OptionalParameter);
theReader.addParameter(MAX_TREES, CDataFrameAnalysisConfigReader::E_OptionalParameter);
theReader.addParameter(MAX_DEPLOYED_MODEL_SIZE,
CDataFrameAnalysisConfigReader::E_OptionalParameter);
theReader.addParameter(FEATURE_BAG_FRACTION,
CDataFrameAnalysisConfigReader::E_OptionalParameter);
theReader.addParameter(PREDICTION_CHANGE_COST,
CDataFrameAnalysisConfigReader::E_OptionalParameter);
theReader.addParameter(TREE_TOPOLOGY_CHANGE_PENALTY,
CDataFrameAnalysisConfigReader::E_OptionalParameter);
theReader.addParameter(NUM_HOLDOUT_ROWS, CDataFrameAnalysisConfigReader::E_OptionalParameter);
theReader.addParameter(NUM_FOLDS, CDataFrameAnalysisConfigReader::E_OptionalParameter);
theReader.addParameter(TRAIN_FRACTION_PER_FOLD,
CDataFrameAnalysisConfigReader::E_OptionalParameter);
theReader.addParameter(STOP_CROSS_VALIDATION_EARLY,
CDataFrameAnalysisConfigReader::E_OptionalParameter);
theReader.addParameter(MAX_OPTIMIZATION_ROUNDS_PER_HYPERPARAMETER,
CDataFrameAnalysisConfigReader::E_OptionalParameter);
theReader.addParameter(BAYESIAN_OPTIMISATION_RESTARTS,
CDataFrameAnalysisConfigReader::E_OptionalParameter);
theReader.addParameter(NUM_TOP_FEATURE_IMPORTANCE_VALUES,
CDataFrameAnalysisConfigReader::E_OptionalParameter);
theReader.addParameter(TRAINING_PERCENT_FIELD_NAME,
CDataFrameAnalysisConfigReader::E_OptionalParameter);
theReader.addParameter(FEATURE_PROCESSORS,
CDataFrameAnalysisConfigReader::E_OptionalParameter);
theReader.addParameter(EARLY_STOPPING_ENABLED,
CDataFrameAnalysisConfigReader::E_OptionalParameter);
theReader.addParameter(FORCE_ACCEPT_INCREMENTAL_TRAINING,
CDataFrameAnalysisConfigReader::E_OptionalParameter);
theReader.addParameter(DISABLE_HYPERPARAMETER_SCALING,
CDataFrameAnalysisConfigReader::E_OptionalParameter);
theReader.addParameter(DATA_SUMMARIZATION_FRACTION,
CDataFrameAnalysisConfigReader::E_OptionalParameter);
theReader.addParameter(
TASK, CDataFrameAnalysisConfigReader::E_OptionalParameter,
{{TASK_ENCODE, int{api_t::EDataFrameTrainBoostedTreeTask::E_Encode}},
{TASK_TRAIN, int{api_t::EDataFrameTrainBoostedTreeTask::E_Train}},
{TASK_UPDATE, int{api_t::EDataFrameTrainBoostedTreeTask::E_Update}},
{TASK_PREDICT, int{api_t::EDataFrameTrainBoostedTreeTask::E_Predict}}});
theReader.addParameter(PREVIOUS_TRAIN_LOSS_GAP,
CDataFrameAnalysisConfigReader::E_OptionalParameter);
theReader.addParameter(PREVIOUS_TRAIN_NUM_ROWS,
CDataFrameAnalysisConfigReader::E_OptionalParameter);
theReader.addParameter(MAX_NUM_NEW_TREES,
CDataFrameAnalysisConfigReader::E_OptionalParameter);
theReader.addParameter(ROW_WEIGHT_COLUMN,
CDataFrameAnalysisConfigReader::E_OptionalParameter);
return theReader;
}()};
return PARAMETER_READER;
}
CDataFrameTrainBoostedTreeRunner::CDataFrameTrainBoostedTreeRunner(
const CDataFrameAnalysisSpecification& spec,
const CDataFrameAnalysisParameters& parameters,
TLossFunctionUPtr loss,
TDataFrameUPtrTemporaryDirectoryPtrPr* frameAndDirectory)
: CDataFrameAnalysisRunner{spec}, m_DimensionPrediction{loss->dimensionPrediction()},
m_DimensionGradient{loss->dimensionGradient()}, m_Instrumentation{spec.jobId(),
spec.memoryLimit()} {
if (loss == nullptr) {
HANDLE_FATAL(<< "Internal error: must provide a loss function for training."
<< " Please report this problem");
return;
}
using TDoubleVec = std::vector<double>;
m_DependentVariableFieldName = parameters[DEPENDENT_VARIABLE_NAME].as<std::string>();
m_PredictionFieldName = parameters[PREDICTION_FIELD_NAME].fallback(
m_DependentVariableFieldName + "_prediction");
m_TrainingPercent = parameters[TRAINING_PERCENT_FIELD_NAME].fallback(100.0) / 100.0;
m_Task = parameters[TASK].fallback(api_t::E_Train);
m_TrainedModelMemoryUsage =
parameters[TRAINED_MODEL_MEMORY_USAGE].fallback(std::size_t{0});
// Training parameters.
auto seed = parameters[RANDOM_NUMBER_GENERATOR_SEED].fallback(std::ptrdiff_t{0});
auto numberHoldoutRows = parameters[NUM_HOLDOUT_ROWS].fallback(std::size_t{0});
auto numberFolds = parameters[NUM_FOLDS].fallback(std::size_t{0});
auto trainFractionPerFold = parameters[TRAIN_FRACTION_PER_FOLD].fallback(-1.0);
auto downsampleRowsPerFeature =
parameters[DOWNSAMPLE_ROWS_PER_FEATURE].fallback(std::size_t{0});
auto numberRoundsPerHyperparameter =
parameters[MAX_OPTIMIZATION_ROUNDS_PER_HYPERPARAMETER].fallback(
NUMBER_ROUNDS_PER_HYPERPARAMETER_IS_UNSET);
auto stopHyperparameterOptimizationEarly =
parameters[EARLY_STOPPING_ENABLED].fallback(true);
auto bayesianOptimisationRestarts =
parameters[BAYESIAN_OPTIMISATION_RESTARTS].fallback(std::size_t{0});
auto stopCrossValidationEarly = parameters[STOP_CROSS_VALIDATION_EARLY].fallback(true);
auto numberTopShapValues =
parameters[NUM_TOP_FEATURE_IMPORTANCE_VALUES].fallback(std::size_t{0});
auto rowWeightColumnName = parameters[ROW_WEIGHT_COLUMN].fallback(std::string{});
auto maximumDeployedSize = parameters[MAX_DEPLOYED_MODEL_SIZE].fallback(
core::constants::BYTES_IN_GIGABYTES);
// Hyperparameters.
auto maxTrees = parameters[MAX_TREES].fallback(std::size_t{0});
auto alpha = parameters[ALPHA].fallback(TDoubleVec{});
auto lambda = parameters[LAMBDA].fallback(TDoubleVec{});
auto gamma = parameters[GAMMA].fallback(TDoubleVec{});
auto eta = parameters[ETA].fallback(TDoubleVec{});
auto etaGrowthRatePerTree = parameters[ETA_GROWTH_RATE_PER_TREE].fallback(TDoubleVec{});
auto retrainedTreeEta = parameters[RETRAINED_TREE_ETA].fallback(TDoubleVec{});
auto softTreeDepthLimit = parameters[SOFT_TREE_DEPTH_LIMIT].fallback(TDoubleVec{});
auto softTreeDepthTolerance =
parameters[SOFT_TREE_DEPTH_TOLERANCE].fallback(TDoubleVec{});
auto downsampleFactor = parameters[DOWNSAMPLE_FACTOR].fallback(TDoubleVec{});
auto featureBagFraction = parameters[FEATURE_BAG_FRACTION].fallback(TDoubleVec{});
auto predictionChangeCost = parameters[PREDICTION_CHANGE_COST].fallback(TDoubleVec{});
auto treeTopologyChangePenalty =
parameters[TREE_TOPOLOGY_CHANGE_PENALTY].fallback(TDoubleVec{});
// Incremental training.
auto forceAcceptIncrementalTraining =
parameters[FORCE_ACCEPT_INCREMENTAL_TRAINING].fallback(false);
auto disableHyperparameterScaling =
parameters[DISABLE_HYPERPARAMETER_SCALING].fallback(false);
auto dataSummarizationFraction = parameters[DATA_SUMMARIZATION_FRACTION].fallback(-1.0);
auto previousTrainLossGap = parameters[PREVIOUS_TRAIN_LOSS_GAP].fallback(-1.0);
auto previousTrainNumberRows =
parameters[PREVIOUS_TRAIN_NUM_ROWS].fallback(std::size_t{0});
auto maxNumberNewTrees = parameters[MAX_NUM_NEW_TREES].fallback(std::size_t{0});
if (parameters[FEATURE_PROCESSORS].jsonObject() != nullptr) {
m_CustomProcessors = *parameters[FEATURE_PROCESSORS].jsonObject();
}
if (std::any_of(alpha.begin(), alpha.end(), [](double x) { return x < 0.0; })) {
HANDLE_FATAL(<< "Input error: '" << ALPHA << "' should be non-negative.");
}
if (std::any_of(lambda.begin(), lambda.end(),
[](double x) { return x < 0.0; })) {
HANDLE_FATAL(<< "Input error: '" << LAMBDA << "' should be non-negative.");
}
if (std::any_of(gamma.begin(), gamma.end(), [](double x) { return x < 0.0; })) {
HANDLE_FATAL(<< "Input error: '" << GAMMA << "' should be non-negative.");
}
if (std::any_of(eta.begin(), eta.end(),
[](double x) { return x <= 0.0 || x > 1.0; })) {
HANDLE_FATAL(<< "Input error: '" << ETA << "' should be in the range (0, 1].");
}
if (std::any_of(etaGrowthRatePerTree.begin(), etaGrowthRatePerTree.end(),
[](double x) { return x <= 0.0; })) {
HANDLE_FATAL(<< "Input error: '" << ETA_GROWTH_RATE_PER_TREE << "' should be positive.");
}
if (std::any_of(retrainedTreeEta.begin(), retrainedTreeEta.end(),
[](double x) { return x <= 0.0 || x > 1.0; })) {
HANDLE_FATAL(<< "Input error: '" << RETRAINED_TREE_ETA
<< "' should be in the range (0, 1].");
}
if (std::any_of(softTreeDepthLimit.begin(), softTreeDepthLimit.end(),
[](double x) { return x < 0.0; })) {
HANDLE_FATAL(<< "Input error: '" << SOFT_TREE_DEPTH_LIMIT << "' should be non-negative.");
}
if (std::any_of(softTreeDepthTolerance.begin(), softTreeDepthTolerance.end(),
[](double x) { return x <= 0.0; })) {
HANDLE_FATAL(<< "Input error: '" << SOFT_TREE_DEPTH_TOLERANCE << "' should be positive.");
}
if (std::any_of(downsampleFactor.begin(), downsampleFactor.end(),
[](double x) { return x <= 0.0 || x > 1.0; })) {
HANDLE_FATAL(<< "Input error: '" << DOWNSAMPLE_FACTOR << "' should be in the range (0, 1]");
}
if (std::any_of(featureBagFraction.begin(), featureBagFraction.end(),
[](double x) { return x <= 0.0 || x > 1.0; })) {
HANDLE_FATAL(<< "Input error: '" << FEATURE_BAG_FRACTION
<< "' should be in the range (0, 1]");
}
if (std::any_of(predictionChangeCost.begin(), predictionChangeCost.end(),
[](double x) { return x < 0.0; })) {
HANDLE_FATAL(<< "Input error: '" << PREDICTION_CHANGE_COST << "' should be non-negative");
}
if (std::any_of(treeTopologyChangePenalty.begin(), treeTopologyChangePenalty.end(),
[](double x) { return x < 0.0; })) {
HANDLE_FATAL(<< "Input error: '" << TREE_TOPOLOGY_CHANGE_PENALTY
<< "' should be non-negative");
}
if (rowWeightColumnName.empty() == false &&
(rowWeightColumnName == m_DependentVariableFieldName ||
std::find(spec.categoricalFieldNames().begin(),
spec.categoricalFieldNames().end(),
rowWeightColumnName) != spec.categoricalFieldNames().end())) {
HANDLE_FATAL(<< "Input error: row weight column '" << rowWeightColumnName
<< "' can't be categorical or the same as the supplied '"
<< DEPENDENT_VARIABLE_NAME << "'.");
}
m_Instrumentation.task(m_Task);
this->computeAndSaveExecutionStrategy();
m_BoostedTreeFactory = this->boostedTreeFactory(std::move(loss), frameAndDirectory);
(*m_BoostedTreeFactory)
.seed(seed)
.numberHoldoutRows(numberHoldoutRows)
.stopCrossValidationEarly(stopCrossValidationEarly)
.analysisInstrumentation(m_Instrumentation)
.trainingStateCallback(this->statePersister())
.stopHyperparameterOptimizationEarly(stopHyperparameterOptimizationEarly)
.forceAcceptIncrementalTraining(forceAcceptIncrementalTraining)
.disableHyperparameterScaling(disableHyperparameterScaling)
.downsampleFactor(std::move(downsampleFactor))
.depthPenaltyMultiplier(std::move(alpha))
.treeSizePenaltyMultiplier(std::move(gamma))
.leafWeightPenaltyMultiplier(std::move(lambda))
.eta(std::move(eta))
.etaGrowthRatePerTree(std::move(etaGrowthRatePerTree))
.retrainedTreeEta(std::move(retrainedTreeEta))
.softTreeDepthLimit(std::move(softTreeDepthLimit))
.softTreeDepthTolerance(std::move(softTreeDepthTolerance))
.featureBagFraction(std::move(featureBagFraction))
.predictionChangeCost(std::move(predictionChangeCost))
.treeTopologyChangePenalty(std::move(treeTopologyChangePenalty))
.maximumDeployedSize(maximumDeployedSize)
.rowWeightColumnName(std::move(rowWeightColumnName));
if (downsampleRowsPerFeature > 0) {
m_BoostedTreeFactory->initialDownsampleRowsPerFeature(
static_cast<double>(downsampleRowsPerFeature));
}
if (maxTrees > 0) {
m_BoostedTreeFactory->maximumNumberTrees(maxTrees);
}
if (numberFolds > 1) {
m_BoostedTreeFactory->numberFolds(numberFolds);
}
if (trainFractionPerFold > 0.0) {
m_BoostedTreeFactory->trainFractionPerFold(trainFractionPerFold);
}
if (numberRoundsPerHyperparameter != NUMBER_ROUNDS_PER_HYPERPARAMETER_IS_UNSET) {
m_BoostedTreeFactory->maximumOptimisationRoundsPerHyperparameter(numberRoundsPerHyperparameter);
}
if (bayesianOptimisationRestarts > 0) {
m_BoostedTreeFactory->bayesianOptimisationRestarts(bayesianOptimisationRestarts);
}
if (numberTopShapValues > 0) {
m_BoostedTreeFactory->numberTopShapValues(numberTopShapValues);
}
if (dataSummarizationFraction > 0) {
m_BoostedTreeFactory->dataSummarizationFraction(dataSummarizationFraction);
}
if (previousTrainLossGap > 0.0) {
m_BoostedTreeFactory->previousTrainLossGap(previousTrainLossGap);
}
if (previousTrainNumberRows > 0) {
m_BoostedTreeFactory->previousTrainNumberRows(previousTrainNumberRows);
}
if (maxNumberNewTrees > 0) {
m_BoostedTreeFactory->maximumNumberNewTrees(maxNumberNewTrees);
}
}
CDataFrameTrainBoostedTreeRunner::~CDataFrameTrainBoostedTreeRunner() = default;
std::size_t CDataFrameTrainBoostedTreeRunner::numberExtraColumns() const {
switch (m_Task) {
case api_t::E_Encode:
return maths::analytics::CBoostedTreeFactory::estimateExtraColumnsForEncode();
case api_t::E_Train:
return maths::analytics::CBoostedTreeFactory::estimateExtraColumnsForTrain(
this->spec().numberColumns(), m_DimensionPrediction, m_DimensionGradient);
case api_t::E_Update:
return maths::analytics::CBoostedTreeFactory::estimateExtraColumnsForTrainIncremental(
this->spec().numberColumns(), m_DimensionPrediction, m_DimensionGradient);
case api_t::E_Predict:
return maths::analytics::CBoostedTreeFactory::estimateExtraColumnsForPredict(
m_DimensionPrediction);
}
LOG_ABORT(<< "Unexpected task type");
}
std::size_t CDataFrameTrainBoostedTreeRunner::dataFrameSliceCapacity() const {
std::size_t sliceCapacity{core::dataFrameDefaultSliceCapacity(
this->spec().numberColumns() + this->numberExtraColumns())};
std::size_t numberThreads{this->spec().numberThreads()};
if (numberThreads > 1) {
std::size_t numberRows{this->spec().numberRows()};
// Use at least one slice per thread because we parallelize work over slices.
std::size_t capacityForOneSlicePerThread{(numberRows + numberThreads - 1) / numberThreads};
sliceCapacity = std::min(sliceCapacity, capacityForOneSlicePerThread);
// Round the slice size so number threads is a divisor of the number of slices.
std::size_t numberSlices{numberRows / sliceCapacity};
sliceCapacity = numberRows /
(numberThreads * ((numberSlices + numberThreads / 2) / numberThreads));
}
return std::max(sliceCapacity, std::size_t{128});
}
core::CPackedBitVector
CDataFrameTrainBoostedTreeRunner::rowsToWriteMask(const core::CDataFrame& frame) const {
switch (m_Task) {
case api_t::E_Encode:
return {frame.numberRows(), false};
case api_t::E_Train:
return {frame.numberRows(), true};
case api_t::E_Predict:
case api_t::E_Update:
return m_BoostedTree->newTrainingRowMask();
}
LOG_ABORT(<< "Unexpected task type");
}
const std::string& CDataFrameTrainBoostedTreeRunner::dependentVariableFieldName() const {
return m_DependentVariableFieldName;
}
const std::string& CDataFrameTrainBoostedTreeRunner::predictionFieldName() const {
return m_PredictionFieldName;
}
const maths::analytics::CBoostedTree& CDataFrameTrainBoostedTreeRunner::boostedTree() const {
if (m_BoostedTree == nullptr) {
HANDLE_FATAL(<< "Internal error: boosted tree missing. Please report this problem.");
}
return *m_BoostedTree;
}
maths::analytics::CBoostedTreeFactory& CDataFrameTrainBoostedTreeRunner::boostedTreeFactory() {
if (m_BoostedTreeFactory == nullptr) {
HANDLE_FATAL(<< "Internal error: boosted tree factory missing. Please report this problem.");
}
return *m_BoostedTreeFactory;
}
const maths::analytics::CBoostedTreeFactory&
CDataFrameTrainBoostedTreeRunner::boostedTreeFactory() const {
if (m_BoostedTreeFactory == nullptr) {
HANDLE_FATAL(<< "Internal error: boosted tree factory missing. Please report this problem.");
}
return *m_BoostedTreeFactory;
}
bool CDataFrameTrainBoostedTreeRunner::validate(const core::CDataFrame& frame) const {
if (frame.numberColumns() <= 1) {
HANDLE_FATAL(<< "Input error: analysis need at least one regressor.");
return false;
}
if (frame.numberRows() > maths::analytics::CBoostedTreeFactory::maximumNumberRows()) {
HANDLE_FATAL(<< "Input error: no more than "
<< maths::analytics::CBoostedTreeFactory::maximumNumberRows()
<< " are supported. You need to downsample your data.");
return false;
}
return true;
}
void CDataFrameTrainBoostedTreeRunner::accept(CBoostedTreeInferenceModelBuilder& builder) const {
if (m_CustomProcessors.is_null() == false) {
builder.addCustomProcessor(std::make_unique<COpaqueEncoding>(m_CustomProcessors));
}
this->boostedTree().accept(builder);
}
void CDataFrameTrainBoostedTreeRunner::computeAndSaveExecutionStrategy() {
// We always use in core storage for the data frame for boosted tree training
// because it is too slow to use disk.
this->numberPartitions(1);
this->maximumNumberRowsPerPartition(this->spec().numberRows());
}
void CDataFrameTrainBoostedTreeRunner::runImpl(core::CDataFrame& frame) {
auto dependentVariablePos = std::find(frame.columnNames().begin(),
frame.columnNames().end(),
m_DependentVariableFieldName);
if (dependentVariablePos == frame.columnNames().end()) {
HANDLE_FATAL(<< "Input error: supplied variable to predict '"
<< m_DependentVariableFieldName << "' is missing from training"
<< " data " << frame.columnNames());
return;
}
core::CProgramCounters::counter(counter_t::E_DFTPMEstimatedPeakMemoryUsage) =
this->estimateMemoryUsage(frame.numberRows(),
frame.numberRows() / this->numberPartitions(),
frame.numberColumns() + this->numberExtraColumns());
core::CStopWatch watch{true};
std::size_t dependentVariableColumn(dependentVariablePos -
frame.columnNames().begin());
this->validate(frame, dependentVariableColumn);
switch (m_Task) {
case api_t::E_Encode:
m_BoostedTree = m_BoostedTreeFactory->buildForEncode(frame, dependentVariableColumn);
break;
case api_t::E_Train: {
auto restoreSearcher = this->spec().restoreSearcher();
auto boostedTree = (restoreSearcher == nullptr)
? nullptr
: this->restoreBoostedTree(frame, dependentVariableColumn,
restoreSearcher);
m_BoostedTree = [&] {
return boostedTree != nullptr
? std::move(boostedTree)
: m_BoostedTreeFactory->buildForTrain(frame, dependentVariableColumn);
}();
m_BoostedTree->train();
m_BoostedTree->predict();
} break;
case api_t::E_Update:
m_BoostedTree = m_BoostedTreeFactory->buildForTrainIncremental(frame, dependentVariableColumn);
m_BoostedTree->trainIncremental();
m_BoostedTree->predict(true /*new data only*/);
break;
case api_t::E_Predict:
m_BoostedTree = m_BoostedTreeFactory->buildForPredict(frame, dependentVariableColumn);
// Prediction occurs in buildForPredict.
// m_BoostedTree->predict(true /*new data only*/);
break;
}
core::CProgramCounters::counter(counter_t::E_DFTPMTimeToTrain) = watch.stop();
}
CDataFrameTrainBoostedTreeRunner::TBoostedTreeFactoryUPtr
CDataFrameTrainBoostedTreeRunner::boostedTreeFactory(TLossFunctionUPtr loss,
TDataFrameUPtrTemporaryDirectoryPtrPr* frameAndDirectory) const {
switch (m_Task) {
case api_t::E_Encode:
case api_t::E_Train:
break;
case api_t::E_Update:
case api_t::E_Predict:
if (frameAndDirectory != nullptr) {
// This will be null if we're just computing memory usage.
auto restoreSearcher = this->spec().restoreSearcher();
if (restoreSearcher == nullptr) {
HANDLE_FATAL(<< "Input error: can't predict or incrementally training without supplying a model.");
break;
}
*frameAndDirectory = this->makeDataFrame();
auto bestForestRestorer =
[](CRetrainableModelJsonReader::TIStreamSPtr inputStream,
const CRetrainableModelJsonReader::TStrSizeUMap& encodingsIndices) {
return CRetrainableModelJsonReader::bestForestFromCompressedJsonStream(
std::move(inputStream), encodingsIndices);
};
auto dataSummarizationRestorer = [](CRetrainableModelJsonReader::TIStreamSPtr inputStream,
core::CDataFrame& frame) {
return CRetrainableModelJsonReader::dataSummarizationFromCompressedJsonStream(
std::move(inputStream), frame);
};
auto& frame = frameAndDirectory->first;
auto result = std::make_unique<maths::analytics::CBoostedTreeFactory>(
maths::analytics::CBoostedTreeFactory::constructFromDefinition(
this->spec().numberThreads(), std::move(loss), *restoreSearcher,
*frame, dataSummarizationRestorer, bestForestRestorer));
result->newTrainingRowMask(core::CPackedBitVector{frame->numberRows(), false});
return result;
}
break;
}
return std::make_unique<maths::analytics::CBoostedTreeFactory>(
maths::analytics::CBoostedTreeFactory::constructFromParameters(
this->spec().numberThreads(), std::move(loss)));
}
CDataFrameTrainBoostedTreeRunner::TBoostedTreeUPtr
CDataFrameTrainBoostedTreeRunner::restoreBoostedTree(core::CDataFrame& frame,
std::size_t dependentVariableColumn,
const TDataSearcherUPtr& restoreSearcher) {
if (restoreSearcher == nullptr) {
return nullptr;
}
// Restore from compressed JSON.
try {
core::CStateDecompressor decompressor{*restoreSearcher};
core::CDataSearcher::TIStreamP inputStream{decompressor.search(1, 1)}; // search arguments are ignored
if (inputStream == nullptr) {
LOG_ERROR(<< "Unable to connect to data store");
return nullptr;
}
if (inputStream->bad()) {
LOG_ERROR(<< "State restoration search returned bad stream");
return nullptr;
}
if (inputStream->fail()) {
// This is fatal. If the stream exists and has failed then state is missing
LOG_ERROR(<< "State restoration search returned failed stream");
return nullptr;
}
return maths::analytics::CBoostedTreeFactory::constructFromString(*inputStream)
.analysisInstrumentation(m_Instrumentation)
.trainingStateCallback(this->statePersister())
.restoreFor(frame, dependentVariableColumn);
} catch (std::exception& e) {
LOG_ERROR(<< "Failed to restore state! " << e.what());
}
return nullptr;
}
std::size_t CDataFrameTrainBoostedTreeRunner::estimateBookkeepingMemoryUsage(
std::size_t /*numberPartitions*/,
std::size_t totalNumberRows,
std::size_t /*partitionNumberRows*/,
std::size_t numberColumns) const {
std::size_t numberTrainingRows{static_cast<std::size_t>(
static_cast<double>(totalNumberRows) * m_TrainingPercent + 0.5)};
switch (m_Task) {
case api_t::E_Encode:
return m_BoostedTreeFactory->estimateMemoryUsageForEncode(
numberTrainingRows, numberColumns,
this->spec().categoricalFieldNames().size());
case api_t::E_Train:
return m_BoostedTreeFactory->estimateMemoryUsageForTrain(numberTrainingRows,
numberColumns);
case api_t::E_Update:
return m_TrainedModelMemoryUsage +
m_BoostedTreeFactory->estimateMemoryUsageForTrainIncremental(
numberTrainingRows, numberColumns);
case api_t::E_Predict:
return m_TrainedModelMemoryUsage + m_BoostedTreeFactory->estimateMemoryUsageForPredict(
numberTrainingRows, numberColumns);
}
LOG_ABORT(<< "Unexpected task type");
}
const CDataFrameAnalysisInstrumentation&
CDataFrameTrainBoostedTreeRunner::instrumentation() const {
return m_Instrumentation;
}
CDataFrameAnalysisInstrumentation& CDataFrameTrainBoostedTreeRunner::instrumentation() {
return m_Instrumentation;
}
CDataFrameAnalysisRunner::TDataSummarizationJsonWriterUPtr
CDataFrameTrainBoostedTreeRunner::dataSummarization() const {
auto rowMask = this->boostedTree().dataSummarization();
if (rowMask.manhattan() <= 0.0) {
return {};
}
return std::make_unique<CDataSummarizationJsonWriter>(
this->boostedTree().trainingData(), std::move(rowMask),
this->spec().numberColumns(), this->boostedTree().categoryEncoder());
}
// clang-format off
const std::string CDataFrameTrainBoostedTreeRunner::RANDOM_NUMBER_GENERATOR_SEED{"randomize_seed"};
const std::string CDataFrameTrainBoostedTreeRunner::DEPENDENT_VARIABLE_NAME{"dependent_variable"};
const std::string CDataFrameTrainBoostedTreeRunner::PREDICTION_FIELD_NAME{"prediction_field_name"};
const std::string CDataFrameTrainBoostedTreeRunner::TRAINING_PERCENT_FIELD_NAME{"training_percent"};
const std::string CDataFrameTrainBoostedTreeRunner::DOWNSAMPLE_ROWS_PER_FEATURE{"downsample_rows_per_feature"};
const std::string CDataFrameTrainBoostedTreeRunner::DOWNSAMPLE_FACTOR{"downsample_factor"};
const std::string CDataFrameTrainBoostedTreeRunner::ALPHA{"alpha"};
const std::string CDataFrameTrainBoostedTreeRunner::LAMBDA{"lambda"};
const std::string CDataFrameTrainBoostedTreeRunner::GAMMA{"gamma"};
const std::string CDataFrameTrainBoostedTreeRunner::ETA{"eta"};
const std::string CDataFrameTrainBoostedTreeRunner::ETA_GROWTH_RATE_PER_TREE{"eta_growth_rate_per_tree"};
const std::string CDataFrameTrainBoostedTreeRunner::RETRAINED_TREE_ETA{"retrained_tree_eta"};
const std::string CDataFrameTrainBoostedTreeRunner::SOFT_TREE_DEPTH_LIMIT{"soft_tree_depth_limit"};
const std::string CDataFrameTrainBoostedTreeRunner::SOFT_TREE_DEPTH_TOLERANCE{"soft_tree_depth_tolerance"};
const std::string CDataFrameTrainBoostedTreeRunner::MAX_TREES{"max_trees"};
const std::string CDataFrameTrainBoostedTreeRunner::MAX_DEPLOYED_MODEL_SIZE{"max_model_size"};
const std::string CDataFrameTrainBoostedTreeRunner::FEATURE_BAG_FRACTION{"feature_bag_fraction"};
const std::string CDataFrameTrainBoostedTreeRunner::PREDICTION_CHANGE_COST{"prediction_change_cost"};
const std::string CDataFrameTrainBoostedTreeRunner::TREE_TOPOLOGY_CHANGE_PENALTY{"tree_topology_change_penalty"};
const std::string CDataFrameTrainBoostedTreeRunner::TRAINED_MODEL_MEMORY_USAGE{"trained_model_memory_usage"};
const std::string CDataFrameTrainBoostedTreeRunner::NUM_HOLDOUT_ROWS{"num_holdout_rows"};
const std::string CDataFrameTrainBoostedTreeRunner::NUM_FOLDS{"num_folds"};
const std::string CDataFrameTrainBoostedTreeRunner::TRAIN_FRACTION_PER_FOLD{"train_fraction_per_fold"};
const std::string CDataFrameTrainBoostedTreeRunner::STOP_CROSS_VALIDATION_EARLY{"stop_cross_validation_early"};
const std::string CDataFrameTrainBoostedTreeRunner::MAX_OPTIMIZATION_ROUNDS_PER_HYPERPARAMETER{"max_optimization_rounds_per_hyperparameter"};
const std::string CDataFrameTrainBoostedTreeRunner::BAYESIAN_OPTIMISATION_RESTARTS{"bayesian_optimisation_restarts"};
const std::string CDataFrameTrainBoostedTreeRunner::NUM_TOP_FEATURE_IMPORTANCE_VALUES{"num_top_feature_importance_values"};
const std::string CDataFrameTrainBoostedTreeRunner::IS_TRAINING_FIELD_NAME{"is_training"};
const std::string CDataFrameTrainBoostedTreeRunner::FEATURE_NAME_FIELD_NAME{"feature_name"};
const std::string CDataFrameTrainBoostedTreeRunner::IMPORTANCE_FIELD_NAME{"importance"};
const std::string CDataFrameTrainBoostedTreeRunner::FEATURE_IMPORTANCE_FIELD_NAME{"feature_importance"};
const std::string CDataFrameTrainBoostedTreeRunner::FEATURE_PROCESSORS{"feature_processors"};
const std::string CDataFrameTrainBoostedTreeRunner::EARLY_STOPPING_ENABLED{"early_stopping_enabled"};
const std::string CDataFrameTrainBoostedTreeRunner::FORCE_ACCEPT_INCREMENTAL_TRAINING{"force_accept_incremental_training"};
const std::string CDataFrameTrainBoostedTreeRunner::DISABLE_HYPERPARAMETER_SCALING{"disable_hyperparameter_scaling"};
const std::string CDataFrameTrainBoostedTreeRunner::DATA_SUMMARIZATION_FRACTION{"data_summarization_fraction"};
const std::string CDataFrameTrainBoostedTreeRunner::TASK{"task"};
const std::string CDataFrameTrainBoostedTreeRunner::TASK_ENCODE{"encode"};
const std::string CDataFrameTrainBoostedTreeRunner::TASK_TRAIN{"train"};
const std::string CDataFrameTrainBoostedTreeRunner::TASK_UPDATE{"update"};
const std::string CDataFrameTrainBoostedTreeRunner::TASK_PREDICT{"predict"};
const std::string CDataFrameTrainBoostedTreeRunner::PREVIOUS_TRAIN_LOSS_GAP{"previous_train_loss_gap"};
const std::string CDataFrameTrainBoostedTreeRunner::PREVIOUS_TRAIN_NUM_ROWS{"previous_train_num_rows"};
const std::string CDataFrameTrainBoostedTreeRunner::MAX_NUM_NEW_TREES{"max_num_new_trees"};
const std::string CDataFrameTrainBoostedTreeRunner::ROW_WEIGHT_COLUMN{"weight_column"};
// clang-format on
}
}