forked from Vic-GoodLuck/GraphKeeper
-
Notifications
You must be signed in to change notification settings - Fork 0
Expand file tree
/
Copy pathpipeline.py
More file actions
250 lines (227 loc) · 12.2 KB
/
pipeline.py
File metadata and controls
250 lines (227 loc) · 12.2 KB
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
import os
import pickle
import numpy as np
import torch
from Backbones.model_factory import get_model
from Backbones.utils import evaluate, NodeLevelDataset, evaluate_batch, evaluatewp, evaluate_ours
from training.utils import mkdir_if_missing
from dataset.utils import semi_task_manager
import importlib
import copy
import dgl
joint_alias = ['joint', 'Joint', 'joint_replay_all', 'jointtrain']
def get_pipeline(args):
# choose the pipeline for the chosen setting
if args.method in joint_alias:
return pipeline_domain_IL_no_inter_edge_joint
else:
return pipeline_domain_IL_no_inter_edge
def data_prepare_DIL(args):
torch.cuda.set_device(args.gpu)
dataset = NodeLevelDataset(args.dataset,ratio_valid_test=args.ratio_valid_test,args=args)
args.d_data, args.n_cls = dataset.d_data, dataset.n_cls
args.n_tasks = len(args.task_seq)
n_cls_so_far = 0
# check whether the preprocessed data exist and can be loaded
str_int_tsk = 'no_inter_tsk_edge'
for task, task_cls in enumerate(args.task_seq):
n_cls_so_far += len(task_cls)
try:
if args.load_check:
subgraph, ids_per_cls, [train_ids, valid_ids, test_ids] = pickle.load(open(
f'{args.data_path}/{str_int_tsk}/{args.dataset}_{task_cls[0]}_{task_cls[-1]}.pkl', 'rb'))
else:
if f'{args.dataset}_{task_cls[0]}_{task_cls[-1]}.pkl' not in os.listdir(f'{args.data_path}/{str_int_tsk}'):
subgraph, ids_per_cls, [train_ids, valid_ids, test_ids] = pickle.load(open(
f'{args.data_path}/{str_int_tsk}/{args.dataset}_{task_cls[0]}_{task_cls[-1]}.pkl', 'rb'))
except:
# if not exist or cannot be loaded correctly, create new processed data
print(f'preparing data for task {task}')
mkdir_if_missing(f'{args.data_path}/inter_tsk_edge')
mkdir_if_missing(f'{args.data_path}/no_inter_tsk_edge')
if args.inter_task_edges:
cls_retain = []
for clss in args.task_seq[0:task + 1]:
cls_retain.extend(clss)
subgraph, ids_per_cls_all, [train_ids, valid_ids, test_ids] = dataset.get_graph(
tasks_to_retain=cls_retain)
with open(f'{args.data_path}/inter_tsk_edge/{args.dataset}_{task_cls[0]}_{task_cls[-1]}.pkl', 'wb') as f:
pickle.dump([subgraph, ids_per_cls_all, [train_ids, valid_ids, test_ids]], f)
else:
subgraph, ids_per_cls, [train_ids, valid_ids, test_ids] = dataset.get_graph(tasks_to_retain=task_cls)
with open(f'{args.data_path}/no_inter_tsk_edge/{args.dataset}_{task_cls[0]}_{task_cls[-1]}.pkl', 'wb') as f:
pickle.dump([subgraph, ids_per_cls, [train_ids, valid_ids, test_ids]], f)
def pipeline_domain_IL_no_inter_edge(args, valid=False):
data_prepare_DIL(args)
epochs = args.epochs if valid else 0
torch.cuda.set_device(args.gpu)
dataset = NodeLevelDataset(args.dataset,ratio_valid_test=args.ratio_valid_test,args=args)
args.d_data, args.n_cls = dataset.d_data, dataset.n_cls
args.n_tasks = len(args.task_seq)
task_manager = semi_task_manager()
model = get_model(dataset, args).cuda(args.gpu)
life_model = importlib.import_module(f'Baselines.{args.method}_model')
life_model_ins = life_model.NET(model, task_manager, args) if valid else None
acc_matrix = np.zeros([args.n_tasks, args.n_tasks])
meanas = []
prev_model = None
n_cls_so_far = 0
for task, task_cls in enumerate(args.task_seq):
name, ite = args.current_model_save_path
config_name = name.split('/')[-1]
subfolder_c = name.split(config_name)[-2]
save_model_name = f'{config_name}_{ite}_{task_cls[0]}_{task_cls[-1]}'
save_model_path = f'{args.result_path}/{subfolder_c}val_models/{save_model_name}.pkl'
if args.method == 'tpp':
save_proto_name = save_model_name + '_prototypes'
save_proto_path = f'{args.result_path}/{subfolder_c}val_models/{save_proto_name}.pkl'
n_cls_so_far+=len(task_cls)
subgraph, ids_per_cls, [train_ids, valid_ids, test_ids] = pickle.load(
open(f'{args.data_path}/no_inter_tsk_edge/{args.dataset}_{task_cls[0]}_{task_cls[-1]}.pkl', 'rb'))
subgraph = subgraph.to(device='cuda:{}'.format(args.gpu))
features, labels = subgraph.srcdata['feat'], subgraph.dstdata['label'].squeeze()
task_manager.add_task(task, n_cls_so_far)
label_offset1, label_offset2 = task_manager.get_label_offset(task)
for epoch in range(epochs):
if args.method == 'ours':
life_model_ins.observe(args, subgraph, features, labels, task, train_ids, ids_per_cls, dataset, epochs, args.multi_datasets)
break
else:
life_model_ins.observe(args, subgraph, features, labels, task, train_ids, ids_per_cls, dataset)
torch.cuda.empty_cache()
if not valid:
try:
if args.method == "ours":
life_model_ins = pickle.load(open(save_model_path,'rb')).cuda(args.gpu)
else:
model = pickle.load(open(save_model_path,'rb')).cuda(args.gpu)
except:
if args.method == "ours":
life_model_ins.load_state_dict(torch.load(save_model_path.replace('.pkl','.pt')))
else:
model.load_state_dict(torch.load(save_model_path.replace('.pkl','.pt')))
acc_mean = []
for t in range(task+1):
subgraph, ids_per_cls, [train_ids, valid_ids_, test_ids_] = pickle.load(open(
f'{args.data_path}/no_inter_tsk_edge/{args.dataset}_{args.task_seq[t][0]}_{args.task_seq[t][-1]}.pkl', 'rb'))
subgraph = subgraph.to(device='cuda:{}'.format(args.gpu))
test_ids = valid_ids_ if valid else test_ids_
ids_per_cls_test = [list(set(ids).intersection(set(test_ids))) for ids in ids_per_cls]
features, labels = subgraph.srcdata['feat'], subgraph.dstdata['label'].squeeze()
if args.classifier_increase:
if args.method == "ours":
acc = evaluate_ours(args,life_model_ins, subgraph, features, labels, test_ids, label_offset1, label_offset2, cls_balance=args.cls_balance, ids_per_cls=ids_per_cls_test, task_max=task+1)
else:
acc = evaluate(args,model, subgraph, features, labels, test_ids, label_offset1, label_offset2, cls_balance=args.cls_balance, ids_per_cls=ids_per_cls_test)
acc_matrix[task][t] = round(acc*100,2)
acc_mean.append(acc)
accs = acc_mean[:task+1]
meana = round(np.mean(accs)*100,2)
meanas.append(meana)
acc_mean = round(np.mean(acc_mean)*100,2)
if valid:
mkdir_if_missing(f'{args.result_path}/{subfolder_c}/val_models')
try:
with open(save_model_path, 'wb') as f:
if args.method == "ours":
pickle.dump(life_model_ins, f)
else:
pickle.dump(model, f) # save the best model for each hyperparameter composition
except:
if args.method == "ours":
torch.save(life_model_ins.state_dict(), save_model_path.replace('.pkl','.pt'))
else:
torch.save(model.state_dict(), save_model_path.replace('.pkl','.pt'))
if args.method == 'lwf':
prev_model = copy.deepcopy(model).cuda()
# print('AP: ', acc_mean)
backward = []
for t in range(args.n_tasks-1):
b = acc_matrix[args.n_tasks-1][t]-acc_matrix[t][t]
backward.append(round(b, 2))
mean_backward = round(np.mean(backward),2)
# print('AF: ', mean_backward)
print('\n')
return acc_mean, mean_backward, acc_matrix
def pipeline_domain_IL_no_inter_edge_joint(args, valid=False):
args.method = 'joint_replay_all'
epochs = args.epochs if valid else 0
torch.cuda.set_device(args.gpu)
data_prepare_DIL(args)
dataset = NodeLevelDataset(args.dataset,ratio_valid_test=args.ratio_valid_test,args=args)
args.d_data, args.n_cls = dataset.d_data, dataset.n_cls
print(args.task_seq)
args.n_tasks = len(args.task_seq)
task_manager = semi_task_manager()
model = get_model(dataset, args).cuda(args.gpu)
life_model = importlib.import_module(f'Baselines.{args.method}')
life_model_ins = life_model.NET(model, task_manager, args) if valid else None
acc_matrix = np.zeros([args.n_tasks, args.n_tasks])
meanas = []
n_cls_so_far = 0
for task, task_cls in enumerate(args.task_seq):
name, ite = args.current_model_save_path
config_name = name.split('/')[-1]
subfolder_c = name.split(config_name)[-2]
save_model_name = f'{config_name}_{ite}_{task_cls[0]}_{task_cls[-1]}'
save_model_path = f'{args.result_path}/{subfolder_c}val_models/{save_model_name}.pkl'
n_cls_so_far += len(task_cls)
task_manager.add_task(task, n_cls_so_far)
subgraphs, featuress, labelss, train_idss, ids_per_clss = [], [], [], [], []
for t in range(task + 1):
subgraph, ids_per_cls, [train_ids, valid_idx, test_ids] = pickle.load(open(
f'{args.data_path}/no_inter_tsk_edge/{args.dataset}_{args.task_seq[t][0]}_{args.task_seq[t][-1]}.pkl', 'rb'))
subgraph = subgraph.to(device='cuda:{}'.format(args.gpu))
features, labels = subgraph.srcdata['feat'], subgraph.dstdata['label'].squeeze()
subgraphs.append(subgraph)
featuress.append(features)
labelss.append(labels)
train_idss.append(train_ids)
ids_per_clss.append(ids_per_cls)
for epoch in range(epochs):
life_model_ins.observe(args, subgraphs, featuress, labelss, task, train_idss, ids_per_clss, dataset)
label_offset1, label_offset2 = task_manager.get_label_offset(task)
if not valid:
try:
model = pickle.load(open(save_model_path,'rb')).cuda(args.gpu)
except:
model.load_state_dict(torch.load(save_model_path.replace('.pkl','.pt')))
acc_mean = []
for t in range(task + 1):
subgraph, ids_per_cls, [train_ids, valid_ids_, test_ids_] = pickle.load(open(
f'{args.data_path}/no_inter_tsk_edge/{args.dataset}_{args.task_seq[t][0]}_{args.task_seq[t][-1]}.pkl', 'rb'))
subgraph = subgraph.to(device='cuda:{}'.format(args.gpu))
test_ids = valid_ids_ if valid else test_ids_
ids_per_cls_test = [list(set(ids).intersection(set(test_ids))) for ids in ids_per_cls]
features, labels = subgraph.srcdata['feat'], subgraph.dstdata['label'].squeeze()
if args.classifier_increase:
acc = evaluate(args,model, subgraph, features, labels, test_ids, label_offset1, label_offset2,
cls_balance=args.cls_balance, ids_per_cls=ids_per_cls_test)
else:
acc = evaluate(args,model, subgraph, features, labels, test_ids, label_offset1, label_offset2,
cls_balance=args.cls_balance, ids_per_cls=ids_per_cls_test)
acc_matrix[task][t] = round(acc * 100, 2)
acc_mean.append(acc)
print(f"T{t:02d} {acc * 100:.2f}|", end="")
accs = acc_mean[:task + 1]
meana = round(np.mean(accs) * 100, 2)
meanas.append(meana)
acc_mean = round(np.mean(acc_mean) * 100, 2)
print(f"acc_mean: {acc_mean}", end="")
print()
if valid:
mkdir_if_missing(f'{args.result_path}/{subfolder_c}/val_models')
try:
with open(save_model_path, 'wb') as f:
pickle.dump(model, f) # save the best model for each hyperparameter composition
except:
torch.save(model.state_dict(), save_model_path.replace('.pkl','.pt'))
print('AP: ', acc_mean)
backward = []
for t in range(args.n_tasks - 1):
b = acc_matrix[args.n_tasks - 1][t] - acc_matrix[t][t]
backward.append(round(b, 2))
mean_backward = round(np.mean(backward), 2)
print('AF: ', mean_backward)
print('\n')
return acc_mean, mean_backward, acc_matrix