--workdir flag doesn't work anymore

[jnmildner]

Change to -D

[jnmildner]

After a SLURM update the --workdir flag is no longer in use. This flag should be replaced with -D or --chdir=
For example:

#SBATCH -D ./

or

#SBATCH --chdir=./

It appears in:

• scripts/preprocess/sbatch_prep_DARTEL
• scripts/preprocess/sbatch_prep_SPM12W
• scripts/preprocess/sbatch_prep_TOPUP
• scripts/preprocess/sbatch_prep_FSL
• scripts/sub_level/roi/run_rest_FSL
• scripts/sub_level/roi/sbatch_rest_timecourse_FSL
• scripts/sub_level/roi/generate_roimasks
• scripts/sub_level/roi/sbatch_rest_glm_FSL
• scripts/sub_level/roi/sbatch_rest_preglm_FSL
• scripts/sub_level/glm/sbatch_glm_SPM12W
• scripts/utils/cleanup_output
• scripts/group_level/glm/sbatch_rfx_SPM12W