The Package install problem

[geophysicsman]

Hello,I encountered some prolbem in installing the package,the message is below:

**Collecting pyekfmm
Using cached pyekfmm-0.0.8.7.tar.gz (35 kB)
Preparing metadata (setup.py): started
Preparing metadata (setup.py): finished with status 'done'
Requirement already satisfied: numpy in f:\dl_code\newfile\radonproject.venv\lib\site-packages (from pyekfmm) (1.22.0)
Requirement already satisfied: scipy in f:\dl_code\newfile\radonproject.venv\lib\site-packages (from pyekfmm) (1.10.1)
Requirement already satisfied: matplotlib in f:\dl_code\newfile\radonproject.venv\lib\site-packages (from pyekfmm) (3.7.5)
Requirement already satisfied: contourpy>=1.0.1 in f:\dl_code\newfile\radonproject.venv\lib\site-packages (from matplotlib->pyekfmm) (1.1.1)
Requirement already satisfied: cycler>=0.10 in f:\dl_code\newfile\radonproject.venv\lib\site-packages (from matplotlib->pyekfmm) (0.12.1)
Requirement already satisfied: fonttools>=4.22.0 in f:\dl_code\newfile\radonproject.venv\lib\site-packages (from matplotlib->pyekfmm) (4.54.1)
Requirement already satisfied: kiwisolver>=1.0.1 in f:\dl_code\newfile\radonproject.venv\lib\site-packages (from matplotlib->pyekfmm) (1.4.7)
Requirement already satisfied: packaging>=20.0 in f:\dl_code\newfile\radonproject.venv\lib\site-packages (from matplotlib->pyekfmm) (24.1)
Requirement already satisfied: pillow>=6.2.0 in f:\dl_code\newfile\radonproject.venv\lib\site-packages (from matplotlib->pyekfmm) (10.4.0)
Requirement already satisfied: pyparsing>=2.3.1 in f:\dl_code\newfile\radonproject.venv\lib\site-packages (from matplotlib->pyekfmm) (3.1.4)
Requirement already satisfied: python-dateutil>=2.7 in f:\dl_code\newfile\radonproject.venv\lib\site-packages (from matplotlib->pyekfmm) (2.9.0.post0)
Requirement already satisfied: importlib-resources>=3.2.0 in f:\dl_code\newfile\radonproject.venv\lib\site-packages (from matplotlib->pyekfmm) (6.4.5)
Requirement already satisfied: zipp>=3.1.0 in f:\dl_code\newfile\radonproject.venv\lib\site-packages (from importlib-resources>=3.2.0->matplotlib->pyekfmm) (3.20.2)
Requirement already satisfied: six>=1.5 in f:\dl_code\newfile\radonproject.venv\lib\site-packages (from python-dateutil>=2.7->matplotlib->pyekfmm) (1.16.0)
Building wheels for collected packages: pyekfmm
Building wheel for pyekfmm (setup.py): started
Building wheel for pyekfmm (setup.py): finished with status 'error'
Running setup.py clean for pyekfmm
Failed to build pyekfmm

error: subprocess-exited-with-error

python setup.py bdist_wheel did not run successfully.
exit code: 1

[64 lines of output]
running bdist_wheel
running build
running build_py
creating build\lib.win-amd64-cpython-38\pyekfmm
copying pyekfmm\fmm.py -> build\lib.win-amd64-cpython-38\pyekfmm
copying pyekfmm\fmmvti.py -> build\lib.win-amd64-cpython-38\pyekfmm
copying pyekfmm\plot.py -> build\lib.win-amd64-cpython-38\pyekfmm
copying pyekfmm\stream.py -> build\lib.win-amd64-cpython-38\pyekfmm
copying pyekfmm_init_.py -> build\lib.win-amd64-cpython-38\pyekfmm
running egg_info
writing pyekfmm.egg-info\PKG-INFO
writing dependency_links to pyekfmm.egg-info\dependency_links.txt
writing requirements to pyekfmm.egg-info\requires.txt
writing top-level names to pyekfmm.egg-info\top_level.txt
reading manifest file 'pyekfmm.egg-info\SOURCES.txt'
adding license file 'LICENSE'
writing manifest file 'pyekfmm.egg-info\SOURCES.txt'
F:\DL_code\Newfile\RadonProject.venv\lib\site-packages\setuptools\command\build_py.py:218: _Warning: Package 'pyekfmm.src' is absent from the packages configuration.
!!

      ********************************************************************************
      ############################
      # Package would be ignored #
      ############################
      Python recognizes 'pyekfmm.src' as an importable package[^1],
      but it is absent from setuptools' `packages` configuration.

      This leads to an ambiguous overall configuration. If you want to distribute this
      package, please make sure that 'pyekfmm.src' is explicitly added
      to the `packages` configuration field.

      Alternatively, you can also rely on setuptools' discovery methods
      (for example by using `find_namespace_packages(...)`/`find_namespace:`
      instead of `find_packages(...)`/`find:`).

      You can read more about "package discovery" on setuptools documentation page:

      - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

      If you don't want 'pyekfmm.src' to be distributed and are
      already explicitly excluding 'pyekfmm.src' via
      `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
      you can try to use `exclude_package_data`, or `include-package-data=False` in
      combination with a more fine grained `package-data` configuration.

      You can read more about "package data files" on setuptools documentation page:

      - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


      [^1]: For Python, any directory (with suitable naming) can be imported,
            even if it does not contain any `.py` files.
            On the other hand, currently there is no concept of package data
            directory, all directories are treated like packages.
      ********************************************************************************

!!
check.warn(importable)
creating build\lib.win-amd64-cpython-38\pyekfmm\src
copying pyekfmm\src\eikonal.c -> build\lib.win-amd64-cpython-38\pyekfmm\src
copying pyekfmm\src\eikonalvti.c -> build\lib.win-amd64-cpython-38\pyekfmm\src
running build_ext
building 'eikonalc' extension
error: Microsoft Visual C++ 14.0 or greater is required. Get it with "Microsoft C++ Build Tools": https://visualstudio.microsoft.com/visual-cpp-build-tools/
[end of output]

note: This error originates from a subprocess, and is likely not a problem with pip.
ERROR: Failed building wheel for pyekfmm
ERROR: ERROR: Failed to build installable wheels for some pyproject.toml based projects (pyekfmm)**

Therefore, I would like to seek your help and am extremely grateful for it.
Thank you sir!

[chenyk1990]

Thanks for your interest. It seems that the machine is windows. Please try it again on Mac/Linux machines. Windows is not easily supported for the current version. Or you can use "Microsoft C++ Build Tools". ideally, it should work. YC

…

On Thu, Oct 10, 2024 at 9:30 PM geophysicsman ***@***.***> wrote: Hello,I encountered some prolbem in installing the package,the message is below: **Collecting pyekfmm Using cached pyekfmm-0.0.8.7.tar.gz (35 kB) Preparing metadata (setup.py): started Preparing metadata (setup.py): finished with status 'done' Requirement already satisfied: numpy in f:\dl_code\newfile\radonproject.venv\lib\site-packages (from pyekfmm) (1.22.0) Requirement already satisfied: scipy in f:\dl_code\newfile\radonproject.venv\lib\site-packages (from pyekfmm) (1.10.1) Requirement already satisfied: matplotlib in f:\dl_code\newfile\radonproject.venv\lib\site-packages (from pyekfmm) (3.7.5) Requirement already satisfied: contourpy>=1.0.1 in f:\dl_code\newfile\radonproject.venv\lib\site-packages (from matplotlib->pyekfmm) (1.1.1) Requirement already satisfied: cycler>=0.10 in f:\dl_code\newfile\radonproject.venv\lib\site-packages (from matplotlib->pyekfmm) (0.12.1) Requirement already satisfied: fonttools>=4.22.0 in f:\dl_code\newfile\radonproject.venv\lib\site-packages (from matplotlib->pyekfmm) (4.54.1) Requirement already satisfied: kiwisolver>=1.0.1 in f:\dl_code\newfile\radonproject.venv\lib\site-packages (from matplotlib->pyekfmm) (1.4.7) Requirement already satisfied: packaging>=20.0 in f:\dl_code\newfile\radonproject.venv\lib\site-packages (from matplotlib->pyekfmm) (24.1) Requirement already satisfied: pillow>=6.2.0 in f:\dl_code\newfile\radonproject.venv\lib\site-packages (from matplotlib->pyekfmm) (10.4.0) Requirement already satisfied: pyparsing>=2.3.1 in f:\dl_code\newfile\radonproject.venv\lib\site-packages (from matplotlib->pyekfmm) (3.1.4) Requirement already satisfied: python-dateutil>=2.7 in f:\dl_code\newfile\radonproject.venv\lib\site-packages (from matplotlib->pyekfmm) (2.9.0.post0) Requirement already satisfied: importlib-resources>=3.2.0 in f:\dl_code\newfile\radonproject.venv\lib\site-packages (from matplotlib->pyekfmm) (6.4.5) Requirement already satisfied: zipp>=3.1.0 in f:\dl_code\newfile\radonproject.venv\lib\site-packages (from importlib-resources>=3.2.0->matplotlib->pyekfmm) (3.20.2) Requirement already satisfied: six>=1.5 in f:\dl_code\newfile\radonproject.venv\lib\site-packages (from python-dateutil>=2.7->matplotlib->pyekfmm) (1.16.0) Building wheels for collected packages: pyekfmm Building wheel for pyekfmm (setup.py): started Building wheel for pyekfmm (setup.py): finished with status 'error' Running setup.py clean for pyekfmm Failed to build pyekfmm error: subprocess-exited-with-error python setup.py bdist_wheel did not run successfully. exit code: 1 [64 lines of output] running bdist_wheel running build running build_py creating build\lib.win-amd64-cpython-38\pyekfmm copying pyekfmm\fmm.py -> build\lib.win-amd64-cpython-38\pyekfmm copying pyekfmm\fmmvti.py -> build\lib.win-amd64-cpython-38\pyekfmm copying pyekfmm\plot.py -> build\lib.win-amd64-cpython-38\pyekfmm copying pyekfmm\stream.py -> build\lib.win-amd64-cpython-38\pyekfmm copying pyekfmm_*init*_.py -> build\lib.win-amd64-cpython-38\pyekfmm running egg_info writing pyekfmm.egg-info\PKG-INFO writing dependency_links to pyekfmm.egg-info\dependency_links.txt writing requirements to pyekfmm.egg-info\requires.txt writing top-level names to pyekfmm.egg-info\top_level.txt reading manifest file 'pyekfmm.egg-info\SOURCES.txt' adding license file 'LICENSE' writing manifest file 'pyekfmm.egg-info\SOURCES.txt' F:\DL_code\Newfile\RadonProject.venv\lib\site-packages\setuptools\command\build_py.py:218: _Warning: Package 'pyekfmm.src' is absent from the packages configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'pyekfmm.src' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'pyekfmm.src' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'pyekfmm.src' to be distributed and are already explicitly excluding 'pyekfmm.src' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) creating build\lib.win-amd64-cpython-38\pyekfmm\src copying pyekfmm\src\eikonal.c -> build\lib.win-amd64-cpython-38\pyekfmm\src copying pyekfmm\src\eikonalvti.c -> build\lib.win-amd64-cpython-38\pyekfmm\src running build_ext building 'eikonalc' extension error: Microsoft Visual C++ 14.0 or greater is required. Get it with "Microsoft C++ Build Tools": https://visualstudio.microsoft.com/visual-cpp-build-tools/ [end of output] note: This error originates from a subprocess, and is likely not a problem with pip. ERROR: Failed building wheel for pyekfmm ERROR: ERROR: Failed to build installable wheels for some pyproject.toml based projects (pyekfmm)** Therefore, I would like to seek your help and am extremely grateful for it. Thank you sir! — Reply to this email directly, view it on GitHub <#8>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ADHCWEXIBW7VD7HNAX56BXDZ24Z4ZAVCNFSM6AAAAABPX7ZBICVHI2DSMVQWIX3LMV43ASLTON2WKOZSGU4DAMRWHE2TMOI> . You are receiving this because you are subscribed to this thread.Message ID: ***@***.***>

[geophysicsman]

Thank you sir! When I installed it on a Linux system, this issue was resolved.

[saeedsltm]

Dear @chenyk1990 when installing on fedora 40, the following error occurred:

saeed@c52201:~/Work/moradi/v2$ pip install pyekfmm --user -U
Collecting pyekfmm
  Downloading pyekfmm-0.0.8.7.tar.gz (35 kB)
  Preparing metadata (setup.py) ... done
Requirement already satisfied: numpy in /home/saeed/.local/lib/python3.10/site-packages (from pyekfmm) (1.26.4)
Requirement already satisfied: scipy in /home/saeed/.local/lib/python3.10/site-packages (from pyekfmm) (1.14.1)
Requirement already satisfied: matplotlib in /home/saeed/.local/lib/python3.10/site-packages (from pyekfmm) (3.4.3)
Requirement already satisfied: cycler>=0.10 in /home/saeed/.local/lib/python3.10/site-packages (from matplotlib->pyekfmm) (0.12.1)
Requirement already satisfied: kiwisolver>=1.0.1 in /home/saeed/.local/lib/python3.10/site-packages (from matplotlib->pyekfmm) (1.4.5)
Requirement already satisfied: pillow>=6.2.0 in /home/saeed/.local/lib/python3.10/site-packages (from matplotlib->pyekfmm) (10.4.0)
Requirement already satisfied: pyparsing>=2.2.1 in /home/saeed/.local/lib/python3.10/site-packages (from matplotlib->pyekfmm) (3.1.4)
Requirement already satisfied: python-dateutil>=2.7 in /home/saeed/.local/lib/python3.10/site-packages (from matplotlib->pyekfmm) (2.9.0.post0)
Requirement already satisfied: six>=1.5 in /home/saeed/.local/lib/python3.10/site-packages (from python-dateutil>=2.7->matplotlib->pyekfmm) (1.16.0)
Building wheels for collected packages: pyekfmm
  Building wheel for pyekfmm (setup.py) ... error
  error: subprocess-exited-with-error
  
  × python setup.py bdist_wheel did not run successfully.
  │ exit code: 1
  ╰─> [193 lines of output]
      running bdist_wheel
      running build
      running build_py
      creating build
      creating build/lib.linux-x86_64-cpython-310
      creating build/lib.linux-x86_64-cpython-310/pyekfmm
      copying pyekfmm/__init__.py -> build/lib.linux-x86_64-cpython-310/pyekfmm
      copying pyekfmm/fmm.py -> build/lib.linux-x86_64-cpython-310/pyekfmm
      copying pyekfmm/fmmvti.py -> build/lib.linux-x86_64-cpython-310/pyekfmm
      copying pyekfmm/plot.py -> build/lib.linux-x86_64-cpython-310/pyekfmm
      copying pyekfmm/stream.py -> build/lib.linux-x86_64-cpython-310/pyekfmm
      running egg_info
      writing pyekfmm.egg-info/PKG-INFO
      writing dependency_links to pyekfmm.egg-info/dependency_links.txt
      writing requirements to pyekfmm.egg-info/requires.txt
      writing top-level names to pyekfmm.egg-info/top_level.txt
      reading manifest file 'pyekfmm.egg-info/SOURCES.txt'
      adding license file 'LICENSE'
      writing manifest file 'pyekfmm.egg-info/SOURCES.txt'
      /home/saeed/.local/lib/python3.10/site-packages/setuptools/command/build_py.py:218: _Warning: Package 'pyekfmm.src' is absent from the `packages` configuration.
      !!
      
              ********************************************************************************
              ############################
              # Package would be ignored #
              ############################
              Python recognizes 'pyekfmm.src' as an importable package[^1],
              but it is absent from setuptools' `packages` configuration.
      
              This leads to an ambiguous overall configuration. If you want to distribute this
              package, please make sure that 'pyekfmm.src' is explicitly added
              to the `packages` configuration field.
      
              Alternatively, you can also rely on setuptools' discovery methods
              (for example by using `find_namespace_packages(...)`/`find_namespace:`
              instead of `find_packages(...)`/`find:`).
      
              You can read more about "package discovery" on setuptools documentation page:
      
              - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
      
              If you don't want 'pyekfmm.src' to be distributed and are
              already explicitly excluding 'pyekfmm.src' via
              `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
              you can try to use `exclude_package_data`, or `include-package-data=False` in
              combination with a more fine grained `package-data` configuration.
      
              You can read more about "package data files" on setuptools documentation page:
      
              - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
      
      
              [^1]: For Python, any directory (with suitable naming) can be imported,
                    even if it does not contain any `.py` files.
                    On the other hand, currently there is no concept of package data
                    directory, all directories are treated like packages.
              ********************************************************************************
      
      !!
        check.warn(importable)
      creating build/lib.linux-x86_64-cpython-310/pyekfmm/src
      copying pyekfmm/src/eikonal.c -> build/lib.linux-x86_64-cpython-310/pyekfmm/src
      copying pyekfmm/src/eikonalvti.c -> build/lib.linux-x86_64-cpython-310/pyekfmm/src
      running build_ext
      building 'eikonalc' extension
      creating build/temp.linux-x86_64-cpython-310
      creating build/temp.linux-x86_64-cpython-310/pyekfmm
      creating build/temp.linux-x86_64-cpython-310/pyekfmm/src
      gcc -Wno-unused-result -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -fcf-protection -fexceptions -fcf-protection -fexceptions -fcf-protection -fexceptions -fPIC -I/home/saeed/.local/lib/python3.10/site-packages/numpy/core/include -I/usr/include/python3.10 -c pyekfmm/src/eikonal.c -o build/temp.linux-x86_64-cpython-310/pyekfmm/src/eikonal.o
      In file included from /home/saeed/.local/lib/python3.10/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
                       from /home/saeed/.local/lib/python3.10/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
                       from /home/saeed/.local/lib/python3.10/site-packages/numpy/core/include/numpy/arrayobject.h:5,
                       from pyekfmm/src/eikonal.c:6:
      /home/saeed/.local/lib/python3.10/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
         17 | #warning "Using deprecated NumPy API, disable it with " \
            |  ^~~~~~~
      pyekfmm/src/eikonal.c: In function ‘eikonalc_oneshot’:
      pyekfmm/src/eikonal.c:690:32: error: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types]
        690 |     npy_intp *sp=PyArray_SHAPE(arr1);
            |                                ^~~~
            |                                |
            |                                PyObject * {aka struct _object *}
      /home/saeed/.local/lib/python3.10/site-packages/numpy/core/include/numpy/ndarraytypes.h:1636:30: note: expected ‘PyArrayObject *’ {aka ‘struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
       1636 | PyArray_SHAPE(PyArrayObject *arr)
            |               ~~~~~~~~~~~~~~~^~~
      pyekfmm/src/eikonal.c:723:11: error: assignment to ‘int *’ from incompatible pointer type ‘float *’ [-Wincompatible-pointer-types]
        723 |         p = (float*)malloc(n123 * sizeof(float));
            |           ^
      pyekfmm/src/eikonal.c: In function ‘eikonalc_oneshot_angle’:
      pyekfmm/src/eikonal.c:814:32: error: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types]
        814 |     npy_intp *sp=PyArray_SHAPE(arr1);
            |                                ^~~~
            |                                |
            |                                PyObject * {aka struct _object *}
      /home/saeed/.local/lib/python3.10/site-packages/numpy/core/include/numpy/ndarraytypes.h:1636:30: note: expected ‘PyArrayObject *’ {aka ‘struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
       1636 | PyArray_SHAPE(PyArrayObject *arr)
            |               ~~~~~~~~~~~~~~~^~~
      pyekfmm/src/eikonal.c:849:11: error: assignment to ‘int *’ from incompatible pointer type ‘float *’ [-Wincompatible-pointer-types]
        849 |         p = (float*)malloc(n123 * sizeof(float));
            |           ^
      pyekfmm/src/eikonal.c: In function ‘eikonalc_multishots’:
      pyekfmm/src/eikonal.c:1052:32: error: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types]
       1052 |     npy_intp *sp=PyArray_SHAPE(arr1);
            |                                ^~~~
            |                                |
            |                                PyObject * {aka struct _object *}
      /home/saeed/.local/lib/python3.10/site-packages/numpy/core/include/numpy/ndarraytypes.h:1636:30: note: expected ‘PyArrayObject *’ {aka ‘struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
       1636 | PyArray_SHAPE(PyArrayObject *arr)
            |               ~~~~~~~~~~~~~~~^~~
      pyekfmm/src/eikonal.c:1053:35: error: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types]
       1053 |     npy_intp *spxyz=PyArray_SHAPE(arrf1);
            |                                   ^~~~~
            |                                   |
            |                                   PyObject * {aka struct _object *}
      /home/saeed/.local/lib/python3.10/site-packages/numpy/core/include/numpy/ndarraytypes.h:1636:30: note: expected ‘PyArrayObject *’ {aka ‘struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
       1636 | PyArray_SHAPE(PyArrayObject *arr)
            |               ~~~~~~~~~~~~~~~^~~
      pyekfmm/src/eikonal.c:1081:11: error: assignment to ‘int *’ from incompatible pointer type ‘float *’ [-Wincompatible-pointer-types]
       1081 |         p = (float*)malloc(n123 * sizeof(float));
            |           ^
      pyekfmm/src/eikonal.c: In function ‘eikonalc_multishots_angle’:
      pyekfmm/src/eikonal.c:1191:32: error: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types]
       1191 |     npy_intp *sp=PyArray_SHAPE(arr1);
            |                                ^~~~
            |                                |
            |                                PyObject * {aka struct _object *}
      /home/saeed/.local/lib/python3.10/site-packages/numpy/core/include/numpy/ndarraytypes.h:1636:30: note: expected ‘PyArrayObject *’ {aka ‘struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
       1636 | PyArray_SHAPE(PyArrayObject *arr)
            |               ~~~~~~~~~~~~~~~^~~
      pyekfmm/src/eikonal.c:1192:35: error: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types]
       1192 |     npy_intp *spxyz=PyArray_SHAPE(arrf1);
            |                                   ^~~~~
            |                                   |
            |                                   PyObject * {aka struct _object *}
      /home/saeed/.local/lib/python3.10/site-packages/numpy/core/include/numpy/ndarraytypes.h:1636:30: note: expected ‘PyArrayObject *’ {aka ‘struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
       1636 | PyArray_SHAPE(PyArrayObject *arr)
            |               ~~~~~~~~~~~~~~~^~~
      pyekfmm/src/eikonal.c:1222:11: error: assignment to ‘int *’ from incompatible pointer type ‘float *’ [-Wincompatible-pointer-types]
       1222 |         p = (float*)malloc(n123 * sizeof(float));
            |           ^
      pyekfmm/src/eikonal.c: In function ‘eikonalc_surf’:
      pyekfmm/src/eikonal.c:1375:32: error: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types]
       1375 |     npy_intp *sp=PyArray_SHAPE(arr1);
            |                                ^~~~
            |                                |
            |                                PyObject * {aka struct _object *}
      /home/saeed/.local/lib/python3.10/site-packages/numpy/core/include/numpy/ndarraytypes.h:1636:30: note: expected ‘PyArrayObject *’ {aka ‘struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
       1636 | PyArray_SHAPE(PyArrayObject *arr)
            |               ~~~~~~~~~~~~~~~^~~
      pyekfmm/src/eikonal.c:1376:35: error: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types]
       1376 |     npy_intp *spxyz=PyArray_SHAPE(arrf1);
            |                                   ^~~~~
            |                                   |
            |                                   PyObject * {aka struct _object *}
      /home/saeed/.local/lib/python3.10/site-packages/numpy/core/include/numpy/ndarraytypes.h:1636:30: note: expected ‘PyArrayObject *’ {aka ‘struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
       1636 | PyArray_SHAPE(PyArrayObject *arr)
            |               ~~~~~~~~~~~~~~~^~~
      pyekfmm/src/eikonal.c:1403:11: error: assignment to ‘int *’ from incompatible pointer type ‘float *’ [-Wincompatible-pointer-types]
       1403 |         p = (float*)malloc(n123 * sizeof(float));
            |           ^
      pyekfmm/src/eikonal.c: In function ‘eikonalc_oneshot_rtp’:
      pyekfmm/src/eikonal.c:1516:32: error: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types]
       1516 |     npy_intp *sp=PyArray_SHAPE(arr1);
            |                                ^~~~
            |                                |
            |                                PyObject * {aka struct _object *}
      /home/saeed/.local/lib/python3.10/site-packages/numpy/core/include/numpy/ndarraytypes.h:1636:30: note: expected ‘PyArrayObject *’ {aka ‘struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
       1636 | PyArray_SHAPE(PyArrayObject *arr)
            |               ~~~~~~~~~~~~~~~^~~
      pyekfmm/src/eikonal.c:1549:11: error: assignment to ‘int *’ from incompatible pointer type ‘float *’ [-Wincompatible-pointer-types]
       1549 |         p = (float*)malloc(n123 * sizeof(float));
            |           ^
      pyekfmm/src/eikonal.c: In function ‘eikonalc_multishots_rtp’:
      pyekfmm/src/eikonal.c:1646:32: error: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types]
       1646 |     npy_intp *sp=PyArray_SHAPE(arr1);
            |                                ^~~~
            |                                |
            |                                PyObject * {aka struct _object *}
      /home/saeed/.local/lib/python3.10/site-packages/numpy/core/include/numpy/ndarraytypes.h:1636:30: note: expected ‘PyArrayObject *’ {aka ‘struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
       1636 | PyArray_SHAPE(PyArrayObject *arr)
            |               ~~~~~~~~~~~~~~~^~~
      pyekfmm/src/eikonal.c:1647:35: error: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types]
       1647 |     npy_intp *spxyz=PyArray_SHAPE(arrf1);
            |                                   ^~~~~
            |                                   |
            |                                   PyObject * {aka struct _object *}
      /home/saeed/.local/lib/python3.10/site-packages/numpy/core/include/numpy/ndarraytypes.h:1636:30: note: expected ‘PyArrayObject *’ {aka ‘struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
       1636 | PyArray_SHAPE(PyArrayObject *arr)
            |               ~~~~~~~~~~~~~~~^~~
      pyekfmm/src/eikonal.c:1675:11: error: assignment to ‘int *’ from incompatible pointer type ‘float *’ [-Wincompatible-pointer-types]
       1675 |         p = (float*)malloc(n123 * sizeof(float));
            |           ^
      error: command '/usr/bin/gcc' failed with exit code 1
      [end of output]
  
  note: This error originates from a subprocess, and is likely not a problem with pip.
  ERROR: Failed building wheel for pyekfmm
  Running setup.py clean for pyekfmm
Failed to build pyekfmm
ERROR: ERROR: Failed to build installable wheels for some pyproject.toml based projects (pyekfmm)

[chenyk1990]

Hi, Thanks for your feedback. Could you please try to update your system or (at least) the gcc compiler so that you use the latest compiler? If the problem persists after you update your gcc compiler, I'll help look into it. Regards, YC

…

On Sun, Nov 3, 2024 at 1:15 AM SaeedSLTM ***@***.***> wrote: Dear @chenyk1990 <https://github.com/chenyk1990> when installing on fedora 40, the following error occurred: ***@***.***:~/Work/moradi/v2$ pip install pyekfmm --user -U Collecting pyekfmm Downloading pyekfmm-0.0.8.7.tar.gz (35 kB) Preparing metadata (setup.py) ... done Requirement already satisfied: numpy in /home/saeed/.local/lib/python3.10/site-packages (from pyekfmm) (1.26.4) Requirement already satisfied: scipy in /home/saeed/.local/lib/python3.10/site-packages (from pyekfmm) (1.14.1) Requirement already satisfied: matplotlib in /home/saeed/.local/lib/python3.10/site-packages (from pyekfmm) (3.4.3) Requirement already satisfied: cycler>=0.10 in /home/saeed/.local/lib/python3.10/site-packages (from matplotlib->pyekfmm) (0.12.1) Requirement already satisfied: kiwisolver>=1.0.1 in /home/saeed/.local/lib/python3.10/site-packages (from matplotlib->pyekfmm) (1.4.5) Requirement already satisfied: pillow>=6.2.0 in /home/saeed/.local/lib/python3.10/site-packages (from matplotlib->pyekfmm) (10.4.0) Requirement already satisfied: pyparsing>=2.2.1 in /home/saeed/.local/lib/python3.10/site-packages (from matplotlib->pyekfmm) (3.1.4) Requirement already satisfied: python-dateutil>=2.7 in /home/saeed/.local/lib/python3.10/site-packages (from matplotlib->pyekfmm) (2.9.0.post0) Requirement already satisfied: six>=1.5 in /home/saeed/.local/lib/python3.10/site-packages (from python-dateutil>=2.7->matplotlib->pyekfmm) (1.16.0) Building wheels for collected packages: pyekfmm Building wheel for pyekfmm (setup.py) ... error error: subprocess-exited-with-error × python setup.py bdist_wheel did not run successfully. │ exit code: 1 ╰─> [193 lines of output] running bdist_wheel running build running build_py creating build creating build/lib.linux-x86_64-cpython-310 creating build/lib.linux-x86_64-cpython-310/pyekfmm copying pyekfmm/__init__.py -> build/lib.linux-x86_64-cpython-310/pyekfmm copying pyekfmm/fmm.py -> build/lib.linux-x86_64-cpython-310/pyekfmm copying pyekfmm/fmmvti.py -> build/lib.linux-x86_64-cpython-310/pyekfmm copying pyekfmm/plot.py -> build/lib.linux-x86_64-cpython-310/pyekfmm copying pyekfmm/stream.py -> build/lib.linux-x86_64-cpython-310/pyekfmm running egg_info writing pyekfmm.egg-info/PKG-INFO writing dependency_links to pyekfmm.egg-info/dependency_links.txt writing requirements to pyekfmm.egg-info/requires.txt writing top-level names to pyekfmm.egg-info/top_level.txt reading manifest file 'pyekfmm.egg-info/SOURCES.txt' adding license file 'LICENSE' writing manifest file 'pyekfmm.egg-info/SOURCES.txt' /home/saeed/.local/lib/python3.10/site-packages/setuptools/command/build_py.py:218: _Warning: Package 'pyekfmm.src' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'pyekfmm.src' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'pyekfmm.src' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'pyekfmm.src' to be distributed and are already explicitly excluding 'pyekfmm.src' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) creating build/lib.linux-x86_64-cpython-310/pyekfmm/src copying pyekfmm/src/eikonal.c -> build/lib.linux-x86_64-cpython-310/pyekfmm/src copying pyekfmm/src/eikonalvti.c -> build/lib.linux-x86_64-cpython-310/pyekfmm/src running build_ext building 'eikonalc' extension creating build/temp.linux-x86_64-cpython-310 creating build/temp.linux-x86_64-cpython-310/pyekfmm creating build/temp.linux-x86_64-cpython-310/pyekfmm/src gcc -Wno-unused-result -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -fcf-protection -fexceptions -fcf-protection -fexceptions -fcf-protection -fexceptions -fPIC -I/home/saeed/.local/lib/python3.10/site-packages/numpy/core/include -I/usr/include/python3.10 -c pyekfmm/src/eikonal.c -o build/temp.linux-x86_64-cpython-310/pyekfmm/src/eikonal.o In file included from /home/saeed/.local/lib/python3.10/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929, from /home/saeed/.local/lib/python3.10/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /home/saeed/.local/lib/python3.10/site-packages/numpy/core/include/numpy/arrayobject.h:5, from pyekfmm/src/eikonal.c:6: /home/saeed/.local/lib/python3.10/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ pyekfmm/src/eikonal.c: In function ‘eikonalc_oneshot’: pyekfmm/src/eikonal.c:690:32: error: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types] 690 | npy_intp *sp=PyArray_SHAPE(arr1); | ^~~~ | | | PyObject * {aka struct _object *} /home/saeed/.local/lib/python3.10/site-packages/numpy/core/include/numpy/ndarraytypes.h:1636:30: note: expected ‘PyArrayObject *’ {aka ‘struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1636 | PyArray_SHAPE(PyArrayObject *arr) | ~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:723:11: error: assignment to ‘int *’ from incompatible pointer type ‘float *’ [-Wincompatible-pointer-types] 723 | p = (float*)malloc(n123 * sizeof(float)); | ^ pyekfmm/src/eikonal.c: In function ‘eikonalc_oneshot_angle’: pyekfmm/src/eikonal.c:814:32: error: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types] 814 | npy_intp *sp=PyArray_SHAPE(arr1); | ^~~~ | | | PyObject * {aka struct _object *} /home/saeed/.local/lib/python3.10/site-packages/numpy/core/include/numpy/ndarraytypes.h:1636:30: note: expected ‘PyArrayObject *’ {aka ‘struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1636 | PyArray_SHAPE(PyArrayObject *arr) | ~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:849:11: error: assignment to ‘int *’ from incompatible pointer type ‘float *’ [-Wincompatible-pointer-types] 849 | p = (float*)malloc(n123 * sizeof(float)); | ^ pyekfmm/src/eikonal.c: In function ‘eikonalc_multishots’: pyekfmm/src/eikonal.c:1052:32: error: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types] 1052 | npy_intp *sp=PyArray_SHAPE(arr1); | ^~~~ | | | PyObject * {aka struct _object *} /home/saeed/.local/lib/python3.10/site-packages/numpy/core/include/numpy/ndarraytypes.h:1636:30: note: expected ‘PyArrayObject *’ {aka ‘struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1636 | PyArray_SHAPE(PyArrayObject *arr) | ~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1053:35: error: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types] 1053 | npy_intp *spxyz=PyArray_SHAPE(arrf1); | ^~~~~ | | | PyObject * {aka struct _object *} /home/saeed/.local/lib/python3.10/site-packages/numpy/core/include/numpy/ndarraytypes.h:1636:30: note: expected ‘PyArrayObject *’ {aka ‘struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1636 | PyArray_SHAPE(PyArrayObject *arr) | ~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1081:11: error: assignment to ‘int *’ from incompatible pointer type ‘float *’ [-Wincompatible-pointer-types] 1081 | p = (float*)malloc(n123 * sizeof(float)); | ^ pyekfmm/src/eikonal.c: In function ‘eikonalc_multishots_angle’: pyekfmm/src/eikonal.c:1191:32: error: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types] 1191 | npy_intp *sp=PyArray_SHAPE(arr1); | ^~~~ | | | PyObject * {aka struct _object *} /home/saeed/.local/lib/python3.10/site-packages/numpy/core/include/numpy/ndarraytypes.h:1636:30: note: expected ‘PyArrayObject *’ {aka ‘struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1636 | PyArray_SHAPE(PyArrayObject *arr) | ~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1192:35: error: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types] 1192 | npy_intp *spxyz=PyArray_SHAPE(arrf1); | ^~~~~ | | | PyObject * {aka struct _object *} /home/saeed/.local/lib/python3.10/site-packages/numpy/core/include/numpy/ndarraytypes.h:1636:30: note: expected ‘PyArrayObject *’ {aka ‘struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1636 | PyArray_SHAPE(PyArrayObject *arr) | ~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1222:11: error: assignment to ‘int *’ from incompatible pointer type ‘float *’ [-Wincompatible-pointer-types] 1222 | p = (float*)malloc(n123 * sizeof(float)); | ^ pyekfmm/src/eikonal.c: In function ‘eikonalc_surf’: pyekfmm/src/eikonal.c:1375:32: error: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types] 1375 | npy_intp *sp=PyArray_SHAPE(arr1); | ^~~~ | | | PyObject * {aka struct _object *} /home/saeed/.local/lib/python3.10/site-packages/numpy/core/include/numpy/ndarraytypes.h:1636:30: note: expected ‘PyArrayObject *’ {aka ‘struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1636 | PyArray_SHAPE(PyArrayObject *arr) | ~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1376:35: error: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types] 1376 | npy_intp *spxyz=PyArray_SHAPE(arrf1); | ^~~~~ | | | PyObject * {aka struct _object *} /home/saeed/.local/lib/python3.10/site-packages/numpy/core/include/numpy/ndarraytypes.h:1636:30: note: expected ‘PyArrayObject *’ {aka ‘struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1636 | PyArray_SHAPE(PyArrayObject *arr) | ~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1403:11: error: assignment to ‘int *’ from incompatible pointer type ‘float *’ [-Wincompatible-pointer-types] 1403 | p = (float*)malloc(n123 * sizeof(float)); | ^ pyekfmm/src/eikonal.c: In function ‘eikonalc_oneshot_rtp’: pyekfmm/src/eikonal.c:1516:32: error: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types] 1516 | npy_intp *sp=PyArray_SHAPE(arr1); | ^~~~ | | | PyObject * {aka struct _object *} /home/saeed/.local/lib/python3.10/site-packages/numpy/core/include/numpy/ndarraytypes.h:1636:30: note: expected ‘PyArrayObject *’ {aka ‘struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1636 | PyArray_SHAPE(PyArrayObject *arr) | ~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1549:11: error: assignment to ‘int *’ from incompatible pointer type ‘float *’ [-Wincompatible-pointer-types] 1549 | p = (float*)malloc(n123 * sizeof(float)); | ^ pyekfmm/src/eikonal.c: In function ‘eikonalc_multishots_rtp’: pyekfmm/src/eikonal.c:1646:32: error: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types] 1646 | npy_intp *sp=PyArray_SHAPE(arr1); | ^~~~ | | | PyObject * {aka struct _object *} /home/saeed/.local/lib/python3.10/site-packages/numpy/core/include/numpy/ndarraytypes.h:1636:30: note: expected ‘PyArrayObject *’ {aka ‘struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1636 | PyArray_SHAPE(PyArrayObject *arr) | ~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1647:35: error: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types] 1647 | npy_intp *spxyz=PyArray_SHAPE(arrf1); | ^~~~~ | | | PyObject * {aka struct _object *} /home/saeed/.local/lib/python3.10/site-packages/numpy/core/include/numpy/ndarraytypes.h:1636:30: note: expected ‘PyArrayObject *’ {aka ‘struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1636 | PyArray_SHAPE(PyArrayObject *arr) | ~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1675:11: error: assignment to ‘int *’ from incompatible pointer type ‘float *’ [-Wincompatible-pointer-types] 1675 | p = (float*)malloc(n123 * sizeof(float)); | ^ error: command '/usr/bin/gcc' failed with exit code 1 [end of output] note: This error originates from a subprocess, and is likely not a problem with pip. ERROR: Failed building wheel for pyekfmm Running setup.py clean for pyekfmm Failed to build pyekfmm ERROR: ERROR: Failed to build installable wheels for some pyproject.toml based projects (pyekfmm) — Reply to this email directly, view it on GitHub <#8 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ADHCWET7LRCFNFE3GTW5AWLZ6XEPVAVCNFSM6AAAAABPX7ZBICVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMZDINJTGMZDGOJYGY> . You are receiving this because you were mentioned.Message ID: ***@***.***>

[saeedsltm]

After updating system here is the output of gcc --version:

saeed@c52201:~/Work/Khoursand/SyntSeis$ gcc --version
gcc (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)
Copyright (C) 2024 Free Software Foundation, Inc.
This is free software; see the source for copying conditions.  There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

and the same error appeared after "pip install pyekfmm --user -U"

[chenyk1990]

Please also try to use anaconda platform ( https://www.anaconda.com/download/success) to install and run the codes. You can first install anaconda on your local workstation, and then create an environment like conda create -n ekfmm python=3.10 pip install numpy pip install git+https://github.com/aaspip/pyekfmm Let me know if it works now. YC

…

On Sun, Nov 3, 2024 at 10:00 PM SaeedSLTM ***@***.***> wrote: After updating system here is the output of gcc --version: ***@***.***:~/Work/Khoursand/SyntSeis$ gcc --version gcc (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3) Copyright (C) 2024 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. and the same error appeared after "pip install pyekfmm --user -U" — Reply to this email directly, view it on GitHub <#8 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ADHCWEWEIP76LOMKI5RZL2LZ63WM7AVCNFSM6AAAAABPX7ZBICVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMZDINJTG44DKMBYGA> . You are receiving this because you were mentioned.Message ID: ***@***.***>

[0haolrving]

Hi there! I'm having trouble building the pyekfmm package due to an error related to NPY_IN_ARRAY being undeclared. Should I replace it with NPY_ARRAY_IN_ARRAY? Additionally, I'm seeing warnings about pyekfmm.src not being included in the package configuration.I am running this on Linux, and the relevant dependencies have already been updated. Could you provide guidance on how to resolve these issues? Thanks!

DEPRECATION: Building 'pyekfmm' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the --use-pep517 option, (possibly combined with --no-build-isolation), or adding a pyproject.toml file to the source tree of 'pyekfmm'. Discussion can be found at pypa/pip#6334
Building wheel for pyekfmm (setup.py) ... error
error: subprocess-exited-with-error

× python setup.py bdist_wheel did not run successfully.
│ exit code: 1
╰─> [703 lines of output]
/home/zj/miniconda3/lib/python3.13/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated.
!!

          ********************************************************************************
          Please consider removing the following classifiers in favor of a SPDX license expression:
  
          License :: OSI Approved :: GNU General Public License v3 (GPLv3)
  
          See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
          ********************************************************************************
  
  !!
    self._finalize_license_expression()
  running bdist_wheel
  running build
  running build_py
  creating build/lib.linux-x86_64-cpython-313/pyekfmm
  copying pyekfmm/__init__.py -> build/lib.linux-x86_64-cpython-313/pyekfmm
  copying pyekfmm/stream.py -> build/lib.linux-x86_64-cpython-313/pyekfmm
  copying pyekfmm/plot.py -> build/lib.linux-x86_64-cpython-313/pyekfmm
  copying pyekfmm/fmmvti.py -> build/lib.linux-x86_64-cpython-313/pyekfmm
  copying pyekfmm/fmm.py -> build/lib.linux-x86_64-cpython-313/pyekfmm
  running egg_info
  writing pyekfmm.egg-info/PKG-INFO
  writing dependency_links to pyekfmm.egg-info/dependency_links.txt
  writing requirements to pyekfmm.egg-info/requires.txt
  writing top-level names to pyekfmm.egg-info/top_level.txt
  reading manifest file 'pyekfmm.egg-info/SOURCES.txt'
  adding license file 'LICENSE'
  writing manifest file 'pyekfmm.egg-info/SOURCES.txt'
  /home/zj/miniconda3/lib/python3.13/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'pyekfmm.src' is absent from the `packages` configuration.
  !!
  
          ********************************************************************************
          ############################
          # Package would be ignored #
          ############################
          Python recognizes 'pyekfmm.src' as an importable package[^1],
          but it is absent from setuptools' `packages` configuration.
  
          This leads to an ambiguous overall configuration. If you want to distribute this
          package, please make sure that 'pyekfmm.src' is explicitly added
          to the `packages` configuration field.
  
          Alternatively, you can also rely on setuptools' discovery methods
          (for example by using `find_namespace_packages(...)`/`find_namespace:`
          instead of `find_packages(...)`/`find:`).
  
          You can read more about "package discovery" on setuptools documentation page:
  
          - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
  
          If you don't want 'pyekfmm.src' to be distributed and are
          already explicitly excluding 'pyekfmm.src' via
          `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
          you can try to use `exclude_package_data`, or `include-package-data=False` in
          combination with a more fine grained `package-data` configuration.
  
          You can read more about "package data files" on setuptools documentation page:
  
          - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
  
  
          [^1]: For Python, any directory (with suitable naming) can be imported,
                even if it does not contain any `.py` files.
                On the other hand, currently there is no concept of package data
                directory, all directories are treated like packages.
          ********************************************************************************
  
  !!
    check.warn(importable)
  creating build/lib.linux-x86_64-cpython-313/pyekfmm/src
  copying pyekfmm/src/eikonal.c -> build/lib.linux-x86_64-cpython-313/pyekfmm/src
  copying pyekfmm/src/eikonalvti.c -> build/lib.linux-x86_64-cpython-313/pyekfmm/src
  running build_ext
  building 'eikonalc' extension
  creating build/temp.linux-x86_64-cpython-313/pyekfmm/src
  gcc -pthread -B /home/zj/miniconda3/compiler_compat -fno-strict-overflow -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /home/zj/miniconda3/include -fPIC -O2 -isystem /home/zj/miniconda3/include -fPIC -I/home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include -I/home/zj/miniconda3/include/python3.13 -c pyekfmm/src/eikonal.c -o build/temp.linux-x86_64-cpython-313/pyekfmm/src/eikonal.o
  In file included from /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/arrayobject.h:5,
                   from pyekfmm/src/eikonal.c:6:
  pyekfmm/src/eikonal.c: In function ‘eikonalc_oneshot’:
  pyekfmm/src/eikonal.c:687:46: error: ‘NPY_IN_ARRAY’ undeclared (first use in this function)
    687 |     arr1 = PyArray_FROM_OTF(arg1, NPY_FLOAT, NPY_IN_ARRAY);
        |                                              ^~~~~~~~~~~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:91:28: note: in definition of macro ‘PyArray_FROM_OTF’
     91 |                         (((flags) & NPY_ARRAY_ENSURECOPY) ? \
        |                            ^~~~~
  pyekfmm/src/eikonal.c:687:46: note: each undeclared identifier is reported only once for each function it appears in
    687 |     arr1 = PyArray_FROM_OTF(arg1, NPY_FLOAT, NPY_IN_ARRAY);
        |                                              ^~~~~~~~~~~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:91:28: note: in definition of macro ‘PyArray_FROM_OTF’
     91 |                         (((flags) & NPY_ARRAY_ENSURECOPY) ? \
        |                            ^~~~~
  pyekfmm/src/eikonal.c:691:32: warning: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types]
    691 |     npy_intp *sp=PyArray_SHAPE(arr1);
        |                                ^~~~
        |                                |
        |                                PyObject * {aka struct _object *}
  In file included from /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:12:
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1585:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1585 | PyArray_SHAPE(const PyArrayObject *arr)
        |               ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c:713:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
    713 |     for (i = 0; i < nshot; i++)
        |     ^~~
  pyekfmm/src/eikonal.c:716:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
    716 |         s[0][0]=x;
        |         ^
  pyekfmm/src/eikonal.c:729:48: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘npy_intp’ {aka ‘long int’} [-Wformat=]
    729 |         printf("Dimension mismatch, N_input = %d, N_model = %d \n", *sp, n123);
        |                                               ~^                    ~~~
        |                                                |                    |
        |                                                int                  npy_intp {aka long int}
        |                                               %ld
  pyekfmm/src/eikonal.c:736:40: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types]
    736 |         v[i]=*((float*)PyArray_GETPTR1(arr1,i));
        |                                        ^~~~
        |                                        |
        |                                        PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’
    138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \
        |                                                         ^~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1518 | PyArray_BYTES(const PyArrayObject *arr)
        |               ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c:736:40: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types]
    736 |         v[i]=*((float*)PyArray_GETPTR1(arr1,i));
        |                                        ^~~~
        |                                        |
        |                                        PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’
    139 |                                          (i)*PyArray_STRIDES(obj)[0]))
        |                                                              ^~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1530 | PyArray_STRIDES(const PyArrayObject *arr)
        |                 ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c: In function ‘eikonalc_oneshot_angle’:
  pyekfmm/src/eikonal.c:809:46: error: ‘NPY_IN_ARRAY’ undeclared (first use in this function)
    809 |     arr1 = PyArray_FROM_OTF(arg1, NPY_FLOAT, NPY_IN_ARRAY);
        |                                              ^~~~~~~~~~~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:91:28: note: in definition of macro ‘PyArray_FROM_OTF’
     91 |                         (((flags) & NPY_ARRAY_ENSURECOPY) ? \
        |                            ^~~~~
  pyekfmm/src/eikonal.c:813:32: warning: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types]
    813 |     npy_intp *sp=PyArray_SHAPE(arr1);
        |                                ^~~~
        |                                |
        |                                PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1585:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1585 | PyArray_SHAPE(const PyArrayObject *arr)
        |               ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c:835:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
    835 |     for (i = 0; i < nshot; i++)
        |     ^~~
  pyekfmm/src/eikonal.c:838:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
    838 |         s[0][0]=x;
        |         ^
  pyekfmm/src/eikonal.c:853:48: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘npy_intp’ {aka ‘long int’} [-Wformat=]
    853 |         printf("Dimension mismatch, N_input = %d, N_model = %d \n", *sp, n123);
        |                                               ~^                    ~~~
        |                                                |                    |
        |                                                int                  npy_intp {aka long int}
        |                                               %ld
  pyekfmm/src/eikonal.c:860:40: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types]
    860 |         v[i]=*((float*)PyArray_GETPTR1(arr1,i));
        |                                        ^~~~
        |                                        |
        |                                        PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’
    138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \
        |                                                         ^~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1518 | PyArray_BYTES(const PyArrayObject *arr)
        |               ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c:860:40: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types]
    860 |         v[i]=*((float*)PyArray_GETPTR1(arr1,i));
        |                                        ^~~~
        |                                        |
        |                                        PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’
    139 |                                          (i)*PyArray_STRIDES(obj)[0]))
        |                                                              ^~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1530 | PyArray_STRIDES(const PyArrayObject *arr)
        |                 ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c: In function ‘eikonalc_multishots’:
  pyekfmm/src/eikonal.c:1041:46: error: ‘NPY_IN_ARRAY’ undeclared (first use in this function)
   1041 |     arr1 = PyArray_FROM_OTF(arg1, NPY_FLOAT, NPY_IN_ARRAY);
        |                                              ^~~~~~~~~~~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:91:28: note: in definition of macro ‘PyArray_FROM_OTF’
     91 |                         (((flags) & NPY_ARRAY_ENSURECOPY) ? \
        |                            ^~~~~
  pyekfmm/src/eikonal.c:1046:32: warning: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types]
   1046 |     npy_intp *sp=PyArray_SHAPE(arr1);
        |                                ^~~~
        |                                |
        |                                PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1585:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1585 | PyArray_SHAPE(const PyArrayObject *arr)
        |               ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c:1047:35: warning: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types]
   1047 |     npy_intp *spxyz=PyArray_SHAPE(arrf1);
        |                                   ^~~~~
        |                                   |
        |                                   PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1585:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1585 | PyArray_SHAPE(const PyArrayObject *arr)
        |               ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c:1080:48: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘npy_intp’ {aka ‘long int’} [-Wformat=]
   1080 |         printf("Dimension mismatch, N_input = %d, N_model = %d\n", *sp, n123);
        |                                               ~^                   ~~~
        |                                                |                   |
        |                                                int                 npy_intp {aka long int}
        |                                               %ld
  pyekfmm/src/eikonal.c:1087:40: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types]
   1087 |         v[i]=*((float*)PyArray_GETPTR1(arr1,i));
        |                                        ^~~~
        |                                        |
        |                                        PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’
    138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \
        |                                                         ^~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1518 | PyArray_BYTES(const PyArrayObject *arr)
        |               ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c:1087:40: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types]
   1087 |         v[i]=*((float*)PyArray_GETPTR1(arr1,i));
        |                                        ^~~~
        |                                        |
        |                                        PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’
    139 |                                          (i)*PyArray_STRIDES(obj)[0]))
        |                                                              ^~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1530 | PyArray_STRIDES(const PyArrayObject *arr)
        |                 ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c:1094:43: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types]
   1094 |         s[i][0]=*((float*)PyArray_GETPTR1(arrf1,i));
        |                                           ^~~~~
        |                                           |
        |                                           PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’
    138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \
        |                                                         ^~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1518 | PyArray_BYTES(const PyArrayObject *arr)
        |               ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c:1094:43: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types]
   1094 |         s[i][0]=*((float*)PyArray_GETPTR1(arrf1,i));
        |                                           ^~~~~
        |                                           |
        |                                           PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’
    139 |                                          (i)*PyArray_STRIDES(obj)[0]))
        |                                                              ^~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1530 | PyArray_STRIDES(const PyArrayObject *arr)
        |                 ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c:1095:43: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types]
   1095 |         s[i][1]=*((float*)PyArray_GETPTR1(arrf2,i));
        |                                           ^~~~~
        |                                           |
        |                                           PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’
    138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \
        |                                                         ^~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1518 | PyArray_BYTES(const PyArrayObject *arr)
        |               ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c:1095:43: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types]
   1095 |         s[i][1]=*((float*)PyArray_GETPTR1(arrf2,i));
        |                                           ^~~~~
        |                                           |
        |                                           PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’
    139 |                                          (i)*PyArray_STRIDES(obj)[0]))
        |                                                              ^~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1530 | PyArray_STRIDES(const PyArrayObject *arr)
        |                 ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c:1096:43: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types]
   1096 |         s[i][2]=*((float*)PyArray_GETPTR1(arrf3,i));
        |                                           ^~~~~
        |                                           |
        |                                           PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’
    138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \
        |                                                         ^~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1518 | PyArray_BYTES(const PyArrayObject *arr)
        |               ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c:1096:43: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types]
   1096 |         s[i][2]=*((float*)PyArray_GETPTR1(arrf3,i));
        |                                           ^~~~~
        |                                           |
        |                                           PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’
    139 |                                          (i)*PyArray_STRIDES(obj)[0]))
        |                                                              ^~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1530 | PyArray_STRIDES(const PyArrayObject *arr)
        |                 ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c: In function ‘eikonalc_multishots_angle’:
  pyekfmm/src/eikonal.c:1171:46: error: ‘NPY_IN_ARRAY’ undeclared (first use in this function)
   1171 |     arr1 = PyArray_FROM_OTF(arg1, NPY_FLOAT, NPY_IN_ARRAY);
        |                                              ^~~~~~~~~~~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:91:28: note: in definition of macro ‘PyArray_FROM_OTF’
     91 |                         (((flags) & NPY_ARRAY_ENSURECOPY) ? \
        |                            ^~~~~
  pyekfmm/src/eikonal.c:1176:32: warning: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types]
   1176 |     npy_intp *sp=PyArray_SHAPE(arr1);
        |                                ^~~~
        |                                |
        |                                PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1585:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1585 | PyArray_SHAPE(const PyArrayObject *arr)
        |               ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c:1177:35: warning: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types]
   1177 |     npy_intp *spxyz=PyArray_SHAPE(arrf1);
        |                                   ^~~~~
        |                                   |
        |                                   PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1585:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1585 | PyArray_SHAPE(const PyArrayObject *arr)
        |               ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c:1212:48: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘npy_intp’ {aka ‘long int’} [-Wformat=]
   1212 |         printf("Dimension mismatch, N_input = %d, N_model = %d\n", *sp, n123);
        |                                               ~^                   ~~~
        |                                                |                   |
        |                                                int                 npy_intp {aka long int}
        |                                               %ld
  pyekfmm/src/eikonal.c:1219:40: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types]
   1219 |         v[i]=*((float*)PyArray_GETPTR1(arr1,i));
        |                                        ^~~~
        |                                        |
        |                                        PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’
    138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \
        |                                                         ^~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1518 | PyArray_BYTES(const PyArrayObject *arr)
        |               ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c:1219:40: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types]
   1219 |         v[i]=*((float*)PyArray_GETPTR1(arr1,i));
        |                                        ^~~~
        |                                        |
        |                                        PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’
    139 |                                          (i)*PyArray_STRIDES(obj)[0]))
        |                                                              ^~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1530 | PyArray_STRIDES(const PyArrayObject *arr)
        |                 ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c:1226:43: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types]
   1226 |         s[i][0]=*((float*)PyArray_GETPTR1(arrf1,i));
        |                                           ^~~~~
        |                                           |
        |                                           PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’
    138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \
        |                                                         ^~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1518 | PyArray_BYTES(const PyArrayObject *arr)
        |               ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c:1226:43: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types]
   1226 |         s[i][0]=*((float*)PyArray_GETPTR1(arrf1,i));
        |                                           ^~~~~
        |                                           |
        |                                           PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’
    139 |                                          (i)*PyArray_STRIDES(obj)[0]))
        |                                                              ^~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1530 | PyArray_STRIDES(const PyArrayObject *arr)
        |                 ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c:1227:43: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types]
   1227 |         s[i][1]=*((float*)PyArray_GETPTR1(arrf2,i));
        |                                           ^~~~~
        |                                           |
        |                                           PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’
    138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \
        |                                                         ^~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1518 | PyArray_BYTES(const PyArrayObject *arr)
        |               ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c:1227:43: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types]
   1227 |         s[i][1]=*((float*)PyArray_GETPTR1(arrf2,i));
        |                                           ^~~~~
        |                                           |
        |                                           PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’
    139 |                                          (i)*PyArray_STRIDES(obj)[0]))
        |                                                              ^~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1530 | PyArray_STRIDES(const PyArrayObject *arr)
        |                 ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c:1228:43: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types]
   1228 |         s[i][2]=*((float*)PyArray_GETPTR1(arrf3,i));
        |                                           ^~~~~
        |                                           |
        |                                           PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’
    138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \
        |                                                         ^~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1518 | PyArray_BYTES(const PyArrayObject *arr)
        |               ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c:1228:43: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types]
   1228 |         s[i][2]=*((float*)PyArray_GETPTR1(arrf3,i));
        |                                           ^~~~~
        |                                           |
        |                                           PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’
    139 |                                          (i)*PyArray_STRIDES(obj)[0]))
        |                                                              ^~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1530 | PyArray_STRIDES(const PyArrayObject *arr)
        |                 ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c: In function ‘eikonalc_surf’:
  pyekfmm/src/eikonal.c:1346:46: error: ‘NPY_IN_ARRAY’ undeclared (first use in this function)
   1346 |     arr1 = PyArray_FROM_OTF(arg1, NPY_FLOAT, NPY_IN_ARRAY);
        |                                              ^~~~~~~~~~~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:91:28: note: in definition of macro ‘PyArray_FROM_OTF’
     91 |                         (((flags) & NPY_ARRAY_ENSURECOPY) ? \
        |                            ^~~~~
  pyekfmm/src/eikonal.c:1351:32: warning: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types]
   1351 |     npy_intp *sp=PyArray_SHAPE(arr1);
        |                                ^~~~
        |                                |
        |                                PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1585:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1585 | PyArray_SHAPE(const PyArrayObject *arr)
        |               ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c:1352:35: warning: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types]
   1352 |     npy_intp *spxyz=PyArray_SHAPE(arrf1);
        |                                   ^~~~~
        |                                   |
        |                                   PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1585:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1585 | PyArray_SHAPE(const PyArrayObject *arr)
        |               ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c:1383:48: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘npy_intp’ {aka ‘long int’} [-Wformat=]
   1383 |         printf("Dimension mismatch, N_input = %d, N_model = %d\n", *sp, n123);
        |                                               ~^                   ~~~
        |                                                |                   |
        |                                                int                 npy_intp {aka long int}
        |                                               %ld
  pyekfmm/src/eikonal.c:1390:40: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types]
   1390 |         v[i]=*((float*)PyArray_GETPTR1(arr1,i));
        |                                        ^~~~
        |                                        |
        |                                        PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’
    138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \
        |                                                         ^~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1518 | PyArray_BYTES(const PyArrayObject *arr)
        |               ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c:1390:40: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types]
   1390 |         v[i]=*((float*)PyArray_GETPTR1(arr1,i));
        |                                        ^~~~
        |                                        |
        |                                        PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’
    139 |                                          (i)*PyArray_STRIDES(obj)[0]))
        |                                                              ^~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1530 | PyArray_STRIDES(const PyArrayObject *arr)
        |                 ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c:1397:43: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types]
   1397 |         s[i][0]=*((float*)PyArray_GETPTR1(arrf1,i));
        |                                           ^~~~~
        |                                           |
        |                                           PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’
    138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \
        |                                                         ^~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1518 | PyArray_BYTES(const PyArrayObject *arr)
        |               ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c:1397:43: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types]
   1397 |         s[i][0]=*((float*)PyArray_GETPTR1(arrf1,i));
        |                                           ^~~~~
        |                                           |
        |                                           PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’
    139 |                                          (i)*PyArray_STRIDES(obj)[0]))
        |                                                              ^~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1530 | PyArray_STRIDES(const PyArrayObject *arr)
        |                 ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c:1398:43: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types]
   1398 |         s[i][1]=*((float*)PyArray_GETPTR1(arrf2,i));
        |                                           ^~~~~
        |                                           |
        |                                           PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’
    138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \
        |                                                         ^~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1518 | PyArray_BYTES(const PyArrayObject *arr)
        |               ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c:1398:43: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types]
   1398 |         s[i][1]=*((float*)PyArray_GETPTR1(arrf2,i));
        |                                           ^~~~~
        |                                           |
        |                                           PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’
    139 |                                          (i)*PyArray_STRIDES(obj)[0]))
        |                                                              ^~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1530 | PyArray_STRIDES(const PyArrayObject *arr)
        |                 ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c:1399:43: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types]
   1399 |         s[i][2]=*((float*)PyArray_GETPTR1(arrf3,i));
        |                                           ^~~~~
        |                                           |
        |                                           PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’
    138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \
        |                                                         ^~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1518 | PyArray_BYTES(const PyArrayObject *arr)
        |               ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c:1399:43: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types]
   1399 |         s[i][2]=*((float*)PyArray_GETPTR1(arrf3,i));
        |                                           ^~~~~
        |                                           |
        |                                           PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’
    139 |                                          (i)*PyArray_STRIDES(obj)[0]))
        |                                                              ^~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1530 | PyArray_STRIDES(const PyArrayObject *arr)
        |                 ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c: In function ‘eikonalc_oneshot_rtp’:
  pyekfmm/src/eikonal.c:1481:46: error: ‘NPY_IN_ARRAY’ undeclared (first use in this function)
   1481 |     arr1 = PyArray_FROM_OTF(arg1, NPY_FLOAT, NPY_IN_ARRAY);
        |                                              ^~~~~~~~~~~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:91:28: note: in definition of macro ‘PyArray_FROM_OTF’
     91 |                         (((flags) & NPY_ARRAY_ENSURECOPY) ? \
        |                            ^~~~~
  pyekfmm/src/eikonal.c:1485:32: warning: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types]
   1485 |     npy_intp *sp=PyArray_SHAPE(arr1);
        |                                ^~~~
        |                                |
        |                                PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1585:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1585 | PyArray_SHAPE(const PyArrayObject *arr)
        |               ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c:1507:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
   1507 |     for (i = 0; i < nshot; i++)
        |     ^~~
  pyekfmm/src/eikonal.c:1510:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
   1510 |         s[0][0]=x; /*r*/
        |         ^
  pyekfmm/src/eikonal.c:1523:48: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘npy_intp’ {aka ‘long int’} [-Wformat=]
   1523 |         printf("Dimension mismatch, N_input = %d, N_model = %d \n", *sp, n123);
        |                                               ~^                    ~~~
        |                                                |                    |
        |                                                int                  npy_intp {aka long int}
        |                                               %ld
  pyekfmm/src/eikonal.c:1530:40: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types]
   1530 |         v[i]=*((float*)PyArray_GETPTR1(arr1,i));
        |                                        ^~~~
        |                                        |
        |                                        PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’
    138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \
        |                                                         ^~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1518 | PyArray_BYTES(const PyArrayObject *arr)
        |               ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c:1530:40: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types]
   1530 |         v[i]=*((float*)PyArray_GETPTR1(arr1,i));
        |                                        ^~~~
        |                                        |
        |                                        PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’
    139 |                                          (i)*PyArray_STRIDES(obj)[0]))
        |                                                              ^~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1530 | PyArray_STRIDES(const PyArrayObject *arr)
        |                 ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c: In function ‘eikonalc_multishots_rtp’:
  pyekfmm/src/eikonal.c:1605:46: error: ‘NPY_IN_ARRAY’ undeclared (first use in this function)
   1605 |     arr1 = PyArray_FROM_OTF(arg1, NPY_FLOAT, NPY_IN_ARRAY);
        |                                              ^~~~~~~~~~~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:91:28: note: in definition of macro ‘PyArray_FROM_OTF’
     91 |                         (((flags) & NPY_ARRAY_ENSURECOPY) ? \
        |                            ^~~~~
  pyekfmm/src/eikonal.c:1610:32: warning: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types]
   1610 |     npy_intp *sp=PyArray_SHAPE(arr1);
        |                                ^~~~
        |                                |
        |                                PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1585:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1585 | PyArray_SHAPE(const PyArrayObject *arr)
        |               ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c:1611:35: warning: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types]
   1611 |     npy_intp *spxyz=PyArray_SHAPE(arrf1);
        |                                   ^~~~~
        |                                   |
        |                                   PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1585:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1585 | PyArray_SHAPE(const PyArrayObject *arr)
        |               ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c:1644:48: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘npy_intp’ {aka ‘long int’} [-Wformat=]
   1644 |         printf("Dimension mismatch, N_input = %d, N_model = %d\n", *sp, n123);
        |                                               ~^                   ~~~
        |                                                |                   |
        |                                                int                 npy_intp {aka long int}
        |                                               %ld
  pyekfmm/src/eikonal.c:1651:40: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types]
   1651 |         v[i]=*((float*)PyArray_GETPTR1(arr1,i));
        |                                        ^~~~
        |                                        |
        |                                        PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’
    138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \
        |                                                         ^~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1518 | PyArray_BYTES(const PyArrayObject *arr)
        |               ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c:1651:40: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types]
   1651 |         v[i]=*((float*)PyArray_GETPTR1(arr1,i));
        |                                        ^~~~
        |                                        |
        |                                        PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’
    139 |                                          (i)*PyArray_STRIDES(obj)[0]))
        |                                                              ^~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1530 | PyArray_STRIDES(const PyArrayObject *arr)
        |                 ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c:1658:43: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types]
   1658 |         s[i][0]=*((float*)PyArray_GETPTR1(arrf1,i));
        |                                           ^~~~~
        |                                           |
        |                                           PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’
    138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \
        |                                                         ^~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1518 | PyArray_BYTES(const PyArrayObject *arr)
        |               ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c:1658:43: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types]
   1658 |         s[i][0]=*((float*)PyArray_GETPTR1(arrf1,i));
        |                                           ^~~~~
        |                                           |
        |                                           PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’
    139 |                                          (i)*PyArray_STRIDES(obj)[0]))
        |                                                              ^~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1530 | PyArray_STRIDES(const PyArrayObject *arr)
        |                 ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c:1659:43: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types]
   1659 |         s[i][1]=*((float*)PyArray_GETPTR1(arrf2,i))/180*M_PI;
        |                                           ^~~~~
        |                                           |
        |                                           PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’
    138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \
        |                                                         ^~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1518 | PyArray_BYTES(const PyArrayObject *arr)
        |               ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c:1659:43: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types]
   1659 |         s[i][1]=*((float*)PyArray_GETPTR1(arrf2,i))/180*M_PI;
        |                                           ^~~~~
        |                                           |
        |                                           PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’
    139 |                                          (i)*PyArray_STRIDES(obj)[0]))
        |                                                              ^~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1530 | PyArray_STRIDES(const PyArrayObject *arr)
        |                 ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c:1660:43: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types]
   1660 |         s[i][2]=*((float*)PyArray_GETPTR1(arrf3,i))/180*M_PI;
        |                                           ^~~~~
        |                                           |
        |                                           PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’
    138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \
        |                                                         ^~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1518 | PyArray_BYTES(const PyArrayObject *arr)
        |               ~~~~~~~~~~~~~~~~~~~~~^~~
  pyekfmm/src/eikonal.c:1660:43: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types]
   1660 |         s[i][2]=*((float*)PyArray_GETPTR1(arrf3,i))/180*M_PI;
        |                                           ^~~~~
        |                                           |
        |                                           PyObject * {aka struct _object *}
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’
    139 |                                          (i)*PyArray_STRIDES(obj)[0]))
        |                                                              ^~~
  /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’}
   1530 | PyArray_STRIDES(const PyArrayObject *arr)
        |                 ~~~~~~~~~~~~~~~~~~~~~^~~
  error: command '/usr/bin/gcc' failed with exit code 1
  [end of output]

note: This error originates from a subprocess, and is likely not a problem with pip.
ERROR: Failed building wheel for pyekfmm
Running setup.py clean for pyekfmm
Failed to build pyekfmm
error: failed-wheel-build-for-install

× Failed to build installable wheels for some pyproject.toml based projects
╰─> pyekfmm

[chenyk1990]

Hi, we will fix this issue. Stay tuned! Thx, Yangkang

…

On Fri, Sep 26, 2025 at 9:50 PM 0haolrving ***@***.***> wrote: *0haolrving* left a comment (aaspip/pyekfmm#8) <#8 (comment)> Hi there! I'm having trouble building the pyekfmm package due to an error related to NPY_IN_ARRAY being undeclared. Should I replace it with NPY_ARRAY_IN_ARRAY? Additionally, I'm seeing warnings about pyekfmm.src not being included in the package configuration.I am running this on Linux, and the relevant dependencies have already been updated. Could you provide guidance on how to resolve these issues? Thanks! DEPRECATION: Building 'pyekfmm' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the --use-pep517 option, (possibly combined with --no-build-isolation), or adding a pyproject.toml file to the source tree of 'pyekfmm'. Discussion can be found at pypa/pip#6334 <pypa/pip#6334> Building wheel for pyekfmm (setup.py) ... error error: subprocess-exited-with-error × python setup.py bdist_wheel did not run successfully. │ exit code: 1 ╰─> [703 lines of output] /home/zj/miniconda3/lib/python3.13/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: GNU General Public License v3 (GPLv3) See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running bdist_wheel running build running build_py creating build/lib.linux-x86_64-cpython-313/pyekfmm copying pyekfmm/__init__.py -> build/lib.linux-x86_64-cpython-313/pyekfmm copying pyekfmm/stream.py -> build/lib.linux-x86_64-cpython-313/pyekfmm copying pyekfmm/plot.py -> build/lib.linux-x86_64-cpython-313/pyekfmm copying pyekfmm/fmmvti.py -> build/lib.linux-x86_64-cpython-313/pyekfmm copying pyekfmm/fmm.py -> build/lib.linux-x86_64-cpython-313/pyekfmm running egg_info writing pyekfmm.egg-info/PKG-INFO writing dependency_links to pyekfmm.egg-info/dependency_links.txt writing requirements to pyekfmm.egg-info/requires.txt writing top-level names to pyekfmm.egg-info/top_level.txt reading manifest file 'pyekfmm.egg-info/SOURCES.txt' adding license file 'LICENSE' writing manifest file 'pyekfmm.egg-info/SOURCES.txt' /home/zj/miniconda3/lib/python3.13/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'pyekfmm.src' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'pyekfmm.src' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'pyekfmm.src' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'pyekfmm.src' to be distributed and are already explicitly excluding 'pyekfmm.src' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ************************************************************ ******************** !! check.warn(importable) creating build/lib.linux-x86_64-cpython-313/pyekfmm/src copying pyekfmm/src/eikonal.c -> build/lib.linux-x86_64-cpython-313/pyekfmm/src copying pyekfmm/src/eikonalvti.c -> build/lib.linux-x86_64-cpython-313/pyekfmm/src running build_ext building 'eikonalc' extension creating build/temp.linux-x86_64-cpython-313/pyekfmm/src gcc -pthread -B /home/zj/miniconda3/compiler_compat -fno-strict-overflow -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /home/zj/miniconda3/include -fPIC -O2 -isystem /home/zj/miniconda3/include -fPIC -I/home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include -I/home/zj/miniconda3/include/python3.13 -c pyekfmm/src/eikonal.c -o build/temp.linux-x86_64-cpython-313/pyekfmm/src/eikonal.o In file included from /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/arrayobject.h:5, from pyekfmm/src/eikonal.c:6: pyekfmm/src/eikonal.c: In function ‘eikonalc_oneshot’: pyekfmm/src/eikonal.c:687:46: error: ‘NPY_IN_ARRAY’ undeclared (first use in this function) 687 | arr1 = PyArray_FROM_OTF(arg1, NPY_FLOAT, NPY_IN_ARRAY); | ^~~~~~~~~~~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:91:28: note: in definition of macro ‘PyArray_FROM_OTF’ 91 | (((flags) & NPY_ARRAY_ENSURECOPY) ? \ | ^~~~~ pyekfmm/src/eikonal.c:687:46: note: each undeclared identifier is reported only once for each function it appears in 687 | arr1 = PyArray_FROM_OTF(arg1, NPY_FLOAT, NPY_IN_ARRAY); | ^~~~~~~~~~~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:91:28: note: in definition of macro ‘PyArray_FROM_OTF’ 91 | (((flags) & NPY_ARRAY_ENSURECOPY) ? \ | ^~~~~ pyekfmm/src/eikonal.c:691:32: warning: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types] 691 | npy_intp *sp=PyArray_SHAPE(arr1); | ^~~~ | | | PyObject * {aka struct _object *} In file included from /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:12: /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1585:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1585 | PyArray_SHAPE(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:713:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 713 | for (i = 0; i < nshot; i++) | ^~~ pyekfmm/src/eikonal.c:716:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 716 | s[0][0]=x; | ^ pyekfmm/src/eikonal.c:729:48: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘npy_intp’ {aka ‘long int’} [-Wformat=] 729 | printf("Dimension mismatch, N_input = %d, N_model = %d \n", *sp, n123); | ~^ ~~~ | | | | int npy_intp {aka long int} | %ld pyekfmm/src/eikonal.c:736:40: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types] 736 | v[i]=*((float*)PyArray_GETPTR1(arr1,i)); | ^~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’ 138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \ | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1518 | PyArray_BYTES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:736:40: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types] 736 | v[i]=*((float*)PyArray_GETPTR1(arr1,i)); | ^~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’ 139 | (i)*PyArray_STRIDES(obj)[0])) | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1530 | PyArray_STRIDES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c: In function ‘eikonalc_oneshot_angle’: pyekfmm/src/eikonal.c:809:46: error: ‘NPY_IN_ARRAY’ undeclared (first use in this function) 809 | arr1 = PyArray_FROM_OTF(arg1, NPY_FLOAT, NPY_IN_ARRAY); | ^~~~~~~~~~~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:91:28: note: in definition of macro ‘PyArray_FROM_OTF’ 91 | (((flags) & NPY_ARRAY_ENSURECOPY) ? \ | ^~~~~ pyekfmm/src/eikonal.c:813:32: warning: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types] 813 | npy_intp *sp=PyArray_SHAPE(arr1); | ^~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1585:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1585 | PyArray_SHAPE(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:835:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 835 | for (i = 0; i < nshot; i++) | ^~~ pyekfmm/src/eikonal.c:838:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 838 | s[0][0]=x; | ^ pyekfmm/src/eikonal.c:853:48: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘npy_intp’ {aka ‘long int’} [-Wformat=] 853 | printf("Dimension mismatch, N_input = %d, N_model = %d \n", *sp, n123); | ~^ ~~~ | | | | int npy_intp {aka long int} | %ld pyekfmm/src/eikonal.c:860:40: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types] 860 | v[i]=*((float*)PyArray_GETPTR1(arr1,i)); | ^~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’ 138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \ | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1518 | PyArray_BYTES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:860:40: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types] 860 | v[i]=*((float*)PyArray_GETPTR1(arr1,i)); | ^~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’ 139 | (i)*PyArray_STRIDES(obj)[0])) | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1530 | PyArray_STRIDES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c: In function ‘eikonalc_multishots’: pyekfmm/src/eikonal.c:1041:46: error: ‘NPY_IN_ARRAY’ undeclared (first use in this function) 1041 | arr1 = PyArray_FROM_OTF(arg1, NPY_FLOAT, NPY_IN_ARRAY); | ^~~~~~~~~~~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:91:28: note: in definition of macro ‘PyArray_FROM_OTF’ 91 | (((flags) & NPY_ARRAY_ENSURECOPY) ? \ | ^~~~~ pyekfmm/src/eikonal.c:1046:32: warning: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types] 1046 | npy_intp *sp=PyArray_SHAPE(arr1); | ^~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1585:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1585 | PyArray_SHAPE(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1047:35: warning: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types] 1047 | npy_intp *spxyz=PyArray_SHAPE(arrf1); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1585:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1585 | PyArray_SHAPE(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1080:48: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘npy_intp’ {aka ‘long int’} [-Wformat=] 1080 | printf("Dimension mismatch, N_input = %d, N_model = %d\n", *sp, n123); | ~^ ~~~ | | | | int npy_intp {aka long int} | %ld pyekfmm/src/eikonal.c:1087:40: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types] 1087 | v[i]=*((float*)PyArray_GETPTR1(arr1,i)); | ^~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’ 138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \ | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1518 | PyArray_BYTES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1087:40: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types] 1087 | v[i]=*((float*)PyArray_GETPTR1(arr1,i)); | ^~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’ 139 | (i)*PyArray_STRIDES(obj)[0])) | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1530 | PyArray_STRIDES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1094:43: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types] 1094 | s[i][0]=*((float*)PyArray_GETPTR1(arrf1,i)); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’ 138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \ | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1518 | PyArray_BYTES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1094:43: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types] 1094 | s[i][0]=*((float*)PyArray_GETPTR1(arrf1,i)); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’ 139 | (i)*PyArray_STRIDES(obj)[0])) | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1530 | PyArray_STRIDES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1095:43: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types] 1095 | s[i][1]=*((float*)PyArray_GETPTR1(arrf2,i)); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’ 138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \ | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1518 | PyArray_BYTES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1095:43: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types] 1095 | s[i][1]=*((float*)PyArray_GETPTR1(arrf2,i)); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’ 139 | (i)*PyArray_STRIDES(obj)[0])) | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1530 | PyArray_STRIDES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1096:43: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types] 1096 | s[i][2]=*((float*)PyArray_GETPTR1(arrf3,i)); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’ 138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \ | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1518 | PyArray_BYTES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1096:43: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types] 1096 | s[i][2]=*((float*)PyArray_GETPTR1(arrf3,i)); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’ 139 | (i)*PyArray_STRIDES(obj)[0])) | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1530 | PyArray_STRIDES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c: In function ‘eikonalc_multishots_angle’: pyekfmm/src/eikonal.c:1171:46: error: ‘NPY_IN_ARRAY’ undeclared (first use in this function) 1171 | arr1 = PyArray_FROM_OTF(arg1, NPY_FLOAT, NPY_IN_ARRAY); | ^~~~~~~~~~~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:91:28: note: in definition of macro ‘PyArray_FROM_OTF’ 91 | (((flags) & NPY_ARRAY_ENSURECOPY) ? \ | ^~~~~ pyekfmm/src/eikonal.c:1176:32: warning: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types] 1176 | npy_intp *sp=PyArray_SHAPE(arr1); | ^~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1585:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1585 | PyArray_SHAPE(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1177:35: warning: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types] 1177 | npy_intp *spxyz=PyArray_SHAPE(arrf1); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1585:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1585 | PyArray_SHAPE(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1212:48: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘npy_intp’ {aka ‘long int’} [-Wformat=] 1212 | printf("Dimension mismatch, N_input = %d, N_model = %d\n", *sp, n123); | ~^ ~~~ | | | | int npy_intp {aka long int} | %ld pyekfmm/src/eikonal.c:1219:40: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types] 1219 | v[i]=*((float*)PyArray_GETPTR1(arr1,i)); | ^~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’ 138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \ | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1518 | PyArray_BYTES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1219:40: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types] 1219 | v[i]=*((float*)PyArray_GETPTR1(arr1,i)); | ^~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’ 139 | (i)*PyArray_STRIDES(obj)[0])) | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1530 | PyArray_STRIDES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1226:43: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types] 1226 | s[i][0]=*((float*)PyArray_GETPTR1(arrf1,i)); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’ 138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \ | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1518 | PyArray_BYTES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1226:43: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types] 1226 | s[i][0]=*((float*)PyArray_GETPTR1(arrf1,i)); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’ 139 | (i)*PyArray_STRIDES(obj)[0])) | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1530 | PyArray_STRIDES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1227:43: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types] 1227 | s[i][1]=*((float*)PyArray_GETPTR1(arrf2,i)); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’ 138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \ | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1518 | PyArray_BYTES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1227:43: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types] 1227 | s[i][1]=*((float*)PyArray_GETPTR1(arrf2,i)); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’ 139 | (i)*PyArray_STRIDES(obj)[0])) | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1530 | PyArray_STRIDES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1228:43: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types] 1228 | s[i][2]=*((float*)PyArray_GETPTR1(arrf3,i)); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’ 138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \ | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1518 | PyArray_BYTES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1228:43: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types] 1228 | s[i][2]=*((float*)PyArray_GETPTR1(arrf3,i)); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’ 139 | (i)*PyArray_STRIDES(obj)[0])) | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1530 | PyArray_STRIDES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c: In function ‘eikonalc_surf’: pyekfmm/src/eikonal.c:1346:46: error: ‘NPY_IN_ARRAY’ undeclared (first use in this function) 1346 | arr1 = PyArray_FROM_OTF(arg1, NPY_FLOAT, NPY_IN_ARRAY); | ^~~~~~~~~~~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:91:28: note: in definition of macro ‘PyArray_FROM_OTF’ 91 | (((flags) & NPY_ARRAY_ENSURECOPY) ? \ | ^~~~~ pyekfmm/src/eikonal.c:1351:32: warning: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types] 1351 | npy_intp *sp=PyArray_SHAPE(arr1); | ^~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1585:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1585 | PyArray_SHAPE(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1352:35: warning: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types] 1352 | npy_intp *spxyz=PyArray_SHAPE(arrf1); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1585:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1585 | PyArray_SHAPE(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1383:48: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘npy_intp’ {aka ‘long int’} [-Wformat=] 1383 | printf("Dimension mismatch, N_input = %d, N_model = %d\n", *sp, n123); | ~^ ~~~ | | | | int npy_intp {aka long int} | %ld pyekfmm/src/eikonal.c:1390:40: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types] 1390 | v[i]=*((float*)PyArray_GETPTR1(arr1,i)); | ^~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’ 138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \ | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1518 | PyArray_BYTES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1390:40: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types] 1390 | v[i]=*((float*)PyArray_GETPTR1(arr1,i)); | ^~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’ 139 | (i)*PyArray_STRIDES(obj)[0])) | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1530 | PyArray_STRIDES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1397:43: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types] 1397 | s[i][0]=*((float*)PyArray_GETPTR1(arrf1,i)); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’ 138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \ | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1518 | PyArray_BYTES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1397:43: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types] 1397 | s[i][0]=*((float*)PyArray_GETPTR1(arrf1,i)); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’ 139 | (i)*PyArray_STRIDES(obj)[0])) | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1530 | PyArray_STRIDES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1398:43: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types] 1398 | s[i][1]=*((float*)PyArray_GETPTR1(arrf2,i)); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’ 138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \ | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1518 | PyArray_BYTES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1398:43: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types] 1398 | s[i][1]=*((float*)PyArray_GETPTR1(arrf2,i)); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’ 139 | (i)*PyArray_STRIDES(obj)[0])) | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1530 | PyArray_STRIDES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1399:43: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types] 1399 | s[i][2]=*((float*)PyArray_GETPTR1(arrf3,i)); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’ 138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \ | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1518 | PyArray_BYTES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1399:43: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types] 1399 | s[i][2]=*((float*)PyArray_GETPTR1(arrf3,i)); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’ 139 | (i)*PyArray_STRIDES(obj)[0])) | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1530 | PyArray_STRIDES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c: In function ‘eikonalc_oneshot_rtp’: pyekfmm/src/eikonal.c:1481:46: error: ‘NPY_IN_ARRAY’ undeclared (first use in this function) 1481 | arr1 = PyArray_FROM_OTF(arg1, NPY_FLOAT, NPY_IN_ARRAY); | ^~~~~~~~~~~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:91:28: note: in definition of macro ‘PyArray_FROM_OTF’ 91 | (((flags) & NPY_ARRAY_ENSURECOPY) ? \ | ^~~~~ pyekfmm/src/eikonal.c:1485:32: warning: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types] 1485 | npy_intp *sp=PyArray_SHAPE(arr1); | ^~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1585:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1585 | PyArray_SHAPE(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1507:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 1507 | for (i = 0; i < nshot; i++) | ^~~ pyekfmm/src/eikonal.c:1510:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 1510 | s[0][0]=x; /*r*/ | ^ pyekfmm/src/eikonal.c:1523:48: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘npy_intp’ {aka ‘long int’} [-Wformat=] 1523 | printf("Dimension mismatch, N_input = %d, N_model = %d \n", *sp, n123); | ~^ ~~~ | | | | int npy_intp {aka long int} | %ld pyekfmm/src/eikonal.c:1530:40: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types] 1530 | v[i]=*((float*)PyArray_GETPTR1(arr1,i)); | ^~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’ 138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \ | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1518 | PyArray_BYTES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1530:40: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types] 1530 | v[i]=*((float*)PyArray_GETPTR1(arr1,i)); | ^~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’ 139 | (i)*PyArray_STRIDES(obj)[0])) | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1530 | PyArray_STRIDES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c: In function ‘eikonalc_multishots_rtp’: pyekfmm/src/eikonal.c:1605:46: error: ‘NPY_IN_ARRAY’ undeclared (first use in this function) 1605 | arr1 = PyArray_FROM_OTF(arg1, NPY_FLOAT, NPY_IN_ARRAY); | ^~~~~~~~~~~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:91:28: note: in definition of macro ‘PyArray_FROM_OTF’ 91 | (((flags) & NPY_ARRAY_ENSURECOPY) ? \ | ^~~~~ pyekfmm/src/eikonal.c:1610:32: warning: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types] 1610 | npy_intp *sp=PyArray_SHAPE(arr1); | ^~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1585:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1585 | PyArray_SHAPE(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1611:35: warning: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types] 1611 | npy_intp *spxyz=PyArray_SHAPE(arrf1); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1585:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1585 | PyArray_SHAPE(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1644:48: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘npy_intp’ {aka ‘long int’} [-Wformat=] 1644 | printf("Dimension mismatch, N_input = %d, N_model = %d\n", *sp, n123); | ~^ ~~~ | | | | int npy_intp {aka long int} | %ld pyekfmm/src/eikonal.c:1651:40: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types] 1651 | v[i]=*((float*)PyArray_GETPTR1(arr1,i)); | ^~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’ 138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \ | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1518 | PyArray_BYTES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1651:40: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types] 1651 | v[i]=*((float*)PyArray_GETPTR1(arr1,i)); | ^~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’ 139 | (i)*PyArray_STRIDES(obj)[0])) | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1530 | PyArray_STRIDES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1658:43: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types] 1658 | s[i][0]=*((float*)PyArray_GETPTR1(arrf1,i)); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’ 138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \ | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1518 | PyArray_BYTES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1658:43: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types] 1658 | s[i][0]=*((float*)PyArray_GETPTR1(arrf1,i)); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’ 139 | (i)*PyArray_STRIDES(obj)[0])) | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1530 | PyArray_STRIDES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1659:43: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types] 1659 | s[i][1]=*((float*)PyArray_GETPTR1(arrf2,i))/180*M_PI; | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’ 138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \ | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1518 | PyArray_BYTES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1659:43: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types] 1659 | s[i][1]=*((float*)PyArray_GETPTR1(arrf2,i))/180*M_PI; | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’ 139 | (i)*PyArray_STRIDES(obj)[0])) | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1530 | PyArray_STRIDES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1660:43: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types] 1660 | s[i][2]=*((float*)PyArray_GETPTR1(arrf3,i))/180*M_PI; | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’ 138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \ | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1518 | PyArray_BYTES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1660:43: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types] 1660 | s[i][2]=*((float*)PyArray_GETPTR1(arrf3,i))/180*M_PI; | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’ 139 | (i)*PyArray_STRIDES(obj)[0])) | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1530 | PyArray_STRIDES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ error: command '/usr/bin/gcc' failed with exit code 1 [end of output] note: This error originates from a subprocess, and is likely not a problem with pip. ERROR: Failed building wheel for pyekfmm Running setup.py clean for pyekfmm Failed to build pyekfmm error: failed-wheel-build-for-install × Failed to build installable wheels for some pyproject.toml based projects ╰─> pyekfmm — Reply to this

[chenyk1990]

The installation should now work with the latest NumPy. Please let me know if any new issues arise. Best, YC

…

On Fri, Sep 26, 2025 at 9:50 PM 0haolrving ***@***.***> wrote: *0haolrving* left a comment (aaspip/pyekfmm#8) <#8 (comment)> Hi there! I'm having trouble building the pyekfmm package due to an error related to NPY_IN_ARRAY being undeclared. Should I replace it with NPY_ARRAY_IN_ARRAY? Additionally, I'm seeing warnings about pyekfmm.src not being included in the package configuration.I am running this on Linux, and the relevant dependencies have already been updated. Could you provide guidance on how to resolve these issues? Thanks! DEPRECATION: Building 'pyekfmm' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the --use-pep517 option, (possibly combined with --no-build-isolation), or adding a pyproject.toml file to the source tree of 'pyekfmm'. Discussion can be found at pypa/pip#6334 <pypa/pip#6334> Building wheel for pyekfmm (setup.py) ... error error: subprocess-exited-with-error × python setup.py bdist_wheel did not run successfully. │ exit code: 1 ╰─> [703 lines of output] /home/zj/miniconda3/lib/python3.13/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: GNU General Public License v3 (GPLv3) See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running bdist_wheel running build running build_py creating build/lib.linux-x86_64-cpython-313/pyekfmm copying pyekfmm/__init__.py -> build/lib.linux-x86_64-cpython-313/pyekfmm copying pyekfmm/stream.py -> build/lib.linux-x86_64-cpython-313/pyekfmm copying pyekfmm/plot.py -> build/lib.linux-x86_64-cpython-313/pyekfmm copying pyekfmm/fmmvti.py -> build/lib.linux-x86_64-cpython-313/pyekfmm copying pyekfmm/fmm.py -> build/lib.linux-x86_64-cpython-313/pyekfmm running egg_info writing pyekfmm.egg-info/PKG-INFO writing dependency_links to pyekfmm.egg-info/dependency_links.txt writing requirements to pyekfmm.egg-info/requires.txt writing top-level names to pyekfmm.egg-info/top_level.txt reading manifest file 'pyekfmm.egg-info/SOURCES.txt' adding license file 'LICENSE' writing manifest file 'pyekfmm.egg-info/SOURCES.txt' /home/zj/miniconda3/lib/python3.13/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'pyekfmm.src' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'pyekfmm.src' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'pyekfmm.src' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'pyekfmm.src' to be distributed and are already explicitly excluding 'pyekfmm.src' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) creating build/lib.linux-x86_64-cpython-313/pyekfmm/src copying pyekfmm/src/eikonal.c -> build/lib.linux-x86_64-cpython-313/pyekfmm/src copying pyekfmm/src/eikonalvti.c -> build/lib.linux-x86_64-cpython-313/pyekfmm/src running build_ext building 'eikonalc' extension creating build/temp.linux-x86_64-cpython-313/pyekfmm/src gcc -pthread -B /home/zj/miniconda3/compiler_compat -fno-strict-overflow -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /home/zj/miniconda3/include -fPIC -O2 -isystem /home/zj/miniconda3/include -fPIC -I/home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include -I/home/zj/miniconda3/include/python3.13 -c pyekfmm/src/eikonal.c -o build/temp.linux-x86_64-cpython-313/pyekfmm/src/eikonal.o In file included from /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/arrayobject.h:5, from pyekfmm/src/eikonal.c:6: pyekfmm/src/eikonal.c: In function ‘eikonalc_oneshot’: pyekfmm/src/eikonal.c:687:46: error: ‘NPY_IN_ARRAY’ undeclared (first use in this function) 687 | arr1 = PyArray_FROM_OTF(arg1, NPY_FLOAT, NPY_IN_ARRAY); | ^~~~~~~~~~~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:91:28: note: in definition of macro ‘PyArray_FROM_OTF’ 91 | (((flags) & NPY_ARRAY_ENSURECOPY) ? \ | ^~~~~ pyekfmm/src/eikonal.c:687:46: note: each undeclared identifier is reported only once for each function it appears in 687 | arr1 = PyArray_FROM_OTF(arg1, NPY_FLOAT, NPY_IN_ARRAY); | ^~~~~~~~~~~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:91:28: note: in definition of macro ‘PyArray_FROM_OTF’ 91 | (((flags) & NPY_ARRAY_ENSURECOPY) ? \ | ^~~~~ pyekfmm/src/eikonal.c:691:32: warning: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types] 691 | npy_intp *sp=PyArray_SHAPE(arr1); | ^~~~ | | | PyObject * {aka struct _object *} In file included from /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:12: /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1585:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1585 | PyArray_SHAPE(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:713:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 713 | for (i = 0; i < nshot; i++) | ^~~ pyekfmm/src/eikonal.c:716:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 716 | s[0][0]=x; | ^ pyekfmm/src/eikonal.c:729:48: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘npy_intp’ {aka ‘long int’} [-Wformat=] 729 | printf("Dimension mismatch, N_input = %d, N_model = %d \n", *sp, n123); | ~^ ~~~ | | | | int npy_intp {aka long int} | %ld pyekfmm/src/eikonal.c:736:40: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types] 736 | v[i]=*((float*)PyArray_GETPTR1(arr1,i)); | ^~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’ 138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \ | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1518 | PyArray_BYTES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:736:40: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types] 736 | v[i]=*((float*)PyArray_GETPTR1(arr1,i)); | ^~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’ 139 | (i)*PyArray_STRIDES(obj)[0])) | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1530 | PyArray_STRIDES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c: In function ‘eikonalc_oneshot_angle’: pyekfmm/src/eikonal.c:809:46: error: ‘NPY_IN_ARRAY’ undeclared (first use in this function) 809 | arr1 = PyArray_FROM_OTF(arg1, NPY_FLOAT, NPY_IN_ARRAY); | ^~~~~~~~~~~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:91:28: note: in definition of macro ‘PyArray_FROM_OTF’ 91 | (((flags) & NPY_ARRAY_ENSURECOPY) ? \ | ^~~~~ pyekfmm/src/eikonal.c:813:32: warning: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types] 813 | npy_intp *sp=PyArray_SHAPE(arr1); | ^~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1585:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1585 | PyArray_SHAPE(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:835:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 835 | for (i = 0; i < nshot; i++) | ^~~ pyekfmm/src/eikonal.c:838:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 838 | s[0][0]=x; | ^ pyekfmm/src/eikonal.c:853:48: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘npy_intp’ {aka ‘long int’} [-Wformat=] 853 | printf("Dimension mismatch, N_input = %d, N_model = %d \n", *sp, n123); | ~^ ~~~ | | | | int npy_intp {aka long int} | %ld pyekfmm/src/eikonal.c:860:40: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types] 860 | v[i]=*((float*)PyArray_GETPTR1(arr1,i)); | ^~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’ 138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \ | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1518 | PyArray_BYTES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:860:40: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types] 860 | v[i]=*((float*)PyArray_GETPTR1(arr1,i)); | ^~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’ 139 | (i)*PyArray_STRIDES(obj)[0])) | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1530 | PyArray_STRIDES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c: In function ‘eikonalc_multishots’: pyekfmm/src/eikonal.c:1041:46: error: ‘NPY_IN_ARRAY’ undeclared (first use in this function) 1041 | arr1 = PyArray_FROM_OTF(arg1, NPY_FLOAT, NPY_IN_ARRAY); | ^~~~~~~~~~~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:91:28: note: in definition of macro ‘PyArray_FROM_OTF’ 91 | (((flags) & NPY_ARRAY_ENSURECOPY) ? \ | ^~~~~ pyekfmm/src/eikonal.c:1046:32: warning: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types] 1046 | npy_intp *sp=PyArray_SHAPE(arr1); | ^~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1585:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1585 | PyArray_SHAPE(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1047:35: warning: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types] 1047 | npy_intp *spxyz=PyArray_SHAPE(arrf1); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1585:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1585 | PyArray_SHAPE(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1080:48: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘npy_intp’ {aka ‘long int’} [-Wformat=] 1080 | printf("Dimension mismatch, N_input = %d, N_model = %d\n", *sp, n123); | ~^ ~~~ | | | | int npy_intp {aka long int} | %ld pyekfmm/src/eikonal.c:1087:40: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types] 1087 | v[i]=*((float*)PyArray_GETPTR1(arr1,i)); | ^~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’ 138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \ | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1518 | PyArray_BYTES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1087:40: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types] 1087 | v[i]=*((float*)PyArray_GETPTR1(arr1,i)); | ^~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’ 139 | (i)*PyArray_STRIDES(obj)[0])) | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1530 | PyArray_STRIDES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1094:43: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types] 1094 | s[i][0]=*((float*)PyArray_GETPTR1(arrf1,i)); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’ 138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \ | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1518 | PyArray_BYTES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1094:43: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types] 1094 | s[i][0]=*((float*)PyArray_GETPTR1(arrf1,i)); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’ 139 | (i)*PyArray_STRIDES(obj)[0])) | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1530 | PyArray_STRIDES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1095:43: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types] 1095 | s[i][1]=*((float*)PyArray_GETPTR1(arrf2,i)); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’ 138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \ | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1518 | PyArray_BYTES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1095:43: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types] 1095 | s[i][1]=*((float*)PyArray_GETPTR1(arrf2,i)); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’ 139 | (i)*PyArray_STRIDES(obj)[0])) | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1530 | PyArray_STRIDES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1096:43: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types] 1096 | s[i][2]=*((float*)PyArray_GETPTR1(arrf3,i)); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’ 138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \ | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1518 | PyArray_BYTES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1096:43: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types] 1096 | s[i][2]=*((float*)PyArray_GETPTR1(arrf3,i)); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’ 139 | (i)*PyArray_STRIDES(obj)[0])) | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1530 | PyArray_STRIDES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c: In function ‘eikonalc_multishots_angle’: pyekfmm/src/eikonal.c:1171:46: error: ‘NPY_IN_ARRAY’ undeclared (first use in this function) 1171 | arr1 = PyArray_FROM_OTF(arg1, NPY_FLOAT, NPY_IN_ARRAY); | ^~~~~~~~~~~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:91:28: note: in definition of macro ‘PyArray_FROM_OTF’ 91 | (((flags) & NPY_ARRAY_ENSURECOPY) ? \ | ^~~~~ pyekfmm/src/eikonal.c:1176:32: warning: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types] 1176 | npy_intp *sp=PyArray_SHAPE(arr1); | ^~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1585:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1585 | PyArray_SHAPE(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1177:35: warning: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types] 1177 | npy_intp *spxyz=PyArray_SHAPE(arrf1); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1585:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1585 | PyArray_SHAPE(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1212:48: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘npy_intp’ {aka ‘long int’} [-Wformat=] 1212 | printf("Dimension mismatch, N_input = %d, N_model = %d\n", *sp, n123); | ~^ ~~~ | | | | int npy_intp {aka long int} | %ld pyekfmm/src/eikonal.c:1219:40: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types] 1219 | v[i]=*((float*)PyArray_GETPTR1(arr1,i)); | ^~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’ 138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \ | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1518 | PyArray_BYTES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1219:40: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types] 1219 | v[i]=*((float*)PyArray_GETPTR1(arr1,i)); | ^~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’ 139 | (i)*PyArray_STRIDES(obj)[0])) | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1530 | PyArray_STRIDES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1226:43: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types] 1226 | s[i][0]=*((float*)PyArray_GETPTR1(arrf1,i)); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’ 138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \ | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1518 | PyArray_BYTES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1226:43: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types] 1226 | s[i][0]=*((float*)PyArray_GETPTR1(arrf1,i)); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’ 139 | (i)*PyArray_STRIDES(obj)[0])) | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1530 | PyArray_STRIDES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1227:43: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types] 1227 | s[i][1]=*((float*)PyArray_GETPTR1(arrf2,i)); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’ 138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \ | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1518 | PyArray_BYTES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1227:43: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types] 1227 | s[i][1]=*((float*)PyArray_GETPTR1(arrf2,i)); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’ 139 | (i)*PyArray_STRIDES(obj)[0])) | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1530 | PyArray_STRIDES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1228:43: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types] 1228 | s[i][2]=*((float*)PyArray_GETPTR1(arrf3,i)); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’ 138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \ | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1518 | PyArray_BYTES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1228:43: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types] 1228 | s[i][2]=*((float*)PyArray_GETPTR1(arrf3,i)); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’ 139 | (i)*PyArray_STRIDES(obj)[0])) | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1530 | PyArray_STRIDES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c: In function ‘eikonalc_surf’: pyekfmm/src/eikonal.c:1346:46: error: ‘NPY_IN_ARRAY’ undeclared (first use in this function) 1346 | arr1 = PyArray_FROM_OTF(arg1, NPY_FLOAT, NPY_IN_ARRAY); | ^~~~~~~~~~~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:91:28: note: in definition of macro ‘PyArray_FROM_OTF’ 91 | (((flags) & NPY_ARRAY_ENSURECOPY) ? \ | ^~~~~ pyekfmm/src/eikonal.c:1351:32: warning: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types] 1351 | npy_intp *sp=PyArray_SHAPE(arr1); | ^~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1585:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1585 | PyArray_SHAPE(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1352:35: warning: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types] 1352 | npy_intp *spxyz=PyArray_SHAPE(arrf1); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1585:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1585 | PyArray_SHAPE(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1383:48: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘npy_intp’ {aka ‘long int’} [-Wformat=] 1383 | printf("Dimension mismatch, N_input = %d, N_model = %d\n", *sp, n123); | ~^ ~~~ | | | | int npy_intp {aka long int} | %ld pyekfmm/src/eikonal.c:1390:40: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types] 1390 | v[i]=*((float*)PyArray_GETPTR1(arr1,i)); | ^~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’ 138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \ | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1518 | PyArray_BYTES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1390:40: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types] 1390 | v[i]=*((float*)PyArray_GETPTR1(arr1,i)); | ^~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’ 139 | (i)*PyArray_STRIDES(obj)[0])) | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1530 | PyArray_STRIDES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1397:43: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types] 1397 | s[i][0]=*((float*)PyArray_GETPTR1(arrf1,i)); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’ 138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \ | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1518 | PyArray_BYTES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1397:43: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types] 1397 | s[i][0]=*((float*)PyArray_GETPTR1(arrf1,i)); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’ 139 | (i)*PyArray_STRIDES(obj)[0])) | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1530 | PyArray_STRIDES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1398:43: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types] 1398 | s[i][1]=*((float*)PyArray_GETPTR1(arrf2,i)); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’ 138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \ | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1518 | PyArray_BYTES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1398:43: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types] 1398 | s[i][1]=*((float*)PyArray_GETPTR1(arrf2,i)); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’ 139 | (i)*PyArray_STRIDES(obj)[0])) | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1530 | PyArray_STRIDES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1399:43: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types] 1399 | s[i][2]=*((float*)PyArray_GETPTR1(arrf3,i)); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’ 138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \ | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1518 | PyArray_BYTES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1399:43: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types] 1399 | s[i][2]=*((float*)PyArray_GETPTR1(arrf3,i)); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’ 139 | (i)*PyArray_STRIDES(obj)[0])) | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1530 | PyArray_STRIDES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c: In function ‘eikonalc_oneshot_rtp’: pyekfmm/src/eikonal.c:1481:46: error: ‘NPY_IN_ARRAY’ undeclared (first use in this function) 1481 | arr1 = PyArray_FROM_OTF(arg1, NPY_FLOAT, NPY_IN_ARRAY); | ^~~~~~~~~~~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:91:28: note: in definition of macro ‘PyArray_FROM_OTF’ 91 | (((flags) & NPY_ARRAY_ENSURECOPY) ? \ | ^~~~~ pyekfmm/src/eikonal.c:1485:32: warning: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types] 1485 | npy_intp *sp=PyArray_SHAPE(arr1); | ^~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1585:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1585 | PyArray_SHAPE(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1507:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 1507 | for (i = 0; i < nshot; i++) | ^~~ pyekfmm/src/eikonal.c:1510:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 1510 | s[0][0]=x; /*r*/ | ^ pyekfmm/src/eikonal.c:1523:48: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘npy_intp’ {aka ‘long int’} [-Wformat=] 1523 | printf("Dimension mismatch, N_input = %d, N_model = %d \n", *sp, n123); | ~^ ~~~ | | | | int npy_intp {aka long int} | %ld pyekfmm/src/eikonal.c:1530:40: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types] 1530 | v[i]=*((float*)PyArray_GETPTR1(arr1,i)); | ^~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’ 138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \ | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1518 | PyArray_BYTES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1530:40: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types] 1530 | v[i]=*((float*)PyArray_GETPTR1(arr1,i)); | ^~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’ 139 | (i)*PyArray_STRIDES(obj)[0])) | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1530 | PyArray_STRIDES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c: In function ‘eikonalc_multishots_rtp’: pyekfmm/src/eikonal.c:1605:46: error: ‘NPY_IN_ARRAY’ undeclared (first use in this function) 1605 | arr1 = PyArray_FROM_OTF(arg1, NPY_FLOAT, NPY_IN_ARRAY); | ^~~~~~~~~~~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:91:28: note: in definition of macro ‘PyArray_FROM_OTF’ 91 | (((flags) & NPY_ARRAY_ENSURECOPY) ? \ | ^~~~~ pyekfmm/src/eikonal.c:1610:32: warning: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types] 1610 | npy_intp *sp=PyArray_SHAPE(arr1); | ^~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1585:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1585 | PyArray_SHAPE(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1611:35: warning: passing argument 1 of ‘PyArray_SHAPE’ from incompatible pointer type [-Wincompatible-pointer-types] 1611 | npy_intp *spxyz=PyArray_SHAPE(arrf1); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1585:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1585 | PyArray_SHAPE(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1644:48: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘npy_intp’ {aka ‘long int’} [-Wformat=] 1644 | printf("Dimension mismatch, N_input = %d, N_model = %d\n", *sp, n123); | ~^ ~~~ | | | | int npy_intp {aka long int} | %ld pyekfmm/src/eikonal.c:1651:40: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types] 1651 | v[i]=*((float*)PyArray_GETPTR1(arr1,i)); | ^~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’ 138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \ | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1518 | PyArray_BYTES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1651:40: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types] 1651 | v[i]=*((float*)PyArray_GETPTR1(arr1,i)); | ^~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’ 139 | (i)*PyArray_STRIDES(obj)[0])) | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1530 | PyArray_STRIDES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1658:43: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types] 1658 | s[i][0]=*((float*)PyArray_GETPTR1(arrf1,i)); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’ 138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \ | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1518 | PyArray_BYTES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1658:43: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types] 1658 | s[i][0]=*((float*)PyArray_GETPTR1(arrf1,i)); | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’ 139 | (i)*PyArray_STRIDES(obj)[0])) | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1530 | PyArray_STRIDES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1659:43: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types] 1659 | s[i][1]=*((float*)PyArray_GETPTR1(arrf2,i))/180*M_PI; | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’ 138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \ | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1518 | PyArray_BYTES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1659:43: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types] 1659 | s[i][1]=*((float*)PyArray_GETPTR1(arrf2,i))/180*M_PI; | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’ 139 | (i)*PyArray_STRIDES(obj)[0])) | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1530 | PyArray_STRIDES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1660:43: warning: passing argument 1 of ‘PyArray_BYTES’ from incompatible pointer type [-Wincompatible-pointer-types] 1660 | s[i][2]=*((float*)PyArray_GETPTR1(arrf3,i))/180*M_PI; | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:138:57: note: in definition of macro ‘PyArray_GETPTR1’ 138 | #define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \ | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1518:36: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1518 | PyArray_BYTES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ pyekfmm/src/eikonal.c:1660:43: warning: passing argument 1 of ‘PyArray_STRIDES’ from incompatible pointer type [-Wincompatible-pointer-types] 1660 | s[i][2]=*((float*)PyArray_GETPTR1(arrf3,i))/180*M_PI; | ^~~~~ | | | PyObject * {aka struct _object *} /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarrayobject.h:139:62: note: in definition of macro ‘PyArray_GETPTR1’ 139 | (i)*PyArray_STRIDES(obj)[0])) | ^~~ /home/zj/miniconda3/lib/python3.13/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1530:38: note: expected ‘const PyArrayObject *’ {aka ‘const struct tagPyArrayObject_fields *’} but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 1530 | PyArray_STRIDES(const PyArrayObject *arr) | ~~~~~~~~~~~~~~~~~~~~~^~~ error: command '/usr/bin/gcc' failed with exit code 1 [end of output] note: This error originates from a subprocess, and is likely not a problem with pip. ERROR: Failed building wheel for pyekfmm Running setup.py clean for pyekfmm Failed to build pyekfmm error: failed-wheel-build-for-install × Failed to build installable wheels for some pyproject.toml based proje

[0haolrving]

Subject: Re: Installation fix

Hi YC,

Thanks for the quick fix!

I tested on Windows:

Installing via pip from PyPI still fails on my side.
Installing from the Git repository works, and the code runs fine.
Best,
KJ

[chenyk1990]

Glad it worked! The PyPi version needs to be changed in the near future. Thanks for pointing that out. Anytime you encounter other issues, just let us know. Best, YC

…

On Wed, Oct 1, 2025 at 3:30 AM 0haolrving ***@***.***> wrote: *0haolrving* left a comment (aaspip/pyekfmm#8) <#8 (comment)> Subject: Re: Installation fix Hi YC, Thanks for the quick fix! I tested on Windows: Installing via pip from PyPI still fails on my side. Installing from the Git repository works, and the code runs fine. Best, KJ — Reply to this email directly, view it on GitHub <#8 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ADHCWEQYUVVVTW2GXGRMUVD3VOGIZAVCNFSM6AAAAACHUPD2GKVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMZTGNJVGI4DMNRRGQ> . You are receiving this because you were mentioned.Message ID: ***@***.***>