cellscope/CITATION.cff at main · PixelVolt38/cellscope · GitHub

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cff-version: 1.2.0
message: "If you use this software, please cite both the CellScope software and the accompanying MSc thesis (see preferred-citation)."
title: "CellScope: Capturing Cell-Level Metadata in Jupyter Notebooks"
type: software

authors:
  - family-names: "Camacho Hortelano"
    given-names: "Guillermo"
    affiliation: "University of Amsterdam"

repository-code: "https://github.com/PixelVolt38/cellscope"
url: "https://github.com/PixelVolt38/cellscope"

license: "Apache-2.0"
version: "1.0.0"
date-released: "2026-01-29"

keywords:
  - Jupyter
  - JupyterLab
  - research objects
  - RO-Crate
  - provenance
  - metadata
  - reproducibility
  - digital objects
  - static analysis
  - knowledge graph

abstract: >
  CellScope is a JupyterLab-first tool for capturing and packaging cell-level metadata
  about notebook digital objects (cells, symbols, files/artifacts) using a static-first
  capture pipeline with confirm-first enrichment. It exports portable RO-Crates with
  PROV-aligned links and supports offline inspection and optional indexing for discovery.

preferred-citation:
  type: thesis
  title: "CellScope: Capturing Cell-Level Metadata in Jupyter Notebooks"
  authors:
    - family-names: "Camacho Hortelano"
      given-names: "Guillermo"
      affiliation: "University of Amsterdam"
  institution: "University of Amsterdam"
  year: 2026