Skip to content
This repository was archived by the owner on May 18, 2026. It is now read-only.
This repository was archived by the owner on May 18, 2026. It is now read-only.

Error: number of columns in the file are less than expected in vcf - there are valid vcf files with just 8 parameters #16

@a4xrbj1

Description

@a4xrbj1

Please see the attached file format of the Build 37 human genome reference file:

image link

It consists of the following parameters:

#CHROM
POS
ID
REF
ALT
QUAL
FILTER
INFO

This is a valid VCF file, downloaded from Download link

Line 76 in /lib/index.js should have the number 9 change 8 instead:

if (info.length < 9) {

Line 82 in /lib/index.js should also change the number 8 to 7:

var formatIds = info[7].split(':')

to avoid this error thrown. Thank you!

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Type

    No type
    No fields configured for issues without a type.

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions