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train.py
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246 lines (207 loc) · 11.2 KB
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import numpy as np
import torch
import torch.nn as nn
import torch.nn.functional as F
from utils import match_loss
import deeprobust.graph.utils as utils
import numpy as np
from tqdm import tqdm
from models.gcn import GCN
from models.sgc import SGC
from models.parametrized_adj import PGE
from tqdm import tqdm
import torch
import torch.nn.functional as F
import numpy as np
from torch_sparse import SparseTensor
from tools import *
class Trainer:
def __init__(self, data, args, device='cuda:0', **kwargs):
self.data = data
self.args = args
self.device = device
n = int(data.x[data.idx_train].shape[0] * args.reduction_rate)
self.nnodes_syn = n
self.feat_syn = nn.Parameter(torch.FloatTensor(n, data.nfeat).to(device))
self.pge = PGE(nfeat=data.nfeat, nnodes=n, device=device, args=args).to(device)
self.labels_syn = torch.LongTensor(self.generate_labels_syn(data)).to(device)
self.reset_parameters()
self.optimizer_feat = torch.optim.Adam([self.feat_syn], lr=args.lr_feat)
self.optimizer_pge = torch.optim.Adam(self.pge.parameters(), lr=args.lr_adj)
print('adj_syn:', (n,n), 'feat_syn:', self.feat_syn.shape)
def reset_parameters(self):
self.feat_syn.data.copy_(torch.randn(self.feat_syn.size()))
def generate_labels_syn(self, data):
num_classes = len(set(data.labels_train))
n = len(data.labels_train)
target_total_labels = int(n * self.args.reduction_rate)
labels_per_class = target_total_labels // num_classes
remainder = target_total_labels % num_classes
labels_syn = []
self.syn_class_indices = {}
sum_ = 0
for ix, c in enumerate(set(data.labels_train)):
if ix < remainder:
additional = 1
else:
additional = 0
total_labels = labels_per_class + additional
self.syn_class_indices[c] = [len(labels_syn), len(labels_syn) + total_labels]
labels_syn += [c] * total_labels
sum_ += total_labels
self.num_class_dict = {c: labels_per_class + (1 if i < remainder else 0) for i, c in enumerate(set(data.labels_train))}
return labels_syn
def test_with_val(self):
### Data
data, device = self.data, self.device
feat_syn, pge, labels_syn = self.feat_syn.detach(), self.pge, self.labels_syn
adj_syn = pge.inference(feat_syn)
if self.args.lr_adj == 0:
n = len(labels_syn)
adj_syn = torch.zeros((n, n))
### Model
model = GCN(nfeat=feat_syn.shape[1], nhid=self.args.hidden, dropout=0.5,
weight_decay=5e-4, nlayers=2,
nclass=data.nclass, device=device).to(device)
if self.args.name in ['ogbn-arxiv']:
model = GCN(nfeat=feat_syn.shape[1], nhid=self.args.hidden, dropout=0.5,
weight_decay=0e-4, nlayers=2, with_bn=False,
nclass=data.nclass, device=device).to(device)
model.fit_with_val(feat_syn, adj_syn, labels_syn, data, train_iters=600, normalize=True, verbose=False)
model.eval()
### Result
labels_val = torch.LongTensor(data.labels_val).to(self.device)
labels_test = torch.LongTensor(data.labels_test).to(self.device)
# output = model.predict(data.x_test, data.adj_test)
output = model.predict(data.x, data.adj)
acc_val = utils.accuracy(output[data.idx_val], labels_val)
acc_test = utils.accuracy(output[data.idx_test], labels_test)
return acc_val, acc_test
def get_sub_adj_feat(self, features):
data = self.data
idx_selected = []
from collections import Counter;
counter = Counter(self.labels_syn.cpu().numpy())
for c in range(data.nclass):
tmp = data.retrieve_class(c, num=counter[c]) # the index of the class c
tmp = list(tmp)
idx_selected = idx_selected + tmp
idx_selected = np.array(idx_selected).reshape(-1)
features = features[self.data.idx_train][idx_selected]
return features
def manifold_dimension(self, x, k):
adj = neighbor_graph(x, k=k)
lap = laplacian(adj)
dim = torch.trace(x.T @ lap @ x)
return dim
def train(self):
args = self.args
data = self.data
syn_class_indices = self.syn_class_indices
features, adj, labels = data.x, data.adj, data.y
features, adj, labels = utils.to_tensor(features, adj, labels, device=args.device)
feat_syn, pge, labels_syn = self.feat_syn, self.pge, self.labels_syn
feat_sub = self.get_sub_adj_feat(features)
self.feat_syn.data.copy_(feat_sub)
adj = utils.normalize_adj_tensor(adj, sparse=True)
adj = SparseTensor(row=adj._indices()[0], col=adj._indices()[1], value=adj._values(), sparse_sizes=adj.size()).t()
### Train
outer_loop, inner_loop = args.outer, args.inner
data.update_class_dict(transductive=True)
for it in tqdm(range(args.epochs+1)):
### Model
model = SGC(nfeat=data.x.shape[1], nhid=args.hidden,
nclass=data.nclass, dropout=args.dropout,
nlayers=args.nlayers, with_bn=False,
device=self.device).to(self.device)
model.initialize()
model_parameters = list(model.parameters())
optimizer_model = torch.optim.Adam(model_parameters, lr=args.lr_model)
model.train()
for ol in range(outer_loop):
loss, loss_dimension, loss_curvature = 0., 0., 0.
adj_syn = pge(self.feat_syn)
adj_syn_norm = utils.normalize_adj_tensor(adj_syn)
prop_feat = adj_syn_norm @ (adj_syn_norm @ feat_syn)
try:
prop_feat = pca_svd(prop_feat, k=args.prop_dim)
except:
print(torch.isnan(feat_syn).any())
print(torch.isnan(adj_syn).any())
print(torch.isnan(adj_syn_norm).any())
print(torch.isnan(prop_feat).any())
exit()
# Total Volume
volume_list = []
total_volume = calculate_volume(prop_feat)
# Ricci Curvature
if it % 50 == 0:
with torch.no_grad():
node_ricci = compute_ricci_curvature(adj_syn_norm, alpha=0.5)
output_syn = model.forward(feat_syn, adj_syn_norm)
for c in range(data.nclass):
# ==================== Gradient Matching ====================
batch_size, n_id, adjs = data.retrieve_class_sampler(c, adj, transductive=True, args=args)
if args.nlayers == 1: adjs = [adjs]
adjs = [adj.to(self.device) for adj in adjs]
output = model.forward_sampler(features[n_id], adjs)
labels_idx = labels[n_id[:batch_size]]
loss_real = F.nll_loss(output, labels_idx)
gw_real = torch.autograd.grad(loss_real, model_parameters, retain_graph=True)
ind = syn_class_indices[c]
loss_syn = F.nll_loss(output_syn[ind[0]: ind[1]], labels_syn[ind[0]: ind[1]])
gw_syn = torch.autograd.grad(loss_syn, model_parameters, create_graph=True)
coeff = self.num_class_dict[c] / max(self.num_class_dict.values())
loss_match = match_loss(gw_syn, gw_real, args, device=self.device)
# ==================== Intrinsic Dimension Manifold Regularization ====================
if ind[1] - ind[0] >= args.dimension_k + 1:
loss_dimension = total_volume * self.manifold_dimension(prop_feat[ind[0]: ind[1]], k=args.dimension_k)
# ==================== Curvature-Aware Manifold Smoothing ====================
if ind[1] - ind[0] >= args.curvature_k + 1:
node_gaussian_c = torch.abs(compute_gaussian_curvature_batch(prop_feat[ind[0]: ind[1]], k=args.curvature_k))
node_ricci_c = -node_ricci[ind[0]: ind[1]]
node_ricci_c = (node_ricci_c - torch.min(node_ricci_c)) / (torch.max(node_ricci_c) - torch.min(node_ricci_c))
loss_curvature = torch.sum(node_ricci_c * node_gaussian_c)
# ==================== Class-Wise Manifold Decoupling ====================
volume_c = calculate_volume(prop_feat[ind[0]: ind[1]])
volume_list.append(volume_c)
loss += coeff * (loss_match + args.alpha * loss_dimension + args.beta * loss_curvature)
# ==================== Class-Wise Manifold Decoupling ====================
loss_volume = 0.
loss_volume = torch.pow(torch.sum(torch.stack(volume_list), dim=0) - total_volume, 2)
loss += args.gamma * loss_volume
self.optimizer_feat.zero_grad()
self.optimizer_pge.zero_grad()
loss.backward()
if it < 50:
if it % 50 < 40: self.optimizer_feat.step()
else: self.optimizer_pge.step()
else:
if it % 50 < 10: self.optimizer_pge.step()
else: self.optimizer_feat.step()
if ol == outer_loop - 1:
break
feat_syn_inner = feat_syn.detach()
adj_syn_inner = pge.inference(feat_syn_inner)
adj_syn_inner_norm = utils.normalize_adj_tensor(adj_syn_inner)
feat_syn_inner_norm = feat_syn_inner
for _ in range(inner_loop):
optimizer_model.zero_grad()
output_syn_inner = model.forward(feat_syn_inner_norm, adj_syn_inner_norm)
loss_syn_inner = F.nll_loss(output_syn_inner, labels_syn)
loss_syn_inner.backward()
optimizer_model.step()
if (it + 1) % 100 == 0:
acc_val_res = []
acc_test_res = []
if args.name in ['ogbn-arxiv']: runs = 1
else: runs = 3
for i in tqdm(range(runs)):
acc_val, acc_test = self.test_with_val()
acc_val_res.append(acc_val.item())
acc_test_res.append(acc_test.item())
acc_val_res = np.array(acc_val_res)
acc_test_res = np.array(acc_test_res)
# print(f' Val Accuracy Mean {acc_val_res.mean(0).item():.4f}, Std {acc_val_res.std(0).item():.4f}\nTest Accuracy Mean {acc_test_res.mean(0).item():.4f}, Std {acc_test_res.std(0).item():.4f}')
# with open(args.log_file, 'a+') as f:
# f.write(f'Epoch {(it + 1):4d}\nVal Accuracy Mean {acc_val_res.mean(0).item():.4f}, Std {acc_val_res.std(0).item():.4f}\nTest Accuracy Mean {acc_test_res.mean(0).item():.4f}, Std {acc_test_res.std(0).item():.4f}\n')