From a030980495a2c00119b8b2838a28695f8755eff5 Mon Sep 17 00:00:00 2001
From: "penify-dev[bot]" <146478655+penify-dev[bot]@users.noreply.github.com>
Date: Wed, 14 May 2025 02:48:15 +0000
Subject: [PATCH] Add architecture documentation

---
 docs345/docbook/README_8md.xml                |    5 +
 docs345/docbook/annotated.xml                 |    4 +
 docs345/docbook/api__client_8py.xml           |   21 +
 docs345/docbook/auth__commands_8py.xml        |   25 +
 docs345/docbook/base__analyzer_8py.xml        |   21 +
 docs345/docbook/classException.xml            |   25 +
 .../docbook/classException__coll__graph.md5   |    1 +
 .../docbook/classException__coll__graph.svg   |   26 +
 .../classException__inherit__graph.md5        |    1 +
 .../classException__inherit__graph.svg        |   46 +
 ...nify__hook_1_1api__client_1_1APIClient.xml |  206 +++
 ...1api__client_1_1APIClient__coll__graph.md5 |    1 +
 ...1api__client_1_1APIClient__coll__graph.svg |   36 +
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 ...0ada470b897935f9fb372cd0e7e51e3_cgraph.svg |   70 +
 ...hook_1_1base__analyzer_1_1BaseAnalyzer.xml |   99 ++
 ..._analyzer_1_1BaseAnalyzer__coll__graph.md5 |    1 +
 ..._analyzer_1_1BaseAnalyzer__coll__graph.svg |   33 +
 ...alyzer_1_1BaseAnalyzer__inherit__graph.md5 |    1 +
 ...alyzer_1_1BaseAnalyzer__inherit__graph.svg |  127 ++
 ..._1commit__analyzer_1_1CommitDocGenHook.xml |  229 +++
 ...lyzer_1_1CommitDocGenHook__coll__graph.md5 |    1 +
 ...lyzer_1_1CommitDocGenHook__coll__graph.svg |   57 +
 ...er_1_1CommitDocGenHook__inherit__graph.md5 |    1 +
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 ...1file__analyzer_1_1FileAnalyzerGenHook.xml |  129 ++
 ...er_1_1FileAnalyzerGenHook__coll__graph.md5 |    1 +
 ...er_1_1FileAnalyzerGenHook__coll__graph.svg |   56 +
 ...1_1FileAnalyzerGenHook__inherit__graph.md5 |    1 +
 ...1_1FileAnalyzerGenHook__inherit__graph.svg |   56 +
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 ...ab39391dfb7686f2a2d21a702dd3073_cgraph.svg |   40 +
 ...der__analyzer_1_1FolderAnalyzerGenHook.xml |  120 ++
 ..._1_1FolderAnalyzerGenHook__coll__graph.md5 |    1 +
 ..._1_1FolderAnalyzerGenHook__coll__graph.svg |   55 +
 ...1FolderAnalyzerGenHook__inherit__graph.md5 |    1 +
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 ...analyzer_1_1GitDocGenHook__coll__graph.svg |   58 +
 ...lyzer_1_1GitDocGenHook__inherit__graph.md5 |    1 +
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 ...fy__hook_1_1jira__client_1_1JiraClient.xml |  447 ++++++
 ...ira__client_1_1JiraClient__coll__graph.md5 |    1 +
 ...ira__client_1_1JiraClient__coll__graph.svg |   44 +
 ...d0f9ae006313a21576362d26ac5ec8_icgraph.md5 |    1 +
 ...d0f9ae006313a21576362d26ac5ec8_icgraph.svg |  176 +++
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 ...0d2c5a6432aa6f238da0ff65d49a760_cgraph.md5 |    1 +
 ...0d2c5a6432aa6f238da0ff65d49a760_cgraph.svg |  153 ++
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 ...1f374116c64cd5f1492ec7f7e40f9c1_cgraph.svg |   45 +
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 ...b41ce6f13c30b1265d439ddf04bf2cd_cgraph.md5 |    1 +
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 ...41ce6f13c30b1265d439ddf04bf2cd_icgraph.md5 |    1 +
 ...41ce6f13c30b1265d439ddf04bf2cd_icgraph.svg |   41 +
 ...nify__hook_1_1llm__client_1_1LLMClient.xml |  148 ++
 ...1llm__client_1_1LLMClient__coll__graph.md5 |    1 +
 ...1llm__client_1_1LLMClient__coll__graph.svg |   29 +
 ...ad3014dac466ee1d8e00306d0cf2000_cgraph.md5 |    1 +
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 ..._hook_1_1utils_1_1GitRepoNotFoundError.xml |   25 +
 ...s_1_1GitRepoNotFoundError__coll__graph.md5 |    1 +
 ...s_1_1GitRepoNotFoundError__coll__graph.svg |   46 +
 ..._1GitRepoNotFoundError__inherit__graph.md5 |    1 +
 ..._1GitRepoNotFoundError__inherit__graph.svg |   46 +
 ...commit__commands_1_1TestCommitCommands.xml |  342 +++++
 ...nds_1_1TestCommitCommands__coll__graph.md5 |    1 +
 ...nds_1_1TestCommitCommands__coll__graph.svg |   42 +
 ...3c2ff3707124aa48e8eb581106b8691_cgraph.md5 |    1 +
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 ...d04b125e102190a768f65f1948f15bc_cgraph.md5 |    1 +
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 ...13e368262340af98b30fd8ebdac6597_cgraph.md5 |    1 +
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 ...ea0d934ee0f2b914b0b893736e8fe4e_cgraph.md5 |    1 +
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 ...9c09013055ec39ddde86b487aefcf8b_cgraph.md5 |    1 +
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 ...config__commands_1_1TestConfigCommands.xml |  397 +++++
 ...nds_1_1TestConfigCommands__coll__graph.md5 |    1 +
 ...nds_1_1TestConfigCommands__coll__graph.svg |   50 +
 ...e8162082bcdd5652bb37bdb14cf453a_cgraph.md5 |    1 +
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 ...355f7d313bebaa71694387cf2bc5232_cgraph.md5 |    1 +
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 ...c0207be563c3de59a6d16277805114c_cgraph.md5 |    1 +
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 ...d8df8219441b9e9871b903a681400d9_cgraph.md5 |    1 +
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 ..._1_1test__web__config_1_1TestWebConfig.xml |   85 ++
 ...__config_1_1TestWebConfig__coll__graph.md5 |    1 +
 ...__config_1_1TestWebConfig__coll__graph.svg |   30 +
 ...6e600222e426b003850509cb1d3190a_cgraph.md5 |    1 +
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 ...c6440352201d207ea8b4d26f8ccfa35_cgraph.md5 |    1 +
 ...c6440352201d207ea8b4d26f8ccfa35_cgraph.svg |   40 +
 docs345/docbook/commit-commands_8md.xml       |    5 +
 docs345/docbook/commit__analyzer_8py.xml      |   21 +
 docs345/docbook/commit__commands_8py.xml      |   27 +
 docs345/docbook/config-commands_8md.xml       |    5 +
 docs345/docbook/config__command_8py.xml       |   23 +
 docs345/docbook/config__commands_8py.xml      |   50 +
 docs345/docbook/conftest_8py.xml              |   14 +
 docs345/docbook/constants_8py.xml             |   23 +
 docs345/docbook/detailed-usage_8md.xml        |    5 +
 .../dir_063e2d5fe58a131099a7fe4200cca78c.xml  |   31 +
 ...r_063e2d5fe58a131099a7fe4200cca78c_dep.md5 |    1 +
 ...r_063e2d5fe58a131099a7fe4200cca78c_dep.svg |   30 +
 .../dir_1648a057408aae8db85b8e3797335623.xml  |   14 +
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 ...r_1648a057408aae8db85b8e3797335623_dep.svg |   30 +
 .../dir_624fa2a8bce97f0444ac5cca335d4e23.xml  |   31 +
 ...r_624fa2a8bce97f0444ac5cca335d4e23_dep.md5 |    1 +
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 .../dir_b3b22d2ab7966b65f6b237e3231b41be.xml  |   23 +
 .../dir_f88c3381c1861b3f7ca1f3d63cf244b5.xml  |   56 +
 ...r_f88c3381c1861b3f7ca1f3d63cf244b5_dep.md5 |    1 +
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 docs345/docbook/doc__commands_8md.xml         |    5 +
 docs345/docbook/doc__commands_8py.xml         |   34 +
 docs345/docbook/example-workflows_8md.xml     |    5 +
 docs345/docbook/file__analyzer_8py.xml        |   28 +
 docs345/docbook/folder__analyzer_8py.xml      |   21 +
 docs345/docbook/git__analyzer_8py.xml         |   28 +
 docs345/docbook/hook__commands_8py.xml        |   34 +
 docs345/docbook/index.xml                     |  116 ++
 docs345/docbook/jira__client_8py.xml          |   28 +
 docs345/docbook/llm__client_8py.xml           |   21 +
 docs345/docbook/login__command_8py.xml        |   23 +
 docs345/docbook/main_8py.xml                  |   21 +
 ...enContext_Penify_dev_penify_cli_README.xml |  200 +++
 ...fy_dev_penify_cli_docs_commit_commands.xml |  215 +++
 ...fy_dev_penify_cli_docs_config_commands.xml |  273 ++++
 ...ify_dev_penify_cli_docs_detailed_usage.xml |  261 ++++
 ...enify_dev_penify_cli_docs_doc_commands.xml |  402 +++++
 ..._dev_penify_cli_docs_example_workflows.xml |  209 +++
 docs345/docbook/namespacepenify__hook.xml     |   40 +
 .../namespacepenify__hook_1_1api__client.xml  |   12 +
 ...amespacepenify__hook_1_1base__analyzer.xml |   12 +
 .../namespacepenify__hook_1_1commands.xml     |   20 +
 ...fy__hook_1_1commands_1_1auth__commands.xml |   90 ++
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 ...__hook_1_1commands_1_1commit__commands.xml |  133 ++
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 ...15198ea5d6808ccb98733957f50b06_icgraph.md5 |    1 +
 ...15198ea5d6808ccb98733957f50b06_icgraph.svg |   77 +
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 .../namespacepenify__hook_1_1jira__client.xml |   27 +
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 docs345/docbook/namespacetests.xml            |   20 +
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 docs345/docbook/setup_8py.xml                 |   43 +
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 docs345/docbook/utils_8py.xml                 |   39 +
 docs345/xml/Doxyfile.xml                      |  391 +++++
 docs345/xml/README_8md.xml                    |  179 +++
 docs345/xml/api__client_8py.xml               |  183 +++
 docs345/xml/auth__commands_8py.xml            |  196 +++
 docs345/xml/base__analyzer_8py.xml            |   36 +
 docs345/xml/classException.xml                |   32 +
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 ..._1commit__analyzer_1_1CommitDocGenHook.xml |  288 ++++
 ...1file__analyzer_1_1FileAnalyzerGenHook.xml |  184 +++
 ...der__analyzer_1_1FolderAnalyzerGenHook.xml |  158 ++
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 ...nify__hook_1_1llm__client_1_1LLMClient.xml |  190 +++
 ..._hook_1_1utils_1_1GitRepoNotFoundError.xml |   38 +
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 ..._1_1test__web__config_1_1TestWebConfig.xml |  112 ++
 docs345/xml/combine.xslt                      |   15 +
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 docs345/xml/commit__analyzer_8py.xml          |  198 +++
 docs345/xml/commit__commands_8py.xml          |  184 +++
 docs345/xml/compound.xsd                      | 1290 +++++++++++++++++
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 docs345/xml/config__command_8py.xml           |  112 ++
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 docs345/xml/conftest_8py.xml                  |   23 +
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 docs345/xml/doc__commands_8md.xml             |  340 +++++
 docs345/xml/doc__commands_8py.xml             |  173 +++
 docs345/xml/doxyfile.xsd                      |   45 +
 docs345/xml/example-workflows_8md.xml         |  156 ++
 docs345/xml/file__analyzer_8py.xml            |  159 ++
 docs345/xml/folder__analyzer_8py.xml          |   82 ++
 docs345/xml/git__analyzer_8py.xml             |  212 +++
 docs345/xml/hook__commands_8py.xml            |   69 +
 docs345/xml/index.xml                         |  351 +++++
 docs345/xml/index.xsd                         |   71 +
 docs345/xml/jira__client_8py.xml              |  472 ++++++
 docs345/xml/llm__client_8py.xml               |  192 +++
 docs345/xml/login__command_8py.xml            |   40 +
 docs345/xml/main_8py.xml                      |  104 ++
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 ...ify_dev_penify_cli_docs_detailed_usage.xml |  197 +++
 ...enify_dev_penify_cli_docs_doc_commands.xml |  317 ++++
 ..._dev_penify_cli_docs_example_workflows.xml |  161 ++
 docs345/xml/namespacepenify__hook.xml         |   26 +
 .../namespacepenify__hook_1_1api__client.xml  |   12 +
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 .../xml/namespacepenify__hook_1_1commands.xml |   16 +
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 ...espacepenify__hook_1_1folder__analyzer.xml |   12 +
 ...namespacepenify__hook_1_1git__analyzer.xml |   29 +
 .../namespacepenify__hook_1_1jira__client.xml |   29 +
 .../namespacepenify__hook_1_1llm__client.xml  |   12 +
 ...amespacepenify__hook_1_1login__command.xml |   65 +
 docs345/xml/namespacepenify__hook_1_1main.xml |   50 +
 .../namespacepenify__hook_1_1ui__utils.xml    |  667 +++++++++
 .../xml/namespacepenify__hook_1_1utils.xml    |   96 ++
 docs345/xml/namespacesetup.xml                |  195 +++
 docs345/xml/namespacestd.xml                  |  110 ++
 docs345/xml/namespacetests.xml                |   16 +
 docs345/xml/namespacetests_1_1conftest.xml    |   11 +
 ...mespacetests_1_1test__commit__commands.xml |   12 +
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 .../namespacetests_1_1test__doc__commands.xml |  461 ++++++
 .../namespacetests_1_1test__web__config.xml   |   12 +
 docs345/xml/penify-cli-documentation_8md.xml  |  220 +++
 .../xml/penify__hook_2____init_____8py.xml    |   13 +
 ...nify__hook_2commands_2____init_____8py.xml |   16 +
 docs345/xml/setup_8py.xml                     |   46 +
 docs345/xml/test__commit__commands_8py.xml    |  450 ++++++
 docs345/xml/test__config__commands_8py.xml    |  465 ++++++
 docs345/xml/test__doc__commands_8py.xml       |  372 +++++
 docs345/xml/test__web__config_8py.xml         |  110 ++
 docs345/xml/tests_2____init_____8py.xml       |   15 +
 docs345/xml/ui__utils_8py.xml                 |  263 ++++
 docs345/xml/utils_8py.xml                     |   99 ++
 docs345/xml/xml.xsd                           |   23 +
 506 files changed, 39286 insertions(+)
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 create mode 100644 docs345/docbook/namespacetests_1_1test__doc__commands_a4bb75610e40d94d42bc169b25403c186_cgraph.svg
 create mode 100644 docs345/docbook/namespacetests_1_1test__doc__commands_a64165ddfdb3071a88422f080f0e529a3_cgraph.md5
 create mode 100644 docs345/docbook/namespacetests_1_1test__doc__commands_a64165ddfdb3071a88422f080f0e529a3_cgraph.svg
 create mode 100644 docs345/docbook/namespacetests_1_1test__doc__commands_a806110833eb0aad547156faf014b31d8_cgraph.md5
 create mode 100644 docs345/docbook/namespacetests_1_1test__doc__commands_a806110833eb0aad547156faf014b31d8_cgraph.svg
 create mode 100644 docs345/docbook/namespacetests_1_1test__doc__commands_ab158ffa48469b6c097a7a55fcb20c21a_cgraph.md5
 create mode 100644 docs345/docbook/namespacetests_1_1test__doc__commands_ab158ffa48469b6c097a7a55fcb20c21a_cgraph.svg
 create mode 100644 docs345/docbook/namespacetests_1_1test__doc__commands_ab74688baa8c9b5ba302c2877a9789d05_cgraph.md5
 create mode 100644 docs345/docbook/namespacetests_1_1test__doc__commands_ab74688baa8c9b5ba302c2877a9789d05_cgraph.svg
 create mode 100644 docs345/docbook/namespacetests_1_1test__doc__commands_aec76cc25c23476794234cdadbcaef0c0_cgraph.md5
 create mode 100644 docs345/docbook/namespacetests_1_1test__doc__commands_aec76cc25c23476794234cdadbcaef0c0_cgraph.svg
 create mode 100644 docs345/docbook/namespacetests_1_1test__doc__commands_af9b01e5fc89255cac96747fa081c442c_cgraph.md5
 create mode 100644 docs345/docbook/namespacetests_1_1test__doc__commands_af9b01e5fc89255cac96747fa081c442c_cgraph.svg
 create mode 100644 docs345/docbook/namespacetests_1_1test__web__config.xml
 create mode 100644 docs345/docbook/penify-cli-documentation_8md.xml
 create mode 100644 docs345/docbook/penify__hook_2____init_____8py.xml
 create mode 100644 docs345/docbook/penify__hook_2commands_2____init_____8py.xml
 create mode 100644 docs345/docbook/setup_8py.xml
 create mode 100644 docs345/docbook/test__commit__commands_8py.xml
 create mode 100644 docs345/docbook/test__config__commands_8py.xml
 create mode 100644 docs345/docbook/test__doc__commands_8py.xml
 create mode 100644 docs345/docbook/test__web__config_8py.xml
 create mode 100644 docs345/docbook/tests_2____init_____8py.xml
 create mode 100644 docs345/docbook/ui__utils_8py.xml
 create mode 100644 docs345/docbook/utils_8py.xml
 create mode 100644 docs345/xml/Doxyfile.xml
 create mode 100644 docs345/xml/README_8md.xml
 create mode 100644 docs345/xml/api__client_8py.xml
 create mode 100644 docs345/xml/auth__commands_8py.xml
 create mode 100644 docs345/xml/base__analyzer_8py.xml
 create mode 100644 docs345/xml/classException.xml
 create mode 100644 docs345/xml/classpenify__hook_1_1api__client_1_1APIClient.xml
 create mode 100644 docs345/xml/classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.xml
 create mode 100644 docs345/xml/classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook.xml
 create mode 100644 docs345/xml/classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook.xml
 create mode 100644 docs345/xml/classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook.xml
 create mode 100644 docs345/xml/classpenify__hook_1_1git__analyzer_1_1GitDocGenHook.xml
 create mode 100644 docs345/xml/classpenify__hook_1_1jira__client_1_1JiraClient.xml
 create mode 100644 docs345/xml/classpenify__hook_1_1llm__client_1_1LLMClient.xml
 create mode 100644 docs345/xml/classpenify__hook_1_1utils_1_1GitRepoNotFoundError.xml
 create mode 100644 docs345/xml/classtests_1_1test__commit__commands_1_1TestCommitCommands.xml
 create mode 100644 docs345/xml/classtests_1_1test__config__commands_1_1TestConfigCommands.xml
 create mode 100644 docs345/xml/classtests_1_1test__web__config_1_1TestWebConfig.xml
 create mode 100644 docs345/xml/combine.xslt
 create mode 100644 docs345/xml/commit-commands_8md.xml
 create mode 100644 docs345/xml/commit__analyzer_8py.xml
 create mode 100644 docs345/xml/commit__commands_8py.xml
 create mode 100644 docs345/xml/compound.xsd
 create mode 100644 docs345/xml/config-commands_8md.xml
 create mode 100644 docs345/xml/config__command_8py.xml
 create mode 100644 docs345/xml/config__commands_8py.xml
 create mode 100644 docs345/xml/conftest_8py.xml
 create mode 100644 docs345/xml/constants_8py.xml
 create mode 100644 docs345/xml/detailed-usage_8md.xml
 create mode 100644 docs345/xml/dir_063e2d5fe58a131099a7fe4200cca78c.xml
 create mode 100644 docs345/xml/dir_1648a057408aae8db85b8e3797335623.xml
 create mode 100644 docs345/xml/dir_624fa2a8bce97f0444ac5cca335d4e23.xml
 create mode 100644 docs345/xml/dir_b3b22d2ab7966b65f6b237e3231b41be.xml
 create mode 100644 docs345/xml/dir_f88c3381c1861b3f7ca1f3d63cf244b5.xml
 create mode 100644 docs345/xml/doc__commands_8md.xml
 create mode 100644 docs345/xml/doc__commands_8py.xml
 create mode 100644 docs345/xml/doxyfile.xsd
 create mode 100644 docs345/xml/example-workflows_8md.xml
 create mode 100644 docs345/xml/file__analyzer_8py.xml
 create mode 100644 docs345/xml/folder__analyzer_8py.xml
 create mode 100644 docs345/xml/git__analyzer_8py.xml
 create mode 100644 docs345/xml/hook__commands_8py.xml
 create mode 100644 docs345/xml/index.xml
 create mode 100644 docs345/xml/index.xsd
 create mode 100644 docs345/xml/jira__client_8py.xml
 create mode 100644 docs345/xml/llm__client_8py.xml
 create mode 100644 docs345/xml/login__command_8py.xml
 create mode 100644 docs345/xml/main_8py.xml
 create mode 100644 docs345/xml/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README.xml
 create mode 100644 docs345/xml/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands.xml
 create mode 100644 docs345/xml/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands.xml
 create mode 100644 docs345/xml/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage.xml
 create mode 100644 docs345/xml/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.xml
 create mode 100644 docs345/xml/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows.xml
 create mode 100644 docs345/xml/namespacepenify__hook.xml
 create mode 100644 docs345/xml/namespacepenify__hook_1_1api__client.xml
 create mode 100644 docs345/xml/namespacepenify__hook_1_1base__analyzer.xml
 create mode 100644 docs345/xml/namespacepenify__hook_1_1commands.xml
 create mode 100644 docs345/xml/namespacepenify__hook_1_1commands_1_1auth__commands.xml
 create mode 100644 docs345/xml/namespacepenify__hook_1_1commands_1_1commit__commands.xml
 create mode 100644 docs345/xml/namespacepenify__hook_1_1commands_1_1config__commands.xml
 create mode 100644 docs345/xml/namespacepenify__hook_1_1commands_1_1doc__commands.xml
 create mode 100644 docs345/xml/namespacepenify__hook_1_1commands_1_1hook__commands.xml
 create mode 100644 docs345/xml/namespacepenify__hook_1_1commit__analyzer.xml
 create mode 100644 docs345/xml/namespacepenify__hook_1_1config__command.xml
 create mode 100644 docs345/xml/namespacepenify__hook_1_1constants.xml
 create mode 100644 docs345/xml/namespacepenify__hook_1_1file__analyzer.xml
 create mode 100644 docs345/xml/namespacepenify__hook_1_1folder__analyzer.xml
 create mode 100644 docs345/xml/namespacepenify__hook_1_1git__analyzer.xml
 create mode 100644 docs345/xml/namespacepenify__hook_1_1jira__client.xml
 create mode 100644 docs345/xml/namespacepenify__hook_1_1llm__client.xml
 create mode 100644 docs345/xml/namespacepenify__hook_1_1login__command.xml
 create mode 100644 docs345/xml/namespacepenify__hook_1_1main.xml
 create mode 100644 docs345/xml/namespacepenify__hook_1_1ui__utils.xml
 create mode 100644 docs345/xml/namespacepenify__hook_1_1utils.xml
 create mode 100644 docs345/xml/namespacesetup.xml
 create mode 100644 docs345/xml/namespacestd.xml
 create mode 100644 docs345/xml/namespacetests.xml
 create mode 100644 docs345/xml/namespacetests_1_1conftest.xml
 create mode 100644 docs345/xml/namespacetests_1_1test__commit__commands.xml
 create mode 100644 docs345/xml/namespacetests_1_1test__config__commands.xml
 create mode 100644 docs345/xml/namespacetests_1_1test__doc__commands.xml
 create mode 100644 docs345/xml/namespacetests_1_1test__web__config.xml
 create mode 100644 docs345/xml/penify-cli-documentation_8md.xml
 create mode 100644 docs345/xml/penify__hook_2____init_____8py.xml
 create mode 100644 docs345/xml/penify__hook_2commands_2____init_____8py.xml
 create mode 100644 docs345/xml/setup_8py.xml
 create mode 100644 docs345/xml/test__commit__commands_8py.xml
 create mode 100644 docs345/xml/test__config__commands_8py.xml
 create mode 100644 docs345/xml/test__doc__commands_8py.xml
 create mode 100644 docs345/xml/test__web__config_8py.xml
 create mode 100644 docs345/xml/tests_2____init_____8py.xml
 create mode 100644 docs345/xml/ui__utils_8py.xml
 create mode 100644 docs345/xml/utils_8py.xml
 create mode 100644 docs345/xml/xml.xsd

diff --git a/docs345/docbook/README_8md.xml b/docs345/docbook/README_8md.xml
new file mode 100644
index 0000000..bb4fe43
--- /dev/null
+++ b/docs345/docbook/README_8md.xml
@@ -0,0 +1,5 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_README_8md" xml:lang="en-US">
+<title>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/README.md File Reference</title>
+<indexterm><primary>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/README.md</primary></indexterm>
+</section>
diff --git a/docs345/docbook/annotated.xml b/docs345/docbook/annotated.xml
new file mode 100644
index 0000000..4e3ba8d
--- /dev/null
+++ b/docs345/docbook/annotated.xml
@@ -0,0 +1,4 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_annotated" xml:lang="en-US">
+<title>Class List</title>
+Here are the classes, structs, unions and interfaces with brief descriptions:<link linkend="_classpenify__hook_1_1api__client_1_1APIClient">penify_hook.api_client.APIClient</link><link linkend="_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer">penify_hook.base_analyzer.BaseAnalyzer</link><link linkend="_classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook">penify_hook.commit_analyzer.CommitDocGenHook</link><link linkend="_classException">Exception</link><link linkend="_classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook">penify_hook.file_analyzer.FileAnalyzerGenHook</link><link linkend="_classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook">penify_hook.folder_analyzer.FolderAnalyzerGenHook</link><link linkend="_classpenify__hook_1_1git__analyzer_1_1GitDocGenHook">penify_hook.git_analyzer.GitDocGenHook</link><link linkend="_classpenify__hook_1_1utils_1_1GitRepoNotFoundError">penify_hook.utils.GitRepoNotFoundError</link><link linkend="_classpenify__hook_1_1jira__client_1_1JiraClient">penify_hook.jira_client.JiraClient</link><link linkend="_classpenify__hook_1_1llm__client_1_1LLMClient">penify_hook.llm_client.LLMClient</link><link linkend="_classtests_1_1test__commit__commands_1_1TestCommitCommands">tests.test_commit_commands.TestCommitCommands</link><link linkend="_classtests_1_1test__config__commands_1_1TestConfigCommands">tests.test_config_commands.TestConfigCommands</link><link linkend="_classtests_1_1test__web__config_1_1TestWebConfig">tests.test_web_config.TestWebConfig</link></section>
diff --git a/docs345/docbook/api__client_8py.xml b/docs345/docbook/api__client_8py.xml
new file mode 100644
index 0000000..53ad284
--- /dev/null
+++ b/docs345/docbook/api__client_8py.xml
@@ -0,0 +1,21 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_api__client_8py" xml:lang="en-US">
+<title>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py File Reference</title>
+<indexterm><primary>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py</primary></indexterm>
+<simplesect>
+    <title>Classes    </title>
+        <itemizedlist>
+            <listitem><para>class <link linkend="_classpenify__hook_1_1api__client_1_1APIClient">penify_hook.api_client.APIClient</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Namespaces    </title>
+        <itemizedlist>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook">penify_hook</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook_1_1api__client">penify_hook.api_client</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+</section>
diff --git a/docs345/docbook/auth__commands_8py.xml b/docs345/docbook/auth__commands_8py.xml
new file mode 100644
index 0000000..61590bb
--- /dev/null
+++ b/docs345/docbook/auth__commands_8py.xml
@@ -0,0 +1,25 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_auth__commands_8py" xml:lang="en-US">
+<title>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/auth_commands.py File Reference</title>
+<indexterm><primary>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/auth_commands.py</primary></indexterm>
+<simplesect>
+    <title>Namespaces    </title>
+        <itemizedlist>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook">penify_hook</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook_1_1commands">penify_hook.commands</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook_1_1commands_1_1auth__commands">penify_hook.commands.auth_commands</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Functions    </title>
+        <itemizedlist>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1commands_1_1auth__commands_1aa3956ca1749d4218ea1dc6e5b6218b24">penify_hook.commands.auth_commands.save_credentials</link> (api_key)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1commands_1_1auth__commands_1a78f375c58bb6f69f98675e6a9ac84655">penify_hook.commands.auth_commands.login</link> (api_url, dashboard_url)</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+</section>
diff --git a/docs345/docbook/base__analyzer_8py.xml b/docs345/docbook/base__analyzer_8py.xml
new file mode 100644
index 0000000..0edf9d0
--- /dev/null
+++ b/docs345/docbook/base__analyzer_8py.xml
@@ -0,0 +1,21 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_base__analyzer_8py" xml:lang="en-US">
+<title>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/base_analyzer.py File Reference</title>
+<indexterm><primary>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/base_analyzer.py</primary></indexterm>
+<simplesect>
+    <title>Classes    </title>
+        <itemizedlist>
+            <listitem><para>class <link linkend="_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer">penify_hook.base_analyzer.BaseAnalyzer</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Namespaces    </title>
+        <itemizedlist>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook">penify_hook</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook_1_1base__analyzer">penify_hook.base_analyzer</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+</section>
diff --git a/docs345/docbook/classException.xml b/docs345/docbook/classException.xml
new file mode 100644
index 0000000..36d3b3f
--- /dev/null
+++ b/docs345/docbook/classException.xml
@@ -0,0 +1,25 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_classException" xml:lang="en-US">
+<title>Exception Class Reference</title>
+<indexterm><primary>Exception</primary></indexterm>
+Inheritance diagram for Exception:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classException__inherit__graph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+Collaboration diagram for Exception:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classException__coll__graph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+<para>
+The documentation for this class was generated from the following file:</para>
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/<link linkend="_utils_8py">utils.py</link></section>
diff --git a/docs345/docbook/classException__coll__graph.md5 b/docs345/docbook/classException__coll__graph.md5
new file mode 100644
index 0000000..38ed226
--- /dev/null
+++ b/docs345/docbook/classException__coll__graph.md5
@@ -0,0 +1 @@
+8bfc7cbaf3c53c3b1288446104b2c7ee
\ No newline at end of file
diff --git a/docs345/docbook/classException__coll__graph.svg b/docs345/docbook/classException__coll__graph.svg
new file mode 100644
index 0000000..d2d4076
--- /dev/null
+++ b/docs345/docbook/classException__coll__graph.svg
@@ -0,0 +1,26 @@
+<?xml version="1.0" encoding="UTF-8" standalone="no"?>
+<!DOCTYPE svg PUBLIC "-//W3C//DTD SVG 1.1//EN"
+ "http://www.w3.org/Graphics/SVG/1.1/DTD/svg11.dtd">
+<!-- Generated by graphviz version 2.43.0 (0)
+ -->
+<!-- Title: Exception Pages: 1 -->
+<svg width="73pt" height="66pt"
+ viewBox="0.00 0.00 73.00 66.00" xmlns="http://www.w3.org/2000/svg" xmlns:xlink="http://www.w3.org/1999/xlink">
+<g id="graph0" class="graph" transform="scale(1 1) rotate(0) translate(4 62)">
+<title>Exception</title>
+<polygon fill="white" stroke="transparent" points="-4,4 -4,-62 69,-62 69,4 -4,4"/>
+<!-- Node1 -->
+<g id="node1" class="node">
+<title>Node1</title>
+<g id="a_node1"><a xlink:title=" ">
+<polygon fill="#bfbfbf" stroke="black" points="0,-0.5 0,-57.5 65,-57.5 65,-0.5 0,-0.5"/>
+<text text-anchor="middle" x="32.5" y="-45.5" font-family="Helvetica,sans-Serif" font-size="10.00">Exception</text>
+<polyline fill="none" stroke="black" points="0,-38.5 65,-38.5 "/>
+<text text-anchor="middle" x="32.5" y="-26.5" font-family="Helvetica,sans-Serif" font-size="10.00"> </text>
+<polyline fill="none" stroke="black" points="0,-19.5 65,-19.5 "/>
+<text text-anchor="middle" x="32.5" y="-7.5" font-family="Helvetica,sans-Serif" font-size="10.00"> </text>
+</a>
+</g>
+</g>
+</g>
+</svg>
diff --git a/docs345/docbook/classException__inherit__graph.md5 b/docs345/docbook/classException__inherit__graph.md5
new file mode 100644
index 0000000..f7c5b12
--- /dev/null
+++ b/docs345/docbook/classException__inherit__graph.md5
@@ -0,0 +1 @@
+02df0cdd064aa2dca59b7424cdd2be62
\ No newline at end of file
diff --git a/docs345/docbook/classException__inherit__graph.svg b/docs345/docbook/classException__inherit__graph.svg
new file mode 100644
index 0000000..c8fc6d6
--- /dev/null
+++ b/docs345/docbook/classException__inherit__graph.svg
@@ -0,0 +1,46 @@
+<?xml version="1.0" encoding="UTF-8" standalone="no"?>
+<!DOCTYPE svg PUBLIC "-//W3C//DTD SVG 1.1//EN"
+ "http://www.w3.org/Graphics/SVG/1.1/DTD/svg11.dtd">
+<!-- Generated by graphviz version 2.43.0 (0)
+ -->
+<!-- Title: Exception Pages: 1 -->
+<svg width="150pt" height="171pt"
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diff --git a/docs345/docbook/classpenify__hook_1_1api__client_1_1APIClient.xml b/docs345/docbook/classpenify__hook_1_1api__client_1_1APIClient.xml
new file mode 100644
index 0000000..72fd732
--- /dev/null
+++ b/docs345/docbook/classpenify__hook_1_1api__client_1_1APIClient.xml
@@ -0,0 +1,206 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_classpenify__hook_1_1api__client_1_1APIClient" xml:lang="en-US">
+<title>penify_hook.api_client.APIClient Class Reference</title>
+<indexterm><primary>penify_hook.api_client.APIClient</primary></indexterm>
+Collaboration diagram for penify_hook.api_client.APIClient:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1api__client_1_1APIClient__coll__graph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+<simplesect>
+    <title>Public Member Functions    </title>
+        <itemizedlist>
+            <listitem><para>def <link linkend="_classpenify__hook_1_1api__client_1_1APIClient_1ad9cb741a8baf2d13f845e25a36311086">__init__</link> (self, <link linkend="_classpenify__hook_1_1api__client_1_1APIClient_1a130cf688ed35dc0e8cbd8320b6b2d872">api_url</link>, str api_token=None, str bearer_token=None)</para>
+</listitem>
+            <listitem><para>def <link linkend="_classpenify__hook_1_1api__client_1_1APIClient_1ac5aad61508c2cafdf6e88e6c7d6c82b3">send_file_for_docstring_generation</link> (self, file_name, content, line_numbers, repo_details=None)</para>
+</listitem>
+            <listitem><para>def <link linkend="_classpenify__hook_1_1api__client_1_1APIClient_1a7ff74798e7d428b4e2f20095287eb2ce">generate_commit_summary</link> (self, git_diff, str instruction=&quot;&quot;, repo_details=None, dict jira_context=None)</para>
+</listitem>
+            <listitem><para>list[str] <link linkend="_classpenify__hook_1_1api__client_1_1APIClient_1a5d2b4a26b24352d951ea79ecc4ff3402">get_supported_file_types</link> (self)</para>
+</listitem>
+            <listitem><para>def <link linkend="_classpenify__hook_1_1api__client_1_1APIClient_1ac0ada470b897935f9fb372cd0e7e51e3">generate_commit_summary_with_llm</link> (self, diff, message, bool generate_description, repo_details, <link linkend="_classpenify__hook_1_1llm__client_1_1LLMClient">LLMClient</link> llm_client, jira_context=None)</para>
+</listitem>
+            <listitem><para>def <link linkend="_classpenify__hook_1_1api__client_1_1APIClient_1ad15b790608e703c8c122aa2ead7dfa99">get_api_key</link> (self)</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Public Attributes    </title>
+        <itemizedlist>
+            <listitem><para><link linkend="_classpenify__hook_1_1api__client_1_1APIClient_1a130cf688ed35dc0e8cbd8320b6b2d872">api_url</link></para>
+</listitem>
+            <listitem><para><link linkend="_classpenify__hook_1_1api__client_1_1APIClient_1a5bb502603717946ad710b49ad9d95237">AUTH_TOKEN</link></para>
+</listitem>
+            <listitem><para><link linkend="_classpenify__hook_1_1api__client_1_1APIClient_1a7d7e2cf42c54eb4f25adee96a09ee7b0">BEARER_TOKEN</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<section>
+<title>Constructor &amp; Destructor Documentation</title>
+<anchor xml:id="_classpenify__hook_1_1api__client_1_1APIClient_1ad9cb741a8baf2d13f845e25a36311086"/><section>
+    <title>__init__()</title>
+<indexterm><primary>__init__</primary><secondary>penify_hook.api_client.APIClient</secondary></indexterm>
+<indexterm><primary>penify_hook.api_client.APIClient</primary><secondary>__init__</secondary></indexterm>
+<para><computeroutput>def penify_hook.api_client.APIClient.__init__ ( self,  api_url, str  api_token = <computeroutput>None</computeroutput>
+, str  bearer_token = <computeroutput>None</computeroutput>
+)</computeroutput></para></section>
+</section>
+<section>
+<title>Member Function Documentation</title>
+<anchor xml:id="_classpenify__hook_1_1api__client_1_1APIClient_1a7ff74798e7d428b4e2f20095287eb2ce"/><section>
+    <title>generate_commit_summary()</title>
+<indexterm><primary>generate_commit_summary</primary><secondary>penify_hook.api_client.APIClient</secondary></indexterm>
+<indexterm><primary>penify_hook.api_client.APIClient</primary><secondary>generate_commit_summary</secondary></indexterm>
+<para><computeroutput>def penify_hook.api_client.APIClient.generate_commit_summary ( self,  git_diff, str  instruction = <computeroutput>&quot;&quot;</computeroutput>
+,  repo_details = <computeroutput>None</computeroutput>
+, dict  jira_context = <computeroutput>None</computeroutput>
+)</computeroutput></para>
+<para><literallayout><computeroutput>Generate a commit summary by sending a POST request to the API endpoint.
+
+This function constructs a payload containing the git diff and any
+additional instructions provided. It then sends this payload to a
+specified API endpoint to generate a summary of the commit. If the
+request is successful, it returns the response from the API; otherwise,
+it returns None.
+
+Args:
+    git_diff (str): The git diff of the commit.
+    instruction (str??): Additional instruction for the commit. Defaults to &quot;&quot;.
+    repo_details (dict??): Details of the git repository. Defaults to None.
+    jira_context (dict??): JIRA issue details to enhance the commit summary. Defaults to None.
+
+Returns:
+    dict: The response from the API if the request is successful, None otherwise.
+
+Raises:
+    Exception: If there is an error during the API request.
+</computeroutput></literallayout> </para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1api__client_1_1APIClient_a7ff74798e7d428b4e2f20095287eb2ce_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_classpenify__hook_1_1api__client_1_1APIClient_1ac0ada470b897935f9fb372cd0e7e51e3"/><section>
+    <title>generate_commit_summary_with_llm()</title>
+<indexterm><primary>generate_commit_summary_with_llm</primary><secondary>penify_hook.api_client.APIClient</secondary></indexterm>
+<indexterm><primary>penify_hook.api_client.APIClient</primary><secondary>generate_commit_summary_with_llm</secondary></indexterm>
+<para><computeroutput>def penify_hook.api_client.APIClient.generate_commit_summary_with_llm ( self,  diff,  message, bool generate_description,  repo_details, <link linkend="_classpenify__hook_1_1llm__client_1_1LLMClient">LLMClient</link> llm_client,  jira_context = <computeroutput>None</computeroutput>
+)</computeroutput></para>
+<para><literallayout><computeroutput>Generates a commit summary using a local LLM client. If an error occurs
+during the generation process,
+it falls back to using the API.
+
+Args:
+    diff (str): The Git diff of changes.
+    message (str): User-provided commit message or instructions.
+    generate_description (bool): Flag indicating whether to generate a description for the commit.
+    repo_details (dict): Details about the repository.
+    llm_client (LLMClient): An instance of LLMClient used to generate the summary.
+    jira_context (JIRAContext?): Optional JIRA issue context to enhance the summary.
+
+Returns:
+    dict: A dictionary containing the title and description for the commit.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1api__client_1_1APIClient_ac0ada470b897935f9fb372cd0e7e51e3_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_classpenify__hook_1_1api__client_1_1APIClient_1ad15b790608e703c8c122aa2ead7dfa99"/><section>
+    <title>get_api_key()</title>
+<indexterm><primary>get_api_key</primary><secondary>penify_hook.api_client.APIClient</secondary></indexterm>
+<indexterm><primary>penify_hook.api_client.APIClient</primary><secondary>get_api_key</secondary></indexterm>
+<para><computeroutput>def penify_hook.api_client.APIClient.get_api_key ( self)</computeroutput></para>
+<para><literallayout><computeroutput>Fetch an API key from a specified URL.
+
+This function sends a GET request to retrieve an API token using a
+Bearer token in the headers. It handles the response and returns the API
+key if the request is successful, or `None` otherwise.
+
+Returns:
+    str: The API key if the request is successful, `None` otherwise.
+</computeroutput></literallayout> </para>
+</section>
+<anchor xml:id="_classpenify__hook_1_1api__client_1_1APIClient_1a5d2b4a26b24352d951ea79ecc4ff3402"/><section>
+    <title>get_supported_file_types()</title>
+<indexterm><primary>get_supported_file_types</primary><secondary>penify_hook.api_client.APIClient</secondary></indexterm>
+<indexterm><primary>penify_hook.api_client.APIClient</primary><secondary>get_supported_file_types</secondary></indexterm>
+<para><computeroutput> list[str] penify_hook.api_client.APIClient.get_supported_file_types ( self)</computeroutput></para>
+<para><literallayout><computeroutput>Retrieve the supported file types from the API.
+
+This function sends a request to the API endpoint
+`/v1/file/supported_languages` to obtain a list of supported file types.
+If the API call is successful (status code 200), it parses the JSON
+response and returns the list of supported file types. If the API call
+fails, it returns a default list of common file types.
+
+Returns:
+    list[str]: A list of supported file types, either from the API or a default set.
+</computeroutput></literallayout> </para>
+</section>
+<anchor xml:id="_classpenify__hook_1_1api__client_1_1APIClient_1ac5aad61508c2cafdf6e88e6c7d6c82b3"/><section>
+    <title>send_file_for_docstring_generation()</title>
+<indexterm><primary>send_file_for_docstring_generation</primary><secondary>penify_hook.api_client.APIClient</secondary></indexterm>
+<indexterm><primary>penify_hook.api_client.APIClient</primary><secondary>send_file_for_docstring_generation</secondary></indexterm>
+<para><computeroutput>def penify_hook.api_client.APIClient.send_file_for_docstring_generation ( self,  file_name,  content,  line_numbers,  repo_details = <computeroutput>None</computeroutput>
+)</computeroutput></para>
+<para><literallayout><computeroutput>Send file content and modified lines to the API and return modified
+content.
+
+This function constructs a payload containing the file path, content,
+and modified line numbers, and sends it to a specified API endpoint for
+processing. It handles the response from the API, returning the modified
+content if the request is successful. If the request fails, it logs the
+error details and returns the original content.
+
+Args:
+    file_name (str): The path to the file being sent.
+    content (str): The content of the file to be processed.
+    line_numbers (list): A list of line numbers that have been modified.
+    repo_details (str?): Additional repository details if applicable. Defaults to None.
+
+Returns:
+    str: The modified content returned by the API, or the original content if the
+        request fails.
+
+Raises:
+    Exception: If there is an error in processing the file and no specific error
+        message is provided.
+</computeroutput></literallayout> </para>
+</section>
+</section>
+<section>
+<title>Member Data Documentation</title>
+<anchor xml:id="_classpenify__hook_1_1api__client_1_1APIClient_1a130cf688ed35dc0e8cbd8320b6b2d872"/><section>
+    <title>api_url</title>
+<indexterm><primary>api_url</primary><secondary>penify_hook.api_client.APIClient</secondary></indexterm>
+<indexterm><primary>penify_hook.api_client.APIClient</primary><secondary>api_url</secondary></indexterm>
+<para><computeroutput>penify_hook.api_client.APIClient.api_url</computeroutput></para></section>
+<anchor xml:id="_classpenify__hook_1_1api__client_1_1APIClient_1a5bb502603717946ad710b49ad9d95237"/><section>
+    <title>AUTH_TOKEN</title>
+<indexterm><primary>AUTH_TOKEN</primary><secondary>penify_hook.api_client.APIClient</secondary></indexterm>
+<indexterm><primary>penify_hook.api_client.APIClient</primary><secondary>AUTH_TOKEN</secondary></indexterm>
+<para><computeroutput>penify_hook.api_client.APIClient.AUTH_TOKEN</computeroutput></para></section>
+<anchor xml:id="_classpenify__hook_1_1api__client_1_1APIClient_1a7d7e2cf42c54eb4f25adee96a09ee7b0"/><section>
+    <title>BEARER_TOKEN</title>
+<indexterm><primary>BEARER_TOKEN</primary><secondary>penify_hook.api_client.APIClient</secondary></indexterm>
+<indexterm><primary>penify_hook.api_client.APIClient</primary><secondary>BEARER_TOKEN</secondary></indexterm>
+<para><computeroutput>penify_hook.api_client.APIClient.BEARER_TOKEN</computeroutput></para></section>
+<para>
+The documentation for this class was generated from the following file:</para>
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/<link linkend="_api__client_8py">api_client.py</link></section>
+</section>
diff --git a/docs345/docbook/classpenify__hook_1_1api__client_1_1APIClient__coll__graph.md5 b/docs345/docbook/classpenify__hook_1_1api__client_1_1APIClient__coll__graph.md5
new file mode 100644
index 0000000..2c7b583
--- /dev/null
+++ b/docs345/docbook/classpenify__hook_1_1api__client_1_1APIClient__coll__graph.md5
@@ -0,0 +1 @@
+92a3e9cee2cd5e4975e6a42b548f0d62
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new file mode 100644
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+++ b/docs345/docbook/classpenify__hook_1_1api__client_1_1APIClient__coll__graph.svg
@@ -0,0 +1,36 @@
+<?xml version="1.0" encoding="UTF-8" standalone="no"?>
+<!DOCTYPE svg PUBLIC "-//W3C//DTD SVG 1.1//EN"
+ "http://www.w3.org/Graphics/SVG/1.1/DTD/svg11.dtd">
+<!-- Generated by graphviz version 2.43.0 (0)
+ -->
+<!-- Title: penify_hook.api_client.APIClient Pages: 1 -->
+<svg width="181pt" height="176pt"
+ viewBox="0.00 0.00 181.00 176.00" xmlns="http://www.w3.org/2000/svg" xmlns:xlink="http://www.w3.org/1999/xlink">
+<g id="graph0" class="graph" transform="scale(1 1) rotate(0) translate(4 172)">
+<title>penify_hook.api_client.APIClient</title>
+<polygon fill="white" stroke="transparent" points="-4,4 -4,-172 177,-172 177,4 -4,4"/>
+<!-- Node1 -->
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+<g id="a_node1"><a xlink:title=" ">
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+<text text-anchor="start" x="8" y="-136.5" font-family="Helvetica,sans-Serif" font-size="10.00">+ api_url</text>
+<text text-anchor="start" x="8" y="-125.5" font-family="Helvetica,sans-Serif" font-size="10.00">+ AUTH_TOKEN</text>
+<text text-anchor="start" x="8" y="-114.5" font-family="Helvetica,sans-Serif" font-size="10.00">+ BEARER_TOKEN</text>
+<polyline fill="none" stroke="black" points="0,-107.5 173,-107.5 "/>
+<text text-anchor="start" x="8" y="-95.5" font-family="Helvetica,sans-Serif" font-size="10.00">+ __init__()</text>
+<text text-anchor="start" x="8" y="-84.5" font-family="Helvetica,sans-Serif" font-size="10.00">+ send_file_for_docstring</text>
+<text text-anchor="start" x="8" y="-73.5" font-family="Helvetica,sans-Serif" font-size="10.00">_generation()</text>
+<text text-anchor="start" x="8" y="-62.5" font-family="Helvetica,sans-Serif" font-size="10.00">+ generate_commit_summary()</text>
+<text text-anchor="start" x="8" y="-51.5" font-family="Helvetica,sans-Serif" font-size="10.00">+ get_supported_file</text>
+<text text-anchor="start" x="8" y="-40.5" font-family="Helvetica,sans-Serif" font-size="10.00">_types()</text>
+<text text-anchor="start" x="8" y="-29.5" font-family="Helvetica,sans-Serif" font-size="10.00">+ generate_commit_summary</text>
+<text text-anchor="start" x="8" y="-18.5" font-family="Helvetica,sans-Serif" font-size="10.00">_with_llm()</text>
+<text text-anchor="start" x="8" y="-7.5" font-family="Helvetica,sans-Serif" font-size="10.00">+ get_api_key()</text>
+</a>
+</g>
+</g>
+</g>
+</svg>
diff --git a/docs345/docbook/classpenify__hook_1_1api__client_1_1APIClient_a7ff74798e7d428b4e2f20095287eb2ce_icgraph.md5 b/docs345/docbook/classpenify__hook_1_1api__client_1_1APIClient_a7ff74798e7d428b4e2f20095287eb2ce_icgraph.md5
new file mode 100644
index 0000000..b12cf91
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+++ b/docs345/docbook/classpenify__hook_1_1api__client_1_1APIClient_a7ff74798e7d428b4e2f20095287eb2ce_icgraph.md5
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+ea70dd7bbb840c4828c970ec1a8f5446
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diff --git a/docs345/docbook/classpenify__hook_1_1api__client_1_1APIClient_a7ff74798e7d428b4e2f20095287eb2ce_icgraph.svg b/docs345/docbook/classpenify__hook_1_1api__client_1_1APIClient_a7ff74798e7d428b4e2f20095287eb2ce_icgraph.svg
new file mode 100644
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@@ -0,0 +1,39 @@
+<?xml version="1.0" encoding="UTF-8" standalone="no"?>
+<!DOCTYPE svg PUBLIC "-//W3C//DTD SVG 1.1//EN"
+ "http://www.w3.org/Graphics/SVG/1.1/DTD/svg11.dtd">
+<!-- Generated by graphviz version 2.43.0 (0)
+ -->
+<!-- Title: penify_hook.api_client.APIClient.generate_commit_summary Pages: 1 -->
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+ viewBox="0.00 0.00 484.00 39.00" xmlns="http://www.w3.org/2000/svg" xmlns:xlink="http://www.w3.org/1999/xlink">
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+</g>
+<!-- Node2 -->
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+<title>Node2</title>
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+<text text-anchor="middle" x="368" y="-7.5" font-family="Helvetica,sans-Serif" font-size="10.00">_commit_summary</text>
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diff --git a/docs345/docbook/classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.xml b/docs345/docbook/classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.xml
new file mode 100644
index 0000000..719a287
--- /dev/null
+++ b/docs345/docbook/classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.xml
@@ -0,0 +1,99 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer" xml:lang="en-US">
+<title>penify_hook.base_analyzer.BaseAnalyzer Class Reference</title>
+<indexterm><primary>penify_hook.base_analyzer.BaseAnalyzer</primary></indexterm>
+Inheritance diagram for penify_hook.base_analyzer.BaseAnalyzer:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer__inherit__graph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+Collaboration diagram for penify_hook.base_analyzer.BaseAnalyzer:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer__coll__graph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+<simplesect>
+    <title>Public Member Functions    </title>
+        <itemizedlist>
+            <listitem><para>def <link linkend="_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1ab1296a3d1e9070d891801876b66f7344">__init__</link> (self, str <link linkend="_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1aa67c06dd12b1bafaeaee81c41dcb7e25">folder_path</link>, <link linkend="_classpenify__hook_1_1api__client_1_1APIClient">APIClient</link> <link linkend="_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a81e9c55709205aaf4ebbe2b41683baf2">api_client</link>)</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Public Attributes    </title>
+        <itemizedlist>
+            <listitem><para><link linkend="_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1aa67c06dd12b1bafaeaee81c41dcb7e25">folder_path</link></para>
+</listitem>
+            <listitem><para><link linkend="_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a957e81a1ab561f6cecfbe999e7b85499">repo_path</link></para>
+</listitem>
+            <listitem><para><link linkend="_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a3a9ddfa1dfba81fe21214fe486389369">repo</link></para>
+</listitem>
+            <listitem><para><link linkend="_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a9cca3465b0cc00d78324b0a9eac1d7f5">repo_details</link></para>
+</listitem>
+            <listitem><para><link linkend="_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1ab702c0c3ba81d159d7c3bcd7ea2abba4">relative_file_path</link></para>
+</listitem>
+            <listitem><para><link linkend="_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a81e9c55709205aaf4ebbe2b41683baf2">api_client</link></para>
+</listitem>
+            <listitem><para><link linkend="_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a0cac0310ec635aa64a34857cf30ce1eb">supported_file_types</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<section>
+<title>Constructor &amp; Destructor Documentation</title>
+<anchor xml:id="_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1ab1296a3d1e9070d891801876b66f7344"/><section>
+    <title>__init__()</title>
+<indexterm><primary>__init__</primary><secondary>penify_hook.base_analyzer.BaseAnalyzer</secondary></indexterm>
+<indexterm><primary>penify_hook.base_analyzer.BaseAnalyzer</primary><secondary>__init__</secondary></indexterm>
+<para><computeroutput>def penify_hook.base_analyzer.BaseAnalyzer.__init__ ( self, str folder_path, <link linkend="_classpenify__hook_1_1api__client_1_1APIClient">APIClient</link> api_client)</computeroutput></para><para>
+Reimplemented in <link linkend="_classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a1bb0358140931d82c7616f12efe31821">penify_hook.folder_analyzer.FolderAnalyzerGenHook</link>, <link linkend="_classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a190c473090b2a07e7cb43073a3211c4b">penify_hook.file_analyzer.FileAnalyzerGenHook</link>, <link linkend="_classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a92275fddb43dbef6dfdb6c1ed6e96d0c">penify_hook.git_analyzer.GitDocGenHook</link>, and <link linkend="_classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1af127d86729e226d74dbeb095b008db3e">penify_hook.commit_analyzer.CommitDocGenHook</link>.</para>
+</section>
+</section>
+<section>
+<title>Member Data Documentation</title>
+<anchor xml:id="_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a81e9c55709205aaf4ebbe2b41683baf2"/><section>
+    <title>api_client</title>
+<indexterm><primary>api_client</primary><secondary>penify_hook.base_analyzer.BaseAnalyzer</secondary></indexterm>
+<indexterm><primary>penify_hook.base_analyzer.BaseAnalyzer</primary><secondary>api_client</secondary></indexterm>
+<para><computeroutput>penify_hook.base_analyzer.BaseAnalyzer.api_client</computeroutput></para></section>
+<anchor xml:id="_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1aa67c06dd12b1bafaeaee81c41dcb7e25"/><section>
+    <title>folder_path</title>
+<indexterm><primary>folder_path</primary><secondary>penify_hook.base_analyzer.BaseAnalyzer</secondary></indexterm>
+<indexterm><primary>penify_hook.base_analyzer.BaseAnalyzer</primary><secondary>folder_path</secondary></indexterm>
+<para><computeroutput>penify_hook.base_analyzer.BaseAnalyzer.folder_path</computeroutput></para></section>
+<anchor xml:id="_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1ab702c0c3ba81d159d7c3bcd7ea2abba4"/><section>
+    <title>relative_file_path</title>
+<indexterm><primary>relative_file_path</primary><secondary>penify_hook.base_analyzer.BaseAnalyzer</secondary></indexterm>
+<indexterm><primary>penify_hook.base_analyzer.BaseAnalyzer</primary><secondary>relative_file_path</secondary></indexterm>
+<para><computeroutput>penify_hook.base_analyzer.BaseAnalyzer.relative_file_path</computeroutput></para></section>
+<anchor xml:id="_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a3a9ddfa1dfba81fe21214fe486389369"/><section>
+    <title>repo</title>
+<indexterm><primary>repo</primary><secondary>penify_hook.base_analyzer.BaseAnalyzer</secondary></indexterm>
+<indexterm><primary>penify_hook.base_analyzer.BaseAnalyzer</primary><secondary>repo</secondary></indexterm>
+<para><computeroutput>penify_hook.base_analyzer.BaseAnalyzer.repo</computeroutput></para></section>
+<anchor xml:id="_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a9cca3465b0cc00d78324b0a9eac1d7f5"/><section>
+    <title>repo_details</title>
+<indexterm><primary>repo_details</primary><secondary>penify_hook.base_analyzer.BaseAnalyzer</secondary></indexterm>
+<indexterm><primary>penify_hook.base_analyzer.BaseAnalyzer</primary><secondary>repo_details</secondary></indexterm>
+<para><computeroutput>penify_hook.base_analyzer.BaseAnalyzer.repo_details</computeroutput></para></section>
+<anchor xml:id="_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a957e81a1ab561f6cecfbe999e7b85499"/><section>
+    <title>repo_path</title>
+<indexterm><primary>repo_path</primary><secondary>penify_hook.base_analyzer.BaseAnalyzer</secondary></indexterm>
+<indexterm><primary>penify_hook.base_analyzer.BaseAnalyzer</primary><secondary>repo_path</secondary></indexterm>
+<para><computeroutput>penify_hook.base_analyzer.BaseAnalyzer.repo_path</computeroutput></para></section>
+<anchor xml:id="_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a0cac0310ec635aa64a34857cf30ce1eb"/><section>
+    <title>supported_file_types</title>
+<indexterm><primary>supported_file_types</primary><secondary>penify_hook.base_analyzer.BaseAnalyzer</secondary></indexterm>
+<indexterm><primary>penify_hook.base_analyzer.BaseAnalyzer</primary><secondary>supported_file_types</secondary></indexterm>
+<para><computeroutput>penify_hook.base_analyzer.BaseAnalyzer.supported_file_types</computeroutput></para></section>
+<para>
+The documentation for this class was generated from the following file:</para>
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/<link linkend="_base__analyzer_8py">base_analyzer.py</link></section>
+</section>
diff --git a/docs345/docbook/classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer__coll__graph.md5 b/docs345/docbook/classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer__coll__graph.md5
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+++ b/docs345/docbook/classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer__coll__graph.svg
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+ "http://www.w3.org/Graphics/SVG/1.1/DTD/svg11.dtd">
+<!-- Generated by graphviz version 2.43.0 (0)
+ -->
+<!-- Title: penify_hook.base_analyzer.BaseAnalyzer Pages: 1 -->
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+ viewBox="0.00 0.00 160.00 143.00" xmlns="http://www.w3.org/2000/svg" xmlns:xlink="http://www.w3.org/1999/xlink">
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+<polygon fill="white" stroke="transparent" points="-4,4 -4,-139 156,-139 156,4 -4,4"/>
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+<g id="a_node1"><a xlink:title=" ">
+<polygon fill="#bfbfbf" stroke="black" points="0,-0.5 0,-134.5 152,-134.5 152,-0.5 0,-0.5"/>
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+<text text-anchor="start" x="8" y="-37.5" font-family="Helvetica,sans-Serif" font-size="10.00">+ api_client</text>
+<text text-anchor="start" x="8" y="-26.5" font-family="Helvetica,sans-Serif" font-size="10.00">+ supported_file_types</text>
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+<text text-anchor="start" x="8" y="-7.5" font-family="Helvetica,sans-Serif" font-size="10.00">+ __init__()</text>
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diff --git a/docs345/docbook/classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer__inherit__graph.md5 b/docs345/docbook/classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer__inherit__graph.md5
new file mode 100644
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+++ b/docs345/docbook/classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer__inherit__graph.md5
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+ "http://www.w3.org/Graphics/SVG/1.1/DTD/svg11.dtd">
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+ viewBox="0.00 0.00 700.00 303.00" xmlns="http://www.w3.org/2000/svg" xmlns:xlink="http://www.w3.org/1999/xlink">
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diff --git a/docs345/docbook/classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook.xml b/docs345/docbook/classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook.xml
new file mode 100644
index 0000000..4209280
--- /dev/null
+++ b/docs345/docbook/classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook.xml
@@ -0,0 +1,229 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook" xml:lang="en-US">
+<title>penify_hook.commit_analyzer.CommitDocGenHook Class Reference</title>
+<indexterm><primary>penify_hook.commit_analyzer.CommitDocGenHook</primary></indexterm>
+Inheritance diagram for penify_hook.commit_analyzer.CommitDocGenHook:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook__inherit__graph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+Collaboration diagram for penify_hook.commit_analyzer.CommitDocGenHook:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook__coll__graph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+<simplesect>
+    <title>Public Member Functions    </title>
+        <itemizedlist>
+            <listitem><para>def <link linkend="_classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1af127d86729e226d74dbeb095b008db3e">__init__</link> (self, str <link linkend="_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a957e81a1ab561f6cecfbe999e7b85499">repo_path</link>, <link linkend="_classpenify__hook_1_1api__client_1_1APIClient">APIClient</link> <link linkend="_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a81e9c55709205aaf4ebbe2b41683baf2">api_client</link>, <link linkend="_classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1ad93360e31f2ec58a0d7c9f08b219028a">llm_client</link>=None, jira_client=None)</para>
+</listitem>
+            <listitem><para>dict <link linkend="_classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a8496194276441fa2eb2fa014eaab9a37">get_summary</link> (self, str instruction, bool generate_description)</para>
+</listitem>
+            <listitem><para>def <link linkend="_classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a6370a03f7ed9175ef6f81e931a105ea9">run</link> (self, Optional[str] msg, bool edit_commit_message, bool generate_description)</para>
+</listitem>
+            <listitem><para>tuple <link linkend="_classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1adda13cc121d96342476ccf72b63a007f">process_jira_integration</link> (self, str title, str description, str msg)</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Public Attributes    </title>
+        <itemizedlist>
+            <listitem><para><link linkend="_classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1ad93360e31f2ec58a0d7c9f08b219028a">llm_client</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Private Member Functions    </title>
+        <itemizedlist>
+            <listitem><para>def <link linkend="_classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1ac999c5cbc852a7ec3b412ccb43c274ca">_amend_commit</link> (self)</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<section>
+<title>Constructor &amp; Destructor Documentation</title>
+<anchor xml:id="_classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1af127d86729e226d74dbeb095b008db3e"/><section>
+    <title>__init__()</title>
+<indexterm><primary>__init__</primary><secondary>penify_hook.commit_analyzer.CommitDocGenHook</secondary></indexterm>
+<indexterm><primary>penify_hook.commit_analyzer.CommitDocGenHook</primary><secondary>__init__</secondary></indexterm>
+<para><computeroutput>def penify_hook.commit_analyzer.CommitDocGenHook.__init__ ( self, str repo_path, <link linkend="_classpenify__hook_1_1api__client_1_1APIClient">APIClient</link> api_client,  llm_client = <computeroutput>None</computeroutput>
+,  jira_client = <computeroutput>None</computeroutput>
+)</computeroutput></para><para>
+Reimplemented from <link linkend="_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1ab1296a3d1e9070d891801876b66f7344">penify_hook.base_analyzer.BaseAnalyzer</link>.</para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_af127d86729e226d74dbeb095b008db3e_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_af127d86729e226d74dbeb095b008db3e_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+</section>
+<section>
+<title>Member Function Documentation</title>
+<anchor xml:id="_classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1ac999c5cbc852a7ec3b412ccb43c274ca"/><section>
+    <title>_amend_commit()</title>
+<indexterm><primary>_amend_commit</primary><secondary>penify_hook.commit_analyzer.CommitDocGenHook</secondary></indexterm>
+<indexterm><primary>penify_hook.commit_analyzer.CommitDocGenHook</primary><secondary>_amend_commit</secondary></indexterm>
+<para><computeroutput>def penify_hook.commit_analyzer.CommitDocGenHook._amend_commit ( self)<computeroutput>[private]</computeroutput></computeroutput></para>
+<para><literallayout><computeroutput>Open the default git editor for editing the commit message.
+
+This function changes the current working directory to the repository
+path, runs the git command to amend the last commit, and opens the
+default editor for the user to modify the commit message. After the
+operation, it returns to the original directory.
+</computeroutput></literallayout> </para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_ac999c5cbc852a7ec3b412ccb43c274ca_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a8496194276441fa2eb2fa014eaab9a37"/><section>
+    <title>get_summary()</title>
+<indexterm><primary>get_summary</primary><secondary>penify_hook.commit_analyzer.CommitDocGenHook</secondary></indexterm>
+<indexterm><primary>penify_hook.commit_analyzer.CommitDocGenHook</primary><secondary>get_summary</secondary></indexterm>
+<para><computeroutput> dict penify_hook.commit_analyzer.CommitDocGenHook.get_summary ( self, str instruction, bool generate_description)</computeroutput></para>
+<para><literallayout><computeroutput>Generate a summary for the commit based on the staged changes.
+
+This function retrieves the differences of the staged changes in the
+repository and generates a commit summary using the provided
+instruction. If there are no changes staged for commit, an exception is
+raised. If a JIRA client is connected, it will attempt to extract issue
+keys from the current branch and use them to fetch context. The summary
+can be generated either with a Language Model (LLM) client or through
+the API client.
+
+Args:
+    instruction (str): A string containing instructions for generating the commit summary.
+    generate_description (bool): Whether to include detailed descriptions in the summary.
+
+Returns:
+    dict: The generated commit summary based on the staged changes, provided
+        instruction, and any relevant JIRA context. The dictionary contains keys
+        such as &apos;summary&apos;, &apos;description&apos;, etc., depending on whether a
+        description was requested.
+
+Raises:
+    ValueError: If there are no changes staged for commit.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_a8496194276441fa2eb2fa014eaab9a37_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_a8496194276441fa2eb2fa014eaab9a37_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1adda13cc121d96342476ccf72b63a007f"/><section>
+    <title>process_jira_integration()</title>
+<indexterm><primary>process_jira_integration</primary><secondary>penify_hook.commit_analyzer.CommitDocGenHook</secondary></indexterm>
+<indexterm><primary>penify_hook.commit_analyzer.CommitDocGenHook</primary><secondary>process_jira_integration</secondary></indexterm>
+<para><computeroutput> tuple penify_hook.commit_analyzer.CommitDocGenHook.process_jira_integration ( self, str title, str description, str msg)</computeroutput></para>
+<para><literallayout><computeroutput>Process JIRA integration for the commit message.
+
+Args:
+    title (str): Generated commit title.
+    description (str): Generated commit description.
+    msg (str): Original user message that might contain JIRA references.
+
+Returns:
+    tuple: A tuple containing the updated commit title and description with
+        included JIRA information.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_adda13cc121d96342476ccf72b63a007f_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_adda13cc121d96342476ccf72b63a007f_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a6370a03f7ed9175ef6f81e931a105ea9"/><section>
+    <title>run()</title>
+<indexterm><primary>run</primary><secondary>penify_hook.commit_analyzer.CommitDocGenHook</secondary></indexterm>
+<indexterm><primary>penify_hook.commit_analyzer.CommitDocGenHook</primary><secondary>run</secondary></indexterm>
+<para><computeroutput>def penify_hook.commit_analyzer.CommitDocGenHook.run ( self, Optional[str] msg, bool edit_commit_message, bool generate_description)</computeroutput></para>
+<para><literallayout><computeroutput>Run the post-commit hook.
+
+This method processes the modified files from the last commit, stages
+them, and creates an auto-commit with an optional message. It also
+handles JIRA integration if available. If there is an error generating
+the commit summary, an exception is raised.
+
+Args:
+    msg (Optional[str]): An optional message to include in the commit.
+    edit_commit_message (bool): A flag indicating whether to open the git commit edit terminal after
+        committing.
+    generate_description (bool): A flag indicating whether to include a description in the commit
+        message.
+
+Raises:
+    Exception: If there is an error generating the commit summary.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_a6370a03f7ed9175ef6f81e931a105ea9_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+</section>
+<section>
+<title>Member Data Documentation</title>
+<anchor xml:id="_classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1ad93360e31f2ec58a0d7c9f08b219028a"/><section>
+    <title>llm_client</title>
+<indexterm><primary>llm_client</primary><secondary>penify_hook.commit_analyzer.CommitDocGenHook</secondary></indexterm>
+<indexterm><primary>penify_hook.commit_analyzer.CommitDocGenHook</primary><secondary>llm_client</secondary></indexterm>
+<para><computeroutput>penify_hook.commit_analyzer.CommitDocGenHook.llm_client</computeroutput></para></section>
+<para>
+The documentation for this class was generated from the following file:</para>
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+</section>
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diff --git a/docs345/docbook/classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook.xml b/docs345/docbook/classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook.xml
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+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook" xml:lang="en-US">
+<title>penify_hook.file_analyzer.FileAnalyzerGenHook Class Reference</title>
+<indexterm><primary>penify_hook.file_analyzer.FileAnalyzerGenHook</primary></indexterm>
+Inheritance diagram for penify_hook.file_analyzer.FileAnalyzerGenHook:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook__inherit__graph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+Collaboration diagram for penify_hook.file_analyzer.FileAnalyzerGenHook:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook__coll__graph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+<simplesect>
+    <title>Public Member Functions    </title>
+        <itemizedlist>
+            <listitem><para>def <link linkend="_classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a190c473090b2a07e7cb43073a3211c4b">__init__</link> (self, str <link linkend="_classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a9b03b88a9ce1b9af945279375048dc32">file_path</link>, <link linkend="_classpenify__hook_1_1api__client_1_1APIClient">APIClient</link> <link linkend="_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a81e9c55709205aaf4ebbe2b41683baf2">api_client</link>)</para>
+</listitem>
+            <listitem><para>def <link linkend="_classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a2cc6c22ef588fccf3eed9bbc57fb6d6e">process_file</link> (self, <link linkend="_classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a9b03b88a9ce1b9af945279375048dc32">file_path</link>, pbar, str new_param=&quot;&quot;)</para>
+</listitem>
+            <listitem><para>def <link linkend="_classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a6ab39391dfb7686f2a2d21a702dd3073">print_processing</link> (self, <link linkend="_classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a9b03b88a9ce1b9af945279375048dc32">file_path</link>)</para>
+</listitem>
+            <listitem><para>def <link linkend="_classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a4f4dffbc432fac3e259d957dd1e187f1">run</link> (self)</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Public Attributes    </title>
+        <itemizedlist>
+            <listitem><para><link linkend="_classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a9b03b88a9ce1b9af945279375048dc32">file_path</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<section>
+<title>Constructor &amp; Destructor Documentation</title>
+<anchor xml:id="_classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a190c473090b2a07e7cb43073a3211c4b"/><section>
+    <title>__init__()</title>
+<indexterm><primary>__init__</primary><secondary>penify_hook.file_analyzer.FileAnalyzerGenHook</secondary></indexterm>
+<indexterm><primary>penify_hook.file_analyzer.FileAnalyzerGenHook</primary><secondary>__init__</secondary></indexterm>
+<para><computeroutput>def penify_hook.file_analyzer.FileAnalyzerGenHook.__init__ ( self, str file_path, <link linkend="_classpenify__hook_1_1api__client_1_1APIClient">APIClient</link> api_client)</computeroutput></para><para>
+Reimplemented from <link linkend="_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1ab1296a3d1e9070d891801876b66f7344">penify_hook.base_analyzer.BaseAnalyzer</link>.</para>
+</section>
+</section>
+<section>
+<title>Member Function Documentation</title>
+<anchor xml:id="_classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a6ab39391dfb7686f2a2d21a702dd3073"/><section>
+    <title>print_processing()</title>
+<indexterm><primary>print_processing</primary><secondary>penify_hook.file_analyzer.FileAnalyzerGenHook</secondary></indexterm>
+<indexterm><primary>penify_hook.file_analyzer.FileAnalyzerGenHook</primary><secondary>print_processing</secondary></indexterm>
+<para><computeroutput>def penify_hook.file_analyzer.FileAnalyzerGenHook.print_processing ( self,  file_path)</computeroutput></para>
+<para><literallayout><computeroutput>Prints a formatted message indicating that a file is being processed.</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_a6ab39391dfb7686f2a2d21a702dd3073_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a2cc6c22ef588fccf3eed9bbc57fb6d6e"/><section>
+    <title>process_file()</title>
+<indexterm><primary>process_file</primary><secondary>penify_hook.file_analyzer.FileAnalyzerGenHook</secondary></indexterm>
+<indexterm><primary>penify_hook.file_analyzer.FileAnalyzerGenHook</primary><secondary>process_file</secondary></indexterm>
+<para><computeroutput>def penify_hook.file_analyzer.FileAnalyzerGenHook.process_file ( self,  file_path,  pbar, str  new_param = <computeroutput>&quot;&quot;</computeroutput>
+)</computeroutput></para>
+<para><literallayout><computeroutput>Processes a file by validating its extension, reading content, generating documentation,
+and writing changes back to the file.
+
+Args:
+    file_path (str): The path of the file to be processed.
+    pbar (tqdm.tqdm): A progress bar object to update the status of processing stages.</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_a2cc6c22ef588fccf3eed9bbc57fb6d6e_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_a2cc6c22ef588fccf3eed9bbc57fb6d6e_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a4f4dffbc432fac3e259d957dd1e187f1"/><section>
+    <title>run()</title>
+<indexterm><primary>run</primary><secondary>penify_hook.file_analyzer.FileAnalyzerGenHook</secondary></indexterm>
+<indexterm><primary>penify_hook.file_analyzer.FileAnalyzerGenHook</primary><secondary>run</secondary></indexterm>
+<para><computeroutput>def penify_hook.file_analyzer.FileAnalyzerGenHook.run ( self)</computeroutput></para>
+<para><literallayout><computeroutput>Runs the documentation process with a progress bar.</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_a4f4dffbc432fac3e259d957dd1e187f1_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+</section>
+<section>
+<title>Member Data Documentation</title>
+<anchor xml:id="_classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a9b03b88a9ce1b9af945279375048dc32"/><section>
+    <title>file_path</title>
+<indexterm><primary>file_path</primary><secondary>penify_hook.file_analyzer.FileAnalyzerGenHook</secondary></indexterm>
+<indexterm><primary>penify_hook.file_analyzer.FileAnalyzerGenHook</primary><secondary>file_path</secondary></indexterm>
+<para><computeroutput>penify_hook.file_analyzer.FileAnalyzerGenHook.file_path</computeroutput></para></section>
+<para>
+The documentation for this class was generated from the following file:</para>
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/<link linkend="_file__analyzer_8py">file_analyzer.py</link></section>
+</section>
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diff --git a/docs345/docbook/classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook.xml b/docs345/docbook/classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook.xml
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+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook" xml:lang="en-US">
+<title>penify_hook.folder_analyzer.FolderAnalyzerGenHook Class Reference</title>
+<indexterm><primary>penify_hook.folder_analyzer.FolderAnalyzerGenHook</primary></indexterm>
+Inheritance diagram for penify_hook.folder_analyzer.FolderAnalyzerGenHook:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook__inherit__graph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+Collaboration diagram for penify_hook.folder_analyzer.FolderAnalyzerGenHook:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook__coll__graph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+<simplesect>
+    <title>Public Member Functions    </title>
+        <itemizedlist>
+            <listitem><para>def <link linkend="_classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a1bb0358140931d82c7616f12efe31821">__init__</link> (self, str <link linkend="_classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a53f73d69cc0f00763ee4830e4f0f7393">dir_path</link>, <link linkend="_classpenify__hook_1_1api__client_1_1APIClient">APIClient</link> <link linkend="_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a81e9c55709205aaf4ebbe2b41683baf2">api_client</link>)</para>
+</listitem>
+            <listitem><para>def <link linkend="_classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a70b845318fc7ac3b607daf26378e19ec">list_all_files_in_dir</link> (self, str <link linkend="_classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a53f73d69cc0f00763ee4830e4f0f7393">dir_path</link>)</para>
+</listitem>
+            <listitem><para>def <link linkend="_classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1afd189d1b8c773bf710a899eb21fd76cc">run</link> (self)</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Public Attributes    </title>
+        <itemizedlist>
+            <listitem><para><link linkend="_classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a53f73d69cc0f00763ee4830e4f0f7393">dir_path</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<section>
+<title>Constructor &amp; Destructor Documentation</title>
+<anchor xml:id="_classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a1bb0358140931d82c7616f12efe31821"/><section>
+    <title>__init__()</title>
+<indexterm><primary>__init__</primary><secondary>penify_hook.folder_analyzer.FolderAnalyzerGenHook</secondary></indexterm>
+<indexterm><primary>penify_hook.folder_analyzer.FolderAnalyzerGenHook</primary><secondary>__init__</secondary></indexterm>
+<para><computeroutput>def penify_hook.folder_analyzer.FolderAnalyzerGenHook.__init__ ( self, str dir_path, <link linkend="_classpenify__hook_1_1api__client_1_1APIClient">APIClient</link> api_client)</computeroutput></para><para>
+Reimplemented from <link linkend="_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1ab1296a3d1e9070d891801876b66f7344">penify_hook.base_analyzer.BaseAnalyzer</link>.</para>
+</section>
+</section>
+<section>
+<title>Member Function Documentation</title>
+<anchor xml:id="_classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a70b845318fc7ac3b607daf26378e19ec"/><section>
+    <title>list_all_files_in_dir()</title>
+<indexterm><primary>list_all_files_in_dir</primary><secondary>penify_hook.folder_analyzer.FolderAnalyzerGenHook</secondary></indexterm>
+<indexterm><primary>penify_hook.folder_analyzer.FolderAnalyzerGenHook</primary><secondary>list_all_files_in_dir</secondary></indexterm>
+<para><computeroutput>def penify_hook.folder_analyzer.FolderAnalyzerGenHook.list_all_files_in_dir ( self, str dir_path)</computeroutput></para>
+<para><literallayout><computeroutput>List all non-hidden files in a directory and its subdirectories.
+
+This function recursively traverses the specified directory and its
+subdirectories, collecting paths of all non-hidden files. It filters out
+hidden directories and files (those starting with a dot) to ensure only
+visible files are returned.
+
+Args:
+    dir_path (str): The path to the directory whose files and subdirectory files need to be
+        listed.
+
+Returns:
+    list: A list containing the full paths of all non-hidden files within the
+        specified directory and its subdirectories.
+</computeroutput></literallayout> </para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_a70b845318fc7ac3b607daf26378e19ec_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1afd189d1b8c773bf710a899eb21fd76cc"/><section>
+    <title>run()</title>
+<indexterm><primary>run</primary><secondary>penify_hook.folder_analyzer.FolderAnalyzerGenHook</secondary></indexterm>
+<indexterm><primary>penify_hook.folder_analyzer.FolderAnalyzerGenHook</primary><secondary>run</secondary></indexterm>
+<para><computeroutput>def penify_hook.folder_analyzer.FolderAnalyzerGenHook.run ( self)</computeroutput></para>
+<para><literallayout><computeroutput>Run the post-commit hook.
+
+This function processes all files in a specified directory using a
+progress bar. It lists all files, initializes a `FileAnalyzerGenHook`
+for each file, and runs it. Errors during processing of individual files
+are caught and logged, but do not stop the processing of other files. A
+progress bar is displayed indicating the number of files processed.
+
+Args:
+    self (PostCommitHook): The instance of the post-commit hook class.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_afd189d1b8c773bf710a899eb21fd76cc_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+</section>
+<section>
+<title>Member Data Documentation</title>
+<anchor xml:id="_classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a53f73d69cc0f00763ee4830e4f0f7393"/><section>
+    <title>dir_path</title>
+<indexterm><primary>dir_path</primary><secondary>penify_hook.folder_analyzer.FolderAnalyzerGenHook</secondary></indexterm>
+<indexterm><primary>penify_hook.folder_analyzer.FolderAnalyzerGenHook</primary><secondary>dir_path</secondary></indexterm>
+<para><computeroutput>penify_hook.folder_analyzer.FolderAnalyzerGenHook.dir_path</computeroutput></para></section>
+<para>
+The documentation for this class was generated from the following file:</para>
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/<link linkend="_folder__analyzer_8py">folder_analyzer.py</link></section>
+</section>
diff --git a/docs345/docbook/classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook__coll__graph.md5 b/docs345/docbook/classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook__coll__graph.md5
new file mode 100644
index 0000000..320340b
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new file mode 100644
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diff --git a/docs345/docbook/classpenify__hook_1_1git__analyzer_1_1GitDocGenHook.xml b/docs345/docbook/classpenify__hook_1_1git__analyzer_1_1GitDocGenHook.xml
new file mode 100644
index 0000000..1cd5194
--- /dev/null
+++ b/docs345/docbook/classpenify__hook_1_1git__analyzer_1_1GitDocGenHook.xml
@@ -0,0 +1,197 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_classpenify__hook_1_1git__analyzer_1_1GitDocGenHook" xml:lang="en-US">
+<title>penify_hook.git_analyzer.GitDocGenHook Class Reference</title>
+<indexterm><primary>penify_hook.git_analyzer.GitDocGenHook</primary></indexterm>
+Inheritance diagram for penify_hook.git_analyzer.GitDocGenHook:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook__inherit__graph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+Collaboration diagram for penify_hook.git_analyzer.GitDocGenHook:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook__coll__graph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+<simplesect>
+    <title>Public Member Functions    </title>
+        <itemizedlist>
+            <listitem><para>def <link linkend="_classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a92275fddb43dbef6dfdb6c1ed6e96d0c">__init__</link> (self, str <link linkend="_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a957e81a1ab561f6cecfbe999e7b85499">repo_path</link>, <link linkend="_classpenify__hook_1_1api__client_1_1APIClient">APIClient</link> <link linkend="_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a81e9c55709205aaf4ebbe2b41683baf2">api_client</link>)</para>
+</listitem>
+            <listitem><para>def <link linkend="_classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a17549766100e91eb94b5f1a1d34bf481">get_modified_files_in_last_commit</link> (self)</para>
+</listitem>
+            <listitem><para>def <link linkend="_classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a974d2f51315ed6a1965a7fd7e2ced0cd">get_modified_lines</link> (self, diff_text)</para>
+</listitem>
+            <listitem><para>def <link linkend="_classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a05313caa22b173ce75638f0db08eeb85">process_file</link> (self, file_path)</para>
+</listitem>
+            <listitem><para>def <link linkend="_classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a3beba14e92d717391a74bb70b1fab0ae">run</link> (self)</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Additional Inherited Members    </title>
+</simplesect>
+<section>
+<title>Constructor &amp; Destructor Documentation</title>
+<anchor xml:id="_classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a92275fddb43dbef6dfdb6c1ed6e96d0c"/><section>
+    <title>__init__()</title>
+<indexterm><primary>__init__</primary><secondary>penify_hook.git_analyzer.GitDocGenHook</secondary></indexterm>
+<indexterm><primary>penify_hook.git_analyzer.GitDocGenHook</primary><secondary>__init__</secondary></indexterm>
+<para><computeroutput>def penify_hook.git_analyzer.GitDocGenHook.__init__ ( self, str repo_path, <link linkend="_classpenify__hook_1_1api__client_1_1APIClient">APIClient</link> api_client)</computeroutput></para><para>
+Reimplemented from <link linkend="_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1ab1296a3d1e9070d891801876b66f7344">penify_hook.base_analyzer.BaseAnalyzer</link>.</para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_a92275fddb43dbef6dfdb6c1ed6e96d0c_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_a92275fddb43dbef6dfdb6c1ed6e96d0c_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+</section>
+<section>
+<title>Member Function Documentation</title>
+<anchor xml:id="_classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a17549766100e91eb94b5f1a1d34bf481"/><section>
+    <title>get_modified_files_in_last_commit()</title>
+<indexterm><primary>get_modified_files_in_last_commit</primary><secondary>penify_hook.git_analyzer.GitDocGenHook</secondary></indexterm>
+<indexterm><primary>penify_hook.git_analyzer.GitDocGenHook</primary><secondary>get_modified_files_in_last_commit</secondary></indexterm>
+<para><computeroutput>def penify_hook.git_analyzer.GitDocGenHook.get_modified_files_in_last_commit ( self)</computeroutput></para>
+<para><literallayout><computeroutput>Get the list of files modified in the last commit.
+
+This function retrieves the files that were modified in the most recent
+commit of the repository. It accesses the last commit and iterates
+through the differences to compile a list of unique file paths that were
+changed. The function returns this list for further processing or
+analysis.
+
+Returns:
+    list: A list of file paths that were modified in the last commit.
+</computeroutput></literallayout> </para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_a17549766100e91eb94b5f1a1d34bf481_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a974d2f51315ed6a1965a7fd7e2ced0cd"/><section>
+    <title>get_modified_lines()</title>
+<indexterm><primary>get_modified_lines</primary><secondary>penify_hook.git_analyzer.GitDocGenHook</secondary></indexterm>
+<indexterm><primary>penify_hook.git_analyzer.GitDocGenHook</primary><secondary>get_modified_lines</secondary></indexterm>
+<para><computeroutput>def penify_hook.git_analyzer.GitDocGenHook.get_modified_lines ( self,  diff_text)</computeroutput></para>
+<para><literallayout><computeroutput>Extract modified line numbers from a diff text.
+
+This function processes a diff text to identify and extract the line
+numbers that have been modified. It distinguishes between added and
+deleted lines and keeps track of the current line number as it parses
+through the diff. The function handles hunk headers and ensures that any
+deletions at the end of the file are also captured.
+
+Args:
+    diff_text (str): A string containing the diff text to be processed.
+
+Returns:
+    list: A sorted list of unique line numbers that have been modified.
+</computeroutput></literallayout> </para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_a974d2f51315ed6a1965a7fd7e2ced0cd_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a05313caa22b173ce75638f0db08eeb85"/><section>
+    <title>process_file()</title>
+<indexterm><primary>process_file</primary><secondary>penify_hook.git_analyzer.GitDocGenHook</secondary></indexterm>
+<indexterm><primary>penify_hook.git_analyzer.GitDocGenHook</primary><secondary>process_file</secondary></indexterm>
+<para><computeroutput>def penify_hook.git_analyzer.GitDocGenHook.process_file ( self,  file_path)</computeroutput></para>
+<para><literallayout><computeroutput>Process a file by checking its type, reading its content, and sending it
+to an API.
+
+This method constructs the absolute path of the specified file and
+verifies if the file has a valid extension. If the file type is
+supported, it reads the content of the file and retrieves the
+differences from the last commit in the repository. If changes are
+detected, it sends the file content along with the modified lines to an
+API for further processing. If the API response indicates no changes,
+the original file will not be overwritten.
+
+Args:
+    file_path (str): The relative path to the file to be processed.
+
+Returns:
+    bool: True if the file was successfully processed and updated, False
+        otherwise.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_a05313caa22b173ce75638f0db08eeb85_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_a05313caa22b173ce75638f0db08eeb85_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a3beba14e92d717391a74bb70b1fab0ae"/><section>
+    <title>run()</title>
+<indexterm><primary>run</primary><secondary>penify_hook.git_analyzer.GitDocGenHook</secondary></indexterm>
+<indexterm><primary>penify_hook.git_analyzer.GitDocGenHook</primary><secondary>run</secondary></indexterm>
+<para><computeroutput>def penify_hook.git_analyzer.GitDocGenHook.run ( self)</computeroutput></para>
+<para><literallayout><computeroutput>Run the post-commit hook.
+
+This method retrieves the list of modified files from the last commit
+and processes each file. It stages any files that have been modified
+during processing and creates an auto-commit if changes were made. A
+progress bar is displayed to indicate the processing status of each
+file. The method handles any exceptions that occur during file
+processing, printing an error message for each file that fails to
+process. If any modifications are made to the files, an auto-commit is
+created to save those changes.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_a3beba14e92d717391a74bb70b1fab0ae_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<para>
+The documentation for this class was generated from the following file:</para>
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/<link linkend="_git__analyzer_8py">git_analyzer.py</link></section>
+</section>
diff --git a/docs345/docbook/classpenify__hook_1_1git__analyzer_1_1GitDocGenHook__coll__graph.md5 b/docs345/docbook/classpenify__hook_1_1git__analyzer_1_1GitDocGenHook__coll__graph.md5
new file mode 100644
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diff --git a/docs345/docbook/classpenify__hook_1_1jira__client_1_1JiraClient.xml b/docs345/docbook/classpenify__hook_1_1jira__client_1_1JiraClient.xml
new file mode 100644
index 0000000..1680784
--- /dev/null
+++ b/docs345/docbook/classpenify__hook_1_1jira__client_1_1JiraClient.xml
@@ -0,0 +1,447 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_classpenify__hook_1_1jira__client_1_1JiraClient" xml:lang="en-US">
+<title>penify_hook.jira_client.JiraClient Class Reference</title>
+<indexterm><primary>penify_hook.jira_client.JiraClient</primary></indexterm>
+Collaboration diagram for penify_hook.jira_client.JiraClient:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1jira__client_1_1JiraClient__coll__graph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+<simplesect>
+    <title>Public Member Functions    </title>
+        <itemizedlist>
+            <listitem><para>def <link linkend="_classpenify__hook_1_1jira__client_1_1JiraClient_1a47efc1ec07389c960f2dfb37ba8c09f5">__init__</link> (self, str <link linkend="_classpenify__hook_1_1jira__client_1_1JiraClient_1a3c0cfecff02a75cb7001509a595b8197">jira_url</link>=None, str <link linkend="_classpenify__hook_1_1jira__client_1_1JiraClient_1ae56104d5aa7bda7bb26d169c4b46038c">jira_user</link>=None, str <link linkend="_classpenify__hook_1_1jira__client_1_1JiraClient_1afc5c90e53b702f9fc27e2ee7d3f991b9">jira_api_token</link>=None)</para>
+</listitem>
+            <listitem><para>bool <link linkend="_classpenify__hook_1_1jira__client_1_1JiraClient_1a00d0f9ae006313a21576362d26ac5ec8">is_connected</link> (self)</para>
+</listitem>
+            <listitem><para>List[str] <link linkend="_classpenify__hook_1_1jira__client_1_1JiraClient_1a093d6456fe053ef7a7862d5d6851910c">extract_issue_keys_from_branch</link> (self, str branch_name)</para>
+</listitem>
+            <listitem><para>List[str] <link linkend="_classpenify__hook_1_1jira__client_1_1JiraClient_1ad2823ad1d3baaedd38039913c3a97fd7">extract_issue_keys</link> (self, str text)</para>
+</listitem>
+            <listitem><para>Optional[Dict[str, Any]] <link linkend="_classpenify__hook_1_1jira__client_1_1JiraClient_1a65f6924819084b7c8d268956a784804a">get_issue_details</link> (self, str issue_key)</para>
+</listitem>
+            <listitem><para>bool <link linkend="_classpenify__hook_1_1jira__client_1_1JiraClient_1aa1f374116c64cd5f1492ec7f7e40f9c1">add_comment</link> (self, str issue_key, str comment)</para>
+</listitem>
+            <listitem><para>bool <link linkend="_classpenify__hook_1_1jira__client_1_1JiraClient_1aca8837552d37bfd611de23441a240826">update_issue_status</link> (self, str issue_key, str transition_name)</para>
+</listitem>
+            <listitem><para>tuple <link linkend="_classpenify__hook_1_1jira__client_1_1JiraClient_1a49ea1149758f7f5212149d357b13cc23">format_commit_message_with_jira_info</link> (self, str commit_title, str commit_description, List[str] issue_keys=None)</para>
+</listitem>
+            <listitem><para>Dict[str, Any] <link linkend="_classpenify__hook_1_1jira__client_1_1JiraClient_1aa967169a4b7970c67c0947b9ac56f746">get_detailed_issue_context</link> (self, str issue_key)</para>
+</listitem>
+            <listitem><para>Dict[str, Any] <link linkend="_classpenify__hook_1_1jira__client_1_1JiraClient_1afb41ce6f13c30b1265d439ddf04bf2cd">get_commit_context_from_issues</link> (self, List[str] issue_keys)</para>
+</listitem>
+            <listitem><para>tuple <link linkend="_classpenify__hook_1_1jira__client_1_1JiraClient_1a70d2c5a6432aa6f238da0ff65d49a760">enhance_commit_message</link> (self, str title, str description, List[str] issue_keys)</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Public Attributes    </title>
+        <itemizedlist>
+            <listitem><para><link linkend="_classpenify__hook_1_1jira__client_1_1JiraClient_1a3c0cfecff02a75cb7001509a595b8197">jira_url</link></para>
+</listitem>
+            <listitem><para><link linkend="_classpenify__hook_1_1jira__client_1_1JiraClient_1ae56104d5aa7bda7bb26d169c4b46038c">jira_user</link></para>
+</listitem>
+            <listitem><para><link linkend="_classpenify__hook_1_1jira__client_1_1JiraClient_1afc5c90e53b702f9fc27e2ee7d3f991b9">jira_api_token</link></para>
+</listitem>
+            <listitem><para><link linkend="_classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6">jira_client</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<section>
+<title>Detailed Description</title>
+
+<para><literallayout><computeroutput>Client for interacting with JIRA API
+</computeroutput></literallayout> </para>
+</section>
+<section>
+<title>Constructor &amp; Destructor Documentation</title>
+<anchor xml:id="_classpenify__hook_1_1jira__client_1_1JiraClient_1a47efc1ec07389c960f2dfb37ba8c09f5"/><section>
+    <title>__init__()</title>
+<indexterm><primary>__init__</primary><secondary>penify_hook.jira_client.JiraClient</secondary></indexterm>
+<indexterm><primary>penify_hook.jira_client.JiraClient</primary><secondary>__init__</secondary></indexterm>
+<para><computeroutput>def penify_hook.jira_client.JiraClient.__init__ ( self, str  jira_url = <computeroutput>None</computeroutput>
+, str  jira_user = <computeroutput>None</computeroutput>
+, str  jira_api_token = <computeroutput>None</computeroutput>
+)</computeroutput></para>
+<para><literallayout><computeroutput>Initialize the JIRA client.
+
+Args:
+    jira_url: Base URL for JIRA instance (e.g., &quot;https://your-domain.atlassian.net&quot;)
+    jira_user: JIRA username or email
+    jira_api_token: JIRA API token
+</computeroutput></literallayout> </para>
+</section>
+</section>
+<section>
+<title>Member Function Documentation</title>
+<anchor xml:id="_classpenify__hook_1_1jira__client_1_1JiraClient_1aa1f374116c64cd5f1492ec7f7e40f9c1"/><section>
+    <title>add_comment()</title>
+<indexterm><primary>add_comment</primary><secondary>penify_hook.jira_client.JiraClient</secondary></indexterm>
+<indexterm><primary>penify_hook.jira_client.JiraClient</primary><secondary>add_comment</secondary></indexterm>
+<para><computeroutput> bool penify_hook.jira_client.JiraClient.add_comment ( self, str issue_key, str comment)</computeroutput></para>
+<para><literallayout><computeroutput>Add a comment to a JIRA issue.
+
+Args:
+    issue_key (str): JIRA issue key (e.g., &quot;PROJECT-123&quot;)
+    comment (str): Comment text to add
+
+Returns:
+    bool: True if the comment was added successfully, False otherwise
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1jira__client_1_1JiraClient_aa1f374116c64cd5f1492ec7f7e40f9c1_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1jira__client_1_1JiraClient_aa1f374116c64cd5f1492ec7f7e40f9c1_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_classpenify__hook_1_1jira__client_1_1JiraClient_1a70d2c5a6432aa6f238da0ff65d49a760"/><section>
+    <title>enhance_commit_message()</title>
+<indexterm><primary>enhance_commit_message</primary><secondary>penify_hook.jira_client.JiraClient</secondary></indexterm>
+<indexterm><primary>penify_hook.jira_client.JiraClient</primary><secondary>enhance_commit_message</secondary></indexterm>
+<para><computeroutput> tuple penify_hook.jira_client.JiraClient.enhance_commit_message ( self, str title, str description, List[str] issue_keys)</computeroutput></para>
+<para><literallayout><computeroutput>Enhance a commit message with business and technical context from JIRA
+issues.
+
+Args:
+    title (str): Original commit title.
+    description (str): Original commit description.
+    issue_keys (List[str]): List of JIRA issue keys to include in the enhanced commit message.
+
+Returns:
+    tuple: A tuple containing the enhanced commit title and description with added
+        context from JIRA issues.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1jira__client_1_1JiraClient_a70d2c5a6432aa6f238da0ff65d49a760_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_classpenify__hook_1_1jira__client_1_1JiraClient_1ad2823ad1d3baaedd38039913c3a97fd7"/><section>
+    <title>extract_issue_keys()</title>
+<indexterm><primary>extract_issue_keys</primary><secondary>penify_hook.jira_client.JiraClient</secondary></indexterm>
+<indexterm><primary>penify_hook.jira_client.JiraClient</primary><secondary>extract_issue_keys</secondary></indexterm>
+<para><computeroutput> List[str] penify_hook.jira_client.JiraClient.extract_issue_keys ( self, str text)</computeroutput></para>
+<para><literallayout><computeroutput>Extract JIRA issue keys from a given text.
+
+This function searches through the provided text to find and return all
+unique JIRA issue keys. A JIRA issue key typically follows the pattern
+of PROJECT-123, where PROJECT is alphanumeric and consists of at least
+one uppercase letter followed by one or more alphanumeric characters,
+and 123 is a numeric sequence.
+
+Args:
+    text (str): The text in which to search for JIRA issue keys.
+
+Returns:
+    List[str]: A list of unique JIRA issue keys found in the text.
+</computeroutput></literallayout> </para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1jira__client_1_1JiraClient_ad2823ad1d3baaedd38039913c3a97fd7_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_classpenify__hook_1_1jira__client_1_1JiraClient_1a093d6456fe053ef7a7862d5d6851910c"/><section>
+    <title>extract_issue_keys_from_branch()</title>
+<indexterm><primary>extract_issue_keys_from_branch</primary><secondary>penify_hook.jira_client.JiraClient</secondary></indexterm>
+<indexterm><primary>penify_hook.jira_client.JiraClient</primary><secondary>extract_issue_keys_from_branch</secondary></indexterm>
+<para><computeroutput> List[str] penify_hook.jira_client.JiraClient.extract_issue_keys_from_branch ( self, str branch_name)</computeroutput></para>
+<para><literallayout><computeroutput>Extracts JIRA issue keys from a branch name.
+
+This function searches through a given git branch name to find and
+return any JIRA issue keys that match the pattern. Common conventions
+for JIRA issue keys in branch names include: -
+feature/PROJECT-123-description - bugfix/PROJECT-123-fix-something -
+hotfix/PROJECT-123/short-desc
+
+Args:
+    branch_name (str): The name of the git branch to search for JIRA issue keys.
+
+Returns:
+    List[str]: A list of unique JIRA issue keys found in the branch name.
+
+Examples:
+    extract_issue_keys_from_branch(&quot;feature/PROJ-456-add-new-feature&quot;)
+    # Output: [&apos;PROJ-456&apos;]
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1jira__client_1_1JiraClient_a093d6456fe053ef7a7862d5d6851910c_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1jira__client_1_1JiraClient_a093d6456fe053ef7a7862d5d6851910c_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_classpenify__hook_1_1jira__client_1_1JiraClient_1a49ea1149758f7f5212149d357b13cc23"/><section>
+    <title>format_commit_message_with_jira_info()</title>
+<indexterm><primary>format_commit_message_with_jira_info</primary><secondary>penify_hook.jira_client.JiraClient</secondary></indexterm>
+<indexterm><primary>penify_hook.jira_client.JiraClient</primary><secondary>format_commit_message_with_jira_info</secondary></indexterm>
+<para><computeroutput> tuple penify_hook.jira_client.JiraClient.format_commit_message_with_jira_info ( self, str commit_title, str commit_description, List[str]  issue_keys = <computeroutput>None</computeroutput>
+)</computeroutput></para>
+<para><literallayout><computeroutput>Format commit message with JIRA issue information.
+
+Args:
+    commit_title (str): The original commit title.
+    commit_description (str): The original commit description.
+    issue_keys (List[str]?): A list of JIRA issue keys to include in the commit message. If not
+        provided, issue keys will be extracted from both the title and the
+        description.
+
+Returns:
+    tuple: A tuple containing the updated commit title and description with JIRA
+        information included.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1jira__client_1_1JiraClient_a49ea1149758f7f5212149d357b13cc23_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1jira__client_1_1JiraClient_a49ea1149758f7f5212149d357b13cc23_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_classpenify__hook_1_1jira__client_1_1JiraClient_1afb41ce6f13c30b1265d439ddf04bf2cd"/><section>
+    <title>get_commit_context_from_issues()</title>
+<indexterm><primary>get_commit_context_from_issues</primary><secondary>penify_hook.jira_client.JiraClient</secondary></indexterm>
+<indexterm><primary>penify_hook.jira_client.JiraClient</primary><secondary>get_commit_context_from_issues</secondary></indexterm>
+<para><computeroutput> Dict[str, Any] penify_hook.jira_client.JiraClient.get_commit_context_from_issues ( self, List[str] issue_keys)</computeroutput></para>
+<para><literallayout><computeroutput>Gather contextual information from JIRA issues to improve commit
+messages.
+
+This function processes a list of JIRA issue keys, retrieves detailed
+context for each issue, and aggregates it into a dictionary that can be
+used to enhance commit messages. It first retrieves the primary issue
+(the first key in the list) and then gathers basic details for any
+related issues. The resulting context includes information from both the
+primary and related issues, along with all issue keys.
+
+Args:
+    issue_keys: List of JIRA issue keys to gather information from
+
+Returns:
+    Dict containing business and technical context from the issues
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1jira__client_1_1JiraClient_afb41ce6f13c30b1265d439ddf04bf2cd_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1jira__client_1_1JiraClient_afb41ce6f13c30b1265d439ddf04bf2cd_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_classpenify__hook_1_1jira__client_1_1JiraClient_1aa967169a4b7970c67c0947b9ac56f746"/><section>
+    <title>get_detailed_issue_context()</title>
+<indexterm><primary>get_detailed_issue_context</primary><secondary>penify_hook.jira_client.JiraClient</secondary></indexterm>
+<indexterm><primary>penify_hook.jira_client.JiraClient</primary><secondary>get_detailed_issue_context</secondary></indexterm>
+<para><computeroutput> Dict[str, Any] penify_hook.jira_client.JiraClient.get_detailed_issue_context ( self, str issue_key)</computeroutput></para>
+<para><literallayout><computeroutput>Retrieve comprehensive details about a JIRA issue including context for
+better commit messages.
+
+This function fetches detailed information from a specified JIRA issue
+and constructs a dictionary containing various context fields such as
+the issue summary, description, type, status, priority, comments, URL,
+and additional custom fields like acceptance criteria and sprint
+information. If any errors occur during the fetching process,
+appropriate warnings or errors are logged.
+
+Args:
+    issue_key (str): The JIRA issue key (e.g., &quot;PROJECT-123&quot;).
+
+Returns:
+    Dict[str, Any]: A dictionary containing business and technical context from the issue.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1jira__client_1_1JiraClient_aa967169a4b7970c67c0947b9ac56f746_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1jira__client_1_1JiraClient_aa967169a4b7970c67c0947b9ac56f746_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_classpenify__hook_1_1jira__client_1_1JiraClient_1a65f6924819084b7c8d268956a784804a"/><section>
+    <title>get_issue_details()</title>
+<indexterm><primary>get_issue_details</primary><secondary>penify_hook.jira_client.JiraClient</secondary></indexterm>
+<indexterm><primary>penify_hook.jira_client.JiraClient</primary><secondary>get_issue_details</secondary></indexterm>
+<para><computeroutput> Optional[Dict[str, Any]] penify_hook.jira_client.JiraClient.get_issue_details ( self, str issue_key)</computeroutput></para>
+<para><literallayout><computeroutput>Retrieve details of a JIRA issue based on its key.
+
+This function fetches detailed information about a specified JIRA issue
+using the provided issue key. It checks if the JIRA client is connected
+before attempting to retrieve the issue. If the client is not connected,
+it logs a warning and returns `None`. The function then attempts to
+fetch the issue from the JIRA server and constructs a dictionary
+containing various details about the issue such as its key, summary,
+status, description, assignee, reporter, type, priority, and URL. If any
+errors occur during this process, they are logged, and `None` is
+returned.
+
+Args:
+    issue_key (str): The JIRA issue key (e.g., &quot;PROJECT-123&quot;).
+
+Returns:
+    Dict[str, Any] or None: A dictionary containing the details of the JIRA
+        issue if found, otherwise `None`.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1jira__client_1_1JiraClient_a65f6924819084b7c8d268956a784804a_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1jira__client_1_1JiraClient_a65f6924819084b7c8d268956a784804a_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_classpenify__hook_1_1jira__client_1_1JiraClient_1a00d0f9ae006313a21576362d26ac5ec8"/><section>
+    <title>is_connected()</title>
+<indexterm><primary>is_connected</primary><secondary>penify_hook.jira_client.JiraClient</secondary></indexterm>
+<indexterm><primary>penify_hook.jira_client.JiraClient</primary><secondary>is_connected</secondary></indexterm>
+<para><computeroutput> bool penify_hook.jira_client.JiraClient.is_connected ( self)</computeroutput></para>
+<para><literallayout><computeroutput>Check if the JIRA client is connected.
+
+This function verifies whether the JIRA client has successfully
+established a connection. It returns `True` if the client is connected,
+and `False` otherwise.
+
+Returns:
+    bool: True if the JIRA client is connected, False otherwise
+</computeroutput></literallayout> </para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1jira__client_1_1JiraClient_a00d0f9ae006313a21576362d26ac5ec8_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_classpenify__hook_1_1jira__client_1_1JiraClient_1aca8837552d37bfd611de23441a240826"/><section>
+    <title>update_issue_status()</title>
+<indexterm><primary>update_issue_status</primary><secondary>penify_hook.jira_client.JiraClient</secondary></indexterm>
+<indexterm><primary>penify_hook.jira_client.JiraClient</primary><secondary>update_issue_status</secondary></indexterm>
+<para><computeroutput> bool penify_hook.jira_client.JiraClient.update_issue_status ( self, str issue_key, str transition_name)</computeroutput></para>
+<para><literallayout><computeroutput>Update the status of a JIRA issue.
+
+Args:
+    issue_key (str): The key of the JIRA issue to be updated.
+    transition_name (str): The name of the desired transition.
+
+Returns:
+    bool: True if the status was successfully updated, False otherwise.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1jira__client_1_1JiraClient_aca8837552d37bfd611de23441a240826_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+</section>
+<section>
+<title>Member Data Documentation</title>
+<anchor xml:id="_classpenify__hook_1_1jira__client_1_1JiraClient_1afc5c90e53b702f9fc27e2ee7d3f991b9"/><section>
+    <title>jira_api_token</title>
+<indexterm><primary>jira_api_token</primary><secondary>penify_hook.jira_client.JiraClient</secondary></indexterm>
+<indexterm><primary>penify_hook.jira_client.JiraClient</primary><secondary>jira_api_token</secondary></indexterm>
+<para><computeroutput>penify_hook.jira_client.JiraClient.jira_api_token</computeroutput></para></section>
+<anchor xml:id="_classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6"/><section>
+    <title>jira_client</title>
+<indexterm><primary>jira_client</primary><secondary>penify_hook.jira_client.JiraClient</secondary></indexterm>
+<indexterm><primary>penify_hook.jira_client.JiraClient</primary><secondary>jira_client</secondary></indexterm>
+<para><computeroutput>penify_hook.jira_client.JiraClient.jira_client</computeroutput></para></section>
+<anchor xml:id="_classpenify__hook_1_1jira__client_1_1JiraClient_1a3c0cfecff02a75cb7001509a595b8197"/><section>
+    <title>jira_url</title>
+<indexterm><primary>jira_url</primary><secondary>penify_hook.jira_client.JiraClient</secondary></indexterm>
+<indexterm><primary>penify_hook.jira_client.JiraClient</primary><secondary>jira_url</secondary></indexterm>
+<para><computeroutput>penify_hook.jira_client.JiraClient.jira_url</computeroutput></para></section>
+<anchor xml:id="_classpenify__hook_1_1jira__client_1_1JiraClient_1ae56104d5aa7bda7bb26d169c4b46038c"/><section>
+    <title>jira_user</title>
+<indexterm><primary>jira_user</primary><secondary>penify_hook.jira_client.JiraClient</secondary></indexterm>
+<indexterm><primary>penify_hook.jira_client.JiraClient</primary><secondary>jira_user</secondary></indexterm>
+<para><computeroutput>penify_hook.jira_client.JiraClient.jira_user</computeroutput></para></section>
+<para>
+The documentation for this class was generated from the following file:</para>
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/<link linkend="_jira__client_8py">jira_client.py</link></section>
+</section>
diff --git a/docs345/docbook/classpenify__hook_1_1jira__client_1_1JiraClient__coll__graph.md5 b/docs345/docbook/classpenify__hook_1_1jira__client_1_1JiraClient__coll__graph.md5
new file mode 100644
index 0000000..fd79a8c
--- /dev/null
+++ b/docs345/docbook/classpenify__hook_1_1jira__client_1_1JiraClient__coll__graph.md5
@@ -0,0 +1 @@
+6c94c8bb54063a87c9a021e499d2535a
\ No newline at end of file
diff --git a/docs345/docbook/classpenify__hook_1_1jira__client_1_1JiraClient__coll__graph.svg b/docs345/docbook/classpenify__hook_1_1jira__client_1_1JiraClient__coll__graph.svg
new file mode 100644
index 0000000..9d17916
--- /dev/null
+++ b/docs345/docbook/classpenify__hook_1_1jira__client_1_1JiraClient__coll__graph.svg
@@ -0,0 +1,44 @@
+<?xml version="1.0" encoding="UTF-8" standalone="no"?>
+<!DOCTYPE svg PUBLIC "-//W3C//DTD SVG 1.1//EN"
+ "http://www.w3.org/Graphics/SVG/1.1/DTD/svg11.dtd">
+<!-- Generated by graphviz version 2.43.0 (0)
+ -->
+<!-- Title: penify_hook.jira_client.JiraClient Pages: 1 -->
+<svg width="177pt" height="264pt"
+ viewBox="0.00 0.00 177.00 264.00" xmlns="http://www.w3.org/2000/svg" xmlns:xlink="http://www.w3.org/1999/xlink">
+<g id="graph0" class="graph" transform="scale(1 1) rotate(0) translate(4 260)">
+<title>penify_hook.jira_client.JiraClient</title>
+<polygon fill="white" stroke="transparent" points="-4,4 -4,-260 173,-260 173,4 -4,4"/>
+<!-- Node1 -->
+<g id="node1" class="node">
+<title>Node1</title>
+<g id="a_node1"><a xlink:title=" ">
+<polygon fill="#bfbfbf" stroke="black" points="0,-0.5 0,-255.5 169,-255.5 169,-0.5 0,-0.5"/>
+<text text-anchor="start" x="8" y="-243.5" font-family="Helvetica,sans-Serif" font-size="10.00">penify_hook.jira_client.</text>
+<text text-anchor="middle" x="84.5" y="-232.5" font-family="Helvetica,sans-Serif" font-size="10.00">JiraClient</text>
+<polyline fill="none" stroke="black" points="0,-225.5 169,-225.5 "/>
+<text text-anchor="start" x="8" y="-213.5" font-family="Helvetica,sans-Serif" font-size="10.00">+ jira_url</text>
+<text text-anchor="start" x="8" y="-202.5" font-family="Helvetica,sans-Serif" font-size="10.00">+ jira_user</text>
+<text text-anchor="start" x="8" y="-191.5" font-family="Helvetica,sans-Serif" font-size="10.00">+ jira_api_token</text>
+<text text-anchor="start" x="8" y="-180.5" font-family="Helvetica,sans-Serif" font-size="10.00">+ jira_client</text>
+<polyline fill="none" stroke="black" points="0,-173.5 169,-173.5 "/>
+<text text-anchor="start" x="8" y="-161.5" font-family="Helvetica,sans-Serif" font-size="10.00">+ __init__()</text>
+<text text-anchor="start" x="8" y="-150.5" font-family="Helvetica,sans-Serif" font-size="10.00">+ is_connected()</text>
+<text text-anchor="start" x="8" y="-139.5" font-family="Helvetica,sans-Serif" font-size="10.00">+ extract_issue_keys</text>
+<text text-anchor="start" x="8" y="-128.5" font-family="Helvetica,sans-Serif" font-size="10.00">_from_branch()</text>
+<text text-anchor="start" x="8" y="-117.5" font-family="Helvetica,sans-Serif" font-size="10.00">+ extract_issue_keys()</text>
+<text text-anchor="start" x="8" y="-106.5" font-family="Helvetica,sans-Serif" font-size="10.00">+ get_issue_details()</text>
+<text text-anchor="start" x="8" y="-95.5" font-family="Helvetica,sans-Serif" font-size="10.00">+ add_comment()</text>
+<text text-anchor="start" x="8" y="-84.5" font-family="Helvetica,sans-Serif" font-size="10.00">+ update_issue_status()</text>
+<text text-anchor="start" x="8" y="-73.5" font-family="Helvetica,sans-Serif" font-size="10.00">+ format_commit_message</text>
+<text text-anchor="start" x="8" y="-62.5" font-family="Helvetica,sans-Serif" font-size="10.00">_with_jira_info()</text>
+<text text-anchor="start" x="8" y="-51.5" font-family="Helvetica,sans-Serif" font-size="10.00">+ get_detailed_issue</text>
+<text text-anchor="start" x="8" y="-40.5" font-family="Helvetica,sans-Serif" font-size="10.00">_context()</text>
+<text text-anchor="start" x="8" y="-29.5" font-family="Helvetica,sans-Serif" font-size="10.00">+ get_commit_context</text>
+<text text-anchor="start" x="8" y="-18.5" font-family="Helvetica,sans-Serif" font-size="10.00">_from_issues()</text>
+<text text-anchor="start" x="8" y="-7.5" font-family="Helvetica,sans-Serif" font-size="10.00">+ enhance_commit_message()</text>
+</a>
+</g>
+</g>
+</g>
+</svg>
diff --git a/docs345/docbook/classpenify__hook_1_1jira__client_1_1JiraClient_a00d0f9ae006313a21576362d26ac5ec8_icgraph.md5 b/docs345/docbook/classpenify__hook_1_1jira__client_1_1JiraClient_a00d0f9ae006313a21576362d26ac5ec8_icgraph.md5
new file mode 100644
index 0000000..15413c7
--- /dev/null
+++ b/docs345/docbook/classpenify__hook_1_1jira__client_1_1JiraClient_a00d0f9ae006313a21576362d26ac5ec8_icgraph.md5
@@ -0,0 +1 @@
+e49f7a18c7f7394bc3ba168c4b7dfcbf
\ No newline at end of file
diff --git a/docs345/docbook/classpenify__hook_1_1jira__client_1_1JiraClient_a00d0f9ae006313a21576362d26ac5ec8_icgraph.svg b/docs345/docbook/classpenify__hook_1_1jira__client_1_1JiraClient_a00d0f9ae006313a21576362d26ac5ec8_icgraph.svg
new file mode 100644
index 0000000..dbff1cc
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+++ b/docs345/docbook/classpenify__hook_1_1jira__client_1_1JiraClient_a00d0f9ae006313a21576362d26ac5ec8_icgraph.svg
@@ -0,0 +1,176 @@
+<?xml version="1.0" encoding="UTF-8" standalone="no"?>
+<!DOCTYPE svg PUBLIC "-//W3C//DTD SVG 1.1//EN"
+ "http://www.w3.org/Graphics/SVG/1.1/DTD/svg11.dtd">
+<!-- Generated by graphviz version 2.43.0 (0)
+ -->
+<!-- Title: penify_hook.jira_client.JiraClient.is_connected Pages: 1 -->
+<svg width="683pt" height="342pt"
+ viewBox="0.00 0.00 683.00 341.50" xmlns="http://www.w3.org/2000/svg" xmlns:xlink="http://www.w3.org/1999/xlink">
+<g id="graph0" class="graph" transform="scale(1 1) rotate(0) translate(4 337.5)">
+<title>penify_hook.jira_client.JiraClient.is_connected</title>
+<polygon fill="white" stroke="transparent" points="-4,4 -4,-337.5 679,-337.5 679,4 -4,4"/>
+<!-- Node1 -->
+<g id="node1" class="node">
+<title>Node1</title>
+<g id="a_node1"><a xlink:title=" ">
+<polygon fill="#bfbfbf" stroke="black" points="545,-159 545,-189 675,-189 675,-159 545,-159"/>
+<text text-anchor="start" x="553" y="-177" font-family="Helvetica,sans-Serif" font-size="10.00">penify_hook.jira_client.</text>
+<text text-anchor="middle" x="610" y="-166" font-family="Helvetica,sans-Serif" font-size="10.00">JiraClient.is_connected</text>
+</a>
+</g>
+</g>
+<!-- Node2 -->
+<g id="node2" class="node">
+<title>Node2</title>
+<g id="a_node2"><a xlink:href="$classpenify__hook_1_1jira__client_1_1JiraClient.html#aa1f374116c64cd5f1492ec7f7e40f9c1" xlink:title=" ">
+<polygon fill="white" stroke="black" points="367.5,-285 367.5,-315 501.5,-315 501.5,-285 367.5,-285"/>
+<text text-anchor="start" x="375.5" y="-303" font-family="Helvetica,sans-Serif" font-size="10.00">penify_hook.jira_client.</text>
+<text text-anchor="middle" x="434.5" y="-292" font-family="Helvetica,sans-Serif" font-size="10.00">JiraClient.add_comment</text>
+</a>
+</g>
+</g>
+<!-- Node1&#45;&gt;Node2 -->
+<g id="edge1" class="edge">
+<title>Node1&#45;&gt;Node2</title>
+<path fill="none" stroke="midnightblue" d="M589.9,-196.75C571.1,-217.99 540.67,-249.42 509,-270 500.1,-275.78 489.91,-280.8 480,-284.99"/>
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+<title>Node3</title>
+<g id="a_node3"><a xlink:href="$classpenify__hook_1_1jira__client_1_1JiraClient.html#a70d2c5a6432aa6f238da0ff65d49a760" xlink:title=" ">
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+<text text-anchor="start" x="8" y="-200.5" font-family="Helvetica,sans-Serif" font-size="10.00">JiraClient.enhance_commit</text>
+<text text-anchor="middle" x="74" y="-189.5" font-family="Helvetica,sans-Serif" font-size="10.00">_message</text>
+</a>
+</g>
+</g>
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+<g id="edge3" class="edge">
+<title>Node1&#45;&gt;Node3</title>
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+<!-- Node4 -->
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+<title>Node4</title>
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+<text text-anchor="start" x="192" y="-200.5" font-family="Helvetica,sans-Serif" font-size="10.00">JiraClient.format_commit</text>
+<text text-anchor="middle" x="254" y="-189.5" font-family="Helvetica,sans-Serif" font-size="10.00">_message_with_jira_info</text>
+</a>
+</g>
+</g>
+<!-- Node1&#45;&gt;Node4 -->
+<g id="edge4" class="edge">
+<title>Node1&#45;&gt;Node4</title>
+<path fill="none" stroke="midnightblue" d="M548.57,-191.47C535.62,-194.55 521.94,-197.3 509,-199 446.8,-207.16 375.3,-207.48 324.04,-206.16"/>
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+<!-- Node5 -->
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+<title>Node5</title>
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+<text text-anchor="start" x="197" y="-132.5" font-family="Helvetica,sans-Serif" font-size="10.00">JiraClient.get_commit</text>
+<text text-anchor="middle" x="254" y="-121.5" font-family="Helvetica,sans-Serif" font-size="10.00">_context_from_issues</text>
+</a>
+</g>
+</g>
+<!-- Node1&#45;&gt;Node5 -->
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+<text text-anchor="middle" x="434.5" y="-67.5" font-family="Helvetica,sans-Serif" font-size="10.00">_issue_context</text>
+</a>
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+<!-- Node1&#45;&gt;Node6 -->
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+<title>Node7</title>
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+<text text-anchor="middle" x="434.5" y="-166" font-family="Helvetica,sans-Serif" font-size="10.00">JiraClient.get_issue_details</text>
+</a>
+</g>
+</g>
+<!-- Node1&#45;&gt;Node7 -->
+<g id="edge10" class="edge">
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+<!-- Node8 -->
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+<title>Node8</title>
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+<text text-anchor="start" x="377.5" y="-18.5" font-family="Helvetica,sans-Serif" font-size="10.00">JiraClient.update_issue</text>
+<text text-anchor="middle" x="434.5" y="-7.5" font-family="Helvetica,sans-Serif" font-size="10.00">_status</text>
+</a>
+</g>
+</g>
+<!-- Node1&#45;&gt;Node8 -->
+<g id="edge13" class="edge">
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new file mode 100644
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diff --git a/docs345/docbook/classpenify__hook_1_1jira__client_1_1JiraClient_a093d6456fe053ef7a7862d5d6851910c_icgraph.md5 b/docs345/docbook/classpenify__hook_1_1jira__client_1_1JiraClient_a093d6456fe053ef7a7862d5d6851910c_icgraph.md5
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+<text text-anchor="start" x="8" y="-29.5" font-family="Helvetica,sans-Serif" font-size="10.00">penify_hook.jira_client.</text>
+<text text-anchor="start" x="8" y="-18.5" font-family="Helvetica,sans-Serif" font-size="10.00">JiraClient.extract_issue</text>
+<text text-anchor="middle" x="65" y="-7.5" font-family="Helvetica,sans-Serif" font-size="10.00">_keys_from_branch</text>
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+</g>
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+<!-- Node1&#45;&gt;Node1 -->
+<g id="edge1" class="edge">
+<title>Node1&#45;&gt;Node1</title>
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diff --git a/docs345/docbook/classpenify__hook_1_1jira__client_1_1JiraClient_a49ea1149758f7f5212149d357b13cc23_cgraph.md5 b/docs345/docbook/classpenify__hook_1_1jira__client_1_1JiraClient_a49ea1149758f7f5212149d357b13cc23_cgraph.md5
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+<g id="graph0" class="graph" transform="scale(1 1) rotate(0) translate(4 106)">
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+</a>
+</g>
+</g>
+<!-- Node2 -->
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+<!-- Node1&#45;&gt;Node3 -->
+<g id="edge2" class="edge">
+<title>Node1&#45;&gt;Node3</title>
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diff --git a/docs345/docbook/classpenify__hook_1_1jira__client_1_1JiraClient_a49ea1149758f7f5212149d357b13cc23_icgraph.md5 b/docs345/docbook/classpenify__hook_1_1jira__client_1_1JiraClient_a49ea1149758f7f5212149d357b13cc23_icgraph.md5
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new file mode 100644
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diff --git a/docs345/docbook/classpenify__hook_1_1jira__client_1_1JiraClient_afb41ce6f13c30b1265d439ddf04bf2cd_icgraph.md5 b/docs345/docbook/classpenify__hook_1_1jira__client_1_1JiraClient_afb41ce6f13c30b1265d439ddf04bf2cd_icgraph.md5
new file mode 100644
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diff --git a/docs345/docbook/classpenify__hook_1_1llm__client_1_1LLMClient.xml b/docs345/docbook/classpenify__hook_1_1llm__client_1_1LLMClient.xml
new file mode 100644
index 0000000..487f50e
--- /dev/null
+++ b/docs345/docbook/classpenify__hook_1_1llm__client_1_1LLMClient.xml
@@ -0,0 +1,148 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_classpenify__hook_1_1llm__client_1_1LLMClient" xml:lang="en-US">
+<title>penify_hook.llm_client.LLMClient Class Reference</title>
+<indexterm><primary>penify_hook.llm_client.LLMClient</primary></indexterm>
+Collaboration diagram for penify_hook.llm_client.LLMClient:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1llm__client_1_1LLMClient__coll__graph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+<simplesect>
+    <title>Public Member Functions    </title>
+        <itemizedlist>
+            <listitem><para>def <link linkend="_classpenify__hook_1_1llm__client_1_1LLMClient_1a76d92354f585ab4bb291169f9f530764">__init__</link> (self, str <link linkend="_classpenify__hook_1_1llm__client_1_1LLMClient_1abc2cb6b1d6d9b5dc16401ca078ec8c10">model</link>=None, str api_base=None, str api_key=None)</para>
+</listitem>
+            <listitem><para>def <link linkend="_classpenify__hook_1_1llm__client_1_1LLMClient_1ad6f06658ca922793f879474f2234518e">litellm</link> (self)</para>
+</listitem>
+            <listitem><para>Dict <link linkend="_classpenify__hook_1_1llm__client_1_1LLMClient_1a2ad3014dac466ee1d8e00306d0cf2000">generate_commit_summary</link> (self, str diff, str message, bool generate_description, Dict repo_details, Dict jira_context=None)</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Public Attributes    </title>
+        <itemizedlist>
+            <listitem><para><link linkend="_classpenify__hook_1_1llm__client_1_1LLMClient_1abc2cb6b1d6d9b5dc16401ca078ec8c10">model</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Private Attributes    </title>
+        <itemizedlist>
+            <listitem><para><link linkend="_classpenify__hook_1_1llm__client_1_1LLMClient_1a76c2e9805f805624ab9c55a9f1f8d362">_litellm</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<section>
+<title>Detailed Description</title>
+
+<para><literallayout><computeroutput>Client for interacting with LLM models using LiteLLM.
+</computeroutput></literallayout> </para>
+</section>
+<section>
+<title>Constructor &amp; Destructor Documentation</title>
+<anchor xml:id="_classpenify__hook_1_1llm__client_1_1LLMClient_1a76d92354f585ab4bb291169f9f530764"/><section>
+    <title>__init__()</title>
+<indexterm><primary>__init__</primary><secondary>penify_hook.llm_client.LLMClient</secondary></indexterm>
+<indexterm><primary>penify_hook.llm_client.LLMClient</primary><secondary>__init__</secondary></indexterm>
+<para><computeroutput>def penify_hook.llm_client.LLMClient.__init__ ( self, str  model = <computeroutput>None</computeroutput>
+, str  api_base = <computeroutput>None</computeroutput>
+, str  api_key = <computeroutput>None</computeroutput>
+)</computeroutput></para>
+<para><literallayout><computeroutput>Initialize the LLM client.
+
+Args:
+    model: LLM model to use (e.g., &quot;gpt-4&quot;, &quot;ollama/llama2&quot;, etc.)
+    api_base: Base URL for API requests (e.g., &quot;http://localhost:11434&quot; for Ollama)
+    api_key: API key for the LLM service
+</computeroutput></literallayout> </para>
+</section>
+</section>
+<section>
+<title>Member Function Documentation</title>
+<anchor xml:id="_classpenify__hook_1_1llm__client_1_1LLMClient_1a2ad3014dac466ee1d8e00306d0cf2000"/><section>
+    <title>generate_commit_summary()</title>
+<indexterm><primary>generate_commit_summary</primary><secondary>penify_hook.llm_client.LLMClient</secondary></indexterm>
+<indexterm><primary>penify_hook.llm_client.LLMClient</primary><secondary>generate_commit_summary</secondary></indexterm>
+<para><computeroutput> Dict penify_hook.llm_client.LLMClient.generate_commit_summary ( self, str diff, str message, bool generate_description, Dict repo_details, Dict  jira_context = <computeroutput>None</computeroutput>
+)</computeroutput></para>
+<para><literallayout><computeroutput>Generate a commit summary using the LLM.
+
+This function generates a concise and descriptive commit summary based
+on the provided Git diff, user instructions, repository details, and
+optional JIRA context. It constructs a prompt for the LLM to produce a
+commit title and an optional detailed description, adhering to Semantic
+Commit Messages guidelines. If the JIRA context is provided, it enriches
+the prompt with relevant issue information.
+
+Args:
+    diff (str): Git diff of changes.
+    message (str): User-provided commit message or instructions.
+    generate_description (bool): Flag indicating whether to include a detailed description in the
+        summary.
+    repo_details (Dict): Details about the repository.
+    jira_context (Dict?): Optional JIRA issue context to enhance the summary.
+
+Returns:
+    Dict: A dictionary containing the title and description for the commit. If
+        generate_description is False,
+        the &apos;description&apos; key may be absent.
+
+Raises:
+    ValueError: If the LLM model is not configured.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1llm__client_1_1LLMClient_a2ad3014dac466ee1d8e00306d0cf2000_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1llm__client_1_1LLMClient_a2ad3014dac466ee1d8e00306d0cf2000_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_classpenify__hook_1_1llm__client_1_1LLMClient_1ad6f06658ca922793f879474f2234518e"/><section>
+    <title>litellm()</title>
+<indexterm><primary>litellm</primary><secondary>penify_hook.llm_client.LLMClient</secondary></indexterm>
+<indexterm><primary>penify_hook.llm_client.LLMClient</primary><secondary>litellm</secondary></indexterm>
+<para><computeroutput>def penify_hook.llm_client.LLMClient.litellm ( self)</computeroutput></para>
+<para><literallayout><computeroutput>Lazy load litellm only when needed.</computeroutput></literallayout> </para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1llm__client_1_1LLMClient_ad6f06658ca922793f879474f2234518e_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+</section>
+<section>
+<title>Member Data Documentation</title>
+<anchor xml:id="_classpenify__hook_1_1llm__client_1_1LLMClient_1a76c2e9805f805624ab9c55a9f1f8d362"/><section>
+    <title>_litellm</title>
+<indexterm><primary>_litellm</primary><secondary>penify_hook.llm_client.LLMClient</secondary></indexterm>
+<indexterm><primary>penify_hook.llm_client.LLMClient</primary><secondary>_litellm</secondary></indexterm>
+<para><computeroutput>penify_hook.llm_client.LLMClient._litellm<computeroutput>[private]</computeroutput></computeroutput></para></section>
+<anchor xml:id="_classpenify__hook_1_1llm__client_1_1LLMClient_1abc2cb6b1d6d9b5dc16401ca078ec8c10"/><section>
+    <title>model</title>
+<indexterm><primary>model</primary><secondary>penify_hook.llm_client.LLMClient</secondary></indexterm>
+<indexterm><primary>penify_hook.llm_client.LLMClient</primary><secondary>model</secondary></indexterm>
+<para><computeroutput>penify_hook.llm_client.LLMClient.model</computeroutput></para></section>
+<para>
+The documentation for this class was generated from the following file:</para>
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/<link linkend="_llm__client_8py">llm_client.py</link></section>
+</section>
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diff --git a/docs345/docbook/classpenify__hook_1_1utils_1_1GitRepoNotFoundError.xml b/docs345/docbook/classpenify__hook_1_1utils_1_1GitRepoNotFoundError.xml
new file mode 100644
index 0000000..665b3f0
--- /dev/null
+++ b/docs345/docbook/classpenify__hook_1_1utils_1_1GitRepoNotFoundError.xml
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+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
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+<title>penify_hook.utils.GitRepoNotFoundError Class Reference</title>
+<indexterm><primary>penify_hook.utils.GitRepoNotFoundError</primary></indexterm>
+Inheritance diagram for penify_hook.utils.GitRepoNotFoundError:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1utils_1_1GitRepoNotFoundError__inherit__graph.svg"></imagedata>
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+</para>
+Collaboration diagram for penify_hook.utils.GitRepoNotFoundError:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classpenify__hook_1_1utils_1_1GitRepoNotFoundError__coll__graph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+<para>
+The documentation for this class was generated from the following file:</para>
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/<link linkend="_utils_8py">utils.py</link></section>
diff --git a/docs345/docbook/classpenify__hook_1_1utils_1_1GitRepoNotFoundError__coll__graph.md5 b/docs345/docbook/classpenify__hook_1_1utils_1_1GitRepoNotFoundError__coll__graph.md5
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new file mode 100644
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+<polygon fill="white" stroke="transparent" points="-4,4 -4,-167 146,-167 146,4 -4,4"/>
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+<text text-anchor="middle" x="71" y="-45.5" font-family="Helvetica,sans-Serif" font-size="10.00">NotFoundError</text>
+<polyline fill="none" stroke="black" points="0,-38.5 142,-38.5 "/>
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diff --git a/docs345/docbook/classtests_1_1test__commit__commands_1_1TestCommitCommands.xml b/docs345/docbook/classtests_1_1test__commit__commands_1_1TestCommitCommands.xml
new file mode 100644
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--- /dev/null
+++ b/docs345/docbook/classtests_1_1test__commit__commands_1_1TestCommitCommands.xml
@@ -0,0 +1,342 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_classtests_1_1test__commit__commands_1_1TestCommitCommands" xml:lang="en-US">
+<title>tests.test_commit_commands.TestCommitCommands Class Reference</title>
+<indexterm><primary>tests.test_commit_commands.TestCommitCommands</primary></indexterm>
+Collaboration diagram for tests.test_commit_commands.TestCommitCommands:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classtests_1_1test__commit__commands_1_1TestCommitCommands__coll__graph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+<simplesect>
+    <title>Public Member Functions    </title>
+        <itemizedlist>
+            <listitem><para>def <link linkend="_classtests_1_1test__commit__commands_1_1TestCommitCommands_1abcd2354a2af4afe19e57877628d3acc2">mock_api_client</link> (self)</para>
+</listitem>
+            <listitem><para>def <link linkend="_classtests_1_1test__commit__commands_1_1TestCommitCommands_1a20e78370ff5bd6223cc1dd4323a86ea4">mock_llm_client</link> (self)</para>
+</listitem>
+            <listitem><para>def <link linkend="_classtests_1_1test__commit__commands_1_1TestCommitCommands_1a05adaa9a713ff1be657455d0667bc6be">mock_jira_client</link> (self)</para>
+</listitem>
+            <listitem><para>def <link linkend="_classtests_1_1test__commit__commands_1_1TestCommitCommands_1aa9b25a4bf692b8736164695072a398f6">mock_commit_doc_gen</link> (self)</para>
+</listitem>
+            <listitem><para>def <link linkend="_classtests_1_1test__commit__commands_1_1TestCommitCommands_1a2842f456a8c0f1bf0f4def17c183c04e">mock_git_folder_search</link> (self)</para>
+</listitem>
+            <listitem><para>def <link linkend="_classtests_1_1test__commit__commands_1_1TestCommitCommands_1afafbae3c9aeb0e50a75996256c02c8be">mock_print_functions</link> (self)</para>
+</listitem>
+            <listitem><para>def <link linkend="_classtests_1_1test__commit__commands_1_1TestCommitCommands_1acc4b1e4189792a3f7c11d2a745f479c0">test_commit_code_with_llm_client</link> (self, mock_error, mock_warning, mock_info, <link linkend="_classtests_1_1test__commit__commands_1_1TestCommitCommands_1a2842f456a8c0f1bf0f4def17c183c04e">mock_git_folder_search</link>, mock_doc_gen, <link linkend="_classtests_1_1test__commit__commands_1_1TestCommitCommands_1a20e78370ff5bd6223cc1dd4323a86ea4">mock_llm_client</link>, <link linkend="_classtests_1_1test__commit__commands_1_1TestCommitCommands_1abcd2354a2af4afe19e57877628d3acc2">mock_api_client</link>)</para>
+</listitem>
+            <listitem><para>def <link linkend="_classtests_1_1test__commit__commands_1_1TestCommitCommands_1af9c09013055ec39ddde86b487aefcf8b">test_commit_code_with_jira_client</link> (self, mock_error, mock_warning, mock_info, <link linkend="_classtests_1_1test__commit__commands_1_1TestCommitCommands_1a2842f456a8c0f1bf0f4def17c183c04e">mock_git_folder_search</link>, mock_doc_gen, <link linkend="_classtests_1_1test__commit__commands_1_1TestCommitCommands_1a05adaa9a713ff1be657455d0667bc6be">mock_jira_client</link>, <link linkend="_classtests_1_1test__commit__commands_1_1TestCommitCommands_1a20e78370ff5bd6223cc1dd4323a86ea4">mock_llm_client</link>, <link linkend="_classtests_1_1test__commit__commands_1_1TestCommitCommands_1abcd2354a2af4afe19e57877628d3acc2">mock_api_client</link>)</para>
+</listitem>
+            <listitem><para>def <link linkend="_classtests_1_1test__commit__commands_1_1TestCommitCommands_1acea0d934ee0f2b914b0b893736e8fe4e">test_commit_code_with_jira_connection_failure</link> (self, mock_error, mock_warning, mock_info, <link linkend="_classtests_1_1test__commit__commands_1_1TestCommitCommands_1a2842f456a8c0f1bf0f4def17c183c04e">mock_git_folder_search</link>, mock_doc_gen, <link linkend="_classtests_1_1test__commit__commands_1_1TestCommitCommands_1a05adaa9a713ff1be657455d0667bc6be">mock_jira_client</link>, <link linkend="_classtests_1_1test__commit__commands_1_1TestCommitCommands_1abcd2354a2af4afe19e57877628d3acc2">mock_api_client</link>)</para>
+</listitem>
+            <listitem><para>def <link linkend="_classtests_1_1test__commit__commands_1_1TestCommitCommands_1a43c2ff3707124aa48e8eb581106b8691">test_commit_code_error_handling</link> (self, mock_print, mock_exit, <link linkend="_classtests_1_1test__commit__commands_1_1TestCommitCommands_1a2842f456a8c0f1bf0f4def17c183c04e">mock_git_folder_search</link>, mock_doc_gen, <link linkend="_classtests_1_1test__commit__commands_1_1TestCommitCommands_1abcd2354a2af4afe19e57877628d3acc2">mock_api_client</link>)</para>
+</listitem>
+            <listitem><para>def <link linkend="_classtests_1_1test__commit__commands_1_1TestCommitCommands_1a4d04b125e102190a768f65f1948f15bc">test_setup_commit_parser</link> (self)</para>
+</listitem>
+            <listitem><para>def <link linkend="_classtests_1_1test__commit__commands_1_1TestCommitCommands_1ac13e368262340af98b30fd8ebdac6597">test_handle_commit</link> (self, mock_print_info, mock_commit_code, mock_get_token, mock_get_llm_config, mock_get_jira_config)</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<section>
+<title>Member Function Documentation</title>
+<anchor xml:id="_classtests_1_1test__commit__commands_1_1TestCommitCommands_1abcd2354a2af4afe19e57877628d3acc2"/><section>
+    <title>mock_api_client()</title>
+<indexterm><primary>mock_api_client</primary><secondary>tests.test_commit_commands.TestCommitCommands</secondary></indexterm>
+<indexterm><primary>tests.test_commit_commands.TestCommitCommands</primary><secondary>mock_api_client</secondary></indexterm>
+<para><computeroutput>def tests.test_commit_commands.TestCommitCommands.mock_api_client ( self)</computeroutput></para>
+<para><literallayout><computeroutput>Mocks an instance of APIClient using unittest.mock.
+
+This function creates a mock object for APIClient and yields it along
+with the mocked instance. It is useful for testing purposes where real
+API calls should be avoided.
+
+Yields:
+    tuple: A tuple containing the mock of APIClient and the mocked instance of
+        APIClient.
+</computeroutput></literallayout> </para>
+</section>
+<anchor xml:id="_classtests_1_1test__commit__commands_1_1TestCommitCommands_1aa9b25a4bf692b8736164695072a398f6"/><section>
+    <title>mock_commit_doc_gen()</title>
+<indexterm><primary>mock_commit_doc_gen</primary><secondary>tests.test_commit_commands.TestCommitCommands</secondary></indexterm>
+<indexterm><primary>tests.test_commit_commands.TestCommitCommands</primary><secondary>mock_commit_doc_gen</secondary></indexterm>
+<para><computeroutput>def tests.test_commit_commands.TestCommitCommands.mock_commit_doc_gen ( self)</computeroutput></para>
+<para><literallayout><computeroutput>Mocks the CommitDocGenHook class and returns a MagicMock instance.
+
+This function uses the `patch` decorator from the `unittest.mock` module
+to create a mock of the `CommitDocGenHook` class. It then sets up this
+mock to return a new `MagicMock` instance when invoked. The function
+yields both the mock object and the mocked instance, allowing for easy
+testing of functions that rely on `CommitDocGenHook`.
+
+Returns:
+    tuple: A tuple containing two elements:
+        - mock (patch): The patch object used to mock the `CommitDocGenHook`
+        class.
+        - doc_gen_instance (MagicMock): The mocked instance of
+        `CommitDocGenHook`.
+</computeroutput></literallayout> </para>
+</section>
+<anchor xml:id="_classtests_1_1test__commit__commands_1_1TestCommitCommands_1a2842f456a8c0f1bf0f4def17c183c04e"/><section>
+    <title>mock_git_folder_search()</title>
+<indexterm><primary>mock_git_folder_search</primary><secondary>tests.test_commit_commands.TestCommitCommands</secondary></indexterm>
+<indexterm><primary>tests.test_commit_commands.TestCommitCommands</primary><secondary>mock_git_folder_search</secondary></indexterm>
+<para><computeroutput>def tests.test_commit_commands.TestCommitCommands.mock_git_folder_search ( self)</computeroutput></para>
+<para><literallayout><computeroutput>Mock the `recursive_search_git_folder` function to return a predefined
+git folder path.
+
+This function uses the `patch` decorator from the `unittest.mock` module
+to intercept calls to `penify_hook.utils.recursive_search_git_folder`.
+When called, it will return &apos;/mock/git/folder&apos; instead of performing an
+actual search. This is useful for testing purposes where you need a
+consistent response without interacting with the file system.
+
+Yields:
+    MagicMock: A mock object that simulates the `recursive_search_git_folder` function.
+</computeroutput></literallayout> </para>
+</section>
+<anchor xml:id="_classtests_1_1test__commit__commands_1_1TestCommitCommands_1a05adaa9a713ff1be657455d0667bc6be"/><section>
+    <title>mock_jira_client()</title>
+<indexterm><primary>mock_jira_client</primary><secondary>tests.test_commit_commands.TestCommitCommands</secondary></indexterm>
+<indexterm><primary>tests.test_commit_commands.TestCommitCommands</primary><secondary>mock_jira_client</secondary></indexterm>
+<para><computeroutput>def tests.test_commit_commands.TestCommitCommands.mock_jira_client ( self)</computeroutput></para>
+<para><literallayout><computeroutput>Create a mock JIRA client for testing purposes.
+
+This function yields a tuple containing a mock JIRA client instance and
+its `is_connected` method. The mock client is configured to simulate an
+active connection. This is useful for unit tests that require
+interaction with a JIRA client without making actual network calls.
+
+Yields:
+    tuple: A tuple containing the mocked JIRA client instance and its
+        `is_connected` method.
+</computeroutput></literallayout> </para>
+</section>
+<anchor xml:id="_classtests_1_1test__commit__commands_1_1TestCommitCommands_1a20e78370ff5bd6223cc1dd4323a86ea4"/><section>
+    <title>mock_llm_client()</title>
+<indexterm><primary>mock_llm_client</primary><secondary>tests.test_commit_commands.TestCommitCommands</secondary></indexterm>
+<indexterm><primary>tests.test_commit_commands.TestCommitCommands</primary><secondary>mock_llm_client</secondary></indexterm>
+<para><computeroutput>def tests.test_commit_commands.TestCommitCommands.mock_llm_client ( self)</computeroutput></para>
+<para><literallayout><computeroutput>Mock an instance of LLMClient for testing purposes.
+
+This function yields a mock object representing an instance of
+LLMClient, which can be used to simulate interactions with a language
+model during testing. The mock is patched to replace the actual
+LLMClient class from the penify_hook module.
+
+Yields:
+    tuple: A tuple containing two elements:
+        - mock (MagicMock): The mock object for LLMClient.
+        - llm_client_instance (MagicMock): An instance of the mocked LLMClient.
+</computeroutput></literallayout> </para>
+</section>
+<anchor xml:id="_classtests_1_1test__commit__commands_1_1TestCommitCommands_1afafbae3c9aeb0e50a75996256c02c8be"/><section>
+    <title>mock_print_functions()</title>
+<indexterm><primary>mock_print_functions</primary><secondary>tests.test_commit_commands.TestCommitCommands</secondary></indexterm>
+<indexterm><primary>tests.test_commit_commands.TestCommitCommands</primary><secondary>mock_print_functions</secondary></indexterm>
+<para><computeroutput>def tests.test_commit_commands.TestCommitCommands.mock_print_functions ( self)</computeroutput></para>
+<para><literallayout><computeroutput>Mocks the print functions from `penify_hook.ui_utils` for testing
+purposes.
+
+This function uses Python&apos;s `unittest.mock.patch` to replace the actual
+print functions (`print`, `print_warning`, and `print_error`) with mock
+objects. These mock objects can be used in tests to capture calls made
+to these print functions without actually printing anything.
+
+Yields:
+    tuple: A tuple containing three mock objects corresponding to `print_info`,
+        `print_warning`,
+        and `print_error`.
+</computeroutput></literallayout> </para>
+</section>
+<anchor xml:id="_classtests_1_1test__commit__commands_1_1TestCommitCommands_1a43c2ff3707124aa48e8eb581106b8691"/><section>
+    <title>test_commit_code_error_handling()</title>
+<indexterm><primary>test_commit_code_error_handling</primary><secondary>tests.test_commit_commands.TestCommitCommands</secondary></indexterm>
+<indexterm><primary>tests.test_commit_commands.TestCommitCommands</primary><secondary>test_commit_code_error_handling</secondary></indexterm>
+<para><computeroutput>def tests.test_commit_commands.TestCommitCommands.test_commit_code_error_handling ( self,  mock_print,  mock_exit,  mock_git_folder_search,  mock_doc_gen,  mock_api_client)</computeroutput></para>
+<para><literallayout><computeroutput>Test the error handling in the test_commit_code function.
+
+This function sets up mocks to simulate exceptions and test the error
+handling of the commit_code function. It verifies that the function
+correctly prints an error message and exits with a status code of 1 when
+an exception occurs during documentation generation.
+
+Args:
+    mock_print (MagicMock): Mock for the print function, used to verify error message output.
+    mock_exit (MagicMock): Mock for the sys.exit function, used to verify exit behavior.
+    mock_git_folder_search (MagicMock): Mock for the git_folder_search function, returning a mock Git folder
+        path.
+    mock_doc_gen (MagicMock): Mock for the doc_gen function, simulating an exception during
+        documentation generation.
+    mock_api_client (MagicMock): Mock for the API client class, not directly used but referenced in the
+        function signature.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classtests_1_1test__commit__commands_1_1TestCommitCommands_a43c2ff3707124aa48e8eb581106b8691_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_classtests_1_1test__commit__commands_1_1TestCommitCommands_1af9c09013055ec39ddde86b487aefcf8b"/><section>
+    <title>test_commit_code_with_jira_client()</title>
+<indexterm><primary>test_commit_code_with_jira_client</primary><secondary>tests.test_commit_commands.TestCommitCommands</secondary></indexterm>
+<indexterm><primary>tests.test_commit_commands.TestCommitCommands</primary><secondary>test_commit_code_with_jira_client</secondary></indexterm>
+<para><computeroutput>def tests.test_commit_commands.TestCommitCommands.test_commit_code_with_jira_client ( self,  mock_error,  mock_warning,  mock_info,  mock_git_folder_search,  mock_doc_gen,  mock_jira_client,  mock_llm_client,  mock_api_client)</computeroutput></para>
+<para><literallayout><computeroutput>Test committing code using a JIRA client.
+
+This function tests the commit_code function with various parameters,
+including API and JIRA credentials. It sets up mock objects for
+dependencies such as the JIRA client, LLM client, and doc generator to
+simulate the behavior of the real classes. The function then calls
+commit_code and verifies that the JIRA client and doc generator are
+called with the correct parameters.
+
+Args:
+    mock_error (MagicMock): A MagicMock object for simulating error logging.
+    mock_warning (MagicMock): A MagicMock object for simulating warning logging.
+    mock_info (MagicMock): A MagicMock object for simulating info logging.
+    mock_git_folder_search (MagicMock): A MagicMock object for simulating the git folder search function.
+    mock_doc_gen (MagicMock): A MagicMock object for simulating the doc generator function.
+    mock_jira_client (MagicMock): A MagicMock object for simulating the JIRA client class.
+    mock_llm_client (MagicMock): A MagicMock object for simulating the LLM client class.
+    mock_api_client (MagicMock): A MagicMock object for simulating the API client class.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classtests_1_1test__commit__commands_1_1TestCommitCommands_af9c09013055ec39ddde86b487aefcf8b_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_classtests_1_1test__commit__commands_1_1TestCommitCommands_1acea0d934ee0f2b914b0b893736e8fe4e"/><section>
+    <title>test_commit_code_with_jira_connection_failure()</title>
+<indexterm><primary>test_commit_code_with_jira_connection_failure</primary><secondary>tests.test_commit_commands.TestCommitCommands</secondary></indexterm>
+<indexterm><primary>tests.test_commit_commands.TestCommitCommands</primary><secondary>test_commit_code_with_jira_connection_failure</secondary></indexterm>
+<para><computeroutput>def tests.test_commit_commands.TestCommitCommands.test_commit_code_with_jira_connection_failure ( self,  mock_error,  mock_warning,  mock_info,  mock_git_folder_search,  mock_doc_gen,  mock_jira_client,  mock_api_client)</computeroutput></para>
+<para><literallayout><computeroutput>Test the commit_code function when JIRA connection fails.
+
+This function tests the scenario where the JIRA connection fails during
+a code commit. It sets up various mocks to simulate different components
+of the system and then calls the `commit_code` function with specific
+parameters. The function is expected to handle the JIRA connection
+failure gracefully by logging an appropriate warning.
+
+Args:
+    mock_error (MagicMock): Mock for error logging.
+    mock_warning (MagicMock): Mock for warning logging.
+    mock_info (MagicMock): Mock for info logging.
+    mock_git_folder_search (MagicMock): Mock for searching the Git folder.
+    mock_doc_gen (MagicMock): Mock for generating documentation.
+    mock_jira_client (MagicMock): Mock for creating a JIRA client.
+    mock_api_client (MagicMock): Mock for creating an API client.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classtests_1_1test__commit__commands_1_1TestCommitCommands_acea0d934ee0f2b914b0b893736e8fe4e_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_classtests_1_1test__commit__commands_1_1TestCommitCommands_1acc4b1e4189792a3f7c11d2a745f479c0"/><section>
+    <title>test_commit_code_with_llm_client()</title>
+<indexterm><primary>test_commit_code_with_llm_client</primary><secondary>tests.test_commit_commands.TestCommitCommands</secondary></indexterm>
+<indexterm><primary>tests.test_commit_commands.TestCommitCommands</primary><secondary>test_commit_code_with_llm_client</secondary></indexterm>
+<para><computeroutput>def tests.test_commit_commands.TestCommitCommands.test_commit_code_with_llm_client ( self,  mock_error,  mock_warning,  mock_info,  mock_git_folder_search,  mock_doc_gen,  mock_llm_client,  mock_api_client)</computeroutput></para>
+<para><literallayout><computeroutput>Test committing code using an LLM client.
+
+This function sets up mock objects for various components and then calls
+the `commit_code` function with specified parameters. It verifies that
+the correct mocks are created and called with the appropriate arguments.
+
+Args:
+    mock_error (MagicMock): Mock object for error handling.
+    mock_warning (MagicMock): Mock object for warning logging.
+    mock_info (MagicMock): Mock object for info logging.
+    mock_git_folder_search (MagicMock): Mock object to simulate git folder search.
+    mock_doc_gen (MagicMock): Mock object for document generation.
+    mock_llm_client (MagicMock): Mock object for LLM client interaction.
+    mock_api_client (MagicMock): Mock object for API client interaction.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classtests_1_1test__commit__commands_1_1TestCommitCommands_acc4b1e4189792a3f7c11d2a745f479c0_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_classtests_1_1test__commit__commands_1_1TestCommitCommands_1ac13e368262340af98b30fd8ebdac6597"/><section>
+    <title>test_handle_commit()</title>
+<indexterm><primary>test_handle_commit</primary><secondary>tests.test_commit_commands.TestCommitCommands</secondary></indexterm>
+<indexterm><primary>tests.test_commit_commands.TestCommitCommands</primary><secondary>test_handle_commit</secondary></indexterm>
+<para><computeroutput>def tests.test_commit_commands.TestCommitCommands.test_handle_commit ( self,  mock_print_info,  mock_commit_code,  mock_get_token,  mock_get_llm_config,  mock_get_jira_config)</computeroutput></para>
+<para><literallayout><computeroutput>Test the handle_commit function with various mock objects.
+
+This function sets up mocks for retrieving LLM configuration, JIRA
+configuration, and commit code. It then creates an argument object and
+calls the handle_commit function. Finally, it verifies that the mock
+functions were called with the expected arguments.
+
+Args:
+    mock_print_info (MagicMock): Mock object for printing information.
+    mock_commit_code (MagicMock): Mock object for committing code.
+    mock_get_token (MagicMock): Mock object for retrieving API token.
+    mock_get_llm_config (MagicMock): Mock object for retrieving LLM configuration.
+    mock_get_jira_config (MagicMock): Mock object for retrieving JIRA configuration.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classtests_1_1test__commit__commands_1_1TestCommitCommands_ac13e368262340af98b30fd8ebdac6597_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_classtests_1_1test__commit__commands_1_1TestCommitCommands_1a4d04b125e102190a768f65f1948f15bc"/><section>
+    <title>test_setup_commit_parser()</title>
+<indexterm><primary>test_setup_commit_parser</primary><secondary>tests.test_commit_commands.TestCommitCommands</secondary></indexterm>
+<indexterm><primary>tests.test_commit_commands.TestCommitCommands</primary><secondary>test_setup_commit_parser</secondary></indexterm>
+<para><computeroutput>def tests.test_commit_commands.TestCommitCommands.test_setup_commit_parser ( self)</computeroutput></para>
+<para><literallayout><computeroutput>Set up the argument parser for the commit command.
+
+This function configures an argument parser to handle various options
+for committing changes. It adds three arguments: - &apos;-m&apos; or &apos;--message&apos;:
+An optional argument to specify a contextual commit message with a
+default value of &quot;N/A&quot;. - &apos;-e&apos; or &apos;--terminal&apos;: A boolean flag to open
+an edit terminal before committing. - &apos;-d&apos; or &apos;--description&apos;: A boolean
+flag that, when set to False, indicates the generation of a commit
+message with title and description.
+
+Args:
+    parser (MagicMock): The argument parser to be configured.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classtests_1_1test__commit__commands_1_1TestCommitCommands_a4d04b125e102190a768f65f1948f15bc_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<para>
+The documentation for this class was generated from the following file:</para>
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/<link linkend="_test__commit__commands_8py">test_commit_commands.py</link></section>
+</section>
diff --git a/docs345/docbook/classtests_1_1test__commit__commands_1_1TestCommitCommands__coll__graph.md5 b/docs345/docbook/classtests_1_1test__commit__commands_1_1TestCommitCommands__coll__graph.md5
new file mode 100644
index 0000000..9d383d8
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+<text text-anchor="start" x="8" y="-106.5" font-family="Helvetica,sans-Serif" font-size="10.00">+ test_commit_code_with</text>
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+<text text-anchor="start" x="8" y="-18.5" font-family="Helvetica,sans-Serif" font-size="10.00">+ test_setup_commit_parser()</text>
+<text text-anchor="start" x="8" y="-7.5" font-family="Helvetica,sans-Serif" font-size="10.00">+ test_handle_commit()</text>
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diff --git a/docs345/docbook/classtests_1_1test__commit__commands_1_1TestCommitCommands_a43c2ff3707124aa48e8eb581106b8691_cgraph.md5 b/docs345/docbook/classtests_1_1test__commit__commands_1_1TestCommitCommands_a43c2ff3707124aa48e8eb581106b8691_cgraph.md5
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diff --git a/docs345/docbook/classtests_1_1test__commit__commands_1_1TestCommitCommands_a4d04b125e102190a768f65f1948f15bc_cgraph.md5 b/docs345/docbook/classtests_1_1test__commit__commands_1_1TestCommitCommands_a4d04b125e102190a768f65f1948f15bc_cgraph.md5
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diff --git a/docs345/docbook/classtests_1_1test__config__commands_1_1TestConfigCommands.xml b/docs345/docbook/classtests_1_1test__config__commands_1_1TestConfigCommands.xml
new file mode 100644
index 0000000..877711c
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+++ b/docs345/docbook/classtests_1_1test__config__commands_1_1TestConfigCommands.xml
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+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
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+<title>tests.test_config_commands.TestConfigCommands Class Reference</title>
+<indexterm><primary>tests.test_config_commands.TestConfigCommands</primary></indexterm>
+Collaboration diagram for tests.test_config_commands.TestConfigCommands:<para>
+    <informalfigure>
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+<simplesect>
+    <title>Public Member Functions    </title>
+        <itemizedlist>
+            <listitem><para>def <link linkend="_classtests_1_1test__config__commands_1_1TestConfigCommands_1a2e8162082bcdd5652bb37bdb14cf453a">test_get_penify_config_existing_dir</link> (self, mock_file_open, mock_makedirs, mock_path, mock_git_folder)</para>
+</listitem>
+            <listitem><para>def <link linkend="_classtests_1_1test__config__commands_1_1TestConfigCommands_1a33d4760eee3b67e1cde3aed755ebb948">test_get_penify_config_new_dir</link> (self, mock_file_open, mock_makedirs, mock_path, mock_git_folder)</para>
+</listitem>
+            <listitem><para>def <link linkend="_classtests_1_1test__config__commands_1_1TestConfigCommands_1adf9f2233a3f4cc5725b9d4f05758b167">test_get_llm_config_exists</link> (self, mock_file_open, mock_get_config)</para>
+</listitem>
+            <listitem><para>def <link linkend="_classtests_1_1test__config__commands_1_1TestConfigCommands_1abd12f028b89aa9cd1152c0b9ece5d3cd">test_get_llm_config_empty</link> (self, mock_file_open, mock_get_config)</para>
+</listitem>
+            <listitem><para>def <link linkend="_classtests_1_1test__config__commands_1_1TestConfigCommands_1a473984d31452b56acd6ce4011a1248bd">test_get_llm_config_invalid_json</link> (self, mock_print, mock_file_open, mock_get_config)</para>
+</listitem>
+            <listitem><para>def <link linkend="_classtests_1_1test__config__commands_1_1TestConfigCommands_1aee37b97432821d19758c6325d4c74bcf">test_get_jira_config_exists</link> (self, mock_file_open, mock_get_config)</para>
+</listitem>
+            <listitem><para>def <link linkend="_classtests_1_1test__config__commands_1_1TestConfigCommands_1acd8df8219441b9e9871b903a681400d9">test_save_llm_config_success</link> (self, mock_print, mock_json_dump, mock_file_open, mock_get_config)</para>
+</listitem>
+            <listitem><para>def <link linkend="_classtests_1_1test__config__commands_1_1TestConfigCommands_1a73a264dfb21e16003e095b79f6eab2ac">test_save_llm_config_failure</link> (self, mock_print, mock_file_open, mock_get_config)</para>
+</listitem>
+            <listitem><para>def <link linkend="_classtests_1_1test__config__commands_1_1TestConfigCommands_1af8d62310da2d768e21770f8f01ff5375">test_save_jira_config_success</link> (self, mock_print, mock_json_dump, mock_file_open, mock_path)</para>
+</listitem>
+            <listitem><para>def <link linkend="_classtests_1_1test__config__commands_1_1TestConfigCommands_1a3355f7d313bebaa71694387cf2bc5232">test_get_token_from_env</link> (self, mock_file_open, mock_path, mock_getenv)</para>
+</listitem>
+            <listitem><para>def <link linkend="_classtests_1_1test__config__commands_1_1TestConfigCommands_1a6c0207be563c3de59a6d16277805114c">test_get_token_from_config</link> (self, mock_file_open, mock_path, mock_getenv)</para>
+</listitem>
+            <listitem><para>def <link linkend="_classtests_1_1test__config__commands_1_1TestConfigCommands_1a400ca5d9fcdc159714e8df54920f9436">test_get_token_not_found</link> (self, mock_file_open, mock_path, mock_getenv)</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<section>
+<title>Member Function Documentation</title>
+<anchor xml:id="_classtests_1_1test__config__commands_1_1TestConfigCommands_1aee37b97432821d19758c6325d4c74bcf"/><section>
+    <title>test_get_jira_config_exists()</title>
+<indexterm><primary>test_get_jira_config_exists</primary><secondary>tests.test_config_commands.TestConfigCommands</secondary></indexterm>
+<indexterm><primary>tests.test_config_commands.TestConfigCommands</primary><secondary>test_get_jira_config_exists</secondary></indexterm>
+<para><computeroutput>def tests.test_config_commands.TestConfigCommands.test_get_jira_config_exists ( self,  mock_file_open,  mock_get_config)</computeroutput></para>
+<para><literallayout><computeroutput>Test that get_jira_config returns the correct JIRA configuration when
+the configuration file exists.
+
+It sets up a mock for the configuration file to simulate its existence
+and verifies that the function reads from the correct file and returns
+the expected JIRA configuration dictionary. Additionally, it checks that
+the mock file open is called with the appropriate arguments.
+
+Args:
+    mock_file_open (MagicMock): A mock for the `open` function.
+    mock_get_config (MagicMock): A mock for the `get_config` function, which is expected to return a mock
+        configuration file object.
+
+Returns:
+    None: This test function does not explicitly return anything. Its assertions
+        serve as the verification of its correctness.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classtests_1_1test__config__commands_1_1TestConfigCommands_aee37b97432821d19758c6325d4c74bcf_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_classtests_1_1test__config__commands_1_1TestConfigCommands_1abd12f028b89aa9cd1152c0b9ece5d3cd"/><section>
+    <title>test_get_llm_config_empty()</title>
+<indexterm><primary>test_get_llm_config_empty</primary><secondary>tests.test_config_commands.TestConfigCommands</secondary></indexterm>
+<indexterm><primary>tests.test_config_commands.TestConfigCommands</primary><secondary>test_get_llm_config_empty</secondary></indexterm>
+<para><computeroutput>def tests.test_config_commands.TestConfigCommands.test_get_llm_config_empty ( self,  mock_file_open,  mock_get_config)</computeroutput></para>
+<para><literallayout><computeroutput>Test the behavior of get_llm_config when called with an empty
+configuration file.
+
+This function sets up a mock configuration file that exists but returns
+no content. It then calls the `get_llm_config` function and asserts that
+it returns an empty dictionary and that the file open method was called
+exactly once with the correct arguments.
+
+Args:
+    mock_file_open (MagicMock): A MagicMock object simulating the built-in open function.
+    mock_get_config (MagicMock): A MagicMock object simulating the get_config function.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classtests_1_1test__config__commands_1_1TestConfigCommands_abd12f028b89aa9cd1152c0b9ece5d3cd_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_classtests_1_1test__config__commands_1_1TestConfigCommands_1adf9f2233a3f4cc5725b9d4f05758b167"/><section>
+    <title>test_get_llm_config_exists()</title>
+<indexterm><primary>test_get_llm_config_exists</primary><secondary>tests.test_config_commands.TestConfigCommands</secondary></indexterm>
+<indexterm><primary>tests.test_config_commands.TestConfigCommands</primary><secondary>test_get_llm_config_exists</secondary></indexterm>
+<para><computeroutput>def tests.test_config_commands.TestConfigCommands.test_get_llm_config_exists ( self,  mock_file_open,  mock_get_config)</computeroutput></para>
+<para><literallayout><computeroutput>Test the get_llm_config function when the configuration file exists.
+
+This function sets up a mock configuration file that exists and returns
+it when called. It then calls the get_llm_config function and asserts
+that it returns the correct configuration dictionary. Additionally, it
+checks that the mock_file_open function was called with the correct
+arguments.
+
+Args:
+    mock_file_open (MagicMock): A mock for the open() function.
+    mock_get_config (MagicMock): A mock for the get_config() function.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classtests_1_1test__config__commands_1_1TestConfigCommands_adf9f2233a3f4cc5725b9d4f05758b167_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_classtests_1_1test__config__commands_1_1TestConfigCommands_1a473984d31452b56acd6ce4011a1248bd"/><section>
+    <title>test_get_llm_config_invalid_json()</title>
+<indexterm><primary>test_get_llm_config_invalid_json</primary><secondary>tests.test_config_commands.TestConfigCommands</secondary></indexterm>
+<indexterm><primary>tests.test_config_commands.TestConfigCommands</primary><secondary>test_get_llm_config_invalid_json</secondary></indexterm>
+<para><computeroutput>def tests.test_config_commands.TestConfigCommands.test_get_llm_config_invalid_json ( self,  mock_print,  mock_file_open,  mock_get_config)</computeroutput></para>
+<para><literallayout><computeroutput>Test function to verify the behavior of get_llm_config when reading an
+invalid JSON file.
+
+It sets up a mock configuration file that exists but contains invalid
+JSON. The function is expected to handle this gracefully by printing an
+error message and returning an empty dictionary.
+
+Args:
+    mock_print (MagicMock): Mock for the print function.
+    mock_file_open (MagicMock): Mock for the open function.
+    mock_get_config (MagicMock): Mock for the get_config function, which returns the mock configuration
+        file.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classtests_1_1test__config__commands_1_1TestConfigCommands_a473984d31452b56acd6ce4011a1248bd_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_classtests_1_1test__config__commands_1_1TestConfigCommands_1a2e8162082bcdd5652bb37bdb14cf453a"/><section>
+    <title>test_get_penify_config_existing_dir()</title>
+<indexterm><primary>test_get_penify_config_existing_dir</primary><secondary>tests.test_config_commands.TestConfigCommands</secondary></indexterm>
+<indexterm><primary>tests.test_config_commands.TestConfigCommands</primary><secondary>test_get_penify_config_existing_dir</secondary></indexterm>
+<para><computeroutput>def tests.test_config_commands.TestConfigCommands.test_get_penify_config_existing_dir ( self,  mock_file_open,  mock_makedirs,  mock_path,  mock_git_folder)</computeroutput></para>
+<para><literallayout><computeroutput>Test the get_penify_config function when the .penify config directory
+exists.
+
+It should not create a new directory and assert that all mocked
+functions were called correctly.
+
+Args:
+    mock_file_open (MagicMock): A MagicMock object simulating the open() function.
+    mock_makedirs (MagicMock): A MagicMock object simulating the os.makedirs() function.
+    mock_path (MagicMock): A MagicMock object simulating the Path class from pathlib module.
+    mock_git_folder (MagicMock): A MagicMock object simulating the git_folder_search() function.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classtests_1_1test__config__commands_1_1TestConfigCommands_a2e8162082bcdd5652bb37bdb14cf453a_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_classtests_1_1test__config__commands_1_1TestConfigCommands_1a33d4760eee3b67e1cde3aed755ebb948"/><section>
+    <title>test_get_penify_config_new_dir()</title>
+<indexterm><primary>test_get_penify_config_new_dir</primary><secondary>tests.test_config_commands.TestConfigCommands</secondary></indexterm>
+<indexterm><primary>tests.test_config_commands.TestConfigCommands</primary><secondary>test_get_penify_config_new_dir</secondary></indexterm>
+<para><computeroutput>def tests.test_config_commands.TestConfigCommands.test_get_penify_config_new_dir ( self,  mock_file_open,  mock_makedirs,  mock_path,  mock_git_folder)</computeroutput></para>
+<para><literallayout><computeroutput>Test the behavior of get_penify_config when the .penify directory does
+not exist.
+
+This function mocks various system calls to simulate a scenario where
+the .penify directory is not present. It then asserts that the
+appropriate actions are taken to create the directory and write an empty
+JSON file.
+
+Args:
+    mock_file_open (MagicMock): A MagicMock object simulating the `open` function.
+    mock_makedirs (MagicMock): A MagicMock object simulating the `os.makedirs` function.
+    mock_path (MagicMock): A MagicMock object simulating the `Path` class from `pathlib`.
+    mock_git_folder (MagicMock): A MagicMock object simulating a git folder search function.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classtests_1_1test__config__commands_1_1TestConfigCommands_a33d4760eee3b67e1cde3aed755ebb948_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_classtests_1_1test__config__commands_1_1TestConfigCommands_1a6c0207be563c3de59a6d16277805114c"/><section>
+    <title>test_get_token_from_config()</title>
+<indexterm><primary>test_get_token_from_config</primary><secondary>tests.test_config_commands.TestConfigCommands</secondary></indexterm>
+<indexterm><primary>tests.test_config_commands.TestConfigCommands</primary><secondary>test_get_token_from_config</secondary></indexterm>
+<para><computeroutput>def tests.test_config_commands.TestConfigCommands.test_get_token_from_config ( self,  mock_file_open,  mock_path,  mock_getenv)</computeroutput></para>
+<para><literallayout><computeroutput>Test retrieving a token from the configuration.
+
+This function sets up mocks for environment variables and configuration
+files, calls the `get_token` function, and asserts its behavior. It
+verifies that when the environment variable is not found, the function
+reads a token from a configuration file located in the user&apos;s home
+directory.
+
+Args:
+    mock_file_open (MagicMock): A mock for the `open` function.
+    mock_path (MagicMock): A mock for the `pathlib.Path` class.
+    mock_getenv (MagicMock): A mock for the `os.getenv` function.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classtests_1_1test__config__commands_1_1TestConfigCommands_a6c0207be563c3de59a6d16277805114c_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_classtests_1_1test__config__commands_1_1TestConfigCommands_1a3355f7d313bebaa71694387cf2bc5232"/><section>
+    <title>test_get_token_from_env()</title>
+<indexterm><primary>test_get_token_from_env</primary><secondary>tests.test_config_commands.TestConfigCommands</secondary></indexterm>
+<indexterm><primary>tests.test_config_commands.TestConfigCommands</primary><secondary>test_get_token_from_env</secondary></indexterm>
+<para><computeroutput>def tests.test_config_commands.TestConfigCommands.test_get_token_from_env ( self,  mock_file_open,  mock_path,  mock_getenv)</computeroutput></para>
+<para><literallayout><computeroutput>Test retrieving a token from the environment variable.
+
+This function tests the behavior of `get_token` when an environment
+variable is set. It verifies that if the &apos;PENIFY_API_TOKEN&apos; environment
+variable exists, the function returns its value without attempting to
+read a file.
+
+Args:
+    mock_file_open (MagicMock): A MagicMock object for simulating file operations.
+    mock_path (MagicMock): A MagicMock object for simulating path operations.
+    mock_getenv (MagicMock): A MagicMock object for simulating environment variable retrieval.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classtests_1_1test__config__commands_1_1TestConfigCommands_a3355f7d313bebaa71694387cf2bc5232_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_classtests_1_1test__config__commands_1_1TestConfigCommands_1a400ca5d9fcdc159714e8df54920f9436"/><section>
+    <title>test_get_token_not_found()</title>
+<indexterm><primary>test_get_token_not_found</primary><secondary>tests.test_config_commands.TestConfigCommands</secondary></indexterm>
+<indexterm><primary>tests.test_config_commands.TestConfigCommands</primary><secondary>test_get_token_not_found</secondary></indexterm>
+<para><computeroutput>def tests.test_config_commands.TestConfigCommands.test_get_token_not_found ( self,  mock_file_open,  mock_path,  mock_getenv)</computeroutput></para>
+<para><literallayout><computeroutput>Test the get_token function when the API token environment variable is
+not found.
+
+This function tests the scenario where the `PENIFY_API_TOKEN`
+environment variable is not set. It mocks the environment variable to
+return `None`, and verifies that the function returns `None`. The test
+also checks that the environment variable is accessed once and that a
+file open operation is attempted on a configuration file located in the
+user&apos;s home directory.
+
+Args:
+    mock_file_open (MagicMock): Mock for the built-in `open` function.
+    mock_path (MagicMock): Mock for the `pathlib.Path` module.
+    mock_getenv (MagicMock): Mock for the `os.getenv` function.
+
+Returns:
+    None: The function does not return anything; it asserts conditions to verify
+        correctness.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classtests_1_1test__config__commands_1_1TestConfigCommands_a400ca5d9fcdc159714e8df54920f9436_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_classtests_1_1test__config__commands_1_1TestConfigCommands_1af8d62310da2d768e21770f8f01ff5375"/><section>
+    <title>test_save_jira_config_success()</title>
+<indexterm><primary>test_save_jira_config_success</primary><secondary>tests.test_config_commands.TestConfigCommands</secondary></indexterm>
+<indexterm><primary>tests.test_config_commands.TestConfigCommands</primary><secondary>test_save_jira_config_success</secondary></indexterm>
+<para><computeroutput>def tests.test_config_commands.TestConfigCommands.test_save_jira_config_success ( self,  mock_print,  mock_json_dump,  mock_file_open,  mock_path)</computeroutput></para>
+<para><literallayout><computeroutput>Test the save_jira_config function to ensure it saves JIRA configuration
+successfully.
+
+This function sets up mocks for various dependencies and tests the
+functionality of saving a JIRA configuration. It asserts that the
+function returns `True`, the JSON dump is called with the correct
+configuration, and the print statement contains the expected message.
+
+Args:
+    mock_print (MagicMock): Mock for the print function.
+    mock_json_dump (MagicMock): Mock for the json.dump function.
+    mock_file_open (MagicMock): Mock for the open function.
+    mock_path (MagicMock): Mock for the path module.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classtests_1_1test__config__commands_1_1TestConfigCommands_af8d62310da2d768e21770f8f01ff5375_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_classtests_1_1test__config__commands_1_1TestConfigCommands_1a73a264dfb21e16003e095b79f6eab2ac"/><section>
+    <title>test_save_llm_config_failure()</title>
+<indexterm><primary>test_save_llm_config_failure</primary><secondary>tests.test_config_commands.TestConfigCommands</secondary></indexterm>
+<indexterm><primary>tests.test_config_commands.TestConfigCommands</primary><secondary>test_save_llm_config_failure</secondary></indexterm>
+<para><computeroutput>def tests.test_config_commands.TestConfigCommands.test_save_llm_config_failure ( self,  mock_print,  mock_file_open,  mock_get_config)</computeroutput></para>
+<para><literallayout><computeroutput>Test function to verify that the save_llm_config function returns False
+and prints an error message when it fails to save the LLM configuration
+due to a permission error.
+
+It sets up a mock configuration file that exists and calls the
+save_llm_config function with valid parameters. The function is expected
+to return False and print &quot;Error saving LLM configuration: Permission
+denied&quot; in case of a failure.
+
+Args:
+    self (TestLLMConfig): An instance of the test class.
+    mock_print (MagicMock): A MagicMock object representing the print function, which will be used
+        to assert that it was called with the expected error message.
+    mock_file_open (MagicMock): A MagicMock object representing the open function, which is not used in
+        this test but is included as a parameter for completeness.
+    mock_get_config (MagicMock): A MagicMock object representing the get_config function, which will be
+        used to return the mock configuration file.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classtests_1_1test__config__commands_1_1TestConfigCommands_a73a264dfb21e16003e095b79f6eab2ac_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_classtests_1_1test__config__commands_1_1TestConfigCommands_1acd8df8219441b9e9871b903a681400d9"/><section>
+    <title>test_save_llm_config_success()</title>
+<indexterm><primary>test_save_llm_config_success</primary><secondary>tests.test_config_commands.TestConfigCommands</secondary></indexterm>
+<indexterm><primary>tests.test_config_commands.TestConfigCommands</primary><secondary>test_save_llm_config_success</secondary></indexterm>
+<para><computeroutput>def tests.test_config_commands.TestConfigCommands.test_save_llm_config_success ( self,  mock_print,  mock_json_dump,  mock_file_open,  mock_get_config)</computeroutput></para>
+<para><literallayout><computeroutput>Test the save_llm_config function successfully.
+
+This function tests that the save_llm_config function correctly saves an
+LLM configuration and handles various mock objects and side effects. It
+ensures that the function returns True upon successful execution, writes
+the expected configuration to a file, and prints a confirmation message.
+
+Args:
+    mock_print (MagicMock): A mock object for the print function.
+    mock_json_dump (MagicMock): A mock object for json.dump.
+    mock_file_open (MagicMock): A mock object for file opening.
+    mock_get_config (MagicMock): A mock object to return a configuration file mock.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classtests_1_1test__config__commands_1_1TestConfigCommands_acd8df8219441b9e9871b903a681400d9_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<para>
+The documentation for this class was generated from the following file:</para>
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/<link linkend="_test__config__commands_8py">test_config_commands.py</link></section>
+</section>
diff --git a/docs345/docbook/classtests_1_1test__config__commands_1_1TestConfigCommands__coll__graph.md5 b/docs345/docbook/classtests_1_1test__config__commands_1_1TestConfigCommands__coll__graph.md5
new file mode 100644
index 0000000..eb46690
--- /dev/null
+++ b/docs345/docbook/classtests_1_1test__config__commands_1_1TestConfigCommands__coll__graph.md5
@@ -0,0 +1 @@
+2db6cf58d997b43a776fb21752d4aa29
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diff --git a/docs345/docbook/classtests_1_1test__config__commands_1_1TestConfigCommands__coll__graph.svg b/docs345/docbook/classtests_1_1test__config__commands_1_1TestConfigCommands__coll__graph.svg
new file mode 100644
index 0000000..9daa237
--- /dev/null
+++ b/docs345/docbook/classtests_1_1test__config__commands_1_1TestConfigCommands__coll__graph.svg
@@ -0,0 +1,50 @@
+<?xml version="1.0" encoding="UTF-8" standalone="no"?>
+<!DOCTYPE svg PUBLIC "-//W3C//DTD SVG 1.1//EN"
+ "http://www.w3.org/Graphics/SVG/1.1/DTD/svg11.dtd">
+<!-- Generated by graphviz version 2.43.0 (0)
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diff --git a/docs345/docbook/classtests_1_1test__web__config_1_1TestWebConfig.xml b/docs345/docbook/classtests_1_1test__web__config_1_1TestWebConfig.xml
new file mode 100644
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+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_classtests_1_1test__web__config_1_1TestWebConfig" xml:lang="en-US">
+<title>tests.test_web_config.TestWebConfig Class Reference</title>
+<indexterm><primary>tests.test_web_config.TestWebConfig</primary></indexterm>
+Collaboration diagram for tests.test_web_config.TestWebConfig:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classtests_1_1test__web__config_1_1TestWebConfig__coll__graph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+<simplesect>
+    <title>Public Member Functions    </title>
+        <itemizedlist>
+            <listitem><para>def <link linkend="_classtests_1_1test__web__config_1_1TestWebConfig_1afc6440352201d207ea8b4d26f8ccfa35">test_config_llm_web_server_setup</link> (self, mock_resource_filename, mock_server, mock_webbrowser)</para>
+</listitem>
+            <listitem><para>def <link linkend="_classtests_1_1test__web__config_1_1TestWebConfig_1a06e600222e426b003850509cb1d3190a">test_config_jira_web_server_setup</link> (self, mock_resource_filename, mock_server, mock_webbrowser)</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<section>
+<title>Member Function Documentation</title>
+<anchor xml:id="_classtests_1_1test__web__config_1_1TestWebConfig_1a06e600222e426b003850509cb1d3190a"/><section>
+    <title>test_config_jira_web_server_setup()</title>
+<indexterm><primary>test_config_jira_web_server_setup</primary><secondary>tests.test_web_config.TestWebConfig</secondary></indexterm>
+<indexterm><primary>tests.test_web_config.TestWebConfig</primary><secondary>test_config_jira_web_server_setup</secondary></indexterm>
+<para><computeroutput>def tests.test_web_config.TestWebConfig.test_config_jira_web_server_setup ( self,  mock_resource_filename,  mock_server,  mock_webbrowser)</computeroutput></para>
+<para><literallayout><computeroutput>Test the configuration and setup of a JIRA web server.
+
+This function tests the entire process of setting up a JIRA web server,
+including mocking necessary resources, configuring the server to shut
+down after handling one request, and verifying that the web browser is
+opened with the correct URL. The function uses several mocks to simulate
+external dependencies such as resource files, servers, and web browsers.
+
+Args:
+    mock_resource_filename (MagicMock): A MagicMock object for simulating the `resource_filename` function.
+    mock_server (MagicMock): A MagicMock object for simulating the server setup.
+    mock_webbrowser (MagicMock): A MagicMock object for simulating the web browser opening.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classtests_1_1test__web__config_1_1TestWebConfig_a06e600222e426b003850509cb1d3190a_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_classtests_1_1test__web__config_1_1TestWebConfig_1afc6440352201d207ea8b4d26f8ccfa35"/><section>
+    <title>test_config_llm_web_server_setup()</title>
+<indexterm><primary>test_config_llm_web_server_setup</primary><secondary>tests.test_web_config.TestWebConfig</secondary></indexterm>
+<indexterm><primary>tests.test_web_config.TestWebConfig</primary><secondary>test_config_llm_web_server_setup</secondary></indexterm>
+<para><computeroutput>def tests.test_web_config.TestWebConfig.test_config_llm_web_server_setup ( self,  mock_resource_filename,  mock_server,  mock_webbrowser)</computeroutput></para>
+<para><literallayout><computeroutput>Set up and test the web server configuration for an LLM (Large Language
+Model) web interface.
+
+This function configures a mock web server for testing purposes,
+including setting up resource filenames, mocking server behavior, and
+verifying that the web browser is opened and the server starts
+correctly. The function uses various mocks to simulate external
+dependencies such as `resource_filename` and `server`.
+
+Args:
+    mock_resource_filename (MagicMock): A MagicMock object simulating the `resource_filename` function.
+    mock_server (MagicMock): A MagicMock object simulating the context manager for the web server.
+    mock_webbrowser (MagicMock): A MagicMock object simulating the `webbrowser` module.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="classtests_1_1test__web__config_1_1TestWebConfig_afc6440352201d207ea8b4d26f8ccfa35_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<para>
+The documentation for this class was generated from the following file:</para>
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/<link linkend="_test__web__config_8py">test_web_config.py</link></section>
+</section>
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+</a>
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diff --git a/docs345/docbook/classtests_1_1test__web__config_1_1TestWebConfig_afc6440352201d207ea8b4d26f8ccfa35_cgraph.md5 b/docs345/docbook/classtests_1_1test__web__config_1_1TestWebConfig_afc6440352201d207ea8b4d26f8ccfa35_cgraph.md5
new file mode 100644
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new file mode 100644
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+<?xml version="1.0" encoding="UTF-8" standalone="no"?>
+<!DOCTYPE svg PUBLIC "-//W3C//DTD SVG 1.1//EN"
+ "http://www.w3.org/Graphics/SVG/1.1/DTD/svg11.dtd">
+<!-- Generated by graphviz version 2.43.0 (0)
+ -->
+<!-- Title: tests.test_web_config.TestWebConfig.test_config_llm_web_server_setup Pages: 1 -->
+<svg width="355pt" height="50pt"
+ viewBox="0.00 0.00 355.00 50.00" xmlns="http://www.w3.org/2000/svg" xmlns:xlink="http://www.w3.org/1999/xlink">
+<g id="graph0" class="graph" transform="scale(1 1) rotate(0) translate(4 46)">
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+<!-- Node1 -->
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+<g id="a_node1"><a xlink:title=" ">
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+<text text-anchor="start" x="8" y="-29.5" font-family="Helvetica,sans-Serif" font-size="10.00">tests.test_web_config.Test</text>
+<text text-anchor="start" x="8" y="-18.5" font-family="Helvetica,sans-Serif" font-size="10.00">WebConfig.test_config_llm</text>
+<text text-anchor="middle" x="73" y="-7.5" font-family="Helvetica,sans-Serif" font-size="10.00">_web_server_setup</text>
+</a>
+</g>
+</g>
+<!-- Node2 -->
+<g id="node2" class="node">
+<title>Node2</title>
+<g id="a_node2"><a xlink:href="$namespacepenify__hook_1_1commands_1_1config__commands.html#a185dfc34a655ed80e6c95939b6f3c35c" xlink:title=" ">
+<polygon fill="white" stroke="black" points="182,-6 182,-36 347,-36 347,-6 182,-6"/>
+<text text-anchor="start" x="190" y="-24" font-family="Helvetica,sans-Serif" font-size="10.00">penify_hook.commands.config</text>
+<text text-anchor="middle" x="264.5" y="-13" font-family="Helvetica,sans-Serif" font-size="10.00">_commands.config_llm_web</text>
+</a>
+</g>
+</g>
+<!-- Node1&#45;&gt;Node2 -->
+<g id="edge1" class="edge">
+<title>Node1&#45;&gt;Node2</title>
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diff --git a/docs345/docbook/commit-commands_8md.xml b/docs345/docbook/commit-commands_8md.xml
new file mode 100644
index 0000000..e646ddb
--- /dev/null
+++ b/docs345/docbook/commit-commands_8md.xml
@@ -0,0 +1,5 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_commit-commands_8md" xml:lang="en-US">
+<title>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/commit-commands.md File Reference</title>
+<indexterm><primary>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/commit-commands.md</primary></indexterm>
+</section>
diff --git a/docs345/docbook/commit__analyzer_8py.xml b/docs345/docbook/commit__analyzer_8py.xml
new file mode 100644
index 0000000..441f172
--- /dev/null
+++ b/docs345/docbook/commit__analyzer_8py.xml
@@ -0,0 +1,21 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_commit__analyzer_8py" xml:lang="en-US">
+<title>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commit_analyzer.py File Reference</title>
+<indexterm><primary>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commit_analyzer.py</primary></indexterm>
+<simplesect>
+    <title>Classes    </title>
+        <itemizedlist>
+            <listitem><para>class <link linkend="_classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook">penify_hook.commit_analyzer.CommitDocGenHook</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Namespaces    </title>
+        <itemizedlist>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook">penify_hook</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook_1_1commit__analyzer">penify_hook.commit_analyzer</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+</section>
diff --git a/docs345/docbook/commit__commands_8py.xml b/docs345/docbook/commit__commands_8py.xml
new file mode 100644
index 0000000..e5ce1b8
--- /dev/null
+++ b/docs345/docbook/commit__commands_8py.xml
@@ -0,0 +1,27 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_commit__commands_8py" xml:lang="en-US">
+<title>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/commit_commands.py File Reference</title>
+<indexterm><primary>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/commit_commands.py</primary></indexterm>
+<simplesect>
+    <title>Namespaces    </title>
+        <itemizedlist>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook">penify_hook</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook_1_1commands">penify_hook.commands</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook_1_1commands_1_1commit__commands">penify_hook.commands.commit_commands</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Functions    </title>
+        <itemizedlist>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1commands_1_1commit__commands_1a62564c4e8ad59fc46d56cb0f9122a71a">penify_hook.commands.commit_commands.commit_code</link> (api_url, token, message, open_terminal, generate_description, llm_model=None, llm_api_base=None, llm_api_key=None, jira_url=None, jira_user=None, jira_api_token=None)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1commands_1_1commit__commands_1a8627583116eb78e31a4d3cdc16d2f15c">penify_hook.commands.commit_commands.setup_commit_parser</link> (parser)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1commands_1_1commit__commands_1af4f739f524c38b437e4e47673d683e23">penify_hook.commands.commit_commands.handle_commit</link> (args)</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+</section>
diff --git a/docs345/docbook/config-commands_8md.xml b/docs345/docbook/config-commands_8md.xml
new file mode 100644
index 0000000..0aeb920
--- /dev/null
+++ b/docs345/docbook/config-commands_8md.xml
@@ -0,0 +1,5 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_config-commands_8md" xml:lang="en-US">
+<title>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/config-commands.md File Reference</title>
+<indexterm><primary>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/config-commands.md</primary></indexterm>
+</section>
diff --git a/docs345/docbook/config__command_8py.xml b/docs345/docbook/config__command_8py.xml
new file mode 100644
index 0000000..8196895
--- /dev/null
+++ b/docs345/docbook/config__command_8py.xml
@@ -0,0 +1,23 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_config__command_8py" xml:lang="en-US">
+<title>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/config_command.py File Reference</title>
+<indexterm><primary>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/config_command.py</primary></indexterm>
+<simplesect>
+    <title>Namespaces    </title>
+        <itemizedlist>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook">penify_hook</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook_1_1config__command">penify_hook.config_command</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Functions    </title>
+        <itemizedlist>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1config__command_1a4f3eb92164a69df1446d745f8a09285e">penify_hook.config_command.setup_config_parser</link> (parent_parser)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1config__command_1a240e5331681eb574ac319d7458783bde">penify_hook.config_command.handle_config</link> (args)</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+</section>
diff --git a/docs345/docbook/config__commands_8py.xml b/docs345/docbook/config__commands_8py.xml
new file mode 100644
index 0000000..e587f56
--- /dev/null
+++ b/docs345/docbook/config__commands_8py.xml
@@ -0,0 +1,50 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_config__commands_8py" xml:lang="en-US">
+<title>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py File Reference</title>
+<indexterm><primary>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py</primary></indexterm>
+<simplesect>
+    <title>Namespaces    </title>
+        <itemizedlist>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook">penify_hook</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook_1_1commands">penify_hook.commands</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook_1_1commands_1_1config__commands">penify_hook.commands.config_commands</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Functions    </title>
+        <itemizedlist>
+            <listitem><para>None <link linkend="_namespacepenify__hook_1_1commands_1_1config__commands_1aabe277132ce0bc0aacef951cf1dee2ae">penify_hook.commands.config_commands.load_env_files</link> ()</para>
+</listitem>
+            <listitem><para>Path <link linkend="_namespacepenify__hook_1_1commands_1_1config__commands_1a6559a82d0bf727703d550d1003d3ed20">penify_hook.commands.config_commands.get_penify_config</link> ()</para>
+</listitem>
+            <listitem><para>Any <link linkend="_namespacepenify__hook_1_1commands_1_1config__commands_1a3caf2b062dd33b1f1d7ddc7224f0ff87">penify_hook.commands.config_commands.get_env_var_or_default</link> (str env_var, Any default=None)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1commands_1_1config__commands_1a4617bc5956e502c9555dc0dda0376df4">penify_hook.commands.config_commands.save_llm_config</link> (model, api_base, api_key)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1commands_1_1config__commands_1ab2486ac2bf16b4a671e49625bfa4f9b4">penify_hook.commands.config_commands.save_jira_config</link> (url, username, api_token)</para>
+</listitem>
+            <listitem><para>Dict[str, str] <link linkend="_namespacepenify__hook_1_1commands_1_1config__commands_1a6492bc8e7df6e38bb06ad05e572d4cc0">penify_hook.commands.config_commands.get_llm_config</link> ()</para>
+</listitem>
+            <listitem><para>Dict[str, str] <link linkend="_namespacepenify__hook_1_1commands_1_1config__commands_1a15bf3685c4dcb5c15ba6a4055e484cf2">penify_hook.commands.config_commands.get_jira_config</link> ()</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1commands_1_1config__commands_1a185dfc34a655ed80e6c95939b6f3c35c">penify_hook.commands.config_commands.config_llm_web</link> ()</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1commands_1_1config__commands_1af115198ea5d6808ccb98733957f50b06">penify_hook.commands.config_commands.config_jira_web</link> ()</para>
+</listitem>
+            <listitem><para>Optional[str] <link linkend="_namespacepenify__hook_1_1commands_1_1config__commands_1a5503d51c905e2f1b299b12d2a73bd812">penify_hook.commands.config_commands.get_token</link> ()</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Variables    </title>
+        <itemizedlist>
+            <listitem><para>bool <link linkend="_namespacepenify__hook_1_1commands_1_1config__commands_1a152642ab83cf6219b604bda6122aba67">penify_hook.commands.config_commands.DOTENV_AVAILABLE</link> = True</para>
+</listitem>
+            <listitem><para><link linkend="_namespacepenify__hook_1_1commands_1_1config__commands_1a4b202072a3a3b8515c9c254622e9c880">penify_hook.commands.config_commands.path</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+</section>
diff --git a/docs345/docbook/conftest_8py.xml b/docs345/docbook/conftest_8py.xml
new file mode 100644
index 0000000..968b1e8
--- /dev/null
+++ b/docs345/docbook/conftest_8py.xml
@@ -0,0 +1,14 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_conftest_8py" xml:lang="en-US">
+<title>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/conftest.py File Reference</title>
+<indexterm><primary>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/conftest.py</primary></indexterm>
+<simplesect>
+    <title>Namespaces    </title>
+        <itemizedlist>
+            <listitem><para>namespace <link linkend="_namespacetests">tests</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacetests_1_1conftest">tests.conftest</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+</section>
diff --git a/docs345/docbook/constants_8py.xml b/docs345/docbook/constants_8py.xml
new file mode 100644
index 0000000..795ae17
--- /dev/null
+++ b/docs345/docbook/constants_8py.xml
@@ -0,0 +1,23 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_constants_8py" xml:lang="en-US">
+<title>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/constants.py File Reference</title>
+<indexterm><primary>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/constants.py</primary></indexterm>
+<simplesect>
+    <title>Namespaces    </title>
+        <itemizedlist>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook">penify_hook</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook_1_1constants">penify_hook.constants</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Variables    </title>
+        <itemizedlist>
+            <listitem><para>string <link linkend="_namespacepenify__hook_1_1constants_1af198b5d1fc2f44657a2061aa324af3e0">penify_hook.constants.API_URL</link> = &apos;http://localhost:8000/api&apos;</para>
+</listitem>
+            <listitem><para>string <link linkend="_namespacepenify__hook_1_1constants_1a316c5a606e4440fb8224c6544c3a15f0">penify_hook.constants.DASHBOARD_URL</link> = &quot;https://dashboard.penify.dev/auth/localhost/login&quot;</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+</section>
diff --git a/docs345/docbook/detailed-usage_8md.xml b/docs345/docbook/detailed-usage_8md.xml
new file mode 100644
index 0000000..e16d6f2
--- /dev/null
+++ b/docs345/docbook/detailed-usage_8md.xml
@@ -0,0 +1,5 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_detailed-usage_8md" xml:lang="en-US">
+<title>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/detailed-usage.md File Reference</title>
+<indexterm><primary>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/detailed-usage.md</primary></indexterm>
+</section>
diff --git a/docs345/docbook/dir_063e2d5fe58a131099a7fe4200cca78c.xml b/docs345/docbook/dir_063e2d5fe58a131099a7fe4200cca78c.xml
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+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_dir_063e2d5fe58a131099a7fe4200cca78c" xml:lang="en-US">
+<title>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests Directory Reference</title>
+<indexterm><primary>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests Directory Reference</primary></indexterm>
+Directory dependency graph for tests:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="dir_063e2d5fe58a131099a7fe4200cca78c_dep.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+<simplesect>
+    <title>Files    </title>
+        <itemizedlist>
+            <listitem><para>file <link linkend="_tests_2____init_____8py">__init__.py</link></para>
+</listitem>
+            <listitem><para>file <link linkend="_conftest_8py">conftest.py</link></para>
+</listitem>
+            <listitem><para>file <link linkend="_test__commit__commands_8py">test_commit_commands.py</link></para>
+</listitem>
+            <listitem><para>file <link linkend="_test__config__commands_8py">test_config_commands.py</link></para>
+</listitem>
+            <listitem><para>file <link linkend="_test__doc__commands_8py">test_doc_commands.py</link></para>
+</listitem>
+            <listitem><para>file <link linkend="_test__web__config_8py">test_web_config.py</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+</section>
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diff --git a/docs345/docbook/dir_1648a057408aae8db85b8e3797335623.xml b/docs345/docbook/dir_1648a057408aae8db85b8e3797335623.xml
new file mode 100644
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+<title>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs Directory Reference</title>
+<indexterm><primary>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs Directory Reference</primary></indexterm>
+Directory dependency graph for docs:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="dir_1648a057408aae8db85b8e3797335623_dep.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
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diff --git a/docs345/docbook/dir_624fa2a8bce97f0444ac5cca335d4e23.xml b/docs345/docbook/dir_624fa2a8bce97f0444ac5cca335d4e23.xml
new file mode 100644
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+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_dir_624fa2a8bce97f0444ac5cca335d4e23" xml:lang="en-US">
+<title>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands Directory Reference</title>
+<indexterm><primary>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands Directory Reference</primary></indexterm>
+Directory dependency graph for commands:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="dir_624fa2a8bce97f0444ac5cca335d4e23_dep.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+<simplesect>
+    <title>Files    </title>
+        <itemizedlist>
+            <listitem><para>file <link linkend="_penify__hook_2commands_2____init_____8py">__init__.py</link></para>
+</listitem>
+            <listitem><para>file <link linkend="_auth__commands_8py">auth_commands.py</link></para>
+</listitem>
+            <listitem><para>file <link linkend="_commit__commands_8py">commit_commands.py</link></para>
+</listitem>
+            <listitem><para>file <link linkend="_config__commands_8py">config_commands.py</link></para>
+</listitem>
+            <listitem><para>file <link linkend="_doc__commands_8py">doc_commands.py</link></para>
+</listitem>
+            <listitem><para>file <link linkend="_hook__commands_8py">hook_commands.py</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+</section>
diff --git a/docs345/docbook/dir_624fa2a8bce97f0444ac5cca335d4e23_dep.md5 b/docs345/docbook/dir_624fa2a8bce97f0444ac5cca335d4e23_dep.md5
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+<g id="graph0" class="graph" transform="scale(1 1) rotate(0) translate(4 91)">
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+<title>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli Directory Reference</title>
+<indexterm><primary>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli Directory Reference</primary></indexterm>
+<simplesect>
+    <title>Directories    </title>
+        <itemizedlist>
+            <listitem><para>directory <link linkend="_dir_1648a057408aae8db85b8e3797335623">docs</link></para>
+</listitem>
+            <listitem><para>directory <link linkend="_dir_f88c3381c1861b3f7ca1f3d63cf244b5">penify_hook</link></para>
+</listitem>
+            <listitem><para>directory <link linkend="_dir_063e2d5fe58a131099a7fe4200cca78c">tests</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Files    </title>
+        <itemizedlist>
+            <listitem><para>file <link linkend="_setup_8py">setup.py</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+</section>
diff --git a/docs345/docbook/dir_f88c3381c1861b3f7ca1f3d63cf244b5.xml b/docs345/docbook/dir_f88c3381c1861b3f7ca1f3d63cf244b5.xml
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+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_dir_f88c3381c1861b3f7ca1f3d63cf244b5" xml:lang="en-US">
+<title>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook Directory Reference</title>
+<indexterm><primary>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook Directory Reference</primary></indexterm>
+Directory dependency graph for penify_hook:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="dir_f88c3381c1861b3f7ca1f3d63cf244b5_dep.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+<simplesect>
+    <title>Directories    </title>
+        <itemizedlist>
+            <listitem><para>directory <link linkend="_dir_624fa2a8bce97f0444ac5cca335d4e23">commands</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Files    </title>
+        <itemizedlist>
+            <listitem><para>file <link linkend="_penify__hook_2____init_____8py">__init__.py</link></para>
+</listitem>
+            <listitem><para>file <link linkend="_api__client_8py">api_client.py</link></para>
+</listitem>
+            <listitem><para>file <link linkend="_base__analyzer_8py">base_analyzer.py</link></para>
+</listitem>
+            <listitem><para>file <link linkend="_commit__analyzer_8py">commit_analyzer.py</link></para>
+</listitem>
+            <listitem><para>file <link linkend="_config__command_8py">config_command.py</link></para>
+</listitem>
+            <listitem><para>file <link linkend="_constants_8py">constants.py</link></para>
+</listitem>
+            <listitem><para>file <link linkend="_file__analyzer_8py">file_analyzer.py</link></para>
+</listitem>
+            <listitem><para>file <link linkend="_folder__analyzer_8py">folder_analyzer.py</link></para>
+</listitem>
+            <listitem><para>file <link linkend="_git__analyzer_8py">git_analyzer.py</link></para>
+</listitem>
+            <listitem><para>file <link linkend="_jira__client_8py">jira_client.py</link></para>
+</listitem>
+            <listitem><para>file <link linkend="_llm__client_8py">llm_client.py</link></para>
+</listitem>
+            <listitem><para>file <link linkend="_login__command_8py">login_command.py</link></para>
+</listitem>
+            <listitem><para>file <link linkend="_main_8py">main.py</link></para>
+</listitem>
+            <listitem><para>file <link linkend="_ui__utils_8py">ui_utils.py</link></para>
+</listitem>
+            <listitem><para>file <link linkend="_utils_8py">utils.py</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+</section>
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+<title>clusterdir_f88c3381c1861b3f7ca1f3d63cf244b5</title>
+<g id="a_clust2"><a xlink:href="dir_f88c3381c1861b3f7ca1f3d63cf244b5.html">
+<polygon fill="#edf0f7" stroke="#404040" stroke-width="2" points="16,-16 16,-68 198,-68 198,-16 16,-16"/>
+</a>
+</g>
+</g>
+<!-- dir_f88c3381c1861b3f7ca1f3d63cf244b5 -->
+<g id="node1" class="node">
+<title>dir_f88c3381c1861b3f7ca1f3d63cf244b5</title>
+<text text-anchor="middle" x="152" y="-39.5" font-family="Helvetica,sans-Serif" font-size="10.00">penify_hook</text>
+</g>
+<!-- dir_624fa2a8bce97f0444ac5cca335d4e23 -->
+<g id="node2" class="node">
+<title>dir_624fa2a8bce97f0444ac5cca335d4e23</title>
+<g id="a_node2"><a xlink:href="dir_624fa2a8bce97f0444ac5cca335d4e23.html" xlink:title="commands">
+<polygon fill="#a2b4d6" stroke="#404040" points="95.5,-60 24.5,-60 24.5,-24 95.5,-24 95.5,-60"/>
+<text text-anchor="middle" x="60" y="-39.5" font-family="Helvetica,sans-Serif" font-size="10.00">commands</text>
+</a>
+</g>
+</g>
+</g>
+</svg>
diff --git a/docs345/docbook/doc__commands_8md.xml b/docs345/docbook/doc__commands_8md.xml
new file mode 100644
index 0000000..02bf56a
--- /dev/null
+++ b/docs345/docbook/doc__commands_8md.xml
@@ -0,0 +1,5 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_doc__commands_8md" xml:lang="en-US">
+<title>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/doc_commands.md File Reference</title>
+<indexterm><primary>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/doc_commands.md</primary></indexterm>
+</section>
diff --git a/docs345/docbook/doc__commands_8py.xml b/docs345/docbook/doc__commands_8py.xml
new file mode 100644
index 0000000..63e7889
--- /dev/null
+++ b/docs345/docbook/doc__commands_8py.xml
@@ -0,0 +1,34 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_doc__commands_8py" xml:lang="en-US">
+<title>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/doc_commands.py File Reference</title>
+<indexterm><primary>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/doc_commands.py</primary></indexterm>
+<simplesect>
+    <title>Namespaces    </title>
+        <itemizedlist>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook">penify_hook</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook_1_1commands">penify_hook.commands</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook_1_1commands_1_1doc__commands">penify_hook.commands.doc_commands</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Functions    </title>
+        <itemizedlist>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1commands_1_1doc__commands_1a4daac68bc563432bf25c85dc78081a25">penify_hook.commands.doc_commands.generate_doc</link> (api_url, token, location=None)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1commands_1_1doc__commands_1acc7f4ead1b11951d885fa5c151c2cbe0">penify_hook.commands.doc_commands.setup_docgen_parser</link> (parser)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1commands_1_1doc__commands_1a2006ab13bff718ef783868a910c0b704">penify_hook.commands.doc_commands.handle_docgen</link> (args)</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Variables    </title>
+        <itemizedlist>
+            <listitem><para>string <link linkend="_namespacepenify__hook_1_1commands_1_1doc__commands_1a3e42540047da37565afffeaf106cb948">penify_hook.commands.doc_commands.docgen_description</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+</section>
diff --git a/docs345/docbook/example-workflows_8md.xml b/docs345/docbook/example-workflows_8md.xml
new file mode 100644
index 0000000..c2047f8
--- /dev/null
+++ b/docs345/docbook/example-workflows_8md.xml
@@ -0,0 +1,5 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_example-workflows_8md" xml:lang="en-US">
+<title>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/example-workflows.md File Reference</title>
+<indexterm><primary>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/example-workflows.md</primary></indexterm>
+</section>
diff --git a/docs345/docbook/file__analyzer_8py.xml b/docs345/docbook/file__analyzer_8py.xml
new file mode 100644
index 0000000..74b3fef
--- /dev/null
+++ b/docs345/docbook/file__analyzer_8py.xml
@@ -0,0 +1,28 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_file__analyzer_8py" xml:lang="en-US">
+<title>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/file_analyzer.py File Reference</title>
+<indexterm><primary>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/file_analyzer.py</primary></indexterm>
+<simplesect>
+    <title>Classes    </title>
+        <itemizedlist>
+            <listitem><para>class <link linkend="_classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook">penify_hook.file_analyzer.FileAnalyzerGenHook</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Namespaces    </title>
+        <itemizedlist>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook">penify_hook</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook_1_1file__analyzer">penify_hook.file_analyzer</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Variables    </title>
+        <itemizedlist>
+            <listitem><para><link linkend="_namespacepenify__hook_1_1file__analyzer_1af419a4965f079d58cac5a5281ddb1828">penify_hook.file_analyzer.logger</link> = logging.getLogger(__name__)</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+</section>
diff --git a/docs345/docbook/folder__analyzer_8py.xml b/docs345/docbook/folder__analyzer_8py.xml
new file mode 100644
index 0000000..1568b2c
--- /dev/null
+++ b/docs345/docbook/folder__analyzer_8py.xml
@@ -0,0 +1,21 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_folder__analyzer_8py" xml:lang="en-US">
+<title>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/folder_analyzer.py File Reference</title>
+<indexterm><primary>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/folder_analyzer.py</primary></indexterm>
+<simplesect>
+    <title>Classes    </title>
+        <itemizedlist>
+            <listitem><para>class <link linkend="_classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook">penify_hook.folder_analyzer.FolderAnalyzerGenHook</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Namespaces    </title>
+        <itemizedlist>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook">penify_hook</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook_1_1folder__analyzer">penify_hook.folder_analyzer</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+</section>
diff --git a/docs345/docbook/git__analyzer_8py.xml b/docs345/docbook/git__analyzer_8py.xml
new file mode 100644
index 0000000..c8d9358
--- /dev/null
+++ b/docs345/docbook/git__analyzer_8py.xml
@@ -0,0 +1,28 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_git__analyzer_8py" xml:lang="en-US">
+<title>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/git_analyzer.py File Reference</title>
+<indexterm><primary>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/git_analyzer.py</primary></indexterm>
+<simplesect>
+    <title>Classes    </title>
+        <itemizedlist>
+            <listitem><para>class <link linkend="_classpenify__hook_1_1git__analyzer_1_1GitDocGenHook">penify_hook.git_analyzer.GitDocGenHook</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Namespaces    </title>
+        <itemizedlist>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook">penify_hook</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook_1_1git__analyzer">penify_hook.git_analyzer</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Variables    </title>
+        <itemizedlist>
+            <listitem><para><link linkend="_namespacepenify__hook_1_1git__analyzer_1ac4ce143fdca789a79c66852c37d7363a">penify_hook.git_analyzer.logger</link> = logging.getLogger(__name__)</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+</section>
diff --git a/docs345/docbook/hook__commands_8py.xml b/docs345/docbook/hook__commands_8py.xml
new file mode 100644
index 0000000..a8474ab
--- /dev/null
+++ b/docs345/docbook/hook__commands_8py.xml
@@ -0,0 +1,34 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_hook__commands_8py" xml:lang="en-US">
+<title>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/hook_commands.py File Reference</title>
+<indexterm><primary>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/hook_commands.py</primary></indexterm>
+<simplesect>
+    <title>Namespaces    </title>
+        <itemizedlist>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook">penify_hook</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook_1_1commands">penify_hook.commands</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook_1_1commands_1_1hook__commands">penify_hook.commands.hook_commands</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Functions    </title>
+        <itemizedlist>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1commands_1_1hook__commands_1adff8f5d3bf1c3795974a391ee95b72b2">penify_hook.commands.hook_commands.install_git_hook</link> (location, token)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1commands_1_1hook__commands_1a81543eb5fa835fd1237f24e8bce6201d">penify_hook.commands.hook_commands.uninstall_git_hook</link> (location)</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Variables    </title>
+        <itemizedlist>
+            <listitem><para>string <link linkend="_namespacepenify__hook_1_1commands_1_1hook__commands_1ae82fd46e5a9219da1478b0476b8214b1">penify_hook.commands.hook_commands.HOOK_FILENAME</link> = &quot;post-commit&quot;</para>
+</listitem>
+            <listitem><para>string <link linkend="_namespacepenify__hook_1_1commands_1_1hook__commands_1a6a45aad71c8d32ce11a6dff8cee8bee7">penify_hook.commands.hook_commands.HOOK_TEMPLATE</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+</section>
diff --git a/docs345/docbook/index.xml b/docs345/docbook/index.xml
new file mode 100644
index 0000000..7678958
--- /dev/null
+++ b/docs345/docbook/index.xml
@@ -0,0 +1,116 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<book xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_index" xml:lang="en-US">
+    <info>
+    <title>penify-cli</title>
+    </info>
+<chapter>
+    <title>Penify CLI - Commit Commands</title>
+    <xi:include href="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+</chapter>
+<chapter>
+    <title>Penify CLI - Configuration Commands</title>
+    <xi:include href="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+</chapter>
+<chapter>
+    <title>Penify CLI - Detailed Usage Guide</title>
+    <xi:include href="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+</chapter>
+<chapter>
+    <title>Penify CLI - Documentation Generation Commands</title>
+    <xi:include href="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+</chapter>
+<chapter>
+    <title>Penify CLI Example Workflows</title>
+    <xi:include href="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+</chapter>
+<chapter>
+    <title>Penify CLI Tool</title>
+    <xi:include href="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+</chapter>
+<chapter>
+    <title>Namespace Documentation</title>
+<xi:include href="namespacepenify__hook.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+<xi:include href="namespacepenify__hook_1_1api__client.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+<xi:include href="namespacepenify__hook_1_1base__analyzer.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+<xi:include href="namespacepenify__hook_1_1commands.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+<xi:include href="namespacepenify__hook_1_1commands_1_1auth__commands.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+<xi:include href="namespacepenify__hook_1_1commands_1_1commit__commands.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+<xi:include href="namespacepenify__hook_1_1commands_1_1config__commands.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+<xi:include href="namespacepenify__hook_1_1commands_1_1doc__commands.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+<xi:include href="namespacepenify__hook_1_1commands_1_1hook__commands.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+<xi:include href="namespacepenify__hook_1_1commit__analyzer.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+<xi:include href="namespacepenify__hook_1_1config__command.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+<xi:include href="namespacepenify__hook_1_1constants.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+<xi:include href="namespacepenify__hook_1_1file__analyzer.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+<xi:include href="namespacepenify__hook_1_1folder__analyzer.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+<xi:include href="namespacepenify__hook_1_1git__analyzer.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+<xi:include href="namespacepenify__hook_1_1jira__client.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+<xi:include href="namespacepenify__hook_1_1llm__client.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+<xi:include href="namespacepenify__hook_1_1login__command.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+<xi:include href="namespacepenify__hook_1_1main.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+<xi:include href="namespacepenify__hook_1_1ui__utils.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+<xi:include href="namespacepenify__hook_1_1utils.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+<xi:include href="namespacesetup.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+<xi:include href="namespacetests.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+<xi:include href="namespacetests_1_1conftest.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+<xi:include href="namespacetests_1_1test__commit__commands.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+<xi:include href="namespacetests_1_1test__config__commands.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+<xi:include href="namespacetests_1_1test__doc__commands.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+<xi:include href="namespacetests_1_1test__web__config.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+</chapter>
+<chapter>
+    <title>Class Documentation</title>
+    <xi:include href="classpenify__hook_1_1api__client_1_1APIClient.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="classException.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="classpenify__hook_1_1utils_1_1GitRepoNotFoundError.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="classpenify__hook_1_1jira__client_1_1JiraClient.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="classpenify__hook_1_1llm__client_1_1LLMClient.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="classtests_1_1test__commit__commands_1_1TestCommitCommands.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="classtests_1_1test__config__commands_1_1TestConfigCommands.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="classtests_1_1test__web__config_1_1TestWebConfig.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+</chapter>
+<chapter>
+    <title>File Documentation</title>
+    <xi:include href="commit-commands_8md.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="config-commands_8md.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="detailed-usage_8md.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="doc__commands_8md.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="example-workflows_8md.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="penify-cli-documentation_8md.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="api__client_8py.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="base__analyzer_8py.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="penify__hook_2____init_____8py.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="penify__hook_2commands_2____init_____8py.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="tests_2____init_____8py.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="auth__commands_8py.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="commit__commands_8py.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="config__commands_8py.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="doc__commands_8py.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="hook__commands_8py.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="commit__analyzer_8py.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="config__command_8py.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="constants_8py.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="file__analyzer_8py.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="folder__analyzer_8py.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="git__analyzer_8py.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="jira__client_8py.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="llm__client_8py.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="login__command_8py.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="main_8py.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="ui__utils_8py.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="utils_8py.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="README_8md.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="setup_8py.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="conftest_8py.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="test__commit__commands_8py.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="test__config__commands_8py.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="test__doc__commands_8py.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+    <xi:include href="test__web__config_8py.xml" xmlns:xi="http://www.w3.org/2001/XInclude"/>
+</chapter>
+<index/>
+</book>
diff --git a/docs345/docbook/jira__client_8py.xml b/docs345/docbook/jira__client_8py.xml
new file mode 100644
index 0000000..5e567c3
--- /dev/null
+++ b/docs345/docbook/jira__client_8py.xml
@@ -0,0 +1,28 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_jira__client_8py" xml:lang="en-US">
+<title>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py File Reference</title>
+<indexterm><primary>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py</primary></indexterm>
+<simplesect>
+    <title>Classes    </title>
+        <itemizedlist>
+            <listitem><para>class <link linkend="_classpenify__hook_1_1jira__client_1_1JiraClient">penify_hook.jira_client.JiraClient</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Namespaces    </title>
+        <itemizedlist>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook">penify_hook</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook_1_1jira__client">penify_hook.jira_client</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Variables    </title>
+        <itemizedlist>
+            <listitem><para>bool <link linkend="_namespacepenify__hook_1_1jira__client_1a5593ea3415081eca1eea92e4c1ad1aa2">penify_hook.jira_client.JIRA_AVAILABLE</link> = True</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+</section>
diff --git a/docs345/docbook/llm__client_8py.xml b/docs345/docbook/llm__client_8py.xml
new file mode 100644
index 0000000..4462405
--- /dev/null
+++ b/docs345/docbook/llm__client_8py.xml
@@ -0,0 +1,21 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_llm__client_8py" xml:lang="en-US">
+<title>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/llm_client.py File Reference</title>
+<indexterm><primary>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/llm_client.py</primary></indexterm>
+<simplesect>
+    <title>Classes    </title>
+        <itemizedlist>
+            <listitem><para>class <link linkend="_classpenify__hook_1_1llm__client_1_1LLMClient">penify_hook.llm_client.LLMClient</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Namespaces    </title>
+        <itemizedlist>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook">penify_hook</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook_1_1llm__client">penify_hook.llm_client</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+</section>
diff --git a/docs345/docbook/login__command_8py.xml b/docs345/docbook/login__command_8py.xml
new file mode 100644
index 0000000..43b6e89
--- /dev/null
+++ b/docs345/docbook/login__command_8py.xml
@@ -0,0 +1,23 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_login__command_8py" xml:lang="en-US">
+<title>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/login_command.py File Reference</title>
+<indexterm><primary>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/login_command.py</primary></indexterm>
+<simplesect>
+    <title>Namespaces    </title>
+        <itemizedlist>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook">penify_hook</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook_1_1login__command">penify_hook.login_command</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Functions    </title>
+        <itemizedlist>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1login__command_1aae63db4c484797bead34b7d874020c6a">penify_hook.login_command.setup_login_parser</link> (parser)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1login__command_1ae4bf932fbafeff834b0a0c5a37f74ccd">penify_hook.login_command.handle_login</link> (args)</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+</section>
diff --git a/docs345/docbook/main_8py.xml b/docs345/docbook/main_8py.xml
new file mode 100644
index 0000000..9a1179a
--- /dev/null
+++ b/docs345/docbook/main_8py.xml
@@ -0,0 +1,21 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_main_8py" xml:lang="en-US">
+<title>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/main.py File Reference</title>
+<indexterm><primary>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/main.py</primary></indexterm>
+<simplesect>
+    <title>Namespaces    </title>
+        <itemizedlist>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook">penify_hook</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook_1_1main">penify_hook.main</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Functions    </title>
+        <itemizedlist>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1main_1a16838b20df4bd14ee4b5e1dd2906738f">penify_hook.main.main</link> ()</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+</section>
diff --git a/docs345/docbook/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README.xml b/docs345/docbook/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README.xml
new file mode 100644
index 0000000..d56dbcd
--- /dev/null
+++ b/docs345/docbook/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README.xml
@@ -0,0 +1,200 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README" xml:lang="en-US">
+
+<para> </para>
+
+<para>A CLI tool to generate smart commit messages, code documentation, and more.</para>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md157">
+<title>Features</title>
+
+<para><itemizedlist>
+<listitem>
+<para>Automatically generate documentation for your code</para>
+</listitem><listitem>
+<para>Support for multiple programming languages</para>
+</listitem><listitem>
+<para>Git hook integration for automatic documentation on commits</para>
+</listitem><listitem>
+<para>Folder and file analysis</para>
+</listitem></itemizedlist>
+</para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md158">
+<title>Installation</title>
+
+<para>Install from PyPI:</para>
+
+<para><literallayout><computeroutput>pip&#32;install&#32;penify
+</computeroutput></literallayout></para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md159">
+<title>Usage</title>
+
+<para>Penify CLI provides several subcommands for different functionalities, organized into basic commands (no login required) and advanced commands (login required).</para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md160">
+<title>Basic Commands (No login required)</title>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md161">
+<title>Commit</title>
+
+<para>Generate smart commit messages using local LLM:</para>
+
+<para><literallayout><computeroutput>penify&#32;commit&#32;[-m&#32;&quot;Optional&#32;message&quot;]&#32;[-e]&#32;[-d]
+</computeroutput></literallayout></para>
+
+<para>Options:<itemizedlist>
+<listitem>
+<para><computeroutput>-m, --message</computeroutput>: Optional custom commit message</para>
+</listitem><listitem>
+<para><computeroutput>-e, --terminal</computeroutput>: Open editor to modify commit message before committing</para>
+</listitem><listitem>
+<para><computeroutput>-d, --description</computeroutput>: Generate commit message with both title and description (without this flag, only title is generated)</para>
+</listitem></itemizedlist>
+</para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md162">
+<title>Config</title>
+
+<para>Configure local LLM and JIRA settings:</para>
+
+<para><literallayout><computeroutput>#&#32;Configure&#32;LLM&#32;settings
+penify&#32;config&#32;llm&#32;--model&#32;MODEL_NAME&#32;[--api-base&#32;API_URL]&#32;[--api-key&#32;API_KEY]
+
+#&#32;Configure&#32;LLM&#32;settings&#32;through&#32;web&#32;interface
+penify&#32;config&#32;llm-web
+
+#&#32;Configure&#32;JIRA&#32;settings
+penify&#32;config&#32;jira&#32;--url&#32;JIRA_URL&#32;--username&#32;USERNAME&#32;--api-token&#32;TOKEN&#32;[--verify]
+
+#&#32;Configure&#32;JIRA&#32;settings&#32;through&#32;web&#32;interface
+penify&#32;config&#32;jira-web
+</computeroutput></literallayout></para>
+</section>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md163">
+<title>Advanced Commands (Login required)</title>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md164">
+<title>Login</title>
+
+<para>To log in and obtain an API token:</para>
+
+<para><literallayout><computeroutput>penify&#32;login
+</computeroutput></literallayout></para>
+
+<para>This command will open a browser window for authentication. After successful login, the API key will be saved locally for future use.</para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md165">
+<title>Documentation Generation</title>
+
+<para>Generate documentation for Git diff, files or folders:</para>
+
+<para><literallayout><computeroutput>#&#32;Generate&#32;documentation&#32;for&#32;latest&#32;Git&#32;commit&#32;diff
+penify&#32;docgen
+
+#&#32;Generate&#32;documentation&#32;for&#32;specific&#32;file&#32;or&#32;folder
+penify&#32;docgen&#32;-l&#32;/path/to/file/or/folder
+</computeroutput></literallayout></para>
+
+<para>Options:<itemizedlist>
+<listitem>
+<para><computeroutput>-l, --location</computeroutput>: Path to specific file or folder for documentation generation (defaults to current directory)</para>
+</listitem></itemizedlist>
+</para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md166">
+<title>Git Hook Management</title>
+
+<para>Install or uninstall Git post-commit hooks:</para>
+
+<para><literallayout><computeroutput>#&#32;Install&#32;Git&#32;hook
+penify&#32;docgen&#32;install-hook&#32;[-l&#32;/path/to/repo]
+
+#&#32;Uninstall&#32;Git&#32;hook
+penify&#32;docgen&#32;uninstall-hook&#32;[-l&#32;/path/to/repo]
+</computeroutput></literallayout></para>
+
+<para>Options:<itemizedlist>
+<listitem>
+<para><computeroutput>-l, --location</computeroutput>: Path to the Git repository (defaults to current directory)</para>
+</listitem></itemizedlist>
+</para>
+</section>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md167">
+<title>Authentication</title>
+
+<para>Penify CLI uses an API token for authentication with advanced features.</para>
+
+<para>If no token is available and you try to access an advanced feature, you&apos;ll be prompted to log in.</para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md168">
+<title>Local LLM Configuration</title>
+
+<para>For commit message generation, Penify can use a local LLM. Configure it using:</para>
+
+<para><literallayout><computeroutput>penify&#32;config&#32;llm&#32;--model&#32;MODEL_NAME&#32;--api-base&#32;API_URL&#32;--api-key&#32;API_KEY
+</computeroutput></literallayout></para>
+
+<para>Common configurations:<itemizedlist>
+<listitem>
+<para>OpenAI: <computeroutput>--model gpt-3.5-turbo --api-base <link xlink:href="https://api.openai.com/v1">https://api.openai.com/v1</link> --api-key YOUR_KEY</computeroutput></para>
+</listitem><listitem>
+<para>Anthropic: <computeroutput>--model claude-2 --api-base <link xlink:href="https://api.anthropic.com">https://api.anthropic.com</link> --api-key YOUR_KEY</computeroutput></para>
+</listitem></itemizedlist>
+</para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md169">
+<title>JIRA Integration</title>
+
+<para>Configure JIRA integration to enhance commit messages with issue details:</para>
+
+<para><literallayout><computeroutput>penify&#32;config&#32;jira&#32;--url&#32;https://your-domain.atlassian.net&#32;--username&#32;your-email@example.com&#32;--api-token&#32;YOUR_API_TOKEN
+</computeroutput></literallayout></para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md170">
+<title>Development</title>
+
+<para>To set up the development environment:</para>
+
+<para><orderedlist>
+<listitem>
+<para>Clone the repository: <literallayout><computeroutput>git&#32;clone&#32;https://github.com/SingularityX-ai/penify-cli.git
+</computeroutput></literallayout></para>
+</listitem><listitem>
+<para>Install the package in editable mode: <literallayout><computeroutput>pip&#32;install&#32;-e&#32;.
+</computeroutput></literallayout></para>
+</listitem></orderedlist>
+</para>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md171">
+<title>Running Tests</title>
+
+<para><literallayout><computeroutput>pytest
+</computeroutput></literallayout></para>
+</section>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md172">
+<title>License</title>
+
+<para>This project is licensed under the MIT License.</para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md173">
+<title>Author</title>
+
+<para>Suman Saurabh (<link xlink:href="mailto:ss.sumansaurabh92@gmail.com">ss.sumansaurabh92@gmail.com</link>)</para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md174">
+<title>Contributing</title>
+
+<para>Contributions are welcome! Please feel free to submit a Pull Request.</para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md175">
+<title>Issues</title>
+
+<para>If you encounter any problems or have suggestions, please file an issue on the <link xlink:href="https://github.com/SingularityX-ai/penify/issues">GitHub repository</link>.</para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md176">
+<title>Support</title>
+
+<para>For automated API Documentation, Architecture Documentation, Code Documentation, Pull Request Documentation, or if you need a demo, please join our <link xlink:href="https://discord.gg/wqrc8JeV">Discord support channel</link>. </para>
+</section>
+</section>
diff --git a/docs345/docbook/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands.xml b/docs345/docbook/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands.xml
new file mode 100644
index 0000000..17b8b89
--- /dev/null
+++ b/docs345/docbook/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands.xml
@@ -0,0 +1,215 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands" xml:lang="en-US">
+
+<para>The <computeroutput>commit</computeroutput> command allows you to generate smart, AI-powered commit messages for your Git changes. This document explains all available options and combinations.</para>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md1">
+<title>Basic Usage</title>
+
+<para><literallayout><computeroutput>penify&#32;commit
+</computeroutput></literallayout></para>
+
+<para>By default, this command:<itemizedlist>
+<listitem>
+<para>Analyzes your staged Git changes</para>
+</listitem><listitem>
+<para>Generates a concise commit title only</para>
+</listitem><listitem>
+<para>Uses local LLM if configured, or falls back to Penify API</para>
+</listitem></itemizedlist>
+</para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md2">
+<title>Command Options</title>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md3">
+<title>&lt;tt&gt;-m, --message&lt;/tt&gt;</title>
+
+<para>Provide context for the commit message generation:</para>
+
+<para><literallayout><computeroutput>penify&#32;commit&#32;-m&#32;&quot;Fix&#32;login&#32;flow&quot;
+</computeroutput></literallayout></para>
+
+<para>This hint helps the AI understand your intention and improves the quality of the generated message.</para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md4">
+<title>&lt;tt&gt;-e, --terminal&lt;/tt&gt;</title>
+
+<para>Open an editor to review and edit the generated commit message before committing:</para>
+
+<para><literallayout><computeroutput>penify&#32;commit&#32;-e
+</computeroutput></literallayout></para>
+
+<para>This opens your default Git editor with the generated message for review.</para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md5">
+<title>&lt;tt&gt;-d, --description&lt;/tt&gt;</title>
+
+<para>Generate a detailed commit message with both title and description:</para>
+
+<para><literallayout><computeroutput>penify&#32;commit&#32;-d
+</computeroutput></literallayout></para>
+
+<para>Without this flag, only the commit title is generated.</para>
+</section>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md6">
+<title>Option Combinations</title>
+
+<para>You can combine these options for different workflows:</para>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md7">
+<title>Generate Title Only with Context</title>
+
+<para><literallayout><computeroutput>penify&#32;commit&#32;-m&#32;&quot;Update&#32;login&#32;UI&quot;
+</computeroutput></literallayout></para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md8">
+<title>Generate Title and Description with Context</title>
+
+<para><literallayout><computeroutput>penify&#32;commit&#32;-m&#32;&quot;Update&#32;login&#32;UI&quot;&#32;-d
+</computeroutput></literallayout></para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md9">
+<title>Generate and Edit Full Commit Message</title>
+
+<para><literallayout><computeroutput>penify&#32;commit&#32;-d&#32;-e
+</computeroutput></literallayout></para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md10">
+<title>Generate, Edit, and Provide Context</title>
+
+<para><literallayout><computeroutput>penify&#32;commit&#32;-m&#32;&quot;Refactor&#32;authentication&quot;&#32;-d&#32;-e
+</computeroutput></literallayout></para>
+</section>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md11">
+<title>LLM and JIRA Integration</title>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md12">
+<title>Using Local LLM</title>
+
+<para>If you&apos;ve configured a local LLM using <computeroutput>penify config llm</computeroutput>, the commit command will automatically use it for message generation.</para>
+
+<para>Benefits:<itemizedlist>
+<listitem>
+<para>Privacy: your code changes don&apos;t leave your machine</para>
+</listitem><listitem>
+<para>Speed: no network latency</para>
+</listitem><listitem>
+<para>Works offline</para>
+</listitem></itemizedlist>
+</para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md13">
+<title>JIRA Enhancement</title>
+
+<para>If you&apos;ve configured JIRA integration using <computeroutput>penify config jira</computeroutput>, the commit command will:</para>
+
+<para><orderedlist>
+<listitem>
+<para>Detect JIRA issue references in your changes</para>
+</listitem><listitem>
+<para>Fetch issue details from your JIRA instance</para>
+</listitem><listitem>
+<para>Include issue information in the commit message</para>
+</listitem><listitem>
+<para>Format the commit message according to JIRA&apos;s smart commit format</para>
+</listitem></orderedlist>
+</para>
+
+<para>Example output: <literallayout><computeroutput>PROJ-123:&#32;Fix&#32;authentication&#32;bug&#32;in&#32;login&#32;flow
+
+-&#32;Updated&#32;OAuth&#32;token&#32;validation
+-&#32;Fixed&#32;session&#32;timeout&#32;handling
+-&#32;Added&#32;unit&#32;tests&#32;for&#32;edge&#32;cases
+
+[PROJ-123]
+</computeroutput></literallayout></para>
+</section>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md14">
+<title>Configuration Requirements</title>
+
+<para>For the <computeroutput>commit</computeroutput> command to work:</para>
+
+<para><orderedlist>
+<listitem>
+<para>You must have configured either:<itemizedlist>
+<listitem>
+<para>Local LLM via <computeroutput>penify config llm</computeroutput>, OR</para>
+</listitem><listitem>
+<para>Logged in via <computeroutput>penify login</computeroutput></para>
+</listitem></itemizedlist>
+</para>
+</listitem><listitem>
+<para>For JIRA enhancement (optional):<itemizedlist>
+<listitem>
+<para>Configure JIRA via <computeroutput>penify config jira</computeroutput></para>
+</listitem></itemizedlist>
+</para>
+</listitem></orderedlist>
+</para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md15">
+<title>Examples</title>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md16">
+<title>Basic Commit with Default Settings</title>
+
+<para><literallayout><computeroutput>#&#32;Stage&#32;your&#32;changes
+git&#32;add&#32;.
+
+#&#32;Generate&#32;commit&#32;message
+penify&#32;commit
+
+#&#32;Commit&#32;with&#32;the&#32;generated&#32;message
+git&#32;commit&#32;-m&#32;&quot;Generated&#32;message&#32;here&quot;
+</computeroutput></literallayout></para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md17">
+<title>Full Workflow with All Features</title>
+
+<para><literallayout><computeroutput>#&#32;Stage&#32;your&#32;changes
+git&#32;add&#32;.
+
+#&#32;Generate&#32;detailed&#32;commit&#32;message&#32;with&#32;JIRA&#32;integration,&#32;
+#&#32;provide&#32;context,&#32;and&#32;open&#32;editor&#32;for&#32;review
+penify&#32;commit&#32;-m&#32;&quot;Fix&#32;login&#32;issue&quot;&#32;-d&#32;-e
+
+#&#32;The&#32;commit&#32;is&#32;automatically&#32;completed&#32;after&#32;you&#32;save&#32;and&#32;exit&#32;the&#32;editor
+</computeroutput></literallayout></para>
+</section>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md18">
+<title>Troubleshooting</title>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md19">
+<title>Common Issues</title>
+
+<para><orderedlist>
+<listitem>
+<para>**&quot;No LLM model or API token provided&quot;**<itemizedlist>
+<listitem>
+<para>Run <computeroutput>penify config llm</computeroutput> to configure a local LLM, or</para>
+</listitem><listitem>
+<para>Run <computeroutput>penify login</computeroutput> to authenticate with Penify</para>
+</listitem></itemizedlist>
+</para>
+</listitem><listitem>
+<para>**&quot;Failed to connect to JIRA&quot;**<itemizedlist>
+<listitem>
+<para>Check your JIRA configuration with <computeroutput>cat ~/.penify</computeroutput></para>
+</listitem><listitem>
+<para>Verify your network connection</para>
+</listitem><listitem>
+<para>Ensure your JIRA credentials are valid</para>
+</listitem></itemizedlist>
+</para>
+</listitem><listitem>
+<para>**&quot;Error initializing LLM client&quot;**<itemizedlist>
+<listitem>
+<para>Verify your LLM configuration settings</para>
+</listitem><listitem>
+<para>Ensure the LLM API is accessible </para>
+</listitem></itemizedlist>
+</para>
+</listitem></orderedlist>
+</para>
+</section>
+</section>
+</section>
diff --git a/docs345/docbook/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands.xml b/docs345/docbook/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands.xml
new file mode 100644
index 0000000..802b3db
--- /dev/null
+++ b/docs345/docbook/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands.xml
@@ -0,0 +1,273 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands" xml:lang="en-US">
+
+<para>The <computeroutput>config</computeroutput> command allows you to set up and manage configuration settings for Penify CLI. This document explains all available configuration options and how to use them.</para>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md21">
+<title>Configuration Overview</title>
+
+<para>Penify CLI stores configuration in a JSON file at <computeroutput>~/.penify/config.json</computeroutput>. The configuration includes:</para>
+
+<para><itemizedlist>
+<listitem>
+<para>LLM (Large Language Model) settings for local commit message generation</para>
+</listitem><listitem>
+<para>JIRA integration settings for enhanced commit messages</para>
+</listitem><listitem>
+<para>API tokens and other credentials</para>
+</listitem></itemizedlist>
+</para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md22">
+<title>Basic Usage</title>
+
+<para><literallayout><computeroutput>#&#32;Configure&#32;LLM&#32;settings
+penify&#32;config&#32;llm
+
+#&#32;Configure&#32;JIRA&#32;integration
+penify&#32;config&#32;jira
+</computeroutput></literallayout></para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md23">
+<title>LLM Configuration</title>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md24">
+<title>Web Interface</title>
+
+<para>Running <computeroutput>penify config llm</computeroutput> opens a web interface in your browser where you can configure:</para>
+
+<para><orderedlist>
+<listitem>
+<para><emphasis role="bold">Model</emphasis>: The LLM model to use (e.g., <computeroutput>gpt-3.5-turbo</computeroutput>)</para>
+</listitem><listitem>
+<para><emphasis role="bold">API Base URL</emphasis>: The endpoint URL for your LLM API (e.g., <computeroutput><link xlink:href="https://api.openai.com/v1">https://api.openai.com/v1</link></computeroutput>)</para>
+</listitem><listitem>
+<para><emphasis role="bold">API Key</emphasis>: Your authentication key for the LLM API</para>
+</listitem></orderedlist>
+</para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md25">
+<title>Supported LLMs</title>
+
+<para>Penify CLI supports various LLM providers:</para>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md26">
+<title>OpenAI</title>
+
+<para><itemizedlist>
+<listitem>
+<para>Model: <computeroutput>gpt-3.5-turbo</computeroutput> or <computeroutput>gpt-4</computeroutput></para>
+</listitem><listitem>
+<para>API Base: <computeroutput><link xlink:href="https://api.openai.com/v1">https://api.openai.com/v1</link></computeroutput></para>
+</listitem><listitem>
+<para>API Key: Your OpenAI API key</para>
+</listitem></itemizedlist>
+</para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md27">
+<title>Anthropic</title>
+
+<para><itemizedlist>
+<listitem>
+<para>Model: <computeroutput>claude-instant-1</computeroutput> or <computeroutput>claude-2</computeroutput></para>
+</listitem><listitem>
+<para>API Base: <computeroutput><link xlink:href="https://api.anthropic.com/v1">https://api.anthropic.com/v1</link></computeroutput></para>
+</listitem><listitem>
+<para>API Key: Your Anthropic API key</para>
+</listitem></itemizedlist>
+</para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md28">
+<title>Ollama (Local)</title>
+
+<para><itemizedlist>
+<listitem>
+<para>Model: <computeroutput>llama2</computeroutput> or any model you have installed</para>
+</listitem><listitem>
+<para>API Base: <computeroutput><link xlink:href="http://localhost:11434">http://localhost:11434</link></computeroutput></para>
+</listitem><listitem>
+<para>API Key: (leave blank)</para>
+</listitem></itemizedlist>
+</para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md29">
+<title>Azure OpenAI</title>
+
+<para><itemizedlist>
+<listitem>
+<para>Model: Your deployed model name</para>
+</listitem><listitem>
+<para>API Base: Your Azure endpoint</para>
+</listitem><listitem>
+<para>API Key: Your Azure API key</para>
+</listitem></itemizedlist>
+</para>
+</section>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md30">
+<title>Configuration File Structure</title>
+
+<para>After configuration, your <computeroutput>~/.penify/config.json</computeroutput> will contain:</para>
+
+<para><literallayout><computeroutput>{
+&#32;&#32;&quot;llm&quot;:&#32;{
+&#32;&#32;&#32;&#32;&quot;model&quot;:&#32;&quot;gpt-3.5-turbo&quot;,
+&#32;&#32;&#32;&#32;&quot;api_base&quot;:&#32;&quot;https://api.openai.com/v1&quot;,
+&#32;&#32;&#32;&#32;&quot;api_key&quot;:&#32;&quot;sk-...&quot;
+&#32;&#32;}
+}
+</computeroutput></literallayout></para>
+</section>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md31">
+<title>JIRA Configuration</title>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md32">
+<title>Web Interface</title>
+
+<para>Running <computeroutput>penify config jira</computeroutput> opens a web interface where you can configure:</para>
+
+<para><orderedlist>
+<listitem>
+<para><emphasis role="bold">JIRA URL</emphasis>: Your JIRA instance URL (e.g., <computeroutput><link xlink:href="https://yourcompany.atlassian.net">https://yourcompany.atlassian.net</link></computeroutput>)</para>
+</listitem><listitem>
+<para><emphasis role="bold">Username</emphasis>: Your JIRA username (typically your email)</para>
+</listitem><listitem>
+<para><emphasis role="bold">API Token</emphasis>: Your JIRA API token</para>
+</listitem></orderedlist>
+</para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md33">
+<title>Creating a JIRA API Token</title>
+
+<para><orderedlist>
+<listitem>
+<para>Log in to <link xlink:href="https://id.atlassian.com/manage-profile/security/api-tokens">https://id.atlassian.com/manage-profile/security/api-tokens</link></para>
+</listitem><listitem>
+<para>Click &quot;Create API token&quot;</para>
+</listitem><listitem>
+<para>Give it a name (e.g., &quot;Penify CLI&quot;)</para>
+</listitem><listitem>
+<para>Copy the generated token and paste it into the configuration</para>
+</listitem></orderedlist>
+</para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md34">
+<title>Configuration File Structure</title>
+
+<para>After configuration, your <computeroutput>~/.penify/config.json</computeroutput> will contain:</para>
+
+<para><literallayout><computeroutput>{
+&#32;&#32;&quot;jira&quot;:&#32;{
+&#32;&#32;&#32;&#32;&quot;url&quot;:&#32;&quot;https://yourcompany.atlassian.net&quot;,
+&#32;&#32;&#32;&#32;&quot;username&quot;:&#32;&quot;your.email@example.com&quot;,
+&#32;&#32;&#32;&#32;&quot;api_token&quot;:&#32;&quot;your-jira-api-token&quot;
+&#32;&#32;}
+}
+</computeroutput></literallayout></para>
+</section>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md35">
+<title>Configuration Locations</title>
+
+<para>Penify CLI looks for configuration in multiple locations:</para>
+
+<para><orderedlist>
+<listitem>
+<para>Project-specific: <computeroutput>.penify/config.json</computeroutput> in the Git repository root</para>
+</listitem><listitem>
+<para>User-specific: <computeroutput>~/.penify/config.json</computeroutput> in your home directory</para>
+</listitem></orderedlist>
+</para>
+
+<para>The project-specific configuration takes precedence if both exist.</para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md36">
+<title>Environment Variables</title>
+
+<para>You can override configuration settings using environment variables:</para>
+
+<para><itemizedlist>
+<listitem>
+<para><computeroutput>PENIFY_API_TOKEN</computeroutput>: Override the stored API token</para>
+</listitem><listitem>
+<para><computeroutput>PENIFY_LLM_MODEL</computeroutput>: Override the configured LLM model</para>
+</listitem><listitem>
+<para><computeroutput>PENIFY_LLM_API_BASE</computeroutput>: Override the configured LLM API base URL</para>
+</listitem><listitem>
+<para><computeroutput>PENIFY_LLM_API_KEY</computeroutput>: Override the configured LLM API key</para>
+</listitem><listitem>
+<para><computeroutput>PENIFY_JIRA_URL</computeroutput>: Override the configured JIRA URL</para>
+</listitem><listitem>
+<para><computeroutput>PENIFY_JIRA_USER</computeroutput>: Override the configured JIRA username</para>
+</listitem><listitem>
+<para><computeroutput>PENIFY_JIRA_TOKEN</computeroutput>: Override the configured JIRA API token</para>
+</listitem></itemizedlist>
+</para>
+
+<para>Example: <literallayout><computeroutput>export&#32;PENIFY_LLM_MODEL=&quot;gpt-4&quot;
+penify&#32;commit
+</computeroutput></literallayout></para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md37">
+<title>Command-Line Configuration</title>
+
+<para>For advanced users or scripting, you can directly edit the configuration file:</para>
+
+<para><literallayout><computeroutput>#&#32;View&#32;current&#32;configuration
+cat&#32;~/.penify/config.json
+
+#&#32;Edit&#32;configuration&#32;with&#32;your&#32;preferred&#32;editor
+nano&#32;~/.penify/config.json
+</computeroutput></literallayout></para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md38">
+<title>Sharing Configuration</title>
+
+<para>You can share configuration between machines by copying the <computeroutput>.penify/config.json</computeroutput> file. However, be cautious with API keys and credentials.</para>
+
+<para>For team settings, consider:<orderedlist>
+<listitem>
+<para>Using a project-specific <computeroutput>.penify/config.json</computeroutput> with shared settings</para>
+</listitem><listitem>
+<para>Excluding API keys from shared configuration</para>
+</listitem><listitem>
+<para>Using environment variables for sensitive credentials</para>
+</listitem></orderedlist>
+</para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md39">
+<title>Troubleshooting</title>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md40">
+<title>Common Issues</title>
+
+<para><orderedlist>
+<listitem>
+<para>**&quot;Error reading configuration file&quot;**<itemizedlist>
+<listitem>
+<para>Check if the file exists: <computeroutput>ls -la ~/.penify</computeroutput></para>
+</listitem><listitem>
+<para>Ensure it contains valid JSON: <computeroutput>cat ~/.penify/config.json</computeroutput></para>
+</listitem></itemizedlist>
+</para>
+</listitem><listitem>
+<para>**&quot;Failed to connect to LLM API&quot;**<itemizedlist>
+<listitem>
+<para>Verify API base URL and API key</para>
+</listitem><listitem>
+<para>Check network connectivity to the API endpoint</para>
+</listitem><listitem>
+<para>Ensure your account has access to the specified model</para>
+</listitem></itemizedlist>
+</para>
+</listitem><listitem>
+<para>**&quot;Failed to connect to JIRA&quot;**<itemizedlist>
+<listitem>
+<para>Check JIRA URL format (should include <computeroutput><link xlink:href="https://">https://</link></computeroutput>)</para>
+</listitem><listitem>
+<para>Verify username and API token</para>
+</listitem><listitem>
+<para>Ensure your JIRA account has API access permissions </para>
+</listitem></itemizedlist>
+</para>
+</listitem></orderedlist>
+</para>
+</section>
+</section>
+</section>
diff --git a/docs345/docbook/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage.xml b/docs345/docbook/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage.xml
new file mode 100644
index 0000000..dca0026
--- /dev/null
+++ b/docs345/docbook/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage.xml
@@ -0,0 +1,261 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage" xml:lang="en-US">
+
+<para>This document provides in-depth information about all features and capabilities of the Penify CLI tool.</para>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md42">
+<title>Table of Contents</title>
+
+<para><itemizedlist>
+<listitem>
+<para>Penify CLI - Detailed Usage Guide<itemizedlist>
+<listitem>
+<para>Table of Contents</para>
+</listitem><listitem>
+<para>Authentication<itemizedlist>
+<listitem>
+<para>Login Process</para>
+</listitem><listitem>
+<para>API Token Storage</para>
+</listitem><listitem>
+<para>Token Precedence</para>
+</listitem></itemizedlist>
+</para>
+</listitem><listitem>
+<para>Command Overview</para>
+</listitem><listitem>
+<para>Commit Message Generation</para>
+</listitem><listitem>
+<para>Code Documentation Generation<itemizedlist>
+<listitem>
+<para>Use Cases</para>
+</listitem><listitem>
+<para>Authentication Requirement</para>
+</listitem></itemizedlist>
+</para>
+</listitem><listitem>
+<para>Configuration Settings</para>
+</listitem><listitem>
+<para>Git Hooks<itemizedlist>
+<listitem>
+<para>Post-Commit Hook</para>
+</listitem><listitem>
+<para>Custom Hook Location</para>
+</listitem></itemizedlist>
+</para>
+</listitem><listitem>
+<para>Advanced Use Cases<itemizedlist>
+<listitem>
+<para>CI/CD Integration</para>
+</listitem><listitem>
+<para>Remote Repository Documentation</para>
+</listitem></itemizedlist>
+</para>
+</listitem><listitem>
+<para>Troubleshooting<itemizedlist>
+<listitem>
+<para>Common Issues</para>
+</listitem><listitem>
+<para>Logs</para>
+</listitem><listitem>
+<para>Support</para>
+</listitem></itemizedlist>
+</para>
+</listitem></itemizedlist>
+</para>
+</listitem></itemizedlist>
+</para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md43">
+<title>Authentication</title>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md44">
+<title>Login Process</title>
+
+<para>When you run <computeroutput>penify login</computeroutput>, the tool:</para>
+
+<para><orderedlist>
+<listitem>
+<para>Opens your default web browser</para>
+</listitem><listitem>
+<para>Redirects you to Penify&apos;s login page</para>
+</listitem><listitem>
+<para>Captures the authentication token after successful login</para>
+</listitem><listitem>
+<para>Saves the token in <computeroutput>~/.penify</computeroutput> file</para>
+</listitem></orderedlist>
+</para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md45">
+<title>API Token Storage</title>
+
+<para>API tokens are stored in your home directory in the <computeroutput>.penify</computeroutput> file. This JSON file contains:</para>
+
+<para><literallayout><computeroutput>{
+&#32;&#32;&quot;api_keys&quot;:&#32;&quot;your-api-token&quot;,
+&#32;&#32;&quot;llm&quot;:&#32;{&#32;&quot;model&quot;:&#32;&quot;...&quot;,&#32;&quot;api_base&quot;:&#32;&quot;...&quot;,&#32;&quot;api_key&quot;:&#32;&quot;...&quot;&#32;},
+&#32;&#32;&quot;jira&quot;:&#32;{&#32;&quot;url&quot;:&#32;&quot;...&quot;,&#32;&quot;username&quot;:&#32;&quot;...&quot;,&#32;&quot;api_token&quot;:&#32;&quot;...&quot;&#32;}
+}
+</computeroutput></literallayout></para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md46">
+<title>Token Precedence</title>
+
+<para><orderedlist>
+<listitem>
+<para>Environment variable <computeroutput>PENIFY_API_TOKEN</computeroutput> (highest priority)</para>
+</listitem><listitem>
+<para>Token in <computeroutput>~/.penify</computeroutput> file</para>
+</listitem></orderedlist>
+</para>
+</section>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md47">
+<title>Command Overview</title>
+
+<para><literallayout><computeroutput>penify
+├──&#32;commit&#32;&#32;&#32;&#32;&#32;&#32;&#32;&#32;Generate&#32;smart&#32;commit&#32;messages
+├──&#32;config&#32;&#32;&#32;&#32;&#32;&#32;&#32;&#32;Configure&#32;local&#32;LLM&#32;and&#32;JIRA
+│&#32;&#32;&#32;├──&#32;llm&#32;&#32;&#32;&#32;&#32;&#32;&#32;Configure&#32;local&#32;LLM&#32;settings
+│&#32;&#32;&#32;└──&#32;jira&#32;&#32;&#32;&#32;&#32;&#32;Configure&#32;JIRA&#32;integration
+├──&#32;login&#32;&#32;&#32;&#32;&#32;&#32;&#32;&#32;&#32;Log&#32;in&#32;to&#32;Penify&#32;account
+└──&#32;docgen&#32;&#32;&#32;&#32;&#32;&#32;&#32;&#32;Generate&#32;code&#32;documentation
+&#32;&#32;&#32;&#32;├──&#32;install-hook&#32;&#32;&#32;&#32;&#32;Install&#32;Git&#32;post-commit&#32;hook
+&#32;&#32;&#32;&#32;└──&#32;uninstall-hook&#32;&#32;&#32;Remove&#32;Git&#32;post-commit&#32;hook
+</computeroutput></literallayout></para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md48">
+<title>Commit Message Generation</title>
+
+<para>The <computeroutput>commit</computeroutput> command analyzes your staged changes and generates meaningful commit messages. It can:</para>
+
+<para><itemizedlist>
+<listitem>
+<para>Use a local LLM if configured</para>
+</listitem><listitem>
+<para>Enhance messages with JIRA issue details</para>
+</listitem><listitem>
+<para>Provide both title and description</para>
+</listitem></itemizedlist>
+</para>
+
+<para>For specific options and examples, see <link linkend="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands">docs/commit-commands.md</link>.</para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md49">
+<title>Code Documentation Generation</title>
+
+<para>The <computeroutput>docgen</computeroutput> command generates documentation for your code:</para>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md50">
+<title>Use Cases</title>
+
+<para><orderedlist>
+<listitem>
+<para><emphasis role="bold">Current Git Diff</emphasis>: Default behavior, documents only changed files</para>
+</listitem><listitem>
+<para><emphasis role="bold">Specific File</emphasis>: Pass a file path with <computeroutput>-l path/to/file.py</computeroutput></para>
+</listitem><listitem>
+<para><emphasis role="bold">Entire Folder</emphasis>: Pass a folder path with <computeroutput>-l path/to/folder</computeroutput></para>
+</listitem></orderedlist>
+</para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md51">
+<title>Authentication Requirement</title>
+
+<para>This feature requires authentication with a Penify account. Run <computeroutput>penify login</computeroutput> before using documentation features.</para>
+</section>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md52">
+<title>Configuration Settings</title>
+
+<para>Configure local settings using the <computeroutput>config</computeroutput> command:</para>
+
+<para><itemizedlist>
+<listitem>
+<para><emphasis role="bold">LLM Settings</emphasis>: Configure a local LLM for commit message generation</para>
+</listitem><listitem>
+<para><emphasis role="bold">JIRA Settings</emphasis>: Set up JIRA integration for enhanced commit messages</para>
+</listitem></itemizedlist>
+</para>
+
+<para>For detailed configuration options, see <link linkend="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands">docs/config-commands.md</link>.</para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md53">
+<title>Git Hooks</title>
+
+<para>Penify can install Git hooks to automate documentation generation:</para>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md54">
+<title>Post-Commit Hook</title>
+
+<para><itemizedlist>
+<listitem>
+<para><emphasis role="bold">Install</emphasis>: <computeroutput>penify docgen install-hook</computeroutput></para>
+</listitem><listitem>
+<para><emphasis role="bold">What it does</emphasis>: Automatically generates documentation for changed files after each commit</para>
+</listitem><listitem>
+<para><emphasis role="bold">Uninstall</emphasis>: <computeroutput>penify docgen uninstall-hook</computeroutput></para>
+</listitem></itemizedlist>
+</para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md55">
+<title>Custom Hook Location</title>
+
+<para>You can specify a custom location for Git hooks:</para>
+
+<para><literallayout><computeroutput>penify&#32;docgen&#32;install-hook&#32;-l&#32;/path/to/git/repo
+</computeroutput></literallayout></para>
+</section>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md56">
+<title>Advanced Use Cases</title>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md57">
+<title>CI/CD Integration</title>
+
+<para>For CI/CD pipelines:</para>
+
+<para><orderedlist>
+<listitem>
+<para>Set <computeroutput>PENIFY_API_TOKEN</computeroutput> as an environment variable</para>
+</listitem><listitem>
+<para>Run commands without requiring interactive login</para>
+</listitem></orderedlist>
+</para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md58">
+<title>Remote Repository Documentation</title>
+
+<para>Generate documentation for an entire repository:</para>
+
+<para><literallayout><computeroutput>git&#32;clone&#32;https://github.com/user/repo
+cd&#32;repo
+penify&#32;docgen&#32;-l&#32;.
+</computeroutput></literallayout></para>
+</section>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md59">
+<title>Troubleshooting</title>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md60">
+<title>Common Issues</title>
+
+<para><orderedlist>
+<listitem>
+<para><emphasis role="bold">API Key Errors</emphasis>: Ensure you&apos;ve run <computeroutput>penify login</computeroutput> or set <computeroutput>PENIFY_API_TOKEN</computeroutput></para>
+</listitem><listitem>
+<para><emphasis role="bold">LLM Configuration</emphasis>: Check your LLM settings with <computeroutput>cat ~/.penify</computeroutput></para>
+</listitem><listitem>
+<para><emphasis role="bold">JIRA Integration</emphasis>: Verify JIRA credentials in your configuration</para>
+</listitem></orderedlist>
+</para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md61">
+<title>Logs</title>
+
+<para>For more detailed logs, you can set the environment variable:</para>
+
+<para><literallayout><computeroutput>export&#32;PENIFY_DEBUG=1
+</computeroutput></literallayout></para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md62">
+<title>Support</title>
+
+<para>For additional help, visit <link xlink:href="https://docs.penify.dev/">https://docs.penify.dev/</link> or contact <link xlink:href="mailto:support@penify.dev">support@penify.dev</link> </para>
+</section>
+</section>
+</section>
diff --git a/docs345/docbook/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.xml b/docs345/docbook/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.xml
new file mode 100644
index 0000000..a3547da
--- /dev/null
+++ b/docs345/docbook/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.xml
@@ -0,0 +1,402 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands" xml:lang="en-US">
+
+<para>This document provides a detailed guide to all permutations and combinations of the <computeroutput>docgen</computeroutput> command, including extensive information about Git hook commands for automating documentation generation.</para>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md64">
+<title>Table of Contents</title>
+
+<para><itemizedlist>
+<listitem>
+<para>Basic Usage</para>
+</listitem><listitem>
+<para>Command Options</para>
+</listitem><listitem>
+<para>Option Combinations</para>
+</listitem><listitem>
+<para>Git Hook Commands<itemizedlist>
+<listitem>
+<para>Hook Installation</para>
+</listitem><listitem>
+<para>Hook Customization</para>
+</listitem><listitem>
+<para>Hook Uninstallation</para>
+</listitem></itemizedlist>
+</para>
+</listitem><listitem>
+<para>Advanced Use Cases</para>
+</listitem><listitem>
+<para>Troubleshooting</para>
+</listitem></itemizedlist>
+</para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md65">
+<title>Basic Usage</title>
+
+<para><literallayout><computeroutput>penify&#32;docgen
+</computeroutput></literallayout></para>
+
+<para>By default, this command:<itemizedlist>
+<listitem>
+<para>Analyzes the current Git diff (changes since last commit)</para>
+</listitem><listitem>
+<para>Generates documentation for changed files only</para>
+</listitem><listitem>
+<para>Requires authentication via <computeroutput>penify login</computeroutput></para>
+</listitem></itemizedlist>
+</para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md66">
+<title>Command Options</title>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md67">
+<title>&lt;tt&gt;-l, --location&lt;/tt&gt;</title>
+
+<para>Specify a target for documentation generation:</para>
+
+<para><literallayout><computeroutput>#&#32;Generate&#32;documentation&#32;for&#32;a&#32;specific&#32;file
+penify&#32;docgen&#32;-l&#32;path/to/file.py
+
+#&#32;Generate&#32;documentation&#32;for&#32;a&#32;specific&#32;folder
+penify&#32;docgen&#32;-l&#32;path/to/folder
+</computeroutput></literallayout></para>
+
+<para>Without this flag, Penify analyzes only Git-tracked modified files.</para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md68">
+<title>Subcommands</title>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md69">
+<title>&lt;tt&gt;install-hook&lt;/tt&gt;</title>
+
+<para>Install a Git post-commit hook to automatically generate documentation:</para>
+
+<para><literallayout><computeroutput>penify&#32;docgen&#32;install-hook
+</computeroutput></literallayout></para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md70">
+<title>&lt;tt&gt;uninstall-hook&lt;/tt&gt;</title>
+
+<para>Remove the Git post-commit hook:</para>
+
+<para><literallayout><computeroutput>penify&#32;docgen&#32;uninstall-hook
+</computeroutput></literallayout></para>
+</section>
+</section>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md71">
+<title>Option Combinations</title>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md72">
+<title>Generate Documentation for Current Git Diff</title>
+
+<para><literallayout><computeroutput>#&#32;Basic&#32;usage&#32;-&#32;current&#32;Git&#32;diff
+penify&#32;docgen
+</computeroutput></literallayout></para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md73">
+<title>Generate Documentation for a Specific File</title>
+
+<para><literallayout><computeroutput>#&#32;Single&#32;file&#32;documentation
+penify&#32;docgen&#32;-l&#32;src/main.py
+</computeroutput></literallayout></para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md74">
+<title>Generate Documentation for a Folder</title>
+
+<para><literallayout><computeroutput>#&#32;Folder&#32;documentation
+penify&#32;docgen&#32;-l&#32;src/models/
+</computeroutput></literallayout></para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md75">
+<title>Install Hook in Current Repository</title>
+
+<para><literallayout><computeroutput>#&#32;Install&#32;hook&#32;in&#32;current&#32;Git&#32;repository
+penify&#32;docgen&#32;install-hook
+</computeroutput></literallayout></para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md76">
+<title>Install Hook in Specific Repository</title>
+
+<para><literallayout><computeroutput>#&#32;Install&#32;hook&#32;in&#32;a&#32;specific&#32;Git&#32;repository
+penify&#32;docgen&#32;install-hook&#32;-l&#32;/path/to/repo
+</computeroutput></literallayout></para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md77">
+<title>Uninstall Hook from Current Repository</title>
+
+<para><literallayout><computeroutput>#&#32;Uninstall&#32;hook&#32;from&#32;current&#32;Git&#32;repository
+penify&#32;docgen&#32;uninstall-hook
+</computeroutput></literallayout></para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md78">
+<title>Uninstall Hook from Specific Repository</title>
+
+<para><literallayout><computeroutput>#&#32;Uninstall&#32;hook&#32;from&#32;a&#32;specific&#32;Git&#32;repository
+penify&#32;docgen&#32;uninstall-hook&#32;-l&#32;/path/to/repo
+</computeroutput></literallayout></para>
+</section>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md79">
+<title>Git Hook Commands</title>
+
+<para>Penify provides Git hook commands to automate documentation generation as part of your Git workflow.</para>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md80">
+<title>Hook Installation</title>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md81">
+<title>How Hooks Work</title>
+
+<para>When you install a Git hook with <computeroutput>penify docgen install-hook</computeroutput>, Penify:</para>
+
+<para><orderedlist>
+<listitem>
+<para>Creates a post-commit hook script in the <computeroutput>.git/hooks</computeroutput> directory</para>
+</listitem><listitem>
+<para>Makes the script executable</para>
+</listitem><listitem>
+<para>Configures the hook to run <computeroutput>penify docgen</computeroutput> after each commit</para>
+</listitem></orderedlist>
+</para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md82">
+<title>Hook Script Content</title>
+
+<para>The generated post-commit hook contains:</para>
+
+<para><literallayout><computeroutput>#!/bin/sh
+#&#32;This&#32;is&#32;a&#32;post-commit&#32;hook&#32;generated&#32;by&#32;penify.
+#&#32;Automatically&#32;generates&#32;documentation&#32;for&#32;changed&#32;files&#32;after&#32;each&#32;commit.
+
+penify&#32;docgen&#32;-gf&#32;/path/to/git/repository&#32;-t&#32;your_api_token
+</computeroutput></literallayout></para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md83">
+<title>Installation Location</title>
+
+<para>By default, hooks are installed in the current Git repository. You can specify a different location:</para>
+
+<para><literallayout><computeroutput>penify&#32;docgen&#32;install-hook&#32;-l&#32;/path/to/repo
+</computeroutput></literallayout></para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md84">
+<title>Installation Requirements</title>
+
+<para>To install hooks, you need:<itemizedlist>
+<listitem>
+<para>A valid Penify API token (login first with <computeroutput>penify login</computeroutput>)</para>
+</listitem><listitem>
+<para>Write permissions to the <computeroutput>.git/hooks</computeroutput> directory</para>
+</listitem></itemizedlist>
+</para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md85">
+<title>Verifying Installation</title>
+
+<para>After installation, you can verify that the hook is installed:</para>
+
+<para><literallayout><computeroutput>cat&#32;.git/hooks/post-commit
+</computeroutput></literallayout></para>
+</section>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md86">
+<title>Hook Customization</title>
+
+<para>You can customize the post-commit hook after installation:</para>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md87">
+<title>Modifying Hook Behavior</title>
+
+<para><orderedlist>
+<listitem>
+<para>Edit the <computeroutput>.git/hooks/post-commit</computeroutput> file</para>
+</listitem><listitem>
+<para>Add additional options to the <computeroutput>penify docgen</computeroutput> command</para>
+</listitem><listitem>
+<para>Add other commands to run after commit</para>
+</listitem></orderedlist>
+</para>
+
+<para>Example of a customized hook:</para>
+
+<para><literallayout><computeroutput>#!/bin/sh
+#&#32;This&#32;is&#32;a&#32;post-commit&#32;hook&#32;generated&#32;by&#32;penify.
+#&#32;Automatically&#32;generates&#32;documentation&#32;for&#32;changed&#32;files&#32;after&#32;each&#32;commit.
+
+#&#32;Generate&#32;documentation
+penify&#32;docgen&#32;-gf&#32;/path/to/git/repository&#32;-t&#32;your_api_token
+
+#&#32;Additional&#32;custom&#32;commands
+echo&#32;&quot;Documentation&#32;generation&#32;complete!&quot;
+</computeroutput></literallayout></para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md88">
+<title>Advanced Hook Scenarios</title>
+
+<para><emphasis role="bold">Conditional Documentation Generation</emphasis>:</para>
+
+<para><literallayout><computeroutput>#!/bin/sh
+#&#32;Only&#32;generate&#32;documentation&#32;for&#32;commits&#32;to&#32;the&#32;main&#32;branch
+BRANCH=$(git&#32;rev-parse&#32;--abbrev-ref&#32;HEAD)
+if&#32;[&#32;&quot;$BRANCH&quot;&#32;=&#32;&quot;main&quot;&#32;];&#32;then
+&#32;&#32;penify&#32;docgen&#32;-gf&#32;/path/to/git/repository&#32;-t&#32;your_api_token
+fi
+</computeroutput></literallayout></para>
+
+<para><emphasis role="bold">Documenting Specific Files/Folders</emphasis>:</para>
+
+<para><literallayout><computeroutput>#!/bin/sh
+#&#32;Only&#32;document&#32;Python&#32;files&#32;in&#32;the&#32;src&#32;directory
+penify&#32;docgen&#32;-l&#32;src/&#32;-gf&#32;/path/to/git/repository&#32;-t&#32;your_api_token
+</computeroutput></literallayout></para>
+</section>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md89">
+<title>Hook Uninstallation</title>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md90">
+<title>Standard Uninstallation</title>
+
+<para>To remove a hook from the current repository:</para>
+
+<para><literallayout><computeroutput>penify&#32;docgen&#32;uninstall-hook
+</computeroutput></literallayout></para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md91">
+<title>Specific Repository Uninstallation</title>
+
+<para>To remove a hook from a specific repository:</para>
+
+<para><literallayout><computeroutput>penify&#32;docgen&#32;uninstall-hook&#32;-l&#32;/path/to/repo
+</computeroutput></literallayout></para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md92">
+<title>Manual Hook Removal</title>
+
+<para>If needed, you can manually remove the hook:</para>
+
+<para><literallayout><computeroutput>rm&#32;.git/hooks/post-commit
+</computeroutput></literallayout></para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md93">
+<title>Verifying Uninstallation</title>
+
+<para>Check that the hook was successfully removed:</para>
+
+<para><literallayout><computeroutput>ls&#32;-la&#32;.git/hooks/post-commit&#32;&#32;#&#32;Should&#32;return&#32;&quot;No&#32;such&#32;file&#32;or&#32;directory&quot;
+</computeroutput></literallayout></para>
+</section>
+</section>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md94">
+<title>Advanced Use Cases</title>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md95">
+<title>Continuous Integration</title>
+
+<para>Run documentation generation in CI pipelines:</para>
+
+<para><literallayout><computeroutput>#&#32;In&#32;your&#32;CI&#32;script
+export&#32;PENIFY_API_TOKEN=your_api_token
+penify&#32;docgen&#32;-l&#32;src/
+</computeroutput></literallayout></para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md96">
+<title>Batch Documentation</title>
+
+<para>Generate documentation for multiple repositories:</para>
+
+<para><literallayout><computeroutput>#&#32;Bash&#32;script&#32;for&#32;batch&#32;documentation
+for&#32;repo&#32;in&#32;repo1&#32;repo2&#32;repo3;&#32;do
+&#32;&#32;cd&#32;/path/to/$repo
+&#32;&#32;penify&#32;docgen&#32;-l&#32;.
+done
+</computeroutput></literallayout></para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md97">
+<title>Custom Git Hook Integration</title>
+
+<para>Integrate with other Git hooks:</para>
+
+<para><literallayout><computeroutput>#&#32;In&#32;.git/hooks/pre-push
+penify&#32;docgen&#32;-l&#32;src/
+</computeroutput></literallayout></para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md98">
+<title>Documenting Release Tags</title>
+
+<para>Generate documentation when creating a release tag:</para>
+
+<para><literallayout><computeroutput>#&#32;Document&#32;everything&#32;when&#32;creating&#32;a&#32;tag
+git&#32;tag&#32;-a&#32;v1.0.0
+penify&#32;docgen&#32;-l&#32;.&#32;&#32;#&#32;Document&#32;entire&#32;codebase
+git&#32;commit&#32;--amend&#32;-m&#32;&quot;Release&#32;v1.0.0&#32;with&#32;updated&#32;documentation&quot;
+</computeroutput></literallayout></para>
+</section>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md99">
+<title>Troubleshooting</title>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md100">
+<title>Common Issues</title>
+
+<para><orderedlist>
+<listitem>
+<para>**&quot;Authentication required&quot;**<itemizedlist>
+<listitem>
+<para>Run <computeroutput>penify login</computeroutput> before using documentation features</para>
+</listitem><listitem>
+<para>Check your API token with <computeroutput>cat ~/.penify</computeroutput></para>
+</listitem></itemizedlist>
+</para>
+</listitem><listitem>
+<para>**&quot;Permission denied when installing hook&quot;**<itemizedlist>
+<listitem>
+<para>Check Git repository permissions</para>
+</listitem><listitem>
+<para>Try running with sudo (if appropriate for your environment)</para>
+</listitem><listitem>
+<para>Ensure the <computeroutput>.git/hooks</computeroutput> directory exists</para>
+</listitem></itemizedlist>
+</para>
+</listitem><listitem>
+<para>**&quot;Hook installed but not running&quot;**<itemizedlist>
+<listitem>
+<para>Check if the hook is executable: <computeroutput>ls -la .git/hooks/post-commit</computeroutput></para>
+</listitem><listitem>
+<para>Make it executable if needed: <computeroutput>chmod +x .git/hooks/post-commit</computeroutput></para>
+</listitem><listitem>
+<para>Check for syntax errors in the hook script</para>
+</listitem></itemizedlist>
+</para>
+</listitem><listitem>
+<para>**&quot;File or directory not found&quot;**<itemizedlist>
+<listitem>
+<para>Verify the path provided to the <computeroutput>-l</computeroutput> option</para>
+</listitem><listitem>
+<para>Ensure you&apos;re running the command from the correct directory</para>
+</listitem></itemizedlist>
+</para>
+</listitem><listitem>
+<para>**&quot;Hook uninstallation failed&quot;**<itemizedlist>
+<listitem>
+<para>Check permissions on the <computeroutput>.git/hooks</computeroutput> directory</para>
+</listitem><listitem>
+<para>Try manual removal: <computeroutput>rm .git/hooks/post-commit</computeroutput></para>
+</listitem></itemizedlist>
+</para>
+</listitem></orderedlist>
+</para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md101">
+<title>Debugging</title>
+
+<para>For detailed output when running documentation commands:</para>
+
+<para><literallayout><computeroutput>export&#32;PENIFY_DEBUG=1
+penify&#32;docgen&#32;-l&#32;src/
+</computeroutput></literallayout></para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md102">
+<title>Getting Help</title>
+
+<para>For command-specific help:</para>
+
+<para><literallayout><computeroutput>penify&#32;docgen&#32;--help
+penify&#32;docgen&#32;install-hook&#32;--help
+penify&#32;docgen&#32;uninstall-hook&#32;--help
+</computeroutput></literallayout> </para>
+</section>
+</section>
+</section>
diff --git a/docs345/docbook/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows.xml b/docs345/docbook/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows.xml
new file mode 100644
index 0000000..5b1d157
--- /dev/null
+++ b/docs345/docbook/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows.xml
@@ -0,0 +1,209 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows" xml:lang="en-US">
+
+<para>This document demonstrates how to use Penify CLI in real-world development workflows to improve your productivity.</para>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md104">
+<title>Workflow 1: Efficient Git Commits with AI</title>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md105">
+<title>Setup</title>
+
+<para>First, configure your local LLM for offline operation:</para>
+
+<para><literallayout><computeroutput>penify&#32;config&#32;llm
+</computeroutput></literallayout></para>
+
+<para>Configure your JIRA integration for enhanced commit messages:</para>
+
+<para><literallayout><computeroutput>penify&#32;config&#32;jira
+</computeroutput></literallayout></para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md106">
+<title>Daily Workflow</title>
+
+<para><orderedlist>
+<listitem>
+<para>Make your code changes as usual</para>
+</listitem><listitem>
+<para>When ready to commit, use Penify to generate a smart commit message:</para>
+</listitem></orderedlist>
+</para>
+
+<para><literallayout><computeroutput>penify&#32;commit
+</computeroutput></literallayout></para>
+
+<para><orderedlist>
+<listitem>
+<para>Review and confirm the generated commit message</para>
+</listitem><listitem>
+<para>Git commit and push as usual</para>
+</listitem></orderedlist>
+</para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md107">
+<title>Benefits</title>
+
+<para><itemizedlist>
+<listitem>
+<para>Consistent and descriptive commit messages</para>
+</listitem><listitem>
+<para>Automatic inclusion of relevant JIRA ticket information</para>
+</listitem><listitem>
+<para>Time saved from writing detailed commit messages</para>
+</listitem></itemizedlist>
+</para>
+</section>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md108">
+<title>Workflow 2: Documentation Generation Pipeline</title>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md109">
+<title>Setup</title>
+
+<para>Login to Penify to access advanced documentation features:</para>
+
+<para><literallayout><computeroutput>penify&#32;login
+</computeroutput></literallayout></para>
+
+<para>Install the Git hook for automatic documentation generation:</para>
+
+<para><literallayout><computeroutput>penify&#32;docgen&#32;install-hook
+</computeroutput></literallayout></para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md110">
+<title>Daily Workflow</title>
+
+<para><orderedlist>
+<listitem>
+<para>Make your code changes as usual</para>
+</listitem><listitem>
+<para>Commit your changes</para>
+</listitem><listitem>
+<para>Documentation is automatically generated for changed files</para>
+</listitem><listitem>
+<para>Review the generated documentation</para>
+</listitem></orderedlist>
+</para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md111">
+<title>Manual Documentation</title>
+
+<para>For specific files or folders:</para>
+
+<para><literallayout><computeroutput>penify&#32;docgen&#32;-l&#32;src/components/authentication
+</computeroutput></literallayout></para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md112">
+<title>Benefits</title>
+
+<para><itemizedlist>
+<listitem>
+<para>Always up-to-date documentation</para>
+</listitem><listitem>
+<para>Consistent documentation style</para>
+</listitem><listitem>
+<para>Time saved from writing detailed documentation</para>
+</listitem></itemizedlist>
+</para>
+</section>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md113">
+<title>Workflow 3: Code Review Enhancement</title>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md114">
+<title>Setup</title>
+
+<para>Ensure you&apos;re logged into Penify:</para>
+
+<para><literallayout><computeroutput>penify&#32;login
+</computeroutput></literallayout></para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md115">
+<title>Workflow</title>
+
+<para><orderedlist>
+<listitem>
+<para>Before submitting a PR, generate documentation for changed files:</para>
+</listitem></orderedlist>
+</para>
+
+<para><literallayout><computeroutput>penify&#32;docgen
+</computeroutput></literallayout></para>
+
+<para><orderedlist>
+<listitem>
+<para>Include the generated documentation in your PR</para>
+</listitem><listitem>
+<para>Reviewers can better understand your changes with the AI-generated explanations</para>
+</listitem></orderedlist>
+</para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md116">
+<title>Benefits</title>
+
+<para><itemizedlist>
+<listitem>
+<para>Improved PR quality</para>
+</listitem><listitem>
+<para>Faster code reviews</para>
+</listitem><listitem>
+<para>Better team understanding of code changes</para>
+</listitem></itemizedlist>
+</para>
+</section>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md117">
+<title>Workflow 4: Onboarding New Team Members</title>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md118">
+<title>For Team Leads</title>
+
+<para>Generate comprehensive documentation for the entire codebase:</para>
+
+<para><literallayout><computeroutput>penify&#32;docgen&#32;-l&#32;.
+</computeroutput></literallayout></para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md119">
+<title>For New Team Members</title>
+
+<para>Generate focused documentation for components you&apos;re working on:</para>
+
+<para><literallayout><computeroutput>penify&#32;docgen&#32;-l&#32;src/components/my-feature
+</computeroutput></literallayout></para>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md120">
+<title>Benefits</title>
+
+<para><itemizedlist>
+<listitem>
+<para>Faster onboarding</para>
+</listitem><listitem>
+<para>Better understanding of code structure</para>
+</listitem><listitem>
+<para>Reduced questions to senior team members</para>
+</listitem></itemizedlist>
+</para>
+</section>
+</section>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md121">
+<title>Workflow 5: Legacy Code Understanding</title>
+
+<para>When working with unfamiliar legacy code:</para>
+
+<para><literallayout><computeroutput>#&#32;Document&#32;a&#32;specific&#32;complex&#32;file
+penify&#32;docgen&#32;-l&#32;src/legacy/complex_module.py
+
+#&#32;Document&#32;an&#32;entire&#32;legacy&#32;component
+penify&#32;docgen&#32;-l&#32;src/legacy/old_component
+</computeroutput></literallayout></para>
+<section xml:id="_md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md122">
+<title>Benefits</title>
+
+<para><itemizedlist>
+<listitem>
+<para>Quickly understand complex legacy systems</para>
+</listitem><listitem>
+<para>Reduce time spent deciphering undocumented code</para>
+</listitem><listitem>
+<para>Make safer changes to legacy systems </para>
+</listitem></itemizedlist>
+</para>
+</section>
+</section>
+</section>
diff --git a/docs345/docbook/namespacepenify__hook.xml b/docs345/docbook/namespacepenify__hook.xml
new file mode 100644
index 0000000..69e0b8e
--- /dev/null
+++ b/docs345/docbook/namespacepenify__hook.xml
@@ -0,0 +1,40 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_namespacepenify__hook" xml:lang="en-US">
+<title>penify_hook Namespace Reference</title>
+<indexterm><primary>penify_hook</primary></indexterm>
+<simplesect>
+    <title>Namespaces    </title>
+        <itemizedlist>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook_1_1api__client">api_client</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook_1_1base__analyzer">base_analyzer</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook_1_1commands">commands</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook_1_1commit__analyzer">commit_analyzer</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook_1_1config__command">config_command</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook_1_1constants">constants</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook_1_1file__analyzer">file_analyzer</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook_1_1folder__analyzer">folder_analyzer</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook_1_1git__analyzer">git_analyzer</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook_1_1jira__client">jira_client</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook_1_1llm__client">llm_client</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook_1_1login__command">login_command</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook_1_1main">main</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook_1_1ui__utils">ui_utils</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook_1_1utils">utils</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+</section>
diff --git a/docs345/docbook/namespacepenify__hook_1_1api__client.xml b/docs345/docbook/namespacepenify__hook_1_1api__client.xml
new file mode 100644
index 0000000..dcc79df
--- /dev/null
+++ b/docs345/docbook/namespacepenify__hook_1_1api__client.xml
@@ -0,0 +1,12 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_namespacepenify__hook_1_1api__client" xml:lang="en-US">
+<title>penify_hook.api_client Namespace Reference</title>
+<indexterm><primary>penify_hook.api_client</primary></indexterm>
+<simplesect>
+    <title>Classes    </title>
+        <itemizedlist>
+            <listitem><para>class <link linkend="_classpenify__hook_1_1api__client_1_1APIClient">APIClient</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+</section>
diff --git a/docs345/docbook/namespacepenify__hook_1_1base__analyzer.xml b/docs345/docbook/namespacepenify__hook_1_1base__analyzer.xml
new file mode 100644
index 0000000..890dfdc
--- /dev/null
+++ b/docs345/docbook/namespacepenify__hook_1_1base__analyzer.xml
@@ -0,0 +1,12 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_namespacepenify__hook_1_1base__analyzer" xml:lang="en-US">
+<title>penify_hook.base_analyzer Namespace Reference</title>
+<indexterm><primary>penify_hook.base_analyzer</primary></indexterm>
+<simplesect>
+    <title>Classes    </title>
+        <itemizedlist>
+            <listitem><para>class <link linkend="_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer">BaseAnalyzer</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+</section>
diff --git a/docs345/docbook/namespacepenify__hook_1_1commands.xml b/docs345/docbook/namespacepenify__hook_1_1commands.xml
new file mode 100644
index 0000000..8724992
--- /dev/null
+++ b/docs345/docbook/namespacepenify__hook_1_1commands.xml
@@ -0,0 +1,20 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_namespacepenify__hook_1_1commands" xml:lang="en-US">
+<title>penify_hook.commands Namespace Reference</title>
+<indexterm><primary>penify_hook.commands</primary></indexterm>
+<simplesect>
+    <title>Namespaces    </title>
+        <itemizedlist>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook_1_1commands_1_1auth__commands">auth_commands</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook_1_1commands_1_1commit__commands">commit_commands</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook_1_1commands_1_1config__commands">config_commands</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook_1_1commands_1_1doc__commands">doc_commands</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook_1_1commands_1_1hook__commands">hook_commands</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+</section>
diff --git a/docs345/docbook/namespacepenify__hook_1_1commands_1_1auth__commands.xml b/docs345/docbook/namespacepenify__hook_1_1commands_1_1auth__commands.xml
new file mode 100644
index 0000000..f868f3d
--- /dev/null
+++ b/docs345/docbook/namespacepenify__hook_1_1commands_1_1auth__commands.xml
@@ -0,0 +1,90 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_namespacepenify__hook_1_1commands_1_1auth__commands" xml:lang="en-US">
+<title>penify_hook.commands.auth_commands Namespace Reference</title>
+<indexterm><primary>penify_hook.commands.auth_commands</primary></indexterm>
+<simplesect>
+    <title>Functions    </title>
+        <itemizedlist>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1commands_1_1auth__commands_1aa3956ca1749d4218ea1dc6e5b6218b24">save_credentials</link> (api_key)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1commands_1_1auth__commands_1a78f375c58bb6f69f98675e6a9ac84655">login</link> (api_url, dashboard_url)</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<section>
+<title>Function Documentation</title>
+<anchor xml:id="_namespacepenify__hook_1_1commands_1_1auth__commands_1a78f375c58bb6f69f98675e6a9ac84655"/><section>
+    <title>login()</title>
+<indexterm><primary>login</primary><secondary>penify_hook.commands.auth_commands</secondary></indexterm>
+<indexterm><primary>penify_hook.commands.auth_commands</primary><secondary>login</secondary></indexterm>
+<para><computeroutput>def penify_hook.commands.auth_commands.login ( api_url,  dashboard_url)</computeroutput></para>
+<para><literallayout><computeroutput>Open the login page in a web browser and listen for the redirect URL to
+capture the token.
+
+This function generates a random redirect port, constructs the full
+login URL with the provided dashboard URL, opens the login page in the
+default web browser, and sets up a simple HTTP server to listen for the
+redirect. Upon receiving the redirect, it extracts the token from the
+query parameters, fetches API keys using the token, saves them if
+successful, and handles login failures by notifying the user.
+
+Args:
+    api_url (str): The URL of the API service to fetch API keys.
+    dashboard_url (str): The URL of the dashboard where the user will be redirected after logging
+        in.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1commands_1_1auth__commands_a78f375c58bb6f69f98675e6a9ac84655_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1commands_1_1auth__commands_a78f375c58bb6f69f98675e6a9ac84655_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_namespacepenify__hook_1_1commands_1_1auth__commands_1aa3956ca1749d4218ea1dc6e5b6218b24"/><section>
+    <title>save_credentials()</title>
+<indexterm><primary>save_credentials</primary><secondary>penify_hook.commands.auth_commands</secondary></indexterm>
+<indexterm><primary>penify_hook.commands.auth_commands</primary><secondary>save_credentials</secondary></indexterm>
+<para><computeroutput>def penify_hook.commands.auth_commands.save_credentials ( api_key)</computeroutput></para>
+<para><literallayout><computeroutput>Save the token and API keys based on priority:
+1. .env file in Git repo root (if in a git repo)
+2. .penify file in home directory (global fallback)
+
+Args:
+    api_key: The API key to save
+    
+Returns:
+    bool: True if saved successfully, False otherwise
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1commands_1_1auth__commands_aa3956ca1749d4218ea1dc6e5b6218b24_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1commands_1_1auth__commands_aa3956ca1749d4218ea1dc6e5b6218b24_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+</section>
+</section>
diff --git a/docs345/docbook/namespacepenify__hook_1_1commands_1_1auth__commands_a78f375c58bb6f69f98675e6a9ac84655_cgraph.md5 b/docs345/docbook/namespacepenify__hook_1_1commands_1_1auth__commands_a78f375c58bb6f69f98675e6a9ac84655_cgraph.md5
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diff --git a/docs345/docbook/namespacepenify__hook_1_1commands_1_1commit__commands.xml b/docs345/docbook/namespacepenify__hook_1_1commands_1_1commit__commands.xml
new file mode 100644
index 0000000..ae59eb4
--- /dev/null
+++ b/docs345/docbook/namespacepenify__hook_1_1commands_1_1commit__commands.xml
@@ -0,0 +1,133 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_namespacepenify__hook_1_1commands_1_1commit__commands" xml:lang="en-US">
+<title>penify_hook.commands.commit_commands Namespace Reference</title>
+<indexterm><primary>penify_hook.commands.commit_commands</primary></indexterm>
+<simplesect>
+    <title>Functions    </title>
+        <itemizedlist>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1commands_1_1commit__commands_1a62564c4e8ad59fc46d56cb0f9122a71a">commit_code</link> (api_url, token, message, open_terminal, generate_description, llm_model=None, llm_api_base=None, llm_api_key=None, jira_url=None, jira_user=None, jira_api_token=None)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1commands_1_1commit__commands_1a8627583116eb78e31a4d3cdc16d2f15c">setup_commit_parser</link> (parser)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1commands_1_1commit__commands_1af4f739f524c38b437e4e47673d683e23">handle_commit</link> (args)</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<section>
+<title>Function Documentation</title>
+<anchor xml:id="_namespacepenify__hook_1_1commands_1_1commit__commands_1a62564c4e8ad59fc46d56cb0f9122a71a"/><section>
+    <title>commit_code()</title>
+<indexterm><primary>commit_code</primary><secondary>penify_hook.commands.commit_commands</secondary></indexterm>
+<indexterm><primary>penify_hook.commands.commit_commands</primary><secondary>commit_code</secondary></indexterm>
+<para><computeroutput>def penify_hook.commands.commit_commands.commit_code ( api_url,  token,  message,  open_terminal,  generate_description,  llm_model = <computeroutput>None</computeroutput>
+,  llm_api_base = <computeroutput>None</computeroutput>
+,  llm_api_key = <computeroutput>None</computeroutput>
+,  jira_url = <computeroutput>None</computeroutput>
+,  jira_user = <computeroutput>None</computeroutput>
+,  jira_api_token = <computeroutput>None</computeroutput>
+)</computeroutput></para>
+<para><literallayout><computeroutput>Enhance Git commits with AI-powered commit messages.
+
+This function allows for the generation of enhanced commit messages
+using natural language processing models and optionally integrates with
+JIRA for additional context. It processes the current Git folder to find
+relevant files and generates a detailed commit message based on the
+provided parameters.
+
+Args:
+    api_url (str): URL of the API endpoint.
+    token (str): Authentication token for the API.
+    message (str): Initial commit message provided by the user.
+    open_terminal (bool): Whether to open the terminal after committing.
+    generate_description (bool): Whether to generate a detailed description in the commit message.
+    llm_model (str?): The language model to use for generating the commit message. Defaults to
+        None.
+    llm_api_base (str?): Base URL of the LLM API. Defaults to None.
+    llm_api_key (str?): API key for accessing the LLM service. Defaults to None.
+    jira_url (str?): URL of the JIRA instance. Defaults to None.
+    jira_user (str?): Username for authenticating with JIRA. Defaults to None.
+    jira_api_token (str?): API token for accessing JIRA. Defaults to None.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1commands_1_1commit__commands_a62564c4e8ad59fc46d56cb0f9122a71a_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1commands_1_1commit__commands_a62564c4e8ad59fc46d56cb0f9122a71a_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_namespacepenify__hook_1_1commands_1_1commit__commands_1af4f739f524c38b437e4e47673d683e23"/><section>
+    <title>handle_commit()</title>
+<indexterm><primary>handle_commit</primary><secondary>penify_hook.commands.commit_commands</secondary></indexterm>
+<indexterm><primary>penify_hook.commands.commit_commands</primary><secondary>handle_commit</secondary></indexterm>
+<para><computeroutput>def penify_hook.commands.commit_commands.handle_commit ( args)</computeroutput></para>
+<para><literallayout><computeroutput>Handle the commit functionality by processing arguments and invoking the
+appropriate commands.
+
+This function processes the provided command-line arguments to configure
+settings for commit operations, including LLM (Language Model) and Jira
+configurations. It then calls the `commit_code` function with these
+configurations to perform the actual commit operation.
+
+Args:
+    args (argparse.Namespace): The parsed command-line arguments containing options like terminal,
+        description, message, etc.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1commands_1_1commit__commands_af4f739f524c38b437e4e47673d683e23_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1commands_1_1commit__commands_af4f739f524c38b437e4e47673d683e23_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_namespacepenify__hook_1_1commands_1_1commit__commands_1a8627583116eb78e31a4d3cdc16d2f15c"/><section>
+    <title>setup_commit_parser()</title>
+<indexterm><primary>setup_commit_parser</primary><secondary>penify_hook.commands.commit_commands</secondary></indexterm>
+<indexterm><primary>penify_hook.commands.commit_commands</primary><secondary>setup_commit_parser</secondary></indexterm>
+<para><computeroutput>def penify_hook.commands.commit_commands.setup_commit_parser ( parser)</computeroutput></para>
+<para><literallayout><computeroutput>Generates a parser for setting up a command to generate smart commit
+messages.
+
+This function sets up an argument parser that can be used to generate
+commit messages with contextual information. It allows users to specify
+options such as including a message, opening an edit terminal before
+committing, and generating a detailed commit message.
+
+Args:
+    parser (argparse.ArgumentParser): The ArgumentParser object to be configured.
+</computeroutput></literallayout> </para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1commands_1_1commit__commands_a8627583116eb78e31a4d3cdc16d2f15c_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+</section>
+</section>
diff --git a/docs345/docbook/namespacepenify__hook_1_1commands_1_1commit__commands_a62564c4e8ad59fc46d56cb0f9122a71a_cgraph.md5 b/docs345/docbook/namespacepenify__hook_1_1commands_1_1commit__commands_a62564c4e8ad59fc46d56cb0f9122a71a_cgraph.md5
new file mode 100644
index 0000000..f0df322
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+++ b/docs345/docbook/namespacepenify__hook_1_1commands_1_1config__commands.xml
@@ -0,0 +1,364 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_namespacepenify__hook_1_1commands_1_1config__commands" xml:lang="en-US">
+<title>penify_hook.commands.config_commands Namespace Reference</title>
+<indexterm><primary>penify_hook.commands.config_commands</primary></indexterm>
+<simplesect>
+    <title>Functions    </title>
+        <itemizedlist>
+            <listitem><para>None <link linkend="_namespacepenify__hook_1_1commands_1_1config__commands_1aabe277132ce0bc0aacef951cf1dee2ae">load_env_files</link> ()</para>
+</listitem>
+            <listitem><para>Path <link linkend="_namespacepenify__hook_1_1commands_1_1config__commands_1a6559a82d0bf727703d550d1003d3ed20">get_penify_config</link> ()</para>
+</listitem>
+            <listitem><para>Any <link linkend="_namespacepenify__hook_1_1commands_1_1config__commands_1a3caf2b062dd33b1f1d7ddc7224f0ff87">get_env_var_or_default</link> (str env_var, Any default=None)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1commands_1_1config__commands_1a4617bc5956e502c9555dc0dda0376df4">save_llm_config</link> (model, api_base, api_key)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1commands_1_1config__commands_1ab2486ac2bf16b4a671e49625bfa4f9b4">save_jira_config</link> (url, username, api_token)</para>
+</listitem>
+            <listitem><para>Dict[str, str] <link linkend="_namespacepenify__hook_1_1commands_1_1config__commands_1a6492bc8e7df6e38bb06ad05e572d4cc0">get_llm_config</link> ()</para>
+</listitem>
+            <listitem><para>Dict[str, str] <link linkend="_namespacepenify__hook_1_1commands_1_1config__commands_1a15bf3685c4dcb5c15ba6a4055e484cf2">get_jira_config</link> ()</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1commands_1_1config__commands_1a185dfc34a655ed80e6c95939b6f3c35c">config_llm_web</link> ()</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1commands_1_1config__commands_1af115198ea5d6808ccb98733957f50b06">config_jira_web</link> ()</para>
+</listitem>
+            <listitem><para>Optional[str] <link linkend="_namespacepenify__hook_1_1commands_1_1config__commands_1a5503d51c905e2f1b299b12d2a73bd812">get_token</link> ()</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Variables    </title>
+        <itemizedlist>
+            <listitem><para>bool <link linkend="_namespacepenify__hook_1_1commands_1_1config__commands_1a152642ab83cf6219b604bda6122aba67">DOTENV_AVAILABLE</link> = True</para>
+</listitem>
+            <listitem><para><link linkend="_namespacepenify__hook_1_1commands_1_1config__commands_1a4b202072a3a3b8515c9c254622e9c880">path</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<section>
+<title>Function Documentation</title>
+<anchor xml:id="_namespacepenify__hook_1_1commands_1_1config__commands_1af115198ea5d6808ccb98733957f50b06"/><section>
+    <title>config_jira_web()</title>
+<indexterm><primary>config_jira_web</primary><secondary>penify_hook.commands.config_commands</secondary></indexterm>
+<indexterm><primary>penify_hook.commands.config_commands</primary><secondary>config_jira_web</secondary></indexterm>
+<para><computeroutput>def penify_hook.commands.config_commands.config_jira_web ( )</computeroutput></para>
+<para><literallayout><computeroutput>Open a web browser interface for configuring JIRA settings.
+
+This function sets up a simple HTTP server using Python&apos;s built-in
+`http.server` module to handle GET and POST requests. The server serves
+an HTML page for configuration and handles saving the JIRA configuration
+details through API tokens and URLs. Upon successful configuration, it
+shuts down the server gracefully.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1commands_1_1config__commands_af115198ea5d6808ccb98733957f50b06_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1commands_1_1config__commands_af115198ea5d6808ccb98733957f50b06_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_namespacepenify__hook_1_1commands_1_1config__commands_1a185dfc34a655ed80e6c95939b6f3c35c"/><section>
+    <title>config_llm_web()</title>
+<indexterm><primary>config_llm_web</primary><secondary>penify_hook.commands.config_commands</secondary></indexterm>
+<indexterm><primary>penify_hook.commands.config_commands</primary><secondary>config_llm_web</secondary></indexterm>
+<para><computeroutput>def penify_hook.commands.config_commands.config_llm_web ( )</computeroutput></para>
+<para><literallayout><computeroutput>Open a web browser interface for configuring LLM settings.
+
+This function starts a temporary HTTP server that serves an HTML
+template for configuring Large Language Model (LLM) settings. It handles
+GET and POST requests to retrieve the current configuration, save new
+configurations, and suppress log messages.  The server runs on a random
+port between 30000 and 50000, and it is accessible via a URL like
+http://localhost:&lt;redirect_port&gt;. The function opens this URL in the
+default web browser for configuration. Once configured, the server shuts
+down.
+</computeroutput></literallayout> </para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1commands_1_1config__commands_a185dfc34a655ed80e6c95939b6f3c35c_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_namespacepenify__hook_1_1commands_1_1config__commands_1a3caf2b062dd33b1f1d7ddc7224f0ff87"/><section>
+    <title>get_env_var_or_default()</title>
+<indexterm><primary>get_env_var_or_default</primary><secondary>penify_hook.commands.config_commands</secondary></indexterm>
+<indexterm><primary>penify_hook.commands.config_commands</primary><secondary>get_env_var_or_default</secondary></indexterm>
+<para><computeroutput> Any penify_hook.commands.config_commands.get_env_var_or_default (str env_var, Any  default = <computeroutput>None</computeroutput>
+)</computeroutput></para>
+<para><literallayout><computeroutput>Get environment variable or return default value.
+
+Args:
+    env_var: The environment variable name
+    default: Default value if environment variable is not set
+    
+Returns:
+    Value of the environment variable or default
+</computeroutput></literallayout> </para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1commands_1_1config__commands_a3caf2b062dd33b1f1d7ddc7224f0ff87_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_namespacepenify__hook_1_1commands_1_1config__commands_1a15bf3685c4dcb5c15ba6a4055e484cf2"/><section>
+    <title>get_jira_config()</title>
+<indexterm><primary>get_jira_config</primary><secondary>penify_hook.commands.config_commands</secondary></indexterm>
+<indexterm><primary>penify_hook.commands.config_commands</primary><secondary>get_jira_config</secondary></indexterm>
+<para><computeroutput> Dict[str, str] penify_hook.commands.config_commands.get_jira_config ( )</computeroutput></para>
+<para><literallayout><computeroutput>Get JIRA configuration from environment variables.
+
+Environment variables:
+- PENIFY_JIRA_URL: JIRA URL
+- PENIFY_JIRA_USER: JIRA username
+- PENIFY_JIRA_TOKEN: JIRA API token
+
+Returns:
+    dict: Configuration dictionary with url, username, and api_token
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1commands_1_1config__commands_a15bf3685c4dcb5c15ba6a4055e484cf2_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1commands_1_1config__commands_a15bf3685c4dcb5c15ba6a4055e484cf2_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_namespacepenify__hook_1_1commands_1_1config__commands_1a6492bc8e7df6e38bb06ad05e572d4cc0"/><section>
+    <title>get_llm_config()</title>
+<indexterm><primary>get_llm_config</primary><secondary>penify_hook.commands.config_commands</secondary></indexterm>
+<indexterm><primary>penify_hook.commands.config_commands</primary><secondary>get_llm_config</secondary></indexterm>
+<para><computeroutput> Dict[str, str] penify_hook.commands.config_commands.get_llm_config ( )</computeroutput></para>
+<para><literallayout><computeroutput>Get LLM configuration from environment variables.
+
+Environment variables:
+- PENIFY_LLM_MODEL: Model name
+- PENIFY_LLM_API_BASE: API base URL
+- PENIFY_LLM_API_KEY: API key
+
+Returns:
+    dict: Configuration dictionary with model, api_base, and api_key
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1commands_1_1config__commands_a6492bc8e7df6e38bb06ad05e572d4cc0_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1commands_1_1config__commands_a6492bc8e7df6e38bb06ad05e572d4cc0_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_namespacepenify__hook_1_1commands_1_1config__commands_1a6559a82d0bf727703d550d1003d3ed20"/><section>
+    <title>get_penify_config()</title>
+<indexterm><primary>get_penify_config</primary><secondary>penify_hook.commands.config_commands</secondary></indexterm>
+<indexterm><primary>penify_hook.commands.config_commands</primary><secondary>get_penify_config</secondary></indexterm>
+<para><computeroutput> Path penify_hook.commands.config_commands.get_penify_config ( )</computeroutput></para>
+<para><literallayout><computeroutput>Get the home directory for the .penify configuration file.
+
+This function searches for the `.penify` file in the current directory
+and its parent directories until it finds it or reaches the home
+directory. If not found, it creates the `.penify` directory and an empty
+`config.json` file.
+
+Returns:
+    Path: The path to the `config.json` file within the `.penify` directory.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1commands_1_1config__commands_a6559a82d0bf727703d550d1003d3ed20_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1commands_1_1config__commands_a6559a82d0bf727703d550d1003d3ed20_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_namespacepenify__hook_1_1commands_1_1config__commands_1a5503d51c905e2f1b299b12d2a73bd812"/><section>
+    <title>get_token()</title>
+<indexterm><primary>get_token</primary><secondary>penify_hook.commands.config_commands</secondary></indexterm>
+<indexterm><primary>penify_hook.commands.config_commands</primary><secondary>get_token</secondary></indexterm>
+<para><computeroutput> Optional[str] penify_hook.commands.config_commands.get_token ( )</computeroutput></para>
+<para><literallayout><computeroutput>Get the API token based on priority:
+1. Environment variable PENIFY_API_TOKEN from any .env file
+2. Config file &apos;api_keys&apos; value
+
+Returns:
+    str or None: API token if found, None otherwise
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1commands_1_1config__commands_a5503d51c905e2f1b299b12d2a73bd812_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1commands_1_1config__commands_a5503d51c905e2f1b299b12d2a73bd812_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_namespacepenify__hook_1_1commands_1_1config__commands_1aabe277132ce0bc0aacef951cf1dee2ae"/><section>
+    <title>load_env_files()</title>
+<indexterm><primary>load_env_files</primary><secondary>penify_hook.commands.config_commands</secondary></indexterm>
+<indexterm><primary>penify_hook.commands.config_commands</primary><secondary>load_env_files</secondary></indexterm>
+<para><computeroutput> None penify_hook.commands.config_commands.load_env_files ( )</computeroutput></para>
+<para><literallayout><computeroutput>Load environment variables from .env files in various locations,
+with proper priority (later files override earlier ones):
+1. User home directory .env (lowest priority)
+2. Git repo root directory .env (if in a git repo)
+3. Current directory .env (highest priority)
+
+This function is called when the module is imported, ensuring env variables
+are available throughout the application lifecycle.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1commands_1_1config__commands_aabe277132ce0bc0aacef951cf1dee2ae_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1commands_1_1config__commands_aabe277132ce0bc0aacef951cf1dee2ae_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_namespacepenify__hook_1_1commands_1_1config__commands_1ab2486ac2bf16b4a671e49625bfa4f9b4"/><section>
+    <title>save_jira_config()</title>
+<indexterm><primary>save_jira_config</primary><secondary>penify_hook.commands.config_commands</secondary></indexterm>
+<indexterm><primary>penify_hook.commands.config_commands</primary><secondary>save_jira_config</secondary></indexterm>
+<para><computeroutput>def penify_hook.commands.config_commands.save_jira_config ( url,  username,  api_token)</computeroutput></para>
+<para><literallayout><computeroutput>Save JIRA configuration settings to .env file.
+
+This function saves JIRA configuration in the following priority:
+1. Git repo root .env (if inside a git repo)
+2. User home directory .env
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1commands_1_1config__commands_ab2486ac2bf16b4a671e49625bfa4f9b4_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1commands_1_1config__commands_ab2486ac2bf16b4a671e49625bfa4f9b4_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_namespacepenify__hook_1_1commands_1_1config__commands_1a4617bc5956e502c9555dc0dda0376df4"/><section>
+    <title>save_llm_config()</title>
+<indexterm><primary>save_llm_config</primary><secondary>penify_hook.commands.config_commands</secondary></indexterm>
+<indexterm><primary>penify_hook.commands.config_commands</primary><secondary>save_llm_config</secondary></indexterm>
+<para><computeroutput>def penify_hook.commands.config_commands.save_llm_config ( model,  api_base,  api_key)</computeroutput></para>
+<para><literallayout><computeroutput>Save LLM configuration settings to .env file.
+
+This function saves LLM configuration in the following priority:
+1. Git repo root .env (if inside a git repo)
+2. User home directory .env
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1commands_1_1config__commands_a4617bc5956e502c9555dc0dda0376df4_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1commands_1_1config__commands_a4617bc5956e502c9555dc0dda0376df4_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+</section>
+<section>
+<title>Variable Documentation</title>
+<anchor xml:id="_namespacepenify__hook_1_1commands_1_1config__commands_1a152642ab83cf6219b604bda6122aba67"/><section>
+    <title>DOTENV_AVAILABLE</title>
+<indexterm><primary>DOTENV_AVAILABLE</primary><secondary>penify_hook.commands.config_commands</secondary></indexterm>
+<indexterm><primary>penify_hook.commands.config_commands</primary><secondary>DOTENV_AVAILABLE</secondary></indexterm>
+<para><computeroutput>bool penify_hook.commands.config_commands.DOTENV_AVAILABLE = True</computeroutput></para></section>
+<anchor xml:id="_namespacepenify__hook_1_1commands_1_1config__commands_1a4b202072a3a3b8515c9c254622e9c880"/><section>
+    <title>path</title>
+<indexterm><primary>path</primary><secondary>penify_hook.commands.config_commands</secondary></indexterm>
+<indexterm><primary>penify_hook.commands.config_commands</primary><secondary>path</secondary></indexterm>
+<para><computeroutput>penify_hook.commands.config_commands.path</computeroutput></para></section>
+</section>
+</section>
diff --git a/docs345/docbook/namespacepenify__hook_1_1commands_1_1config__commands_a15bf3685c4dcb5c15ba6a4055e484cf2_cgraph.md5 b/docs345/docbook/namespacepenify__hook_1_1commands_1_1config__commands_a15bf3685c4dcb5c15ba6a4055e484cf2_cgraph.md5
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+168858f3e9d4759f99db4c52c229e797
\ No newline at end of file
diff --git a/docs345/docbook/namespacepenify__hook_1_1commands_1_1config__commands_a15bf3685c4dcb5c15ba6a4055e484cf2_cgraph.svg b/docs345/docbook/namespacepenify__hook_1_1commands_1_1config__commands_a15bf3685c4dcb5c15ba6a4055e484cf2_cgraph.svg
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@@ -0,0 +1,84 @@
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diff --git a/docs345/docbook/namespacepenify__hook_1_1commands_1_1doc__commands.xml b/docs345/docbook/namespacepenify__hook_1_1commands_1_1doc__commands.xml
new file mode 100644
index 0000000..681ce86
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+++ b/docs345/docbook/namespacepenify__hook_1_1commands_1_1doc__commands.xml
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+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_namespacepenify__hook_1_1commands_1_1doc__commands" xml:lang="en-US">
+<title>penify_hook.commands.doc_commands Namespace Reference</title>
+<indexterm><primary>penify_hook.commands.doc_commands</primary></indexterm>
+<simplesect>
+    <title>Functions    </title>
+        <itemizedlist>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1commands_1_1doc__commands_1a4daac68bc563432bf25c85dc78081a25">generate_doc</link> (api_url, token, location=None)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1commands_1_1doc__commands_1acc7f4ead1b11951d885fa5c151c2cbe0">setup_docgen_parser</link> (parser)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1commands_1_1doc__commands_1a2006ab13bff718ef783868a910c0b704">handle_docgen</link> (args)</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Variables    </title>
+        <itemizedlist>
+            <listitem><para>string <link linkend="_namespacepenify__hook_1_1commands_1_1doc__commands_1a3e42540047da37565afffeaf106cb948">docgen_description</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<section>
+<title>Function Documentation</title>
+<anchor xml:id="_namespacepenify__hook_1_1commands_1_1doc__commands_1a4daac68bc563432bf25c85dc78081a25"/><section>
+    <title>generate_doc()</title>
+<indexterm><primary>generate_doc</primary><secondary>penify_hook.commands.doc_commands</secondary></indexterm>
+<indexterm><primary>penify_hook.commands.doc_commands</primary><secondary>generate_doc</secondary></indexterm>
+<para><computeroutput>def penify_hook.commands.doc_commands.generate_doc ( api_url,  token,  location = <computeroutput>None</computeroutput>
+)</computeroutput></para>
+<para><literallayout><computeroutput>Generates documentation based on the given parameters.
+
+This function initializes an API client using the provided API URL and
+token. It then generates documentation by analyzing the specified
+location, which can be a folder, a file, or the current working
+directory if no location is provided. The function handles different
+types of analysis based on the input location and reports any errors
+encountered during the process.
+
+Args:
+    api_url (str): The URL of the API to connect to for documentation generation.
+    token (str): The authentication token for accessing the API.
+    location (str?): The path to a specific file or folder to analyze. If not provided, the
+        current working directory is used.
+</computeroutput></literallayout> </para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1commands_1_1doc__commands_a4daac68bc563432bf25c85dc78081a25_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_namespacepenify__hook_1_1commands_1_1doc__commands_1a2006ab13bff718ef783868a910c0b704"/><section>
+    <title>handle_docgen()</title>
+<indexterm><primary>handle_docgen</primary><secondary>penify_hook.commands.doc_commands</secondary></indexterm>
+<indexterm><primary>penify_hook.commands.doc_commands</primary><secondary>handle_docgen</secondary></indexterm>
+<para><computeroutput>def penify_hook.commands.doc_commands.handle_docgen ( args)</computeroutput></para>
+<para><literallayout><computeroutput>Handle various subcommands related to document generation and hook
+management.
+
+This function processes different subcommands such as installing or
+uninstalling git hooks, and directly generating documentation based on
+provided arguments.
+
+Args:
+    args (Namespace): Parsed command-line arguments containing the subcommand and location
+        details.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1commands_1_1doc__commands_a2006ab13bff718ef783868a910c0b704_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1commands_1_1doc__commands_a2006ab13bff718ef783868a910c0b704_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_namespacepenify__hook_1_1commands_1_1doc__commands_1acc7f4ead1b11951d885fa5c151c2cbe0"/><section>
+    <title>setup_docgen_parser()</title>
+<indexterm><primary>setup_docgen_parser</primary><secondary>penify_hook.commands.doc_commands</secondary></indexterm>
+<indexterm><primary>penify_hook.commands.doc_commands</primary><secondary>setup_docgen_parser</secondary></indexterm>
+<para><computeroutput>def penify_hook.commands.doc_commands.setup_docgen_parser ( parser)</computeroutput></para>
+<para><literallayout><computeroutput>Set up and configure a parser for documentation generation using Git
+commands.
+
+This function configures a parser with various subcommands and arguments
+necessary for generating documentation for Git diffs, files, or folders.
+It also installs and uninstalls commit hooks to automate documentation
+generation on commits.
+
+Args:
+    parser (argparse.ArgumentParser): The parser to configure.
+</computeroutput></literallayout> </para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1commands_1_1doc__commands_acc7f4ead1b11951d885fa5c151c2cbe0_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+</section>
+<section>
+<title>Variable Documentation</title>
+<anchor xml:id="_namespacepenify__hook_1_1commands_1_1doc__commands_1a3e42540047da37565afffeaf106cb948"/><section>
+    <title>docgen_description</title>
+<indexterm><primary>docgen_description</primary><secondary>penify_hook.commands.doc_commands</secondary></indexterm>
+<indexterm><primary>penify_hook.commands.doc_commands</primary><secondary>docgen_description</secondary></indexterm>
+<para><computeroutput>string penify_hook.commands.doc_commands.docgen_description</computeroutput></para><emphasis role="strong">Initial value:</emphasis><programlisting linenumbering="unnumbered">1 =&#32;&#32;<emphasis role="stringliteral">&quot;&quot;&quot;Generate&#32;code&#32;documentation&#32;using&#32;Penify.</emphasis>
+2 <emphasis role="stringliteral"></emphasis>
+3 <emphasis role="stringliteral">This&#32;command&#32;requires&#32;you&#32;to&#32;be&#32;logged&#32;in&#32;to&#32;your&#32;Penify&#32;account.</emphasis>
+4 <emphasis role="stringliteral">You&#32;can&#32;generate&#32;documentation&#32;for:</emphasis>
+5 <emphasis role="stringliteral">-&#32;Current&#32;Git&#32;diff&#32;(default)</emphasis>
+6 <emphasis role="stringliteral">-&#32;Specific&#32;file</emphasis>
+7 <emphasis role="stringliteral">-&#32;Specific&#32;folder</emphasis>
+8 <emphasis role="stringliteral">&quot;&quot;&quot;</emphasis>
+</programlisting></section>
+</section>
+</section>
diff --git a/docs345/docbook/namespacepenify__hook_1_1commands_1_1doc__commands_a2006ab13bff718ef783868a910c0b704_cgraph.md5 b/docs345/docbook/namespacepenify__hook_1_1commands_1_1doc__commands_a2006ab13bff718ef783868a910c0b704_cgraph.md5
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diff --git a/docs345/docbook/namespacepenify__hook_1_1commands_1_1hook__commands.xml b/docs345/docbook/namespacepenify__hook_1_1commands_1_1hook__commands.xml
new file mode 100644
index 0000000..3402982
--- /dev/null
+++ b/docs345/docbook/namespacepenify__hook_1_1commands_1_1hook__commands.xml
@@ -0,0 +1,94 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_namespacepenify__hook_1_1commands_1_1hook__commands" xml:lang="en-US">
+<title>penify_hook.commands.hook_commands Namespace Reference</title>
+<indexterm><primary>penify_hook.commands.hook_commands</primary></indexterm>
+<simplesect>
+    <title>Functions    </title>
+        <itemizedlist>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1commands_1_1hook__commands_1adff8f5d3bf1c3795974a391ee95b72b2">install_git_hook</link> (location, token)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1commands_1_1hook__commands_1a81543eb5fa835fd1237f24e8bce6201d">uninstall_git_hook</link> (location)</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Variables    </title>
+        <itemizedlist>
+            <listitem><para>string <link linkend="_namespacepenify__hook_1_1commands_1_1hook__commands_1ae82fd46e5a9219da1478b0476b8214b1">HOOK_FILENAME</link> = &quot;post-commit&quot;</para>
+</listitem>
+            <listitem><para>string <link linkend="_namespacepenify__hook_1_1commands_1_1hook__commands_1a6a45aad71c8d32ce11a6dff8cee8bee7">HOOK_TEMPLATE</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<section>
+<title>Function Documentation</title>
+<anchor xml:id="_namespacepenify__hook_1_1commands_1_1hook__commands_1adff8f5d3bf1c3795974a391ee95b72b2"/><section>
+    <title>install_git_hook()</title>
+<indexterm><primary>install_git_hook</primary><secondary>penify_hook.commands.hook_commands</secondary></indexterm>
+<indexterm><primary>penify_hook.commands.hook_commands</primary><secondary>install_git_hook</secondary></indexterm>
+<para><computeroutput>def penify_hook.commands.hook_commands.install_git_hook ( location,  token)</computeroutput></para>
+<para><literallayout><computeroutput>Install a post-commit hook in the specified location that generates
+documentation
+for changed files after each commit.
+
+Args:
+    location (str): The path to the Git repository where the hook should be installed.
+    token (str): The authentication token required to access the documentation generation
+        service.
+</computeroutput></literallayout> </para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1commands_1_1hook__commands_adff8f5d3bf1c3795974a391ee95b72b2_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_namespacepenify__hook_1_1commands_1_1hook__commands_1a81543eb5fa835fd1237f24e8bce6201d"/><section>
+    <title>uninstall_git_hook()</title>
+<indexterm><primary>uninstall_git_hook</primary><secondary>penify_hook.commands.hook_commands</secondary></indexterm>
+<indexterm><primary>penify_hook.commands.hook_commands</primary><secondary>uninstall_git_hook</secondary></indexterm>
+<para><computeroutput>def penify_hook.commands.hook_commands.uninstall_git_hook ( location)</computeroutput></para>
+<para><literallayout><computeroutput>Uninstalls the post-commit hook from the specified location.
+
+This function attempts to remove a post-commit git hook located at the
+given path. It constructs the path to the hook and checks if it exists.
+If the hook is found, it is deleted, and a confirmation message is
+printed. If no hook is found, a message indicating this is also printed.
+
+Args:
+    location (Path): The base directory where the .git/hooks directory is located.
+</computeroutput></literallayout> </para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1commands_1_1hook__commands_a81543eb5fa835fd1237f24e8bce6201d_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+</section>
+<section>
+<title>Variable Documentation</title>
+<anchor xml:id="_namespacepenify__hook_1_1commands_1_1hook__commands_1ae82fd46e5a9219da1478b0476b8214b1"/><section>
+    <title>HOOK_FILENAME</title>
+<indexterm><primary>HOOK_FILENAME</primary><secondary>penify_hook.commands.hook_commands</secondary></indexterm>
+<indexterm><primary>penify_hook.commands.hook_commands</primary><secondary>HOOK_FILENAME</secondary></indexterm>
+<para><computeroutput>string penify_hook.commands.hook_commands.HOOK_FILENAME = &quot;post-commit&quot;</computeroutput></para></section>
+<anchor xml:id="_namespacepenify__hook_1_1commands_1_1hook__commands_1a6a45aad71c8d32ce11a6dff8cee8bee7"/><section>
+    <title>HOOK_TEMPLATE</title>
+<indexterm><primary>HOOK_TEMPLATE</primary><secondary>penify_hook.commands.hook_commands</secondary></indexterm>
+<indexterm><primary>penify_hook.commands.hook_commands</primary><secondary>HOOK_TEMPLATE</secondary></indexterm>
+<para><computeroutput>string penify_hook.commands.hook_commands.HOOK_TEMPLATE</computeroutput></para><emphasis role="strong">Initial value:</emphasis><programlisting linenumbering="unnumbered">1 =&#32;&#32;<emphasis role="stringliteral">&quot;&quot;&quot;#!/bin/sh</emphasis>
+2 <emphasis role="stringliteral">#&#32;This&#32;is&#32;a&#32;post-commit&#32;hook&#32;generated&#32;by&#32;penify.</emphasis>
+3 <emphasis role="stringliteral">#&#32;Automatically&#32;generates&#32;documentation&#32;for&#32;changed&#32;files&#32;after&#32;each&#32;commit.</emphasis>
+4 <emphasis role="stringliteral"></emphasis>
+5 <emphasis role="stringliteral">penify&#32;docgen&#32;-gf&#32;{git_folder_path}&#32;-t&#32;{token}</emphasis>
+6 <emphasis role="stringliteral">&quot;&quot;&quot;</emphasis>
+</programlisting></section>
+</section>
+</section>
diff --git a/docs345/docbook/namespacepenify__hook_1_1commands_1_1hook__commands_a81543eb5fa835fd1237f24e8bce6201d_icgraph.md5 b/docs345/docbook/namespacepenify__hook_1_1commands_1_1hook__commands_a81543eb5fa835fd1237f24e8bce6201d_icgraph.md5
new file mode 100644
index 0000000..197f108
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diff --git a/docs345/docbook/namespacepenify__hook_1_1commit__analyzer.xml b/docs345/docbook/namespacepenify__hook_1_1commit__analyzer.xml
new file mode 100644
index 0000000..f50a83d
--- /dev/null
+++ b/docs345/docbook/namespacepenify__hook_1_1commit__analyzer.xml
@@ -0,0 +1,12 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_namespacepenify__hook_1_1commit__analyzer" xml:lang="en-US">
+<title>penify_hook.commit_analyzer Namespace Reference</title>
+<indexterm><primary>penify_hook.commit_analyzer</primary></indexterm>
+<simplesect>
+    <title>Classes    </title>
+        <itemizedlist>
+            <listitem><para>class <link linkend="_classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook">CommitDocGenHook</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+</section>
diff --git a/docs345/docbook/namespacepenify__hook_1_1config__command.xml b/docs345/docbook/namespacepenify__hook_1_1config__command.xml
new file mode 100644
index 0000000..7583094
--- /dev/null
+++ b/docs345/docbook/namespacepenify__hook_1_1config__command.xml
@@ -0,0 +1,79 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_namespacepenify__hook_1_1config__command" xml:lang="en-US">
+<title>penify_hook.config_command Namespace Reference</title>
+<indexterm><primary>penify_hook.config_command</primary></indexterm>
+<simplesect>
+    <title>Functions    </title>
+        <itemizedlist>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1config__command_1a4f3eb92164a69df1446d745f8a09285e">setup_config_parser</link> (parent_parser)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1config__command_1a240e5331681eb574ac319d7458783bde">handle_config</link> (args)</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<section>
+<title>Function Documentation</title>
+<anchor xml:id="_namespacepenify__hook_1_1config__command_1a240e5331681eb574ac319d7458783bde"/><section>
+    <title>handle_config()</title>
+<indexterm><primary>handle_config</primary><secondary>penify_hook.config_command</secondary></indexterm>
+<indexterm><primary>penify_hook.config_command</primary><secondary>handle_config</secondary></indexterm>
+<para><computeroutput>def penify_hook.config_command.handle_config ( args)</computeroutput></para>
+<para><literallayout><computeroutput>Handle configuration settings based on the specified config type.
+
+This function processes different types of configurations such as LLM
+(Language Model) and JIRA. It saves configurations, sets up web-based
+configurations, and verifies JIRA connections.
+
+Args:
+    args (argparse.Namespace): Command-line arguments containing the type of configuration to handle.
+
+Returns:
+    int: Exit code indicating success or failure.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1config__command_a240e5331681eb574ac319d7458783bde_cgraph.svg"></imagedata>
+            </imageobject>
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+</para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1config__command_a240e5331681eb574ac319d7458783bde_icgraph.svg"></imagedata>
+            </imageobject>
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+</para>
+</section>
+<anchor xml:id="_namespacepenify__hook_1_1config__command_1a4f3eb92164a69df1446d745f8a09285e"/><section>
+    <title>setup_config_parser()</title>
+<indexterm><primary>setup_config_parser</primary><secondary>penify_hook.config_command</secondary></indexterm>
+<indexterm><primary>penify_hook.config_command</primary><secondary>setup_config_parser</secondary></indexterm>
+<para><computeroutput>def penify_hook.config_command.setup_config_parser ( parent_parser)</computeroutput></para>
+<para><literallayout><computeroutput>Set up a configuration parser with subparsers for different types of
+configurations.
+
+This function configures and adds subcommands to the parent parser. Each
+subcommand corresponds to a specific type of configuration, such as LLM
+(Language Model) or JIRA. It allows users to configure settings for
+these systems through command-line arguments.
+
+Args:
+    parent_parser (argparse.ArgumentParser): The parent parser to which the config subparsers will be added.
+</computeroutput></literallayout> </para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1config__command_a4f3eb92164a69df1446d745f8a09285e_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+</section>
+</section>
diff --git a/docs345/docbook/namespacepenify__hook_1_1config__command_a240e5331681eb574ac319d7458783bde_cgraph.md5 b/docs345/docbook/namespacepenify__hook_1_1config__command_a240e5331681eb574ac319d7458783bde_cgraph.md5
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diff --git a/docs345/docbook/namespacepenify__hook_1_1constants.xml b/docs345/docbook/namespacepenify__hook_1_1constants.xml
new file mode 100644
index 0000000..50a4fa0
--- /dev/null
+++ b/docs345/docbook/namespacepenify__hook_1_1constants.xml
@@ -0,0 +1,27 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_namespacepenify__hook_1_1constants" xml:lang="en-US">
+<title>penify_hook.constants Namespace Reference</title>
+<indexterm><primary>penify_hook.constants</primary></indexterm>
+<simplesect>
+    <title>Variables    </title>
+        <itemizedlist>
+            <listitem><para>string <link linkend="_namespacepenify__hook_1_1constants_1af198b5d1fc2f44657a2061aa324af3e0">API_URL</link> = &apos;http://localhost:8000/api&apos;</para>
+</listitem>
+            <listitem><para>string <link linkend="_namespacepenify__hook_1_1constants_1a316c5a606e4440fb8224c6544c3a15f0">DASHBOARD_URL</link> = &quot;https://dashboard.penify.dev/auth/localhost/login&quot;</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<section>
+<title>Variable Documentation</title>
+<anchor xml:id="_namespacepenify__hook_1_1constants_1af198b5d1fc2f44657a2061aa324af3e0"/><section>
+    <title>API_URL</title>
+<indexterm><primary>API_URL</primary><secondary>penify_hook.constants</secondary></indexterm>
+<indexterm><primary>penify_hook.constants</primary><secondary>API_URL</secondary></indexterm>
+<para><computeroutput>string penify_hook.constants.API_URL = &apos;http://localhost:8000/api&apos;</computeroutput></para></section>
+<anchor xml:id="_namespacepenify__hook_1_1constants_1a316c5a606e4440fb8224c6544c3a15f0"/><section>
+    <title>DASHBOARD_URL</title>
+<indexterm><primary>DASHBOARD_URL</primary><secondary>penify_hook.constants</secondary></indexterm>
+<indexterm><primary>penify_hook.constants</primary><secondary>DASHBOARD_URL</secondary></indexterm>
+<para><computeroutput>string penify_hook.constants.DASHBOARD_URL = &quot;https://dashboard.penify.dev/auth/localhost/login&quot;</computeroutput></para></section>
+</section>
+</section>
diff --git a/docs345/docbook/namespacepenify__hook_1_1file__analyzer.xml b/docs345/docbook/namespacepenify__hook_1_1file__analyzer.xml
new file mode 100644
index 0000000..85d4d1f
--- /dev/null
+++ b/docs345/docbook/namespacepenify__hook_1_1file__analyzer.xml
@@ -0,0 +1,27 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_namespacepenify__hook_1_1file__analyzer" xml:lang="en-US">
+<title>penify_hook.file_analyzer Namespace Reference</title>
+<indexterm><primary>penify_hook.file_analyzer</primary></indexterm>
+<simplesect>
+    <title>Classes    </title>
+        <itemizedlist>
+            <listitem><para>class <link linkend="_classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook">FileAnalyzerGenHook</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Variables    </title>
+        <itemizedlist>
+            <listitem><para><link linkend="_namespacepenify__hook_1_1file__analyzer_1af419a4965f079d58cac5a5281ddb1828">logger</link> = logging.getLogger(__name__)</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<section>
+<title>Variable Documentation</title>
+<anchor xml:id="_namespacepenify__hook_1_1file__analyzer_1af419a4965f079d58cac5a5281ddb1828"/><section>
+    <title>logger</title>
+<indexterm><primary>logger</primary><secondary>penify_hook.file_analyzer</secondary></indexterm>
+<indexterm><primary>penify_hook.file_analyzer</primary><secondary>logger</secondary></indexterm>
+<para><computeroutput>penify_hook.file_analyzer.logger = logging.getLogger(__name__)</computeroutput></para></section>
+</section>
+</section>
diff --git a/docs345/docbook/namespacepenify__hook_1_1folder__analyzer.xml b/docs345/docbook/namespacepenify__hook_1_1folder__analyzer.xml
new file mode 100644
index 0000000..afb471c
--- /dev/null
+++ b/docs345/docbook/namespacepenify__hook_1_1folder__analyzer.xml
@@ -0,0 +1,12 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_namespacepenify__hook_1_1folder__analyzer" xml:lang="en-US">
+<title>penify_hook.folder_analyzer Namespace Reference</title>
+<indexterm><primary>penify_hook.folder_analyzer</primary></indexterm>
+<simplesect>
+    <title>Classes    </title>
+        <itemizedlist>
+            <listitem><para>class <link linkend="_classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook">FolderAnalyzerGenHook</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+</section>
diff --git a/docs345/docbook/namespacepenify__hook_1_1git__analyzer.xml b/docs345/docbook/namespacepenify__hook_1_1git__analyzer.xml
new file mode 100644
index 0000000..875b214
--- /dev/null
+++ b/docs345/docbook/namespacepenify__hook_1_1git__analyzer.xml
@@ -0,0 +1,27 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_namespacepenify__hook_1_1git__analyzer" xml:lang="en-US">
+<title>penify_hook.git_analyzer Namespace Reference</title>
+<indexterm><primary>penify_hook.git_analyzer</primary></indexterm>
+<simplesect>
+    <title>Classes    </title>
+        <itemizedlist>
+            <listitem><para>class <link linkend="_classpenify__hook_1_1git__analyzer_1_1GitDocGenHook">GitDocGenHook</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Variables    </title>
+        <itemizedlist>
+            <listitem><para><link linkend="_namespacepenify__hook_1_1git__analyzer_1ac4ce143fdca789a79c66852c37d7363a">logger</link> = logging.getLogger(__name__)</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<section>
+<title>Variable Documentation</title>
+<anchor xml:id="_namespacepenify__hook_1_1git__analyzer_1ac4ce143fdca789a79c66852c37d7363a"/><section>
+    <title>logger</title>
+<indexterm><primary>logger</primary><secondary>penify_hook.git_analyzer</secondary></indexterm>
+<indexterm><primary>penify_hook.git_analyzer</primary><secondary>logger</secondary></indexterm>
+<para><computeroutput>penify_hook.git_analyzer.logger = logging.getLogger(__name__)</computeroutput></para></section>
+</section>
+</section>
diff --git a/docs345/docbook/namespacepenify__hook_1_1jira__client.xml b/docs345/docbook/namespacepenify__hook_1_1jira__client.xml
new file mode 100644
index 0000000..1c5cdc4
--- /dev/null
+++ b/docs345/docbook/namespacepenify__hook_1_1jira__client.xml
@@ -0,0 +1,27 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_namespacepenify__hook_1_1jira__client" xml:lang="en-US">
+<title>penify_hook.jira_client Namespace Reference</title>
+<indexterm><primary>penify_hook.jira_client</primary></indexterm>
+<simplesect>
+    <title>Classes    </title>
+        <itemizedlist>
+            <listitem><para>class <link linkend="_classpenify__hook_1_1jira__client_1_1JiraClient">JiraClient</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Variables    </title>
+        <itemizedlist>
+            <listitem><para>bool <link linkend="_namespacepenify__hook_1_1jira__client_1a5593ea3415081eca1eea92e4c1ad1aa2">JIRA_AVAILABLE</link> = True</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<section>
+<title>Variable Documentation</title>
+<anchor xml:id="_namespacepenify__hook_1_1jira__client_1a5593ea3415081eca1eea92e4c1ad1aa2"/><section>
+    <title>JIRA_AVAILABLE</title>
+<indexterm><primary>JIRA_AVAILABLE</primary><secondary>penify_hook.jira_client</secondary></indexterm>
+<indexterm><primary>penify_hook.jira_client</primary><secondary>JIRA_AVAILABLE</secondary></indexterm>
+<para><computeroutput>bool penify_hook.jira_client.JIRA_AVAILABLE = True</computeroutput></para></section>
+</section>
+</section>
diff --git a/docs345/docbook/namespacepenify__hook_1_1llm__client.xml b/docs345/docbook/namespacepenify__hook_1_1llm__client.xml
new file mode 100644
index 0000000..b5190b3
--- /dev/null
+++ b/docs345/docbook/namespacepenify__hook_1_1llm__client.xml
@@ -0,0 +1,12 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_namespacepenify__hook_1_1llm__client" xml:lang="en-US">
+<title>penify_hook.llm_client Namespace Reference</title>
+<indexterm><primary>penify_hook.llm_client</primary></indexterm>
+<simplesect>
+    <title>Classes    </title>
+        <itemizedlist>
+            <listitem><para>class <link linkend="_classpenify__hook_1_1llm__client_1_1LLMClient">LLMClient</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+</section>
diff --git a/docs345/docbook/namespacepenify__hook_1_1login__command.xml b/docs345/docbook/namespacepenify__hook_1_1login__command.xml
new file mode 100644
index 0000000..0d81b57
--- /dev/null
+++ b/docs345/docbook/namespacepenify__hook_1_1login__command.xml
@@ -0,0 +1,68 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_namespacepenify__hook_1_1login__command" xml:lang="en-US">
+<title>penify_hook.login_command Namespace Reference</title>
+<indexterm><primary>penify_hook.login_command</primary></indexterm>
+<simplesect>
+    <title>Functions    </title>
+        <itemizedlist>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1login__command_1aae63db4c484797bead34b7d874020c6a">setup_login_parser</link> (parser)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1login__command_1ae4bf932fbafeff834b0a0c5a37f74ccd">handle_login</link> (args)</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<section>
+<title>Function Documentation</title>
+<anchor xml:id="_namespacepenify__hook_1_1login__command_1ae4bf932fbafeff834b0a0c5a37f74ccd"/><section>
+    <title>handle_login()</title>
+<indexterm><primary>handle_login</primary><secondary>penify_hook.login_command</secondary></indexterm>
+<indexterm><primary>penify_hook.login_command</primary><secondary>handle_login</secondary></indexterm>
+<para><computeroutput>def penify_hook.login_command.handle_login ( args)</computeroutput></para>
+<para><literallayout><computeroutput>Handle the login command.
+
+Initiates a user login process by calling the `login` function from the
+`penify_hook.commands.auth_commands` module using predefined constants
+`API_URL` and `DASHBOARD_URL` from the `penify_hook.constants` module.
+
+Args:
+    args (argparse.Namespace): Parsed arguments containing necessary parameters for the login command.
+
+Returns:
+    None: This function does not return any value; it is expected to handle the
+        login process internally.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1login__command_ae4bf932fbafeff834b0a0c5a37f74ccd_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1login__command_ae4bf932fbafeff834b0a0c5a37f74ccd_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_namespacepenify__hook_1_1login__command_1aae63db4c484797bead34b7d874020c6a"/><section>
+    <title>setup_login_parser()</title>
+<indexterm><primary>setup_login_parser</primary><secondary>penify_hook.login_command</secondary></indexterm>
+<indexterm><primary>penify_hook.login_command</primary><secondary>setup_login_parser</secondary></indexterm>
+<para><computeroutput>def penify_hook.login_command.setup_login_parser ( parser)</computeroutput></para>Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1login__command_aae63db4c484797bead34b7d874020c6a_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+</section>
+</section>
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diff --git a/docs345/docbook/namespacepenify__hook_1_1main.xml b/docs345/docbook/namespacepenify__hook_1_1main.xml
new file mode 100644
index 0000000..4a86a96
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+++ b/docs345/docbook/namespacepenify__hook_1_1main.xml
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+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_namespacepenify__hook_1_1main" xml:lang="en-US">
+<title>penify_hook.main Namespace Reference</title>
+<indexterm><primary>penify_hook.main</primary></indexterm>
+<simplesect>
+    <title>Functions    </title>
+        <itemizedlist>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1main_1a16838b20df4bd14ee4b5e1dd2906738f">main</link> ()</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<section>
+<title>Function Documentation</title>
+<anchor xml:id="_namespacepenify__hook_1_1main_1a16838b20df4bd14ee4b5e1dd2906738f"/><section>
+    <title>main()</title>
+<indexterm><primary>main</primary><secondary>penify_hook.main</secondary></indexterm>
+<indexterm><primary>penify_hook.main</primary><secondary>main</secondary></indexterm>
+<para><computeroutput>def penify_hook.main.main ( )</computeroutput></para>
+<para><literallayout><computeroutput>Main function to handle command-line interface (CLI) interactions with
+Penify services.
+
+This tool provides a command-line interface for generating smart commit
+messages, configuring local-LLM and JIRA, and generating code
+documentation. It supports basic commands that do not require login and
+advanced commands that require user authentication. The `--version` flag
+can be used to display the version information.
+
+Returns:
+    int: Exit status of the program (0 for success, 1 for error).
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1main_a16838b20df4bd14ee4b5e1dd2906738f_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
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+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+</section>
+</section>
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diff --git a/docs345/docbook/namespacepenify__hook_1_1main_a16838b20df4bd14ee4b5e1dd2906738f_icgraph.md5 b/docs345/docbook/namespacepenify__hook_1_1main_a16838b20df4bd14ee4b5e1dd2906738f_icgraph.md5
new file mode 100644
index 0000000..4bf17ac
--- /dev/null
+++ b/docs345/docbook/namespacepenify__hook_1_1main_a16838b20df4bd14ee4b5e1dd2906738f_icgraph.md5
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new file mode 100644
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+++ b/docs345/docbook/namespacepenify__hook_1_1main_a16838b20df4bd14ee4b5e1dd2906738f_icgraph.svg
@@ -0,0 +1,28 @@
+<?xml version="1.0" encoding="UTF-8" standalone="no"?>
+<!DOCTYPE svg PUBLIC "-//W3C//DTD SVG 1.1//EN"
+ "http://www.w3.org/Graphics/SVG/1.1/DTD/svg11.dtd">
+<!-- Generated by graphviz version 2.43.0 (0)
+ -->
+<!-- Title: penify_hook.main.main Pages: 1 -->
+<svg width="139pt" height="46pt"
+ viewBox="0.00 0.00 139.00 46.00" xmlns="http://www.w3.org/2000/svg" xmlns:xlink="http://www.w3.org/1999/xlink">
+<g id="graph0" class="graph" transform="scale(1 1) rotate(0) translate(4 42)">
+<title>penify_hook.main.main</title>
+<polygon fill="white" stroke="transparent" points="-4,4 -4,-42 135,-42 135,4 -4,4"/>
+<!-- Node1 -->
+<g id="node1" class="node">
+<title>Node1</title>
+<g id="a_node1"><a xlink:title=" ">
+<polygon fill="#bfbfbf" stroke="black" points="0,-0.5 0,-19.5 131,-19.5 131,-0.5 0,-0.5"/>
+<text text-anchor="middle" x="65.5" y="-7.5" font-family="Helvetica,sans-Serif" font-size="10.00">penify_hook.main.main</text>
+</a>
+</g>
+</g>
+<!-- Node1&#45;&gt;Node1 -->
+<g id="edge1" class="edge">
+<title>Node1&#45;&gt;Node1</title>
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+</svg>
diff --git a/docs345/docbook/namespacepenify__hook_1_1ui__utils.xml b/docs345/docbook/namespacepenify__hook_1_1ui__utils.xml
new file mode 100644
index 0000000..c1e6e73
--- /dev/null
+++ b/docs345/docbook/namespacepenify__hook_1_1ui__utils.xml
@@ -0,0 +1,572 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_namespacepenify__hook_1_1ui__utils" xml:lang="en-US">
+<title>penify_hook.ui_utils Namespace Reference</title>
+<indexterm><primary>penify_hook.ui_utils</primary></indexterm>
+<simplesect>
+    <title>Functions    </title>
+        <itemizedlist>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1ui__utils_1a92c3e466d1912058167be2eacf85b9f6">format_info</link> (message)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1ui__utils_1a532cdb4de7c679ce8b29c3e9116c4776">format_success</link> (message)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1ui__utils_1a0a6fd2613c6fe053b6e4356cd9e5cda2">format_warning</link> (message)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1ui__utils_1a4dd934568897433fa73f9cc182ac4a3e">format_error</link> (message)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1ui__utils_1adcb97fc26b405d2b9cdf5eb7aecc5452">format_highlight</link> (message)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1ui__utils_1af3441fb3c2c3850b8b3b6455a9fdaba4">format_file_path</link> (file_path)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44">print_info</link> (message)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1ui__utils_1a2b16aa6b68a9edea5f29f84f1c4be79a">print_success</link> (message)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1ui__utils_1a1ffbb9671dbe233770268e2dd66a67fa">print_warning</link> (message)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1ui__utils_1a6f0acd7dd91abfe67d0807803bc3b65f">print_error</link> (message)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1ui__utils_1adfcbbfe39029ab6d1dd33e7bf75ae115">print_processing</link> (file_path)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1ui__utils_1aa6e684c00e26199440137a87ed9b195c">print_status</link> (status, message)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1ui__utils_1a12b92532b1458af94f3649d411b5505c">create_progress_bar</link> (total, desc=&quot;Processing&quot;, unit=&quot;item&quot;)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1ui__utils_1a3da02cd1140179a9ce60f62c85fccfef">create_stage_progress_bar</link> (stages, desc=&quot;Processing&quot;)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1ui__utils_1a5a7340d0fc60fb80f17514d60bf45f1d">update_stage</link> (pbar, stage_name)</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Variables    </title>
+        <itemizedlist>
+            <listitem><para><link linkend="_namespacepenify__hook_1_1ui__utils_1ab560cfade398ac1e0bd47befb52d9f71">autoreset</link></para>
+</listitem>
+            <listitem><para><link linkend="_namespacepenify__hook_1_1ui__utils_1a9fdcb180915696f5d217032a62c3857c">INFO_COLOR</link> = Fore.CYAN</para>
+</listitem>
+            <listitem><para><link linkend="_namespacepenify__hook_1_1ui__utils_1a22c450c5e2b5394618ecf9b636560df4">SUCCESS_COLOR</link> = Fore.GREEN</para>
+</listitem>
+            <listitem><para><link linkend="_namespacepenify__hook_1_1ui__utils_1a177bc9b44157844c999e0c1c2c6936ff">WARNING_COLOR</link> = Fore.YELLOW</para>
+</listitem>
+            <listitem><para><link linkend="_namespacepenify__hook_1_1ui__utils_1a4ab4e61dfab7973c87bef59c6e1977fe">ERROR_COLOR</link> = Fore.RED</para>
+</listitem>
+            <listitem><para><link linkend="_namespacepenify__hook_1_1ui__utils_1aba01b8259f0d66cdc2b4a1b58f9736fc">HIGHLIGHT_COLOR</link> = Fore.BLUE</para>
+</listitem>
+            <listitem><para><link linkend="_namespacepenify__hook_1_1ui__utils_1aca0fcee81606857497520ae4290bc9f5">NEUTRAL_COLOR</link> = Fore.WHITE</para>
+</listitem>
+            <listitem><para>string <link linkend="_namespacepenify__hook_1_1ui__utils_1a3c6fe4bd17c1a5fe76587225ae4beb3e">SUCCESS_SYMBOL</link> = &quot;✓&quot;</para>
+</listitem>
+            <listitem><para>string <link linkend="_namespacepenify__hook_1_1ui__utils_1a6eaea98f1a8cbe16a181647da2fc0a16">WARNING_SYMBOL</link> = &quot;○&quot;</para>
+</listitem>
+            <listitem><para>string <link linkend="_namespacepenify__hook_1_1ui__utils_1aa564e1e1d016c8227d076542e74cecb0">ERROR_SYMBOL</link> = &quot;✗&quot;</para>
+</listitem>
+            <listitem><para>string <link linkend="_namespacepenify__hook_1_1ui__utils_1a3b208e2750a38dd09467a73e4afd9756">PROCESSING_SYMBOL</link> = &quot;⟳&quot;</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<section>
+<title>Detailed Description</title>
+
+<para><literallayout><computeroutput>UI utilities for Penify CLI.
+
+This module provides utility functions for consistent UI formatting,
+colored output, and progress indicators across the Penify CLI application.
+</computeroutput></literallayout> </para>
+</section>
+<section>
+<title>Function Documentation</title>
+<anchor xml:id="_namespacepenify__hook_1_1ui__utils_1a12b92532b1458af94f3649d411b5505c"/><section>
+    <title>create_progress_bar()</title>
+<indexterm><primary>create_progress_bar</primary><secondary>penify_hook.ui_utils</secondary></indexterm>
+<indexterm><primary>penify_hook.ui_utils</primary><secondary>create_progress_bar</secondary></indexterm>
+<para><computeroutput>def penify_hook.ui_utils.create_progress_bar ( total,  desc = <computeroutput>&quot;Processing&quot;</computeroutput>
+,  unit = <computeroutput>&quot;item&quot;</computeroutput>
+)</computeroutput></para>
+<para><literallayout><computeroutput>Create a tqdm progress bar with consistent styling.
+
+Args:
+    total (int): Total number of items to process.
+    desc (str): Description for the progress bar. Defaults to &quot;Processing&quot;.
+    unit (str): Unit label for the progress items. Defaults to &quot;item&quot;.
+
+Returns:
+    tqdm: A configured tqdm progress bar instance.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1ui__utils_a12b92532b1458af94f3649d411b5505c_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1ui__utils_a12b92532b1458af94f3649d411b5505c_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_namespacepenify__hook_1_1ui__utils_1a3da02cd1140179a9ce60f62c85fccfef"/><section>
+    <title>create_stage_progress_bar()</title>
+<indexterm><primary>create_stage_progress_bar</primary><secondary>penify_hook.ui_utils</secondary></indexterm>
+<indexterm><primary>penify_hook.ui_utils</primary><secondary>create_stage_progress_bar</secondary></indexterm>
+<para><computeroutput>def penify_hook.ui_utils.create_stage_progress_bar ( stages,  desc = <computeroutput>&quot;Processing&quot;</computeroutput>
+)</computeroutput></para>
+<para><literallayout><computeroutput>Create a tqdm progress bar for processing stages with consistent
+styling.
+
+This function initializes and returns a tqdm progress bar object for
+tracking the progress through a series of stages. It also provides a
+description for the progress bar to enhance its usability.
+
+Args:
+    stages (list): A list of strings representing individual stages in the process.
+    desc (str?): A description for the progress bar. Defaults to &quot;Processing&quot;.
+
+Returns:
+    tuple: A tuple containing the tqdm progress bar object and the list of stages.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1ui__utils_a3da02cd1140179a9ce60f62c85fccfef_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1ui__utils_a3da02cd1140179a9ce60f62c85fccfef_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_namespacepenify__hook_1_1ui__utils_1a4dd934568897433fa73f9cc182ac4a3e"/><section>
+    <title>format_error()</title>
+<indexterm><primary>format_error</primary><secondary>penify_hook.ui_utils</secondary></indexterm>
+<indexterm><primary>penify_hook.ui_utils</primary><secondary>format_error</secondary></indexterm>
+<para><computeroutput>def penify_hook.ui_utils.format_error ( message)</computeroutput></para>
+<para><literallayout><computeroutput>Format an error message with appropriate color.
+
+This function takes a plain error message and wraps it in ANSI escape
+codes to apply the specified error color, ensuring that the error
+message is visually distinct when output. The function supports various
+error colors defined by constants like `ERROR_COLOR`.
+
+Args:
+    message (str): The plain text error message to be formatted.
+
+Returns:
+    str: The formatted error message with the error color applied.
+</computeroutput></literallayout> </para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1ui__utils_a4dd934568897433fa73f9cc182ac4a3e_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_namespacepenify__hook_1_1ui__utils_1af3441fb3c2c3850b8b3b6455a9fdaba4"/><section>
+    <title>format_file_path()</title>
+<indexterm><primary>format_file_path</primary><secondary>penify_hook.ui_utils</secondary></indexterm>
+<indexterm><primary>penify_hook.ui_utils</primary><secondary>format_file_path</secondary></indexterm>
+<para><computeroutput>def penify_hook.ui_utils.format_file_path ( file_path)</computeroutput></para>
+<para><literallayout><computeroutput>Format a file path with appropriate color.
+
+This function takes a file path as input and wraps it in ANSI escape
+codes to apply a warning color. The original file path is then reset to
+default style using Style.RESET_ALL.
+
+Args:
+    file_path (str): The file path to be formatted.
+
+Returns:
+    str: The formatted file path with the warning color applied.
+</computeroutput></literallayout> </para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1ui__utils_af3441fb3c2c3850b8b3b6455a9fdaba4_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_namespacepenify__hook_1_1ui__utils_1adcb97fc26b405d2b9cdf5eb7aecc5452"/><section>
+    <title>format_highlight()</title>
+<indexterm><primary>format_highlight</primary><secondary>penify_hook.ui_utils</secondary></indexterm>
+<indexterm><primary>penify_hook.ui_utils</primary><secondary>format_highlight</secondary></indexterm>
+<para><computeroutput>def penify_hook.ui_utils.format_highlight ( message)</computeroutput></para>
+<para><literallayout><computeroutput>Format a highlighted message with appropriate color.
+
+Args:
+    message (str): The message to be formatted and highlighted.
+
+Returns:
+    str: The formatted message with applied highlight style.
+</computeroutput></literallayout> </para>
+</section>
+<anchor xml:id="_namespacepenify__hook_1_1ui__utils_1a92c3e466d1912058167be2eacf85b9f6"/><section>
+    <title>format_info()</title>
+<indexterm><primary>format_info</primary><secondary>penify_hook.ui_utils</secondary></indexterm>
+<indexterm><primary>penify_hook.ui_utils</primary><secondary>format_info</secondary></indexterm>
+<para><computeroutput>def penify_hook.ui_utils.format_info ( message)</computeroutput></para>
+<para><literallayout><computeroutput>Format an informational message with appropriate color.
+
+Args:
+    message (str): The text of the informational message to be formatted.
+
+Returns:
+    str: The formatted informational message with the specified color.
+</computeroutput></literallayout> </para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1ui__utils_a92c3e466d1912058167be2eacf85b9f6_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_namespacepenify__hook_1_1ui__utils_1a532cdb4de7c679ce8b29c3e9116c4776"/><section>
+    <title>format_success()</title>
+<indexterm><primary>format_success</primary><secondary>penify_hook.ui_utils</secondary></indexterm>
+<indexterm><primary>penify_hook.ui_utils</primary><secondary>format_success</secondary></indexterm>
+<para><computeroutput>def penify_hook.ui_utils.format_success ( message)</computeroutput></para>
+<para><literallayout><computeroutput>Format a success message with appropriate color.
+
+This function takes a message as input and wraps it in ANSI escape codes
+to display it in green, indicating a successful operation. The
+Style.RESET_ALL is applied at the end to ensure that any subsequent text
+is displayed in the default style.
+
+Args:
+    message (str): The message to be formatted as a success message.
+
+Returns:
+    str: The formatted success message with green color and reset style.
+</computeroutput></literallayout> </para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1ui__utils_a532cdb4de7c679ce8b29c3e9116c4776_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_namespacepenify__hook_1_1ui__utils_1a0a6fd2613c6fe053b6e4356cd9e5cda2"/><section>
+    <title>format_warning()</title>
+<indexterm><primary>format_warning</primary><secondary>penify_hook.ui_utils</secondary></indexterm>
+<indexterm><primary>penify_hook.ui_utils</primary><secondary>format_warning</secondary></indexterm>
+<para><computeroutput>def penify_hook.ui_utils.format_warning ( message)</computeroutput></para>
+<para><literallayout><computeroutput>Format a warning message with appropriate color.
+
+Args:
+    message (str): The warning message to be formatted.
+
+Returns:
+    str: The formatted warning message with the specified color.
+</computeroutput></literallayout> </para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1ui__utils_a0a6fd2613c6fe053b6e4356cd9e5cda2_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_namespacepenify__hook_1_1ui__utils_1a6f0acd7dd91abfe67d0807803bc3b65f"/><section>
+    <title>print_error()</title>
+<indexterm><primary>print_error</primary><secondary>penify_hook.ui_utils</secondary></indexterm>
+<indexterm><primary>penify_hook.ui_utils</primary><secondary>print_error</secondary></indexterm>
+<para><computeroutput>def penify_hook.ui_utils.print_error ( message)</computeroutput></para>
+<para><literallayout><computeroutput>Print an error message with appropriate formatting.
+
+This function takes a string message, formats it as an error message,
+and then prints it. The formatting typically includes prefixing the
+message with &quot;Error: &quot; to clearly indicate that it is an error.
+
+Args:
+    message (str): The error message to be printed.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1ui__utils_a6f0acd7dd91abfe67d0807803bc3b65f_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1ui__utils_a6f0acd7dd91abfe67d0807803bc3b65f_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44"/><section>
+    <title>print_info()</title>
+<indexterm><primary>print_info</primary><secondary>penify_hook.ui_utils</secondary></indexterm>
+<indexterm><primary>penify_hook.ui_utils</primary><secondary>print_info</secondary></indexterm>
+<para><computeroutput>def penify_hook.ui_utils.print_info ( message)</computeroutput></para>
+<para><literallayout><computeroutput>Print an informational message with appropriate formatting.
+
+This function takes a string message as input and prints it in a
+formatted manner. It utilizes the `format_info` function to apply any
+necessary formatting before printing.
+
+Args:
+    message (str): The message to be printed.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1ui__utils_a811f0adf6e9bf71510c379b6fa155e44_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1ui__utils_a811f0adf6e9bf71510c379b6fa155e44_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_namespacepenify__hook_1_1ui__utils_1adfcbbfe39029ab6d1dd33e7bf75ae115"/><section>
+    <title>print_processing()</title>
+<indexterm><primary>print_processing</primary><secondary>penify_hook.ui_utils</secondary></indexterm>
+<indexterm><primary>penify_hook.ui_utils</primary><secondary>print_processing</secondary></indexterm>
+<para><computeroutput>def penify_hook.ui_utils.print_processing ( file_path)</computeroutput></para>
+<para><literallayout><computeroutput>Print a processing message for a specified file.
+
+This function takes a file path, formats it using `format_file_path`,
+and then prints a formatted message indicating that the file is being
+processed. The formatted path is highlighted using `format_highlight`.
+
+Args:
+    file_path (str): The path of the file to be processed.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1ui__utils_adfcbbfe39029ab6d1dd33e7bf75ae115_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1ui__utils_adfcbbfe39029ab6d1dd33e7bf75ae115_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_namespacepenify__hook_1_1ui__utils_1aa6e684c00e26199440137a87ed9b195c"/><section>
+    <title>print_status()</title>
+<indexterm><primary>print_status</primary><secondary>penify_hook.ui_utils</secondary></indexterm>
+<indexterm><primary>penify_hook.ui_utils</primary><secondary>print_status</secondary></indexterm>
+<para><computeroutput>def penify_hook.ui_utils.print_status ( status,  message)</computeroutput></para>
+<para><literallayout><computeroutput>Print a status message with an appropriate symbol.
+
+This function takes a status and a message, then prints them with a
+colored symbol that corresponds to the given status. The available
+statuses are &apos;success&apos;, &apos;warning&apos;, &apos;error&apos;, and any other value will
+default to a processing indicator.
+
+Args:
+    status (str): The status type (&apos;success&apos;, &apos;warning&apos;, &apos;error&apos;) or another string.
+    message (str): The message to be displayed along with the symbol.
+</computeroutput></literallayout> </para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1ui__utils_aa6e684c00e26199440137a87ed9b195c_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_namespacepenify__hook_1_1ui__utils_1a2b16aa6b68a9edea5f29f84f1c4be79a"/><section>
+    <title>print_success()</title>
+<indexterm><primary>print_success</primary><secondary>penify_hook.ui_utils</secondary></indexterm>
+<indexterm><primary>penify_hook.ui_utils</primary><secondary>print_success</secondary></indexterm>
+<para><computeroutput>def penify_hook.ui_utils.print_success ( message)</computeroutput></para>
+<para><literallayout><computeroutput>Print a formatted success message.
+
+This function takes a string `message` and prints it as a formatted
+success message. The formatting includes adding a prefix &quot;Success: &quot; to
+the message and enclosing it within asterisks for emphasis.
+
+Args:
+    message (str): The message to be printed as a success message.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1ui__utils_a2b16aa6b68a9edea5f29f84f1c4be79a_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1ui__utils_a2b16aa6b68a9edea5f29f84f1c4be79a_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_namespacepenify__hook_1_1ui__utils_1a1ffbb9671dbe233770268e2dd66a67fa"/><section>
+    <title>print_warning()</title>
+<indexterm><primary>print_warning</primary><secondary>penify_hook.ui_utils</secondary></indexterm>
+<indexterm><primary>penify_hook.ui_utils</primary><secondary>print_warning</secondary></indexterm>
+<para><computeroutput>def penify_hook.ui_utils.print_warning ( message)</computeroutput></para>
+<para><literallayout><computeroutput>Print a warning message with appropriate formatting.
+
+This function takes a warning message as input and prints it with
+formatted output. The formatting may include color, timestamp, or other
+styles to emphasize that it is a warning.
+
+Args:
+    message (str): The warning message to be printed.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1ui__utils_a1ffbb9671dbe233770268e2dd66a67fa_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1ui__utils_a1ffbb9671dbe233770268e2dd66a67fa_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_namespacepenify__hook_1_1ui__utils_1a5a7340d0fc60fb80f17514d60bf45f1d"/><section>
+    <title>update_stage()</title>
+<indexterm><primary>update_stage</primary><secondary>penify_hook.ui_utils</secondary></indexterm>
+<indexterm><primary>penify_hook.ui_utils</primary><secondary>update_stage</secondary></indexterm>
+<para><computeroutput>def penify_hook.ui_utils.update_stage ( pbar,  stage_name)</computeroutput></para>
+<para><literallayout><computeroutput>Update the progress bar with a new stage name.
+
+This function updates the provided tqdm progress bar to reflect the
+current stage of a process. It clears any existing postfix and sets a
+new description based on the provided stage name. The display is then
+refreshed to ensure that the update is visible immediately.
+
+Args:
+    pbar (tqdm): The progress bar object to be updated.
+    stage_name (str): A string representing the current stage of the process.
+</computeroutput></literallayout> </para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1ui__utils_a5a7340d0fc60fb80f17514d60bf45f1d_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+</section>
+<section>
+<title>Variable Documentation</title>
+<anchor xml:id="_namespacepenify__hook_1_1ui__utils_1ab560cfade398ac1e0bd47befb52d9f71"/><section>
+    <title>autoreset</title>
+<indexterm><primary>autoreset</primary><secondary>penify_hook.ui_utils</secondary></indexterm>
+<indexterm><primary>penify_hook.ui_utils</primary><secondary>autoreset</secondary></indexterm>
+<para><computeroutput>penify_hook.ui_utils.autoreset</computeroutput></para></section>
+<anchor xml:id="_namespacepenify__hook_1_1ui__utils_1a4ab4e61dfab7973c87bef59c6e1977fe"/><section>
+    <title>ERROR_COLOR</title>
+<indexterm><primary>ERROR_COLOR</primary><secondary>penify_hook.ui_utils</secondary></indexterm>
+<indexterm><primary>penify_hook.ui_utils</primary><secondary>ERROR_COLOR</secondary></indexterm>
+<para><computeroutput>penify_hook.ui_utils.ERROR_COLOR = Fore.RED</computeroutput></para></section>
+<anchor xml:id="_namespacepenify__hook_1_1ui__utils_1aa564e1e1d016c8227d076542e74cecb0"/><section>
+    <title>ERROR_SYMBOL</title>
+<indexterm><primary>ERROR_SYMBOL</primary><secondary>penify_hook.ui_utils</secondary></indexterm>
+<indexterm><primary>penify_hook.ui_utils</primary><secondary>ERROR_SYMBOL</secondary></indexterm>
+<para><computeroutput>string penify_hook.ui_utils.ERROR_SYMBOL = &quot;✗&quot;</computeroutput></para></section>
+<anchor xml:id="_namespacepenify__hook_1_1ui__utils_1aba01b8259f0d66cdc2b4a1b58f9736fc"/><section>
+    <title>HIGHLIGHT_COLOR</title>
+<indexterm><primary>HIGHLIGHT_COLOR</primary><secondary>penify_hook.ui_utils</secondary></indexterm>
+<indexterm><primary>penify_hook.ui_utils</primary><secondary>HIGHLIGHT_COLOR</secondary></indexterm>
+<para><computeroutput>penify_hook.ui_utils.HIGHLIGHT_COLOR = Fore.BLUE</computeroutput></para></section>
+<anchor xml:id="_namespacepenify__hook_1_1ui__utils_1a9fdcb180915696f5d217032a62c3857c"/><section>
+    <title>INFO_COLOR</title>
+<indexterm><primary>INFO_COLOR</primary><secondary>penify_hook.ui_utils</secondary></indexterm>
+<indexterm><primary>penify_hook.ui_utils</primary><secondary>INFO_COLOR</secondary></indexterm>
+<para><computeroutput>penify_hook.ui_utils.INFO_COLOR = Fore.CYAN</computeroutput></para></section>
+<anchor xml:id="_namespacepenify__hook_1_1ui__utils_1aca0fcee81606857497520ae4290bc9f5"/><section>
+    <title>NEUTRAL_COLOR</title>
+<indexterm><primary>NEUTRAL_COLOR</primary><secondary>penify_hook.ui_utils</secondary></indexterm>
+<indexterm><primary>penify_hook.ui_utils</primary><secondary>NEUTRAL_COLOR</secondary></indexterm>
+<para><computeroutput>penify_hook.ui_utils.NEUTRAL_COLOR = Fore.WHITE</computeroutput></para></section>
+<anchor xml:id="_namespacepenify__hook_1_1ui__utils_1a3b208e2750a38dd09467a73e4afd9756"/><section>
+    <title>PROCESSING_SYMBOL</title>
+<indexterm><primary>PROCESSING_SYMBOL</primary><secondary>penify_hook.ui_utils</secondary></indexterm>
+<indexterm><primary>penify_hook.ui_utils</primary><secondary>PROCESSING_SYMBOL</secondary></indexterm>
+<para><computeroutput>string penify_hook.ui_utils.PROCESSING_SYMBOL = &quot;⟳&quot;</computeroutput></para></section>
+<anchor xml:id="_namespacepenify__hook_1_1ui__utils_1a22c450c5e2b5394618ecf9b636560df4"/><section>
+    <title>SUCCESS_COLOR</title>
+<indexterm><primary>SUCCESS_COLOR</primary><secondary>penify_hook.ui_utils</secondary></indexterm>
+<indexterm><primary>penify_hook.ui_utils</primary><secondary>SUCCESS_COLOR</secondary></indexterm>
+<para><computeroutput>penify_hook.ui_utils.SUCCESS_COLOR = Fore.GREEN</computeroutput></para></section>
+<anchor xml:id="_namespacepenify__hook_1_1ui__utils_1a3c6fe4bd17c1a5fe76587225ae4beb3e"/><section>
+    <title>SUCCESS_SYMBOL</title>
+<indexterm><primary>SUCCESS_SYMBOL</primary><secondary>penify_hook.ui_utils</secondary></indexterm>
+<indexterm><primary>penify_hook.ui_utils</primary><secondary>SUCCESS_SYMBOL</secondary></indexterm>
+<para><computeroutput>string penify_hook.ui_utils.SUCCESS_SYMBOL = &quot;✓&quot;</computeroutput></para></section>
+<anchor xml:id="_namespacepenify__hook_1_1ui__utils_1a177bc9b44157844c999e0c1c2c6936ff"/><section>
+    <title>WARNING_COLOR</title>
+<indexterm><primary>WARNING_COLOR</primary><secondary>penify_hook.ui_utils</secondary></indexterm>
+<indexterm><primary>penify_hook.ui_utils</primary><secondary>WARNING_COLOR</secondary></indexterm>
+<para><computeroutput>penify_hook.ui_utils.WARNING_COLOR = Fore.YELLOW</computeroutput></para></section>
+<anchor xml:id="_namespacepenify__hook_1_1ui__utils_1a6eaea98f1a8cbe16a181647da2fc0a16"/><section>
+    <title>WARNING_SYMBOL</title>
+<indexterm><primary>WARNING_SYMBOL</primary><secondary>penify_hook.ui_utils</secondary></indexterm>
+<indexterm><primary>penify_hook.ui_utils</primary><secondary>WARNING_SYMBOL</secondary></indexterm>
+<para><computeroutput>string penify_hook.ui_utils.WARNING_SYMBOL = &quot;○&quot;</computeroutput></para></section>
+</section>
+</section>
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diff --git a/docs345/docbook/namespacepenify__hook_1_1utils.xml b/docs345/docbook/namespacepenify__hook_1_1utils.xml
new file mode 100644
index 0000000..93aedb7
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+++ b/docs345/docbook/namespacepenify__hook_1_1utils.xml
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+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_namespacepenify__hook_1_1utils" xml:lang="en-US">
+<title>penify_hook.utils Namespace Reference</title>
+<indexterm><primary>penify_hook.utils</primary></indexterm>
+<simplesect>
+    <title>Classes    </title>
+        <itemizedlist>
+            <listitem><para>class <link linkend="_classpenify__hook_1_1utils_1_1GitRepoNotFoundError">GitRepoNotFoundError</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Functions    </title>
+        <itemizedlist>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1utils_1ae236f3c4c8bf5dcddbb92b4c2065eea3">get_repo_details</link> (Repo repo)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1utils_1a95c3f9c80860d6a2e2d061d2fb660a3f">recursive_search_git_folder</link> (folder_path)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1utils_1a4ec5335a4026c22a34a3a8ccf665a5f2">find_git_parent</link> (path)</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Variables    </title>
+        <itemizedlist>
+            <listitem><para><link linkend="_namespacepenify__hook_1_1utils_1a0c0c1ed6b197038085c94a90ceedfb01">logger</link> = logging.getLogger(__name__)</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<section>
+<title>Function Documentation</title>
+<anchor xml:id="_namespacepenify__hook_1_1utils_1a4ec5335a4026c22a34a3a8ccf665a5f2"/><section>
+    <title>find_git_parent()</title>
+<indexterm><primary>find_git_parent</primary><secondary>penify_hook.utils</secondary></indexterm>
+<indexterm><primary>penify_hook.utils</primary><secondary>find_git_parent</secondary></indexterm>
+<para><computeroutput>def penify_hook.utils.find_git_parent ( path)</computeroutput></para>
+<para><literallayout><computeroutput>Traverse up from the given path to find the nearest directory containing a .git subdirectory.</computeroutput></literallayout> </para>
+</section>
+<anchor xml:id="_namespacepenify__hook_1_1utils_1ae236f3c4c8bf5dcddbb92b4c2065eea3"/><section>
+    <title>get_repo_details()</title>
+<indexterm><primary>get_repo_details</primary><secondary>penify_hook.utils</secondary></indexterm>
+<indexterm><primary>penify_hook.utils</primary><secondary>get_repo_details</secondary></indexterm>
+<para><computeroutput>def penify_hook.utils.get_repo_details (Repo repo)</computeroutput></para>
+<para><literallayout><computeroutput>Determine the details of a repository including its remote URL, hosting service, organization name, and repository name.</computeroutput></literallayout> </para>
+</section>
+<anchor xml:id="_namespacepenify__hook_1_1utils_1a95c3f9c80860d6a2e2d061d2fb660a3f"/><section>
+    <title>recursive_search_git_folder()</title>
+<indexterm><primary>recursive_search_git_folder</primary><secondary>penify_hook.utils</secondary></indexterm>
+<indexterm><primary>penify_hook.utils</primary><secondary>recursive_search_git_folder</secondary></indexterm>
+<para><computeroutput>def penify_hook.utils.recursive_search_git_folder ( folder_path)</computeroutput></para>
+<para><literallayout><computeroutput>Recursively searches for a .git folder starting from the given directory.</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1utils_a95c3f9c80860d6a2e2d061d2fb660a3f_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+Here is the caller graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacepenify__hook_1_1utils_a95c3f9c80860d6a2e2d061d2fb660a3f_icgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+</section>
+<section>
+<title>Variable Documentation</title>
+<anchor xml:id="_namespacepenify__hook_1_1utils_1a0c0c1ed6b197038085c94a90ceedfb01"/><section>
+    <title>logger</title>
+<indexterm><primary>logger</primary><secondary>penify_hook.utils</secondary></indexterm>
+<indexterm><primary>penify_hook.utils</primary><secondary>logger</secondary></indexterm>
+<para><computeroutput>penify_hook.utils.logger = logging.getLogger(__name__)</computeroutput></para></section>
+</section>
+</section>
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diff --git a/docs345/docbook/namespacesetup.xml b/docs345/docbook/namespacesetup.xml
new file mode 100644
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+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_namespacesetup" xml:lang="en-US">
+<title>setup Namespace Reference</title>
+<indexterm><primary>setup</primary></indexterm>
+<simplesect>
+    <title>Variables    </title>
+        <itemizedlist>
+            <listitem><para><link linkend="_namespacesetup_1ab3a7a0638d76a01367c5bc3cc699447f">name</link></para>
+</listitem>
+            <listitem><para><link linkend="_namespacesetup_1a2aa722b36a933088812b50ea79b97a5c">version</link></para>
+</listitem>
+            <listitem><para><link linkend="_namespacesetup_1aff2375a361fd5865c77bd9aa093be747">packages</link></para>
+</listitem>
+            <listitem><para><link linkend="_namespacesetup_1abead4f26b530856f858f0d44c7cf2588">install_requires</link></para>
+</listitem>
+            <listitem><para><link linkend="_namespacesetup_1ada7058afc98897f073d3f3b8b9157059">entry_points</link></para>
+</listitem>
+            <listitem><para><link linkend="_namespacesetup_1a3a57a4772d418a06835249cbade0d86a">author</link></para>
+</listitem>
+            <listitem><para><link linkend="_namespacesetup_1a5b08034343aa2be607722a8b315f3625">author_email</link></para>
+</listitem>
+            <listitem><para><link linkend="_namespacesetup_1aedf461ec52a946bda975938ba0b93ec0">description</link></para>
+</listitem>
+            <listitem><para><link linkend="_namespacesetup_1a4cda9dbfb952875376a0749fe08a5bde">long_description</link></para>
+</listitem>
+            <listitem><para><link linkend="_namespacesetup_1a3796ea10c998699d07d391414ff5d720">long_description_content_type</link></para>
+</listitem>
+            <listitem><para><link linkend="_namespacesetup_1afc13124aa5c0124e84e1d965e3f4b0fb">url</link></para>
+</listitem>
+            <listitem><para><link linkend="_namespacesetup_1abe96a9c38c1c61f9f0fdb002c482f785">classifiers</link></para>
+</listitem>
+            <listitem><para><link linkend="_namespacesetup_1aa7ca7bc9391b217e81efeb03689d8dbf">python_requires</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<section>
+<title>Variable Documentation</title>
+<anchor xml:id="_namespacesetup_1a3a57a4772d418a06835249cbade0d86a"/><section>
+    <title>author</title>
+<indexterm><primary>author</primary><secondary>setup</secondary></indexterm>
+<indexterm><primary>setup</primary><secondary>author</secondary></indexterm>
+<para><computeroutput>setup.author</computeroutput></para></section>
+<anchor xml:id="_namespacesetup_1a5b08034343aa2be607722a8b315f3625"/><section>
+    <title>author_email</title>
+<indexterm><primary>author_email</primary><secondary>setup</secondary></indexterm>
+<indexterm><primary>setup</primary><secondary>author_email</secondary></indexterm>
+<para><computeroutput>setup.author_email</computeroutput></para></section>
+<anchor xml:id="_namespacesetup_1abe96a9c38c1c61f9f0fdb002c482f785"/><section>
+    <title>classifiers</title>
+<indexterm><primary>classifiers</primary><secondary>setup</secondary></indexterm>
+<indexterm><primary>setup</primary><secondary>classifiers</secondary></indexterm>
+<para><computeroutput>setup.classifiers</computeroutput></para></section>
+<anchor xml:id="_namespacesetup_1aedf461ec52a946bda975938ba0b93ec0"/><section>
+    <title>description</title>
+<indexterm><primary>description</primary><secondary>setup</secondary></indexterm>
+<indexterm><primary>setup</primary><secondary>description</secondary></indexterm>
+<para><computeroutput>setup.description</computeroutput></para></section>
+<anchor xml:id="_namespacesetup_1ada7058afc98897f073d3f3b8b9157059"/><section>
+    <title>entry_points</title>
+<indexterm><primary>entry_points</primary><secondary>setup</secondary></indexterm>
+<indexterm><primary>setup</primary><secondary>entry_points</secondary></indexterm>
+<para><computeroutput>setup.entry_points</computeroutput></para></section>
+<anchor xml:id="_namespacesetup_1abead4f26b530856f858f0d44c7cf2588"/><section>
+    <title>install_requires</title>
+<indexterm><primary>install_requires</primary><secondary>setup</secondary></indexterm>
+<indexterm><primary>setup</primary><secondary>install_requires</secondary></indexterm>
+<para><computeroutput>setup.install_requires</computeroutput></para></section>
+<anchor xml:id="_namespacesetup_1a4cda9dbfb952875376a0749fe08a5bde"/><section>
+    <title>long_description</title>
+<indexterm><primary>long_description</primary><secondary>setup</secondary></indexterm>
+<indexterm><primary>setup</primary><secondary>long_description</secondary></indexterm>
+<para><computeroutput>setup.long_description</computeroutput></para></section>
+<anchor xml:id="_namespacesetup_1a3796ea10c998699d07d391414ff5d720"/><section>
+    <title>long_description_content_type</title>
+<indexterm><primary>long_description_content_type</primary><secondary>setup</secondary></indexterm>
+<indexterm><primary>setup</primary><secondary>long_description_content_type</secondary></indexterm>
+<para><computeroutput>setup.long_description_content_type</computeroutput></para></section>
+<anchor xml:id="_namespacesetup_1ab3a7a0638d76a01367c5bc3cc699447f"/><section>
+    <title>name</title>
+<indexterm><primary>name</primary><secondary>setup</secondary></indexterm>
+<indexterm><primary>setup</primary><secondary>name</secondary></indexterm>
+<para><computeroutput>setup.name</computeroutput></para></section>
+<anchor xml:id="_namespacesetup_1aff2375a361fd5865c77bd9aa093be747"/><section>
+    <title>packages</title>
+<indexterm><primary>packages</primary><secondary>setup</secondary></indexterm>
+<indexterm><primary>setup</primary><secondary>packages</secondary></indexterm>
+<para><computeroutput>setup.packages</computeroutput></para></section>
+<anchor xml:id="_namespacesetup_1aa7ca7bc9391b217e81efeb03689d8dbf"/><section>
+    <title>python_requires</title>
+<indexterm><primary>python_requires</primary><secondary>setup</secondary></indexterm>
+<indexterm><primary>setup</primary><secondary>python_requires</secondary></indexterm>
+<para><computeroutput>setup.python_requires</computeroutput></para></section>
+<anchor xml:id="_namespacesetup_1afc13124aa5c0124e84e1d965e3f4b0fb"/><section>
+    <title>url</title>
+<indexterm><primary>url</primary><secondary>setup</secondary></indexterm>
+<indexterm><primary>setup</primary><secondary>url</secondary></indexterm>
+<para><computeroutput>setup.url</computeroutput></para></section>
+<anchor xml:id="_namespacesetup_1a2aa722b36a933088812b50ea79b97a5c"/><section>
+    <title>version</title>
+<indexterm><primary>version</primary><secondary>setup</secondary></indexterm>
+<indexterm><primary>setup</primary><secondary>version</secondary></indexterm>
+<para><computeroutput>setup.version</computeroutput></para></section>
+</section>
+</section>
diff --git a/docs345/docbook/namespacetests.xml b/docs345/docbook/namespacetests.xml
new file mode 100644
index 0000000..fe7db44
--- /dev/null
+++ b/docs345/docbook/namespacetests.xml
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+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_namespacetests" xml:lang="en-US">
+<title>tests Namespace Reference</title>
+<indexterm><primary>tests</primary></indexterm>
+<simplesect>
+    <title>Namespaces    </title>
+        <itemizedlist>
+            <listitem><para>namespace <link linkend="_namespacetests_1_1conftest">conftest</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacetests_1_1test__commit__commands">test_commit_commands</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacetests_1_1test__config__commands">test_config_commands</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacetests_1_1test__doc__commands">test_doc_commands</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacetests_1_1test__web__config">test_web_config</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+</section>
diff --git a/docs345/docbook/namespacetests_1_1conftest.xml b/docs345/docbook/namespacetests_1_1conftest.xml
new file mode 100644
index 0000000..9eabc77
--- /dev/null
+++ b/docs345/docbook/namespacetests_1_1conftest.xml
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+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_namespacetests_1_1conftest" xml:lang="en-US">
+<title>tests.conftest Namespace Reference</title>
+<indexterm><primary>tests.conftest</primary></indexterm>
+</section>
diff --git a/docs345/docbook/namespacetests_1_1test__commit__commands.xml b/docs345/docbook/namespacetests_1_1test__commit__commands.xml
new file mode 100644
index 0000000..b804950
--- /dev/null
+++ b/docs345/docbook/namespacetests_1_1test__commit__commands.xml
@@ -0,0 +1,12 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_namespacetests_1_1test__commit__commands" xml:lang="en-US">
+<title>tests.test_commit_commands Namespace Reference</title>
+<indexterm><primary>tests.test_commit_commands</primary></indexterm>
+<simplesect>
+    <title>Classes    </title>
+        <itemizedlist>
+            <listitem><para>class <link linkend="_classtests_1_1test__commit__commands_1_1TestCommitCommands">TestCommitCommands</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+</section>
diff --git a/docs345/docbook/namespacetests_1_1test__config__commands.xml b/docs345/docbook/namespacetests_1_1test__config__commands.xml
new file mode 100644
index 0000000..c01a55e
--- /dev/null
+++ b/docs345/docbook/namespacetests_1_1test__config__commands.xml
@@ -0,0 +1,12 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_namespacetests_1_1test__config__commands" xml:lang="en-US">
+<title>tests.test_config_commands Namespace Reference</title>
+<indexterm><primary>tests.test_config_commands</primary></indexterm>
+<simplesect>
+    <title>Classes    </title>
+        <itemizedlist>
+            <listitem><para>class <link linkend="_classtests_1_1test__config__commands_1_1TestConfigCommands">TestConfigCommands</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+</section>
diff --git a/docs345/docbook/namespacetests_1_1test__doc__commands.xml b/docs345/docbook/namespacetests_1_1test__doc__commands.xml
new file mode 100644
index 0000000..4b9a541
--- /dev/null
+++ b/docs345/docbook/namespacetests_1_1test__doc__commands.xml
@@ -0,0 +1,339 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_namespacetests_1_1test__doc__commands" xml:lang="en-US">
+<title>tests.test_doc_commands Namespace Reference</title>
+<indexterm><primary>tests.test_doc_commands</primary></indexterm>
+<simplesect>
+    <title>Functions    </title>
+        <itemizedlist>
+            <listitem><para>def <link linkend="_namespacetests_1_1test__doc__commands_1a806110833eb0aad547156faf014b31d8">test_generate_doc_no_location</link> (mock_getcwd, mock_api_client, mock_folder_analyzer, mock_file_analyzer, mock_git_analyzer)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacetests_1_1test__doc__commands_1a0e74c920f258f442914771164fe26b45">test_generate_doc_file_location</link> (mock_api_client, mock_folder_analyzer, mock_file_analyzer, mock_git_analyzer)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacetests_1_1test__doc__commands_1a4bb75610e40d94d42bc169b25403c186">test_generate_doc_folder_location</link> (mock_api_client, mock_folder_analyzer, mock_file_analyzer, mock_git_analyzer)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacetests_1_1test__doc__commands_1aec76cc25c23476794234cdadbcaef0c0">test_generate_doc_error_handling</link> (mock_api_client, mock_git_analyzer, mock_exit)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacetests_1_1test__doc__commands_1a0f27751d0ba2acfe40ef7e85bccf47d7">test_setup_docgen_parser</link> ()</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacetests_1_1test__doc__commands_1ab74688baa8c9b5ba302c2877a9789d05">test_handle_docgen_install_hook</link> (mock_exit, mock_get_token, mock_generate_doc, mock_uninstall_hook, mock_install_hook)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacetests_1_1test__doc__commands_1a1458af9ad0128c3ca1263b552fd5e482">test_handle_docgen_uninstall_hook</link> (mock_exit, mock_get_token, mock_generate_doc, mock_uninstall_hook, mock_install_hook)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacetests_1_1test__doc__commands_1ab158ffa48469b6c097a7a55fcb20c21a">test_handle_docgen_generate</link> (mock_get_token, mock_generate_doc, mock_uninstall_hook, mock_install_hook)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacetests_1_1test__doc__commands_1af9b01e5fc89255cac96747fa081c442c">test_handle_docgen_no_token</link> (mock_exit, mock_get_token)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacetests_1_1test__doc__commands_1a335e7fd4912192c7276cf31bbebc6eb0">test_generate_doc_with_file_exception</link> (mock_api_client, mock_getcwd)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacetests_1_1test__doc__commands_1a64165ddfdb3071a88422f080f0e529a3">test_generate_doc_with_folder_exception</link> (mock_api_client, mock_getcwd)</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<section>
+<title>Function Documentation</title>
+<anchor xml:id="_namespacetests_1_1test__doc__commands_1aec76cc25c23476794234cdadbcaef0c0"/><section>
+    <title>test_generate_doc_error_handling()</title>
+<indexterm><primary>test_generate_doc_error_handling</primary><secondary>tests.test_doc_commands</secondary></indexterm>
+<indexterm><primary>tests.test_doc_commands</primary><secondary>test_generate_doc_error_handling</secondary></indexterm>
+<para><computeroutput>def tests.test_doc_commands.test_generate_doc_error_handling ( mock_api_client,  mock_git_analyzer,  mock_exit)</computeroutput></para>
+<para><literallayout><computeroutput>Generate a documentation string for the provided code snippet using
+Google Docstring style.
+
+Short one line description: Test function to ensure proper error
+handling during API calls with GitAnalyzer.  Multiline long description:
+This test function is designed to verify that the generate_doc function
+handles exceptions correctly when an error occurs during API interaction
+with GitAnalyzer. It sets up a mock API client and a mock Git analyzer,
+causing the analyzer to raise an exception to simulate a failure
+condition. The function then asserts that the exit code is set to 1 when
+the error handling mechanism is invoked.
+
+Args:
+    mock_api_client (MagicMock): A mock object simulating the API client.
+    mock_git_analyzer (MagicMock): A mock object simulating the Git analyzer, configured to raise an
+        exception.
+    mock_exit (MagicMock): A mock object representing the exit function, which should be called
+        with an error code.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacetests_1_1test__doc__commands_aec76cc25c23476794234cdadbcaef0c0_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_namespacetests_1_1test__doc__commands_1a0e74c920f258f442914771164fe26b45"/><section>
+    <title>test_generate_doc_file_location()</title>
+<indexterm><primary>test_generate_doc_file_location</primary><secondary>tests.test_doc_commands</secondary></indexterm>
+<indexterm><primary>tests.test_doc_commands</primary><secondary>test_generate_doc_file_location</secondary></indexterm>
+<para><computeroutput>def tests.test_doc_commands.test_generate_doc_file_location ( mock_api_client,  mock_folder_analyzer,  mock_file_analyzer,  mock_git_analyzer)</computeroutput></para>
+<para><literallayout><computeroutput>Test generating a documentation file location.
+
+This function tests the process of generating a documentation file
+location using mock objects for API client, folder analyzer, file
+analyzer, and Git analyzer. It sets up the necessary mocks, calls the
+`generate_doc` function with specified parameters, and asserts that the
+appropriate methods on the mock objects are called as expected.
+
+Args:
+    mock_api_client (MagicMock): Mock object for the API client.
+    mock_folder_analyzer (MagicMock): Mock object for the folder analyzer.
+    mock_file_analyzer (MagicMock): Mock object for the file analyzer.
+    mock_git_analyzer (MagicMock): Mock object for the Git analyzer.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacetests_1_1test__doc__commands_a0e74c920f258f442914771164fe26b45_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_namespacetests_1_1test__doc__commands_1a4bb75610e40d94d42bc169b25403c186"/><section>
+    <title>test_generate_doc_folder_location()</title>
+<indexterm><primary>test_generate_doc_folder_location</primary><secondary>tests.test_doc_commands</secondary></indexterm>
+<indexterm><primary>tests.test_doc_commands</primary><secondary>test_generate_doc_folder_location</secondary></indexterm>
+<para><computeroutput>def tests.test_doc_commands.test_generate_doc_folder_location ( mock_api_client,  mock_folder_analyzer,  mock_file_analyzer,  mock_git_analyzer)</computeroutput></para>
+<para><literallayout><computeroutput>Test the function to generate documentation for a folder location.
+
+It sets up mock objects for API client, folder analyzer, file analyzer,
+and Git analyzer, then calls the `generate_doc` function with specified
+parameters. Finally, it asserts that the correct methods on the mock
+objects were called as expected.
+
+Args:
+    mock_api_client (MagicMock): Mock object for the API client.
+    mock_folder_analyzer (MagicMock): Mock object for the folder analyzer.
+    mock_file_analyzer (MagicMock): Mock object for the file analyzer.
+    mock_git_analyzer (MagicMock): Mock object for the Git analyzer.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacetests_1_1test__doc__commands_a4bb75610e40d94d42bc169b25403c186_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_namespacetests_1_1test__doc__commands_1a806110833eb0aad547156faf014b31d8"/><section>
+    <title>test_generate_doc_no_location()</title>
+<indexterm><primary>test_generate_doc_no_location</primary><secondary>tests.test_doc_commands</secondary></indexterm>
+<indexterm><primary>tests.test_doc_commands</primary><secondary>test_generate_doc_no_location</secondary></indexterm>
+<para><computeroutput>def tests.test_doc_commands.test_generate_doc_no_location ( mock_getcwd,  mock_api_client,  mock_folder_analyzer,  mock_file_analyzer,  mock_git_analyzer)</computeroutput></para>
+<para><literallayout><computeroutput>Test function to generate documentation without location information.
+
+This function sets up mocks for the API client, current working
+directory, and Git analyzer. It then calls the `generate_doc` function
+with a fake API URL and token. The function is expected to initialize
+the API client, configure the Git analyzer, and run it without any
+location information.
+
+Args:
+    mock_getcwd (MagicMock): Mock for os.getcwd().
+    mock_api_client (MagicMock): Mock for creating an API client.
+    mock_folder_analyzer (MagicMock): Mock for folder analysis.
+    mock_file_analyzer (MagicMock): Mock for file analysis.
+    mock_git_analyzer (MagicMock): Mock for Git analyzer setup.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacetests_1_1test__doc__commands_a806110833eb0aad547156faf014b31d8_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_namespacetests_1_1test__doc__commands_1a335e7fd4912192c7276cf31bbebc6eb0"/><section>
+    <title>test_generate_doc_with_file_exception()</title>
+<indexterm><primary>test_generate_doc_with_file_exception</primary><secondary>tests.test_doc_commands</secondary></indexterm>
+<indexterm><primary>tests.test_doc_commands</primary><secondary>test_generate_doc_with_file_exception</secondary></indexterm>
+<para><computeroutput>def tests.test_doc_commands.test_generate_doc_with_file_exception ( mock_api_client,  mock_getcwd)</computeroutput></para>
+<para><literallayout><computeroutput>Generate documentation from a Python source file.
+
+This function reads a Python file and generates a docstring based on its
+content. It uses mock objects to simulate API calls and directory
+operations during testing.
+
+Args:
+    mock_api_client (unittest.mock.MagicMock): A mock object for simulating API client behavior.
+    mock_getcwd (unittest.mock.MagicMock): A mock object for simulating the current working directory function.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacetests_1_1test__doc__commands_a335e7fd4912192c7276cf31bbebc6eb0_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_namespacetests_1_1test__doc__commands_1a64165ddfdb3071a88422f080f0e529a3"/><section>
+    <title>test_generate_doc_with_folder_exception()</title>
+<indexterm><primary>test_generate_doc_with_folder_exception</primary><secondary>tests.test_doc_commands</secondary></indexterm>
+<indexterm><primary>tests.test_doc_commands</primary><secondary>test_generate_doc_with_folder_exception</secondary></indexterm>
+<para><computeroutput>def tests.test_doc_commands.test_generate_doc_with_folder_exception ( mock_api_client,  mock_getcwd)</computeroutput></para>
+<para><literallayout><computeroutput>Generate documentation from a given API endpoint and save it to a
+folder.
+
+This function fetches data from the specified API endpoint, processes
+it, and saves the generated documentation in the provided folder. If an
+error occurs during the fetching process, a SystemExit exception is
+raised with an appropriate message.
+
+Args:
+    api_url (str): The URL of the API endpoint from which data will be fetched.
+    token (str): The authentication token required to access the API.
+    folder_path (str): The path to the folder where the documentation will be saved.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacetests_1_1test__doc__commands_a64165ddfdb3071a88422f080f0e529a3_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_namespacetests_1_1test__doc__commands_1ab158ffa48469b6c097a7a55fcb20c21a"/><section>
+    <title>test_handle_docgen_generate()</title>
+<indexterm><primary>test_handle_docgen_generate</primary><secondary>tests.test_doc_commands</secondary></indexterm>
+<indexterm><primary>tests.test_doc_commands</primary><secondary>test_handle_docgen_generate</secondary></indexterm>
+<para><computeroutput>def tests.test_doc_commands.test_handle_docgen_generate ( mock_get_token,  mock_generate_doc,  mock_uninstall_hook,  mock_install_hook)</computeroutput></para>
+<para><literallayout><computeroutput>Test the direct documentation generation functionality.
+
+This function tests the `handle_docgen` function when no subcommand is
+provided. It verifies that the document generation hook is called and
+the uninstall and install hooks are not called.
+
+Args:
+    mock_get_token (MagicMock): Mocked function to get authentication token.
+    mock_generate_doc (MagicMock): Mocked function for generating documentation.
+    mock_uninstall_hook (MagicMock): Mocked function for uninstalling the document generation hook.
+    mock_install_hook (MagicMock): Mocked function for installing the document generation hook.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacetests_1_1test__doc__commands_ab158ffa48469b6c097a7a55fcb20c21a_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_namespacetests_1_1test__doc__commands_1ab74688baa8c9b5ba302c2877a9789d05"/><section>
+    <title>test_handle_docgen_install_hook()</title>
+<indexterm><primary>test_handle_docgen_install_hook</primary><secondary>tests.test_doc_commands</secondary></indexterm>
+<indexterm><primary>tests.test_doc_commands</primary><secondary>test_handle_docgen_install_hook</secondary></indexterm>
+<para><computeroutput>def tests.test_doc_commands.test_handle_docgen_install_hook ( mock_exit,  mock_get_token,  mock_generate_doc,  mock_uninstall_hook,  mock_install_hook)</computeroutput></para>
+<para><literallayout><computeroutput>Test the handling of the &apos;install-hook&apos; subcommand.
+
+This function sets up a mock environment where it simulates the
+execution of the &apos;install-hook&apos; subcommand. It verifies that the
+`mock_install_hook` is called with the correct arguments, while
+`mock_generate_doc` and `mock_uninstall_hook` are not called.
+
+Args:
+    mock_exit (MagicMock): Mock object for sys.exit.
+    mock_get_token (MagicMock): Mock object to simulate fetching a token.
+    mock_generate_doc (MagicMock): Mock object to simulate generating documentation.
+    mock_uninstall_hook (MagicMock): Mock object to simulate uninstalling a hook.
+    mock_install_hook (MagicMock): Mock object to simulate installing a hook.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacetests_1_1test__doc__commands_ab74688baa8c9b5ba302c2877a9789d05_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_namespacetests_1_1test__doc__commands_1af9b01e5fc89255cac96747fa081c442c"/><section>
+    <title>test_handle_docgen_no_token()</title>
+<indexterm><primary>test_handle_docgen_no_token</primary><secondary>tests.test_doc_commands</secondary></indexterm>
+<indexterm><primary>tests.test_doc_commands</primary><secondary>test_handle_docgen_no_token</secondary></indexterm>
+<para><computeroutput>def tests.test_doc_commands.test_handle_docgen_no_token ( mock_exit,  mock_get_token)</computeroutput></para>
+<para><literallayout><computeroutput>Test the behavior of the `handle_docgen` function when no token is
+provided.
+
+This function asserts that if no token is returned by `mock_get_token`,
+the `handle_docgen` function will call `mock_exit` with a status code of
+1.
+
+Args:
+    mock_exit (MagicMock): A MagicMock object simulating the `exit` function.
+    mock_get_token (MagicMock): A MagicMock object simulating the `get_token` function.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacetests_1_1test__doc__commands_af9b01e5fc89255cac96747fa081c442c_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_namespacetests_1_1test__doc__commands_1a1458af9ad0128c3ca1263b552fd5e482"/><section>
+    <title>test_handle_docgen_uninstall_hook()</title>
+<indexterm><primary>test_handle_docgen_uninstall_hook</primary><secondary>tests.test_doc_commands</secondary></indexterm>
+<indexterm><primary>tests.test_doc_commands</primary><secondary>test_handle_docgen_uninstall_hook</secondary></indexterm>
+<para><computeroutput>def tests.test_doc_commands.test_handle_docgen_uninstall_hook ( mock_exit,  mock_get_token,  mock_generate_doc,  mock_uninstall_hook,  mock_install_hook)</computeroutput></para>
+<para><literallayout><computeroutput>Test the uninstall-hook subcommand of the handle_docgen function.
+This test case sets up a mock environment and verifies that the
+uninstall-hook is called with the correct location, while generate_doc
+and install_hook are not called.
+
+Args:
+    mock_exit (MagicMock): A mock for the exit function.
+    mock_get_token (MagicMock): A mock for the get_token function.
+    mock_generate_doc (MagicMock): A mock for the generate_doc function.
+    mock_uninstall_hook (MagicMock): A mock for the uninstall_hook function.
+    mock_install_hook (MagicMock): A mock for the install_hook function.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacetests_1_1test__doc__commands_a1458af9ad0128c3ca1263b552fd5e482_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+<anchor xml:id="_namespacetests_1_1test__doc__commands_1a0f27751d0ba2acfe40ef7e85bccf47d7"/><section>
+    <title>test_setup_docgen_parser()</title>
+<indexterm><primary>test_setup_docgen_parser</primary><secondary>tests.test_doc_commands</secondary></indexterm>
+<indexterm><primary>tests.test_doc_commands</primary><secondary>test_setup_docgen_parser</secondary></indexterm>
+<para><computeroutput>def tests.test_doc_commands.test_setup_docgen_parser ( )</computeroutput></para>
+<para><literallayout><computeroutput>Test the setup_docgen_parser function to ensure it properly configures
+the ArgumentParser for docgen options.
+
+It verifies that the parser correctly sets up docgen options and handles
+different subcommands like &apos;install-hook&apos; and &apos;uninstall-hook&apos;.
+</computeroutput></literallayout> </para>
+Here is the call graph for this function:<para>
+    <informalfigure>
+        <mediaobject>
+            <imageobject>
+                <imagedata width="50%" align="center" valign="middle" scalefit="0" fileref="namespacetests_1_1test__doc__commands_a0f27751d0ba2acfe40ef7e85bccf47d7_cgraph.svg"></imagedata>
+            </imageobject>
+        </mediaobject>
+    </informalfigure>
+</para>
+</section>
+</section>
+</section>
diff --git a/docs345/docbook/namespacetests_1_1test__doc__commands_a0e74c920f258f442914771164fe26b45_cgraph.md5 b/docs345/docbook/namespacetests_1_1test__doc__commands_a0e74c920f258f442914771164fe26b45_cgraph.md5
new file mode 100644
index 0000000..b280dc5
--- /dev/null
+++ b/docs345/docbook/namespacetests_1_1test__doc__commands_a0e74c920f258f442914771164fe26b45_cgraph.md5
@@ -0,0 +1 @@
+28c17f21f2a2a250d23b14c68e3e5d3a
\ No newline at end of file
diff --git a/docs345/docbook/namespacetests_1_1test__doc__commands_a0e74c920f258f442914771164fe26b45_cgraph.svg b/docs345/docbook/namespacetests_1_1test__doc__commands_a0e74c920f258f442914771164fe26b45_cgraph.svg
new file mode 100644
index 0000000..fc67c78
--- /dev/null
+++ b/docs345/docbook/namespacetests_1_1test__doc__commands_a0e74c920f258f442914771164fe26b45_cgraph.svg
@@ -0,0 +1,39 @@
+<?xml version="1.0" encoding="UTF-8" standalone="no"?>
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+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
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+<title>tests.test_web_config Namespace Reference</title>
+<indexterm><primary>tests.test_web_config</primary></indexterm>
+<simplesect>
+    <title>Classes    </title>
+        <itemizedlist>
+            <listitem><para>class <link linkend="_classtests_1_1test__web__config_1_1TestWebConfig">TestWebConfig</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+</section>
diff --git a/docs345/docbook/penify-cli-documentation_8md.xml b/docs345/docbook/penify-cli-documentation_8md.xml
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new file mode 100644
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+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
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+<indexterm><primary>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/__init__.py</primary></indexterm>
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+<indexterm><primary>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/__init__.py</primary></indexterm>
+<simplesect>
+    <title>Namespaces    </title>
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+</simplesect>
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+        <itemizedlist>
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+            <listitem><para><link linkend="_namespacesetup_1ada7058afc98897f073d3f3b8b9157059">setup.entry_points</link></para>
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+            <listitem><para><link linkend="_namespacesetup_1a3a57a4772d418a06835249cbade0d86a">setup.author</link></para>
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+            <listitem><para><link linkend="_namespacesetup_1a5b08034343aa2be607722a8b315f3625">setup.author_email</link></para>
+</listitem>
+            <listitem><para><link linkend="_namespacesetup_1aedf461ec52a946bda975938ba0b93ec0">setup.description</link></para>
+</listitem>
+            <listitem><para><link linkend="_namespacesetup_1a4cda9dbfb952875376a0749fe08a5bde">setup.long_description</link></para>
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+            <listitem><para><link linkend="_namespacesetup_1a3796ea10c998699d07d391414ff5d720">setup.long_description_content_type</link></para>
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+            <listitem><para><link linkend="_namespacesetup_1afc13124aa5c0124e84e1d965e3f4b0fb">setup.url</link></para>
+</listitem>
+            <listitem><para><link linkend="_namespacesetup_1abe96a9c38c1c61f9f0fdb002c482f785">setup.classifiers</link></para>
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+            <listitem><para><link linkend="_namespacesetup_1aa7ca7bc9391b217e81efeb03689d8dbf">setup.python_requires</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+</section>
diff --git a/docs345/docbook/test__commit__commands_8py.xml b/docs345/docbook/test__commit__commands_8py.xml
new file mode 100644
index 0000000..5ff399a
--- /dev/null
+++ b/docs345/docbook/test__commit__commands_8py.xml
@@ -0,0 +1,21 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_test__commit__commands_8py" xml:lang="en-US">
+<title>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py File Reference</title>
+<indexterm><primary>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py</primary></indexterm>
+<simplesect>
+    <title>Classes    </title>
+        <itemizedlist>
+            <listitem><para>class <link linkend="_classtests_1_1test__commit__commands_1_1TestCommitCommands">tests.test_commit_commands.TestCommitCommands</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Namespaces    </title>
+        <itemizedlist>
+            <listitem><para>namespace <link linkend="_namespacetests">tests</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacetests_1_1test__commit__commands">tests.test_commit_commands</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+</section>
diff --git a/docs345/docbook/test__config__commands_8py.xml b/docs345/docbook/test__config__commands_8py.xml
new file mode 100644
index 0000000..52541e5
--- /dev/null
+++ b/docs345/docbook/test__config__commands_8py.xml
@@ -0,0 +1,21 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_test__config__commands_8py" xml:lang="en-US">
+<title>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py File Reference</title>
+<indexterm><primary>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py</primary></indexterm>
+<simplesect>
+    <title>Classes    </title>
+        <itemizedlist>
+            <listitem><para>class <link linkend="_classtests_1_1test__config__commands_1_1TestConfigCommands">tests.test_config_commands.TestConfigCommands</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Namespaces    </title>
+        <itemizedlist>
+            <listitem><para>namespace <link linkend="_namespacetests">tests</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacetests_1_1test__config__commands">tests.test_config_commands</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+</section>
diff --git a/docs345/docbook/test__doc__commands_8py.xml b/docs345/docbook/test__doc__commands_8py.xml
new file mode 100644
index 0000000..2474e6f
--- /dev/null
+++ b/docs345/docbook/test__doc__commands_8py.xml
@@ -0,0 +1,41 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_test__doc__commands_8py" xml:lang="en-US">
+<title>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py File Reference</title>
+<indexterm><primary>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py</primary></indexterm>
+<simplesect>
+    <title>Namespaces    </title>
+        <itemizedlist>
+            <listitem><para>namespace <link linkend="_namespacetests">tests</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacetests_1_1test__doc__commands">tests.test_doc_commands</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Functions    </title>
+        <itemizedlist>
+            <listitem><para>def <link linkend="_namespacetests_1_1test__doc__commands_1a806110833eb0aad547156faf014b31d8">tests.test_doc_commands.test_generate_doc_no_location</link> (mock_getcwd, mock_api_client, mock_folder_analyzer, mock_file_analyzer, mock_git_analyzer)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacetests_1_1test__doc__commands_1a0e74c920f258f442914771164fe26b45">tests.test_doc_commands.test_generate_doc_file_location</link> (mock_api_client, mock_folder_analyzer, mock_file_analyzer, mock_git_analyzer)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacetests_1_1test__doc__commands_1a4bb75610e40d94d42bc169b25403c186">tests.test_doc_commands.test_generate_doc_folder_location</link> (mock_api_client, mock_folder_analyzer, mock_file_analyzer, mock_git_analyzer)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacetests_1_1test__doc__commands_1aec76cc25c23476794234cdadbcaef0c0">tests.test_doc_commands.test_generate_doc_error_handling</link> (mock_api_client, mock_git_analyzer, mock_exit)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacetests_1_1test__doc__commands_1a0f27751d0ba2acfe40ef7e85bccf47d7">tests.test_doc_commands.test_setup_docgen_parser</link> ()</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacetests_1_1test__doc__commands_1ab74688baa8c9b5ba302c2877a9789d05">tests.test_doc_commands.test_handle_docgen_install_hook</link> (mock_exit, mock_get_token, mock_generate_doc, mock_uninstall_hook, mock_install_hook)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacetests_1_1test__doc__commands_1a1458af9ad0128c3ca1263b552fd5e482">tests.test_doc_commands.test_handle_docgen_uninstall_hook</link> (mock_exit, mock_get_token, mock_generate_doc, mock_uninstall_hook, mock_install_hook)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacetests_1_1test__doc__commands_1ab158ffa48469b6c097a7a55fcb20c21a">tests.test_doc_commands.test_handle_docgen_generate</link> (mock_get_token, mock_generate_doc, mock_uninstall_hook, mock_install_hook)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacetests_1_1test__doc__commands_1af9b01e5fc89255cac96747fa081c442c">tests.test_doc_commands.test_handle_docgen_no_token</link> (mock_exit, mock_get_token)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacetests_1_1test__doc__commands_1a335e7fd4912192c7276cf31bbebc6eb0">tests.test_doc_commands.test_generate_doc_with_file_exception</link> (mock_api_client, mock_getcwd)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacetests_1_1test__doc__commands_1a64165ddfdb3071a88422f080f0e529a3">tests.test_doc_commands.test_generate_doc_with_folder_exception</link> (mock_api_client, mock_getcwd)</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+</section>
diff --git a/docs345/docbook/test__web__config_8py.xml b/docs345/docbook/test__web__config_8py.xml
new file mode 100644
index 0000000..4213ba9
--- /dev/null
+++ b/docs345/docbook/test__web__config_8py.xml
@@ -0,0 +1,21 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_test__web__config_8py" xml:lang="en-US">
+<title>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_web_config.py File Reference</title>
+<indexterm><primary>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_web_config.py</primary></indexterm>
+<simplesect>
+    <title>Classes    </title>
+        <itemizedlist>
+            <listitem><para>class <link linkend="_classtests_1_1test__web__config_1_1TestWebConfig">tests.test_web_config.TestWebConfig</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Namespaces    </title>
+        <itemizedlist>
+            <listitem><para>namespace <link linkend="_namespacetests">tests</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacetests_1_1test__web__config">tests.test_web_config</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+</section>
diff --git a/docs345/docbook/tests_2____init_____8py.xml b/docs345/docbook/tests_2____init_____8py.xml
new file mode 100644
index 0000000..590e194
--- /dev/null
+++ b/docs345/docbook/tests_2____init_____8py.xml
@@ -0,0 +1,12 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_tests_2____init_____8py" xml:lang="en-US">
+<title>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/__init__.py File Reference</title>
+<indexterm><primary>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/__init__.py</primary></indexterm>
+<simplesect>
+    <title>Namespaces    </title>
+        <itemizedlist>
+            <listitem><para>namespace <link linkend="_namespacetests">tests</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+</section>
diff --git a/docs345/docbook/ui__utils_8py.xml b/docs345/docbook/ui__utils_8py.xml
new file mode 100644
index 0000000..ad14fca
--- /dev/null
+++ b/docs345/docbook/ui__utils_8py.xml
@@ -0,0 +1,76 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_ui__utils_8py" xml:lang="en-US">
+<title>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py File Reference</title>
+<indexterm><primary>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py</primary></indexterm>
+<simplesect>
+    <title>Namespaces    </title>
+        <itemizedlist>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook">penify_hook</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook_1_1ui__utils">penify_hook.ui_utils</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Functions    </title>
+        <itemizedlist>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1ui__utils_1a92c3e466d1912058167be2eacf85b9f6">penify_hook.ui_utils.format_info</link> (message)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1ui__utils_1a532cdb4de7c679ce8b29c3e9116c4776">penify_hook.ui_utils.format_success</link> (message)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1ui__utils_1a0a6fd2613c6fe053b6e4356cd9e5cda2">penify_hook.ui_utils.format_warning</link> (message)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1ui__utils_1a4dd934568897433fa73f9cc182ac4a3e">penify_hook.ui_utils.format_error</link> (message)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1ui__utils_1adcb97fc26b405d2b9cdf5eb7aecc5452">penify_hook.ui_utils.format_highlight</link> (message)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1ui__utils_1af3441fb3c2c3850b8b3b6455a9fdaba4">penify_hook.ui_utils.format_file_path</link> (file_path)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44">penify_hook.ui_utils.print_info</link> (message)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1ui__utils_1a2b16aa6b68a9edea5f29f84f1c4be79a">penify_hook.ui_utils.print_success</link> (message)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1ui__utils_1a1ffbb9671dbe233770268e2dd66a67fa">penify_hook.ui_utils.print_warning</link> (message)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1ui__utils_1a6f0acd7dd91abfe67d0807803bc3b65f">penify_hook.ui_utils.print_error</link> (message)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1ui__utils_1adfcbbfe39029ab6d1dd33e7bf75ae115">penify_hook.ui_utils.print_processing</link> (file_path)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1ui__utils_1aa6e684c00e26199440137a87ed9b195c">penify_hook.ui_utils.print_status</link> (status, message)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1ui__utils_1a12b92532b1458af94f3649d411b5505c">penify_hook.ui_utils.create_progress_bar</link> (total, desc=&quot;Processing&quot;, unit=&quot;item&quot;)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1ui__utils_1a3da02cd1140179a9ce60f62c85fccfef">penify_hook.ui_utils.create_stage_progress_bar</link> (stages, desc=&quot;Processing&quot;)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1ui__utils_1a5a7340d0fc60fb80f17514d60bf45f1d">penify_hook.ui_utils.update_stage</link> (pbar, stage_name)</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Variables    </title>
+        <itemizedlist>
+            <listitem><para><link linkend="_namespacepenify__hook_1_1ui__utils_1ab560cfade398ac1e0bd47befb52d9f71">penify_hook.ui_utils.autoreset</link></para>
+</listitem>
+            <listitem><para><link linkend="_namespacepenify__hook_1_1ui__utils_1a9fdcb180915696f5d217032a62c3857c">penify_hook.ui_utils.INFO_COLOR</link> = Fore.CYAN</para>
+</listitem>
+            <listitem><para><link linkend="_namespacepenify__hook_1_1ui__utils_1a22c450c5e2b5394618ecf9b636560df4">penify_hook.ui_utils.SUCCESS_COLOR</link> = Fore.GREEN</para>
+</listitem>
+            <listitem><para><link linkend="_namespacepenify__hook_1_1ui__utils_1a177bc9b44157844c999e0c1c2c6936ff">penify_hook.ui_utils.WARNING_COLOR</link> = Fore.YELLOW</para>
+</listitem>
+            <listitem><para><link linkend="_namespacepenify__hook_1_1ui__utils_1a4ab4e61dfab7973c87bef59c6e1977fe">penify_hook.ui_utils.ERROR_COLOR</link> = Fore.RED</para>
+</listitem>
+            <listitem><para><link linkend="_namespacepenify__hook_1_1ui__utils_1aba01b8259f0d66cdc2b4a1b58f9736fc">penify_hook.ui_utils.HIGHLIGHT_COLOR</link> = Fore.BLUE</para>
+</listitem>
+            <listitem><para><link linkend="_namespacepenify__hook_1_1ui__utils_1aca0fcee81606857497520ae4290bc9f5">penify_hook.ui_utils.NEUTRAL_COLOR</link> = Fore.WHITE</para>
+</listitem>
+            <listitem><para>string <link linkend="_namespacepenify__hook_1_1ui__utils_1a3c6fe4bd17c1a5fe76587225ae4beb3e">penify_hook.ui_utils.SUCCESS_SYMBOL</link> = &quot;✓&quot;</para>
+</listitem>
+            <listitem><para>string <link linkend="_namespacepenify__hook_1_1ui__utils_1a6eaea98f1a8cbe16a181647da2fc0a16">penify_hook.ui_utils.WARNING_SYMBOL</link> = &quot;○&quot;</para>
+</listitem>
+            <listitem><para>string <link linkend="_namespacepenify__hook_1_1ui__utils_1aa564e1e1d016c8227d076542e74cecb0">penify_hook.ui_utils.ERROR_SYMBOL</link> = &quot;✗&quot;</para>
+</listitem>
+            <listitem><para>string <link linkend="_namespacepenify__hook_1_1ui__utils_1a3b208e2750a38dd09467a73e4afd9756">penify_hook.ui_utils.PROCESSING_SYMBOL</link> = &quot;⟳&quot;</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+</section>
diff --git a/docs345/docbook/utils_8py.xml b/docs345/docbook/utils_8py.xml
new file mode 100644
index 0000000..28c1b26
--- /dev/null
+++ b/docs345/docbook/utils_8py.xml
@@ -0,0 +1,39 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_utils_8py" xml:lang="en-US">
+<title>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/utils.py File Reference</title>
+<indexterm><primary>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/utils.py</primary></indexterm>
+<simplesect>
+    <title>Classes    </title>
+        <itemizedlist>
+            <listitem><para>class <link linkend="_classpenify__hook_1_1utils_1_1GitRepoNotFoundError">penify_hook.utils.GitRepoNotFoundError</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Namespaces    </title>
+        <itemizedlist>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook">penify_hook</link></para>
+</listitem>
+            <listitem><para>namespace <link linkend="_namespacepenify__hook_1_1utils">penify_hook.utils</link></para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Functions    </title>
+        <itemizedlist>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1utils_1ae236f3c4c8bf5dcddbb92b4c2065eea3">penify_hook.utils.get_repo_details</link> (Repo repo)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1utils_1a95c3f9c80860d6a2e2d061d2fb660a3f">penify_hook.utils.recursive_search_git_folder</link> (folder_path)</para>
+</listitem>
+            <listitem><para>def <link linkend="_namespacepenify__hook_1_1utils_1a4ec5335a4026c22a34a3a8ccf665a5f2">penify_hook.utils.find_git_parent</link> (path)</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+<simplesect>
+    <title>Variables    </title>
+        <itemizedlist>
+            <listitem><para><link linkend="_namespacepenify__hook_1_1utils_1a0c0c1ed6b197038085c94a90ceedfb01">penify_hook.utils.logger</link> = logging.getLogger(__name__)</para>
+</listitem>
+        </itemizedlist>
+</simplesect>
+</section>
diff --git a/docs345/xml/Doxyfile.xml b/docs345/xml/Doxyfile.xml
new file mode 100644
index 0000000..f332857
--- /dev/null
+++ b/docs345/xml/Doxyfile.xml
@@ -0,0 +1,391 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxyfile xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="doxyfile.xsd" version="1.9.4" xml:lang="en-US">
+  <option  id='DOXYFILE_ENCODING' default='yes' type='string'><value><![CDATA[UTF-8]]></value></option>
+  <option  id='PROJECT_NAME' default='no' type='string'><value><![CDATA[penify-cli]]></value></option>
+  <option  id='PROJECT_NUMBER' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='PROJECT_BRIEF' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='PROJECT_LOGO' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='OUTPUT_DIRECTORY' default='no' type='string'><value><![CDATA[/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/../doc_penify-cli/docs]]></value></option>
+  <option  id='CREATE_SUBDIRS' default='yes' type='bool'><value>NO</value></option>
+  <option  id='CREATE_SUBDIRS_LEVEL' default='yes' type='int'><value>8</value></option>
+  <option  id='ALLOW_UNICODE_NAMES' default='yes' type='bool'><value>NO</value></option>
+  <option  id='OUTPUT_LANGUAGE' default='yes' type='string'><value>English</value></option>
+  <option  id='BRIEF_MEMBER_DESC' default='yes' type='bool'><value>YES</value></option>
+  <option  id='REPEAT_BRIEF' default='yes' type='bool'><value>YES</value></option>
+  <option  id='ABBREVIATE_BRIEF' default='yes' type='stringlist'>
+    <value><![CDATA["The $name class"]]></value>
+    <value><![CDATA["The $name widget"]]></value>
+    <value><![CDATA["The $name file"]]></value>
+    <value><![CDATA[is]]></value>
+    <value><![CDATA[provides]]></value>
+    <value><![CDATA[specifies]]></value>
+    <value><![CDATA[contains]]></value>
+    <value><![CDATA[represents]]></value>
+    <value><![CDATA[a]]></value>
+    <value><![CDATA[an]]></value>
+    <value><![CDATA[the]]></value>
+  </option>
+  <option  id='ALWAYS_DETAILED_SEC' default='yes' type='bool'><value>NO</value></option>
+  <option  id='INLINE_INHERITED_MEMB' default='yes' type='bool'><value>NO</value></option>
+  <option  id='FULL_PATH_NAMES' default='yes' type='bool'><value>YES</value></option>
+  <option  id='STRIP_FROM_PATH' default='yes' type='stringlist'>
+  </option>
+  <option  id='STRIP_FROM_INC_PATH' default='yes' type='stringlist'>
+  </option>
+  <option  id='SHORT_NAMES' default='yes' type='bool'><value>NO</value></option>
+  <option  id='JAVADOC_AUTOBRIEF' default='yes' type='bool'><value>NO</value></option>
+  <option  id='JAVADOC_BANNER' default='yes' type='bool'><value>NO</value></option>
+  <option  id='QT_AUTOBRIEF' default='yes' type='bool'><value>NO</value></option>
+  <option  id='MULTILINE_CPP_IS_BRIEF' default='yes' type='bool'><value>NO</value></option>
+  <option  id='PYTHON_DOCSTRING' default='yes' type='bool'><value>YES</value></option>
+  <option  id='INHERIT_DOCS' default='yes' type='bool'><value>YES</value></option>
+  <option  id='SEPARATE_MEMBER_PAGES' default='yes' type='bool'><value>NO</value></option>
+  <option  id='TAB_SIZE' default='yes' type='int'><value>4</value></option>
+  <option  id='ALIASES' default='yes' type='stringlist'>
+  </option>
+  <option  id='OPTIMIZE_OUTPUT_FOR_C' default='yes' type='bool'><value>NO</value></option>
+  <option  id='OPTIMIZE_OUTPUT_JAVA' default='yes' type='bool'><value>NO</value></option>
+  <option  id='OPTIMIZE_FOR_FORTRAN' default='yes' type='bool'><value>NO</value></option>
+  <option  id='OPTIMIZE_OUTPUT_VHDL' default='yes' type='bool'><value>NO</value></option>
+  <option  id='OPTIMIZE_OUTPUT_SLICE' default='yes' type='bool'><value>NO</value></option>
+  <option  id='EXTENSION_MAPPING' default='yes' type='stringlist'>
+  </option>
+  <option  id='MARKDOWN_SUPPORT' default='yes' type='bool'><value>YES</value></option>
+  <option  id='TOC_INCLUDE_HEADINGS' default='yes' type='int'><value>5</value></option>
+  <option  id='AUTOLINK_SUPPORT' default='yes' type='bool'><value>YES</value></option>
+  <option  id='BUILTIN_STL_SUPPORT' default='no' type='bool'><value>YES</value></option>
+  <option  id='CPP_CLI_SUPPORT' default='yes' type='bool'><value>NO</value></option>
+  <option  id='SIP_SUPPORT' default='yes' type='bool'><value>NO</value></option>
+  <option  id='IDL_PROPERTY_SUPPORT' default='yes' type='bool'><value>YES</value></option>
+  <option  id='DISTRIBUTE_GROUP_DOC' default='yes' type='bool'><value>NO</value></option>
+  <option  id='GROUP_NESTED_COMPOUNDS' default='yes' type='bool'><value>NO</value></option>
+  <option  id='SUBGROUPING' default='yes' type='bool'><value>YES</value></option>
+  <option  id='INLINE_GROUPED_CLASSES' default='yes' type='bool'><value>NO</value></option>
+  <option  id='INLINE_SIMPLE_STRUCTS' default='yes' type='bool'><value>NO</value></option>
+  <option  id='TYPEDEF_HIDES_STRUCT' default='yes' type='bool'><value>NO</value></option>
+  <option  id='LOOKUP_CACHE_SIZE' default='yes' type='int'><value>0</value></option>
+  <option  id='NUM_PROC_THREADS' default='yes' type='int'><value>1</value></option>
+  <option  id='EXTRACT_ALL' default='no' type='bool'><value>YES</value></option>
+  <option  id='EXTRACT_PRIVATE' default='no' type='bool'><value>YES</value></option>
+  <option  id='EXTRACT_PRIV_VIRTUAL' default='yes' type='bool'><value>NO</value></option>
+  <option  id='EXTRACT_PACKAGE' default='yes' type='bool'><value>NO</value></option>
+  <option  id='EXTRACT_STATIC' default='no' type='bool'><value>YES</value></option>
+  <option  id='EXTRACT_LOCAL_CLASSES' default='yes' type='bool'><value>YES</value></option>
+  <option  id='EXTRACT_LOCAL_METHODS' default='yes' type='bool'><value>NO</value></option>
+  <option  id='EXTRACT_ANON_NSPACES' default='yes' type='bool'><value>NO</value></option>
+  <option  id='RESOLVE_UNNAMED_PARAMS' default='yes' type='bool'><value>YES</value></option>
+  <option  id='HIDE_UNDOC_MEMBERS' default='yes' type='bool'><value>NO</value></option>
+  <option  id='HIDE_UNDOC_CLASSES' default='yes' type='bool'><value>NO</value></option>
+  <option  id='HIDE_FRIEND_COMPOUNDS' default='yes' type='bool'><value>NO</value></option>
+  <option  id='HIDE_IN_BODY_DOCS' default='yes' type='bool'><value>NO</value></option>
+  <option  id='INTERNAL_DOCS' default='yes' type='bool'><value>NO</value></option>
+  <option  id='CASE_SENSE_NAMES' default='yes' type='bool'><value>YES</value></option>
+  <option  id='HIDE_SCOPE_NAMES' default='yes' type='bool'><value>NO</value></option>
+  <option  id='HIDE_COMPOUND_REFERENCE' default='yes' type='bool'><value>NO</value></option>
+  <option  id='SHOW_HEADERFILE' default='yes' type='bool'><value>YES</value></option>
+  <option  id='SHOW_INCLUDE_FILES' default='yes' type='bool'><value>YES</value></option>
+  <option  id='SHOW_GROUPED_MEMB_INC' default='yes' type='bool'><value>NO</value></option>
+  <option  id='FORCE_LOCAL_INCLUDES' default='yes' type='bool'><value>NO</value></option>
+  <option  id='INLINE_INFO' default='yes' type='bool'><value>YES</value></option>
+  <option  id='SORT_MEMBER_DOCS' default='yes' type='bool'><value>YES</value></option>
+  <option  id='SORT_BRIEF_DOCS' default='yes' type='bool'><value>NO</value></option>
+  <option  id='SORT_MEMBERS_CTORS_1ST' default='yes' type='bool'><value>NO</value></option>
+  <option  id='SORT_GROUP_NAMES' default='yes' type='bool'><value>NO</value></option>
+  <option  id='SORT_BY_SCOPE_NAME' default='yes' type='bool'><value>NO</value></option>
+  <option  id='STRICT_PROTO_MATCHING' default='yes' type='bool'><value>NO</value></option>
+  <option  id='GENERATE_TODOLIST' default='yes' type='bool'><value>YES</value></option>
+  <option  id='GENERATE_TESTLIST' default='yes' type='bool'><value>YES</value></option>
+  <option  id='GENERATE_BUGLIST' default='yes' type='bool'><value>YES</value></option>
+  <option  id='GENERATE_DEPRECATEDLIST' default='yes' type='bool'><value>YES</value></option>
+  <option  id='ENABLED_SECTIONS' default='yes' type='stringlist'>
+  </option>
+  <option  id='MAX_INITIALIZER_LINES' default='yes' type='int'><value>30</value></option>
+  <option  id='SHOW_USED_FILES' default='yes' type='bool'><value>YES</value></option>
+  <option  id='SHOW_FILES' default='yes' type='bool'><value>YES</value></option>
+  <option  id='SHOW_NAMESPACES' default='yes' type='bool'><value>YES</value></option>
+  <option  id='FILE_VERSION_FILTER' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='LAYOUT_FILE' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='CITE_BIB_FILES' default='yes' type='stringlist'>
+  </option>
+  <option  id='QUIET' default='no' type='bool'><value>YES</value></option>
+  <option  id='WARNINGS' default='no' type='bool'><value>NO</value></option>
+  <option  id='WARN_IF_UNDOCUMENTED' default='no' type='bool'><value>NO</value></option>
+  <option  id='WARN_IF_DOC_ERROR' default='no' type='bool'><value>NO</value></option>
+  <option  id='WARN_IF_INCOMPLETE_DOC' default='yes' type='bool'><value>YES</value></option>
+  <option  id='WARN_NO_PARAMDOC' default='yes' type='bool'><value>NO</value></option>
+  <option  id='WARN_AS_ERROR' default='yes' type='string'><value>NO</value></option>
+  <option  id='WARN_FORMAT' default='yes' type='string'><value><![CDATA["$file:$line: $text"]]></value></option>
+  <option  id='WARN_LINE_FORMAT' default='yes' type='string'><value><![CDATA["at line $line of file $file"]]></value></option>
+  <option  id='WARN_LOGFILE' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='INPUT' default='no' type='stringlist'>
+    <value><![CDATA[/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli]]></value>
+  </option>
+  <option  id='INPUT_ENCODING' default='yes' type='string'><value><![CDATA[UTF-8]]></value></option>
+  <option  id='FILE_PATTERNS' default='yes' type='stringlist'>
+    <value><![CDATA[*.c]]></value>
+    <value><![CDATA[*.cc]]></value>
+    <value><![CDATA[*.cxx]]></value>
+    <value><![CDATA[*.cpp]]></value>
+    <value><![CDATA[*.c++]]></value>
+    <value><![CDATA[*.java]]></value>
+    <value><![CDATA[*.ii]]></value>
+    <value><![CDATA[*.ixx]]></value>
+    <value><![CDATA[*.ipp]]></value>
+    <value><![CDATA[*.i++]]></value>
+    <value><![CDATA[*.inl]]></value>
+    <value><![CDATA[*.idl]]></value>
+    <value><![CDATA[*.ddl]]></value>
+    <value><![CDATA[*.odl]]></value>
+    <value><![CDATA[*.h]]></value>
+    <value><![CDATA[*.hh]]></value>
+    <value><![CDATA[*.hxx]]></value>
+    <value><![CDATA[*.hpp]]></value>
+    <value><![CDATA[*.h++]]></value>
+    <value><![CDATA[*.l]]></value>
+    <value><![CDATA[*.cs]]></value>
+    <value><![CDATA[*.d]]></value>
+    <value><![CDATA[*.php]]></value>
+    <value><![CDATA[*.php4]]></value>
+    <value><![CDATA[*.php5]]></value>
+    <value><![CDATA[*.phtml]]></value>
+    <value><![CDATA[*.inc]]></value>
+    <value><![CDATA[*.m]]></value>
+    <value><![CDATA[*.markdown]]></value>
+    <value><![CDATA[*.md]]></value>
+    <value><![CDATA[*.mm]]></value>
+    <value><![CDATA[*.dox]]></value>
+    <value><![CDATA[*.py]]></value>
+    <value><![CDATA[*.pyw]]></value>
+    <value><![CDATA[*.f90]]></value>
+    <value><![CDATA[*.f95]]></value>
+    <value><![CDATA[*.f03]]></value>
+    <value><![CDATA[*.f08]]></value>
+    <value><![CDATA[*.f18]]></value>
+    <value><![CDATA[*.f]]></value>
+    <value><![CDATA[*.for]]></value>
+    <value><![CDATA[*.vhd]]></value>
+    <value><![CDATA[*.vhdl]]></value>
+    <value><![CDATA[*.ucf]]></value>
+    <value><![CDATA[*.qsf]]></value>
+    <value><![CDATA[*.ice]]></value>
+  </option>
+  <option  id='RECURSIVE' default='no' type='bool'><value>YES</value></option>
+  <option  id='EXCLUDE' default='yes' type='stringlist'>
+  </option>
+  <option  id='EXCLUDE_SYMLINKS' default='yes' type='bool'><value>NO</value></option>
+  <option  id='EXCLUDE_PATTERNS' default='yes' type='stringlist'>
+  </option>
+  <option  id='EXCLUDE_SYMBOLS' default='yes' type='stringlist'>
+  </option>
+  <option  id='EXAMPLE_PATH' default='yes' type='stringlist'>
+  </option>
+  <option  id='EXAMPLE_PATTERNS' default='yes' type='stringlist'>
+    <value><![CDATA[*]]></value>
+  </option>
+  <option  id='EXAMPLE_RECURSIVE' default='yes' type='bool'><value>NO</value></option>
+  <option  id='IMAGE_PATH' default='yes' type='stringlist'>
+  </option>
+  <option  id='INPUT_FILTER' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='FILTER_PATTERNS' default='yes' type='stringlist'>
+  </option>
+  <option  id='FILTER_SOURCE_FILES' default='yes' type='bool'><value>NO</value></option>
+  <option  id='FILTER_SOURCE_PATTERNS' default='yes' type='stringlist'>
+  </option>
+  <option  id='USE_MDFILE_AS_MAINPAGE' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='SOURCE_BROWSER' default='yes' type='bool'><value>NO</value></option>
+  <option  id='INLINE_SOURCES' default='yes' type='bool'><value>NO</value></option>
+  <option  id='STRIP_CODE_COMMENTS' default='yes' type='bool'><value>YES</value></option>
+  <option  id='REFERENCED_BY_RELATION' default='yes' type='bool'><value>NO</value></option>
+  <option  id='REFERENCES_RELATION' default='yes' type='bool'><value>NO</value></option>
+  <option  id='REFERENCES_LINK_SOURCE' default='yes' type='bool'><value>YES</value></option>
+  <option  id='SOURCE_TOOLTIPS' default='yes' type='bool'><value>YES</value></option>
+  <option  id='USE_HTAGS' default='yes' type='bool'><value>NO</value></option>
+  <option  id='VERBATIM_HEADERS' default='yes' type='bool'><value>YES</value></option>
+  <option  id='CLANG_ASSISTED_PARSING' default='yes' type='bool'><value>NO</value></option>
+  <option  id='CLANG_ADD_INC_PATHS' default='yes' type='bool'><value>YES</value></option>
+  <option  id='CLANG_OPTIONS' default='yes' type='stringlist'>
+  </option>
+  <option  id='CLANG_DATABASE_PATH' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='ALPHABETICAL_INDEX' default='yes' type='bool'><value>YES</value></option>
+  <option  id='IGNORE_PREFIX' default='yes' type='stringlist'>
+  </option>
+  <option  id='GENERATE_HTML' default='no' type='bool'><value>NO</value></option>
+  <option  id='HTML_OUTPUT' default='yes' type='string'><value><![CDATA[html]]></value></option>
+  <option  id='HTML_FILE_EXTENSION' default='yes' type='string'><value><![CDATA[.html]]></value></option>
+  <option  id='HTML_HEADER' default='no' type='string'><value><![CDATA[./header.html]]></value></option>
+  <option  id='HTML_FOOTER' default='no' type='string'><value><![CDATA[./footer.html]]></value></option>
+  <option  id='HTML_STYLESHEET' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='HTML_EXTRA_STYLESHEET' default='no' type='stringlist'>
+    <value><![CDATA[./doxygen-awesome-css/doxygen-awesome.css]]></value>
+    <value><![CDATA[./doxygen-awesome-css/doxygen-awesome-sidebar-only.css]]></value>
+    <value><![CDATA[./doxygen-awesome-css/doxygen-awesome-sidebar-only-darkmode-toggle.css]]></value>
+  </option>
+  <option  id='HTML_EXTRA_FILES' default='no' type='stringlist'>
+    <value><![CDATA[./doxygen-awesome-css/toggle-alternative-theme.js]]></value>
+    <value><![CDATA[./doxygen-awesome-css/doxygen-awesome-darkmode-toggle.js]]></value>
+    <value><![CDATA[./doxygen-awesome-css/doxygen-awesome-fragment-copy-button.js]]></value>
+    <value><![CDATA[./doxygen-awesome-css/doxygen-awesome-interactive-toc.js]]></value>
+    <value><![CDATA[./doxygen-awesome-css/doxygen-awesome-paragraph-link.js]]></value>
+    <value><![CDATA[./doxygen-awesome-css/doxygen-awesome-tabs.js]]></value>
+  </option>
+  <option  id='HTML_COLORSTYLE_HUE' default='yes' type='int'><value>220</value></option>
+  <option  id='HTML_COLORSTYLE_SAT' default='yes' type='int'><value>100</value></option>
+  <option  id='HTML_COLORSTYLE_GAMMA' default='yes' type='int'><value>80</value></option>
+  <option  id='HTML_TIMESTAMP' default='yes' type='bool'><value>NO</value></option>
+  <option  id='HTML_DYNAMIC_MENUS' default='yes' type='bool'><value>YES</value></option>
+  <option  id='HTML_DYNAMIC_SECTIONS' default='yes' type='bool'><value>NO</value></option>
+  <option  id='HTML_INDEX_NUM_ENTRIES' default='yes' type='int'><value>100</value></option>
+  <option  id='GENERATE_DOCSET' default='yes' type='bool'><value>NO</value></option>
+  <option  id='DOCSET_FEEDNAME' default='yes' type='string'><value><![CDATA["Doxygen generated docs"]]></value></option>
+  <option  id='DOCSET_FEEDURL' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='DOCSET_BUNDLE_ID' default='yes' type='string'><value><![CDATA[org.doxygen.Project]]></value></option>
+  <option  id='DOCSET_PUBLISHER_ID' default='yes' type='string'><value><![CDATA[org.doxygen.Publisher]]></value></option>
+  <option  id='DOCSET_PUBLISHER_NAME' default='yes' type='string'><value><![CDATA[Publisher]]></value></option>
+  <option  id='GENERATE_HTMLHELP' default='yes' type='bool'><value>NO</value></option>
+  <option  id='CHM_FILE' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='HHC_LOCATION' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='GENERATE_CHI' default='yes' type='bool'><value>NO</value></option>
+  <option  id='CHM_INDEX_ENCODING' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='BINARY_TOC' default='yes' type='bool'><value>NO</value></option>
+  <option  id='TOC_EXPAND' default='yes' type='bool'><value>NO</value></option>
+  <option  id='GENERATE_QHP' default='yes' type='bool'><value>NO</value></option>
+  <option  id='QCH_FILE' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='QHP_NAMESPACE' default='yes' type='string'><value><![CDATA[org.doxygen.Project]]></value></option>
+  <option  id='QHP_VIRTUAL_FOLDER' default='yes' type='string'><value><![CDATA[doc]]></value></option>
+  <option  id='QHP_CUST_FILTER_NAME' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='QHP_CUST_FILTER_ATTRS' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='QHP_SECT_FILTER_ATTRS' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='QHG_LOCATION' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='GENERATE_ECLIPSEHELP' default='yes' type='bool'><value>NO</value></option>
+  <option  id='ECLIPSE_DOC_ID' default='yes' type='string'><value><![CDATA[org.doxygen.Project]]></value></option>
+  <option  id='DISABLE_INDEX' default='yes' type='bool'><value>NO</value></option>
+  <option  id='GENERATE_TREEVIEW' default='no' type='bool'><value>YES</value></option>
+  <option  id='FULL_SIDEBAR' default='no' type='bool'><value>YES</value></option>
+  <option  id='ENUM_VALUES_PER_LINE' default='yes' type='int'><value>4</value></option>
+  <option  id='TREEVIEW_WIDTH' default='yes' type='int'><value>250</value></option>
+  <option  id='EXT_LINKS_IN_WINDOW' default='yes' type='bool'><value>NO</value></option>
+  <option  id='OBFUSCATE_EMAILS' default='yes' type='bool'><value>YES</value></option>
+  <option  id='HTML_FORMULA_FORMAT' default='yes' type='string'><value>png</value></option>
+  <option  id='FORMULA_FONTSIZE' default='yes' type='int'><value>10</value></option>
+  <option  id='FORMULA_TRANSPARENT' default='yes' type='bool'><value>YES</value></option>
+  <option  id='FORMULA_MACROFILE' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='USE_MATHJAX' default='yes' type='bool'><value>NO</value></option>
+  <option  id='MATHJAX_VERSION' default='yes' type='string'><value>MathJax_2</value></option>
+  <option  id='MATHJAX_FORMAT' default='yes' type='string'><value>HTML-CSS</value></option>
+  <option  id='MATHJAX_RELPATH' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='MATHJAX_EXTENSIONS' default='yes' type='stringlist'>
+  </option>
+  <option  id='MATHJAX_CODEFILE' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='SEARCHENGINE' default='yes' type='bool'><value>YES</value></option>
+  <option  id='SERVER_BASED_SEARCH' default='yes' type='bool'><value>NO</value></option>
+  <option  id='EXTERNAL_SEARCH' default='yes' type='bool'><value>NO</value></option>
+  <option  id='SEARCHENGINE_URL' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='SEARCHDATA_FILE' default='yes' type='string'><value><![CDATA[searchdata.xml]]></value></option>
+  <option  id='EXTERNAL_SEARCH_ID' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='EXTRA_SEARCH_MAPPINGS' default='yes' type='stringlist'>
+  </option>
+  <option  id='GENERATE_LATEX' default='no' type='bool'><value>NO</value></option>
+  <option  id='LATEX_OUTPUT' default='yes' type='string'><value><![CDATA[latex]]></value></option>
+  <option  id='LATEX_CMD_NAME' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='MAKEINDEX_CMD_NAME' default='yes' type='string'><value><![CDATA[makeindex]]></value></option>
+  <option  id='LATEX_MAKEINDEX_CMD' default='yes' type='string'><value><![CDATA[makeindex]]></value></option>
+  <option  id='COMPACT_LATEX' default='yes' type='bool'><value>NO</value></option>
+  <option  id='PAPER_TYPE' default='yes' type='string'><value>a4</value></option>
+  <option  id='EXTRA_PACKAGES' default='yes' type='stringlist'>
+  </option>
+  <option  id='LATEX_HEADER' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='LATEX_FOOTER' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='LATEX_EXTRA_STYLESHEET' default='yes' type='stringlist'>
+  </option>
+  <option  id='LATEX_EXTRA_FILES' default='yes' type='stringlist'>
+  </option>
+  <option  id='PDF_HYPERLINKS' default='yes' type='bool'><value>YES</value></option>
+  <option  id='USE_PDFLATEX' default='yes' type='bool'><value>YES</value></option>
+  <option  id='LATEX_BATCHMODE' default='yes' type='bool'><value>NO</value></option>
+  <option  id='LATEX_HIDE_INDICES' default='yes' type='bool'><value>NO</value></option>
+  <option  id='LATEX_BIB_STYLE' default='yes' type='string'><value><![CDATA[plain]]></value></option>
+  <option  id='LATEX_TIMESTAMP' default='yes' type='bool'><value>NO</value></option>
+  <option  id='LATEX_EMOJI_DIRECTORY' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='GENERATE_RTF' default='yes' type='bool'><value>NO</value></option>
+  <option  id='RTF_OUTPUT' default='yes' type='string'><value><![CDATA[rtf]]></value></option>
+  <option  id='COMPACT_RTF' default='yes' type='bool'><value>NO</value></option>
+  <option  id='RTF_HYPERLINKS' default='yes' type='bool'><value>NO</value></option>
+  <option  id='RTF_STYLESHEET_FILE' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='RTF_EXTENSIONS_FILE' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='GENERATE_MAN' default='yes' type='bool'><value>NO</value></option>
+  <option  id='MAN_OUTPUT' default='yes' type='string'><value><![CDATA[man]]></value></option>
+  <option  id='MAN_EXTENSION' default='yes' type='string'><value><![CDATA[.3]]></value></option>
+  <option  id='MAN_SUBDIR' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='MAN_LINKS' default='yes' type='bool'><value>NO</value></option>
+  <option  id='GENERATE_XML' default='no' type='bool'><value>YES</value></option>
+  <option  id='XML_OUTPUT' default='yes' type='string'><value><![CDATA[xml]]></value></option>
+  <option  id='XML_PROGRAMLISTING' default='yes' type='bool'><value>YES</value></option>
+  <option  id='XML_NS_MEMB_FILE_SCOPE' default='yes' type='bool'><value>NO</value></option>
+  <option  id='GENERATE_DOCBOOK' default='no' type='bool'><value>YES</value></option>
+  <option  id='DOCBOOK_OUTPUT' default='yes' type='string'><value><![CDATA[docbook]]></value></option>
+  <option  id='GENERATE_AUTOGEN_DEF' default='yes' type='bool'><value>NO</value></option>
+  <option  id='GENERATE_PERLMOD' default='yes' type='bool'><value>NO</value></option>
+  <option  id='PERLMOD_LATEX' default='yes' type='bool'><value>NO</value></option>
+  <option  id='PERLMOD_PRETTY' default='yes' type='bool'><value>YES</value></option>
+  <option  id='PERLMOD_MAKEVAR_PREFIX' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='ENABLE_PREPROCESSING' default='yes' type='bool'><value>YES</value></option>
+  <option  id='MACRO_EXPANSION' default='yes' type='bool'><value>NO</value></option>
+  <option  id='EXPAND_ONLY_PREDEF' default='yes' type='bool'><value>NO</value></option>
+  <option  id='SEARCH_INCLUDES' default='yes' type='bool'><value>YES</value></option>
+  <option  id='INCLUDE_PATH' default='yes' type='stringlist'>
+  </option>
+  <option  id='INCLUDE_FILE_PATTERNS' default='yes' type='stringlist'>
+  </option>
+  <option  id='PREDEFINED' default='yes' type='stringlist'>
+  </option>
+  <option  id='EXPAND_AS_DEFINED' default='yes' type='stringlist'>
+  </option>
+  <option  id='SKIP_FUNCTION_MACROS' default='yes' type='bool'><value>YES</value></option>
+  <option  id='TAGFILES' default='yes' type='stringlist'>
+  </option>
+  <option  id='GENERATE_TAGFILE' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='ALLEXTERNALS' default='yes' type='bool'><value>NO</value></option>
+  <option  id='EXTERNAL_GROUPS' default='yes' type='bool'><value>YES</value></option>
+  <option  id='EXTERNAL_PAGES' default='yes' type='bool'><value>YES</value></option>
+  <option  id='DIA_PATH' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='HIDE_UNDOC_RELATIONS' default='no' type='bool'><value>NO</value></option>
+  <option  id='HAVE_DOT' default='yes' type='bool'><value>YES</value></option>
+  <option  id='DOT_NUM_THREADS' default='yes' type='int'><value>0</value></option>
+  <option  id='DOT_FONTNAME' default='yes' type='string'><value><![CDATA[Helvetica]]></value></option>
+  <option  id='DOT_FONTSIZE' default='yes' type='int'><value>10</value></option>
+  <option  id='DOT_FONTPATH' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='CLASS_GRAPH' default='yes' type='string'><value>YES</value></option>
+  <option  id='COLLABORATION_GRAPH' default='yes' type='bool'><value>YES</value></option>
+  <option  id='GROUP_GRAPHS' default='yes' type='bool'><value>YES</value></option>
+  <option  id='UML_LOOK' default='no' type='bool'><value>YES</value></option>
+  <option  id='UML_LIMIT_NUM_FIELDS' default='yes' type='int'><value>10</value></option>
+  <option  id='DOT_UML_DETAILS' default='yes' type='string'><value>NO</value></option>
+  <option  id='DOT_WRAP_THRESHOLD' default='yes' type='int'><value>17</value></option>
+  <option  id='TEMPLATE_RELATIONS' default='yes' type='bool'><value>NO</value></option>
+  <option  id='INCLUDE_GRAPH' default='yes' type='bool'><value>YES</value></option>
+  <option  id='INCLUDED_BY_GRAPH' default='yes' type='bool'><value>YES</value></option>
+  <option  id='CALL_GRAPH' default='no' type='bool'><value>YES</value></option>
+  <option  id='CALLER_GRAPH' default='no' type='bool'><value>YES</value></option>
+  <option  id='GRAPHICAL_HIERARCHY' default='yes' type='bool'><value>YES</value></option>
+  <option  id='DIRECTORY_GRAPH' default='yes' type='bool'><value>YES</value></option>
+  <option  id='DIR_GRAPH_MAX_DEPTH' default='yes' type='int'><value>1</value></option>
+  <option  id='DOT_IMAGE_FORMAT' default='no' type='string'><value>svg</value></option>
+  <option  id='INTERACTIVE_SVG' default='no' type='bool'><value>YES</value></option>
+  <option  id='DOT_PATH' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='DOTFILE_DIRS' default='yes' type='stringlist'>
+  </option>
+  <option  id='MSCFILE_DIRS' default='yes' type='stringlist'>
+  </option>
+  <option  id='DIAFILE_DIRS' default='yes' type='stringlist'>
+  </option>
+  <option  id='PLANTUML_JAR_PATH' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='PLANTUML_CFG_FILE' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='PLANTUML_INCLUDE_PATH' default='yes' type='stringlist'>
+  </option>
+  <option  id='DOT_GRAPH_MAX_NODES' default='no' type='int'><value>120</value></option>
+  <option  id='MAX_DOT_GRAPH_DEPTH' default='yes' type='int'><value>0</value></option>
+  <option  id='DOT_TRANSPARENT' default='yes' type='bool'><value>NO</value></option>
+  <option  id='DOT_MULTI_TARGETS' default='yes' type='bool'><value>NO</value></option>
+  <option  id='GENERATE_LEGEND' default='yes' type='bool'><value>YES</value></option>
+  <option  id='DOT_CLEANUP' default='yes' type='bool'><value>YES</value></option>
+</doxyfile>
diff --git a/docs345/xml/README_8md.xml b/docs345/xml/README_8md.xml
new file mode 100644
index 0000000..d74636f
--- /dev/null
+++ b/docs345/xml/README_8md.xml
@@ -0,0 +1,179 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="README_8md" kind="file" language="Markdown">
+    <compoundname>README.md</compoundname>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline><highlight class="normal">#<sp/>Penify<sp/>CLI<sp/>Tool</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">![Tests](https://github.com/yourorganization/penify-cli/workflows/Tests/badge.svg)</highlight></codeline>
+<codeline><highlight class="normal">![Coverage](./coverage.svg)</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">A<sp/>CLI<sp/>tool<sp/>to<sp/>generate<sp/>smart<sp/>commit<sp/>messages,<sp/>code<sp/>documentation,<sp/>and<sp/>more.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Features</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>Automatically<sp/>generate<sp/>documentation<sp/>for<sp/>your<sp/>code</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Support<sp/>for<sp/>multiple<sp/>programming<sp/>languages</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Git<sp/>hook<sp/>integration<sp/>for<sp/>automatic<sp/>documentation<sp/>on<sp/>commits</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Folder<sp/>and<sp/>file<sp/>analysis</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Installation</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Install<sp/>from<sp/>PyPI:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">pip<sp/>install<sp/>penify</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Usage</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Penify<sp/>CLI<sp/>provides<sp/>several<sp/>subcommands<sp/>for<sp/>different<sp/>functionalities,<sp/>organized<sp/>into<sp/>basic<sp/>commands<sp/>(no<sp/>login<sp/>required)<sp/>and<sp/>advanced<sp/>commands<sp/>(login<sp/>required).</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Basic<sp/>Commands<sp/>(No<sp/>login<sp/>required)</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Commit</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Generate<sp/>smart<sp/>commit<sp/>messages<sp/>using<sp/>local<sp/>LLM:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>commit<sp/>[-m<sp/>&quot;Optional<sp/>message&quot;]<sp/>[-e]<sp/>[-d]</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Options:</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>`-m,<sp/>--message`:<sp/>Optional<sp/>custom<sp/>commit<sp/>message</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>`-e,<sp/>--terminal`:<sp/>Open<sp/>editor<sp/>to<sp/>modify<sp/>commit<sp/>message<sp/>before<sp/>committing</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>`-d,<sp/>--description`:<sp/>Generate<sp/>commit<sp/>message<sp/>with<sp/>both<sp/>title<sp/>and<sp/>description<sp/>(without<sp/>this<sp/>flag,<sp/>only<sp/>title<sp/>is<sp/>generated)</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Config</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Configure<sp/>local<sp/>LLM<sp/>and<sp/>JIRA<sp/>settings:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Configure<sp/>LLM<sp/>settings</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>config<sp/>llm<sp/>--model<sp/>MODEL_NAME<sp/>[--api-base<sp/>API_URL]<sp/>[--api-key<sp/>API_KEY]</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Configure<sp/>LLM<sp/>settings<sp/>through<sp/>web<sp/>interface</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>config<sp/>llm-web</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Configure<sp/>JIRA<sp/>settings</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>config<sp/>jira<sp/>--url<sp/>JIRA_URL<sp/>--username<sp/>USERNAME<sp/>--api-token<sp/>TOKEN<sp/>[--verify]</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Configure<sp/>JIRA<sp/>settings<sp/>through<sp/>web<sp/>interface</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>config<sp/>jira-web</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Advanced<sp/>Commands<sp/>(Login<sp/>required)</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Login</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">To<sp/>log<sp/>in<sp/>and<sp/>obtain<sp/>an<sp/>API<sp/>token:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>login</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">This<sp/>command<sp/>will<sp/>open<sp/>a<sp/>browser<sp/>window<sp/>for<sp/>authentication.<sp/>After<sp/>successful<sp/>login,<sp/>the<sp/>API<sp/>key<sp/>will<sp/>be<sp/>saved<sp/>locally<sp/>for<sp/>future<sp/>use.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Documentation<sp/>Generation</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Generate<sp/>documentation<sp/>for<sp/>Git<sp/>diff,<sp/>files<sp/>or<sp/>folders:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Generate<sp/>documentation<sp/>for<sp/>latest<sp/>Git<sp/>commit<sp/>diff</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Generate<sp/>documentation<sp/>for<sp/>specific<sp/>file<sp/>or<sp/>folder</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>/path/to/file/or/folder</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Options:</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>`-l,<sp/>--location`:<sp/>Path<sp/>to<sp/>specific<sp/>file<sp/>or<sp/>folder<sp/>for<sp/>documentation<sp/>generation<sp/>(defaults<sp/>to<sp/>current<sp/>directory)</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Git<sp/>Hook<sp/>Management</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Install<sp/>or<sp/>uninstall<sp/>Git<sp/>post-commit<sp/>hooks:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Install<sp/>Git<sp/>hook</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>install-hook<sp/>[-l<sp/>/path/to/repo]</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Uninstall<sp/>Git<sp/>hook</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>uninstall-hook<sp/>[-l<sp/>/path/to/repo]</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Options:</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>`-l,<sp/>--location`:<sp/>Path<sp/>to<sp/>the<sp/>Git<sp/>repository<sp/>(defaults<sp/>to<sp/>current<sp/>directory)</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Authentication</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Penify<sp/>CLI<sp/>uses<sp/>an<sp/>API<sp/>token<sp/>for<sp/>authentication<sp/>with<sp/>advanced<sp/>features.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">If<sp/>no<sp/>token<sp/>is<sp/>available<sp/>and<sp/>you<sp/>try<sp/>to<sp/>access<sp/>an<sp/>advanced<sp/>feature,<sp/>you&apos;ll<sp/>be<sp/>prompted<sp/>to<sp/>log<sp/>in.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Local<sp/>LLM<sp/>Configuration</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">For<sp/>commit<sp/>message<sp/>generation,<sp/>Penify<sp/>can<sp/>use<sp/>a<sp/>local<sp/>LLM.<sp/>Configure<sp/>it<sp/>using:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>config<sp/>llm<sp/>--model<sp/>MODEL_NAME<sp/>--api-base<sp/>API_URL<sp/>--api-key<sp/>API_KEY</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Common<sp/>configurations:</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>OpenAI:<sp/>`--model<sp/>gpt-3.5-turbo<sp/>--api-base<sp/>https://api.openai.com/v1<sp/>--api-key<sp/>YOUR_KEY`</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Anthropic:<sp/>`--model<sp/>claude-2<sp/>--api-base<sp/>https://api.anthropic.com<sp/>--api-key<sp/>YOUR_KEY`</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>JIRA<sp/>Integration</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Configure<sp/>JIRA<sp/>integration<sp/>to<sp/>enhance<sp/>commit<sp/>messages<sp/>with<sp/>issue<sp/>details:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>config<sp/>jira<sp/>--url<sp/>https://your-domain.atlassian.net<sp/>--username<sp/>your-email@example.com<sp/>--api-token<sp/>YOUR_API_TOKEN</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Development</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">To<sp/>set<sp/>up<sp/>the<sp/>development<sp/>environment:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">1.<sp/>Clone<sp/>the<sp/>repository:</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>```bash</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>git<sp/>clone<sp/>https://github.com/SingularityX-ai/penify-cli.git</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">2.<sp/>Install<sp/>the<sp/>package<sp/>in<sp/>editable<sp/>mode:</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>```bash</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>pip<sp/>install<sp/>-e<sp/>.</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Running<sp/>Tests</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">pytest</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>License</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">This<sp/>project<sp/>is<sp/>licensed<sp/>under<sp/>the<sp/>MIT<sp/>License.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Author</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Suman<sp/>Saurabh<sp/>(ss.sumansaurabh92@gmail.com)</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Contributing</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Contributions<sp/>are<sp/>welcome!<sp/>Please<sp/>feel<sp/>free<sp/>to<sp/>submit<sp/>a<sp/>Pull<sp/>Request.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Issues</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">If<sp/>you<sp/>encounter<sp/>any<sp/>problems<sp/>or<sp/>have<sp/>suggestions,<sp/>please<sp/>file<sp/>an<sp/>issue<sp/>on<sp/>the<sp/>[GitHub<sp/>repository](https://github.com/SingularityX-ai/penify/issues).</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Support</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">For<sp/>automated<sp/>API<sp/>Documentation,<sp/>Architecture<sp/>Documentation,<sp/>Code<sp/>Documentation,<sp/>Pull<sp/>Request<sp/>Documentation,<sp/>or<sp/>if<sp/>you<sp/>need<sp/>a<sp/>demo,<sp/>please<sp/>join<sp/>our<sp/>[Discord<sp/>support<sp/>channel](https://discord.gg/wqrc8JeV).</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/README.md"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/api__client_8py.xml b/docs345/xml/api__client_8py.xml
new file mode 100644
index 0000000..2cc88a0
--- /dev/null
+++ b/docs345/xml/api__client_8py.xml
@@ -0,0 +1,183 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="api__client_8py" kind="file" language="Python">
+    <compoundname>api_client.py</compoundname>
+    <innerclass refid="classpenify__hook_1_1api__client_1_1APIClient" prot="public">penify_hook::api_client::APIClient</innerclass>
+    <innernamespace refid="namespacepenify__hook">penify_hook</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1api__client">penify_hook::api_client</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacepenify__hook" refkind="compound"><highlight class="keyword">import</highlight><highlight class="normal"><sp/>json</highlight></codeline>
+<codeline lineno="2"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>os</highlight></codeline>
+<codeline lineno="3"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>requests</highlight></codeline>
+<codeline lineno="4"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>.llm_client<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>LLMClient</highlight></codeline>
+<codeline lineno="5"><highlight class="normal"></highlight></codeline>
+<codeline lineno="6" refid="classpenify__hook_1_1api__client_1_1APIClient" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1api__client_1_1APIClient" kindref="compound">APIClient</ref>:</highlight></codeline>
+<codeline lineno="7" refid="classpenify__hook_1_1api__client_1_1APIClient_1ad9cb741a8baf2d13f845e25a36311086" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1api__client_1_1APIClient_1ad9cb741a8baf2d13f845e25a36311086" kindref="member">__init__</ref>(self,<sp/>api_url,<sp/>api_token:<sp/>str<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">,<sp/>bearer_token:<sp/>str<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">):</highlight></codeline>
+<codeline lineno="8" refid="classpenify__hook_1_1api__client_1_1APIClient_1a130cf688ed35dc0e8cbd8320b6b2d872" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1api__client_1_1APIClient_1a130cf688ed35dc0e8cbd8320b6b2d872" kindref="member">api_url</ref><sp/>=<sp/>api_url</highlight></codeline>
+<codeline lineno="9" refid="classpenify__hook_1_1api__client_1_1APIClient_1a5bb502603717946ad710b49ad9d95237" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1api__client_1_1APIClient_1a5bb502603717946ad710b49ad9d95237" kindref="member">AUTH_TOKEN</ref><sp/>=<sp/>api_token</highlight></codeline>
+<codeline lineno="10" refid="classpenify__hook_1_1api__client_1_1APIClient_1a7d7e2cf42c54eb4f25adee96a09ee7b0" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1api__client_1_1APIClient_1a7d7e2cf42c54eb4f25adee96a09ee7b0" kindref="member">BEARER_TOKEN</ref><sp/>=<sp/>bearer_token</highlight></codeline>
+<codeline lineno="11"><highlight class="normal"></highlight></codeline>
+<codeline lineno="12" refid="classpenify__hook_1_1api__client_1_1APIClient_1ac5aad61508c2cafdf6e88e6c7d6c82b3" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1api__client_1_1APIClient_1ac5aad61508c2cafdf6e88e6c7d6c82b3" kindref="member">send_file_for_docstring_generation</ref>(self,<sp/>file_name,<sp/>content,<sp/>line_numbers,<sp/>repo_details<sp/>=<sp/>None):</highlight></codeline>
+<codeline lineno="13"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Send<sp/>file<sp/>content<sp/>and<sp/>modified<sp/>lines<sp/>to<sp/>the<sp/>API<sp/>and<sp/>return<sp/>modified</highlight></codeline>
+<codeline lineno="14"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>content.</highlight></codeline>
+<codeline lineno="15"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="16"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>constructs<sp/>a<sp/>payload<sp/>containing<sp/>the<sp/>file<sp/>path,<sp/>content,</highlight></codeline>
+<codeline lineno="17"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>modified<sp/>line<sp/>numbers,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>sends<sp/>it<sp/>to<sp/>a<sp/>specified<sp/>API<sp/>endpoint<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="18"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>processing.<sp/>It<sp/>handles<sp/>the<sp/>response<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>the<sp/>API,<sp/>returning<sp/>the<sp/>modified</highlight></codeline>
+<codeline lineno="19"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>content<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>the<sp/>request<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>successful.<sp/>If<sp/>the<sp/>request<sp/>fails,<sp/>it<sp/>logs<sp/>the</highlight></codeline>
+<codeline lineno="20"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>error<sp/>details<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>returns<sp/>the<sp/>original<sp/>content.</highlight></codeline>
+<codeline lineno="21"><highlight class="normal"></highlight></codeline>
+<codeline lineno="22"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="23"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>file_name<sp/>(str):<sp/>The<sp/>path<sp/>to<sp/>the<sp/>file<sp/>being<sp/>sent.</highlight></codeline>
+<codeline lineno="24"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>content<sp/>(str):<sp/>The<sp/>content<sp/>of<sp/>the<sp/>file<sp/>to<sp/>be<sp/>processed.</highlight></codeline>
+<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>line_numbers<sp/>(list):<sp/>A<sp/>list<sp/>of<sp/>line<sp/>numbers<sp/>that<sp/>have<sp/>been<sp/>modified.</highlight></codeline>
+<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>repo_details<sp/>(str?):<sp/>Additional<sp/>repository<sp/>details<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>applicable.<sp/>Defaults<sp/>to<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">.</highlight></codeline>
+<codeline lineno="27"><highlight class="normal"></highlight></codeline>
+<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>str:<sp/>The<sp/>modified<sp/>content<sp/>returned<sp/>by<sp/>the<sp/>API,<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/>the<sp/>original<sp/>content<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>the</highlight></codeline>
+<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>request<sp/>fails.</highlight></codeline>
+<codeline lineno="31"><highlight class="normal"></highlight></codeline>
+<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Raises:</highlight></codeline>
+<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Exception:<sp/>If<sp/>there<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>an<sp/>error<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>processing<sp/>the<sp/>file<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>no<sp/>specific<sp/>error</highlight></codeline>
+<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>message<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>provided.</highlight></codeline>
+<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="36"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>payload<sp/>=<sp/>{</highlight></codeline>
+<codeline lineno="37"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&apos;file_path&apos;</highlight><highlight class="normal">:<sp/>file_name,</highlight></codeline>
+<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;content&apos;</highlight><highlight class="normal">:<sp/>content,</highlight></codeline>
+<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;modified_lines&apos;</highlight><highlight class="normal">:<sp/>line_numbers</highlight></codeline>
+<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>repo_details:</highlight></codeline>
+<codeline lineno="42"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>payload[</highlight><highlight class="stringliteral">&apos;git_repo&apos;</highlight><highlight class="normal">]<sp/>=<sp/>repo_details</highlight></codeline>
+<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>url<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1api__client_1_1APIClient_1a130cf688ed35dc0e8cbd8320b6b2d872" kindref="member">api_url</ref>+</highlight><highlight class="stringliteral">&quot;/v1/cli/file/generate/doc&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>response<sp/>=<sp/>requests.post(url,<sp/>json=payload,headers={</highlight><highlight class="stringliteral">&quot;api-key&quot;</highlight><highlight class="normal">:<sp/>f</highlight><highlight class="stringliteral">&quot;{self.AUTH_TOKEN}&quot;</highlight><highlight class="normal">},<sp/>timeout=60*10)</highlight></codeline>
+<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>response.status_code<sp/>==<sp/>200:</highlight></codeline>
+<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>response<sp/>=<sp/>response.json()</highlight></codeline>
+<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>response.get(</highlight><highlight class="stringliteral">&apos;modified_content&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>error_message<sp/>=<sp/>response.json().get(</highlight><highlight class="stringliteral">&apos;detail&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>error_message:</highlight></codeline>
+<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>error_message<sp/>=<sp/>response.text</highlight></codeline>
+<codeline lineno="52"><highlight class="normal"></highlight></codeline>
+<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">raise</highlight><highlight class="normal"><sp/><ref refid="classException" kindref="compound">Exception</ref>(f</highlight><highlight class="stringliteral">&quot;API<sp/>Error:<sp/>{error_message}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="55" refid="classpenify__hook_1_1api__client_1_1APIClient_1a7ff74798e7d428b4e2f20095287eb2ce" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1api__client_1_1APIClient_1a7ff74798e7d428b4e2f20095287eb2ce" kindref="member">generate_commit_summary</ref>(self,<sp/>git_diff,<sp/>instruction:<sp/>str<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;&quot;</highlight><highlight class="normal">,<sp/>repo_details<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">,<sp/>jira_context:<sp/>dict<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">):</highlight></codeline>
+<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Generate<sp/>a<sp/>commit<sp/>summary<sp/>by<sp/>sending<sp/>a<sp/>POST<sp/>request<sp/>to<sp/>the<sp/>API<sp/>endpoint.</highlight></codeline>
+<codeline lineno="57"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="58"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>constructs<sp/>a<sp/>payload<sp/>containing<sp/>the<sp/>git<sp/>diff<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>any</highlight></codeline>
+<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>additional<sp/>instructions<sp/>provided.<sp/>It<sp/>then<sp/>sends<sp/>this<sp/>payload<sp/>to<sp/>a</highlight></codeline>
+<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>specified<sp/>API<sp/>endpoint<sp/>to<sp/>generate<sp/>a<sp/>summary<sp/>of<sp/>the<sp/>commit.<sp/>If<sp/>the</highlight></codeline>
+<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>request<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>successful,<sp/>it<sp/>returns<sp/>the<sp/>response<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>the<sp/>API;<sp/>otherwise,</highlight></codeline>
+<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>it<sp/>returns<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">.</highlight></codeline>
+<codeline lineno="63"><highlight class="normal"></highlight></codeline>
+<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>git_diff<sp/>(str):<sp/>The<sp/>git<sp/>diff<sp/>of<sp/>the<sp/>commit.</highlight></codeline>
+<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>instruction<sp/>(str??):<sp/>Additional<sp/>instruction<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>commit.<sp/>Defaults<sp/>to<sp/></highlight><highlight class="stringliteral">&quot;&quot;</highlight><highlight class="normal">.</highlight></codeline>
+<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>repo_details<sp/>(dict??):<sp/>Details<sp/>of<sp/>the<sp/>git<sp/>repository.<sp/>Defaults<sp/>to<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">.</highlight></codeline>
+<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_context<sp/>(dict??):<sp/>JIRA<sp/>issue<sp/>details<sp/>to<sp/>enhance<sp/>the<sp/>commit<sp/>summary.<sp/>Defaults<sp/>to<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">.</highlight></codeline>
+<codeline lineno="69"><highlight class="normal"></highlight></codeline>
+<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>dict:<sp/>The<sp/>response<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>the<sp/>API<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>the<sp/>request<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>successful,<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"><sp/>otherwise.</highlight></codeline>
+<codeline lineno="72"><highlight class="normal"></highlight></codeline>
+<codeline lineno="73"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Raises:</highlight></codeline>
+<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Exception:<sp/>If<sp/>there<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>an<sp/>error<sp/>during<sp/>the<sp/>API<sp/>request.</highlight></codeline>
+<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="76"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>payload<sp/>=<sp/>{</highlight></codeline>
+<codeline lineno="77"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&apos;git_diff&apos;</highlight><highlight class="normal">:<sp/>git_diff,</highlight></codeline>
+<codeline lineno="78"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;additional_instruction&apos;</highlight><highlight class="normal">:<sp/>instruction</highlight></codeline>
+<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>repo_details:</highlight></codeline>
+<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>payload[</highlight><highlight class="stringliteral">&apos;git_repo&apos;</highlight><highlight class="normal">]<sp/>=<sp/>repo_details</highlight></codeline>
+<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Add<sp/>JIRA<sp/>context<sp/>if<sp/>available</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>jira_context:</highlight></codeline>
+<codeline lineno="85"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>payload[</highlight><highlight class="stringliteral">&apos;jira_context&apos;</highlight><highlight class="normal">]<sp/>=<sp/>jira_context</highlight></codeline>
+<codeline lineno="86"><highlight class="normal"></highlight></codeline>
+<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>url<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1api__client_1_1APIClient_1a130cf688ed35dc0e8cbd8320b6b2d872" kindref="member">api_url</ref>+</highlight><highlight class="stringliteral">&quot;/v1/cli/commit/summary&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>response<sp/>=<sp/>requests.post(url,<sp/>json=payload,<sp/>headers</highlight></codeline>
+<codeline lineno="90"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>={</highlight><highlight class="stringliteral">&quot;api-key&quot;</highlight><highlight class="normal">:<sp/>f</highlight><highlight class="stringliteral">&quot;{self.AUTH_TOKEN}&quot;</highlight><highlight class="normal">},<sp/>timeout=60*10)</highlight></codeline>
+<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>response.status_code<sp/>==<sp/>200:</highlight></codeline>
+<codeline lineno="92"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>response<sp/>=<sp/>response.json()</highlight></codeline>
+<codeline lineno="93"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>response</highlight></codeline>
+<codeline lineno="94"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="95"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>print(f&quot;Response:<sp/>{response.status_code}&quot;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="96"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>print(f&quot;Error:<sp/>{response.text}&quot;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="97"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">raise</highlight><highlight class="normal"><sp/><ref refid="classException" kindref="compound">Exception</ref>(f</highlight><highlight class="stringliteral">&quot;API<sp/>Error:<sp/>{response.text}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="98"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="99"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Error:<sp/>{e}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="100"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="101"><highlight class="normal"></highlight></codeline>
+<codeline lineno="102" refid="classpenify__hook_1_1api__client_1_1APIClient_1a5d2b4a26b24352d951ea79ecc4ff3402" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1api__client_1_1APIClient_1a5d2b4a26b24352d951ea79ecc4ff3402" kindref="member">get_supported_file_types</ref>(self)<sp/>-&gt;<sp/>list[str]:</highlight></codeline>
+<codeline lineno="103"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Retrieve<sp/>the<sp/>supported<sp/>file<sp/>types<sp/>from<sp/>the<sp/>API.</highlight></codeline>
+<codeline lineno="104"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="105"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>sends<sp/>a<sp/>request<sp/>to<sp/>the<sp/>API<sp/>endpoint</highlight></codeline>
+<codeline lineno="106"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>`/v1/file/supported_languages`<sp/>to<sp/>obtain<sp/>a<sp/>list<sp/>of<sp/>supported<sp/>file<sp/>types.</highlight></codeline>
+<codeline lineno="107"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>If<sp/>the<sp/>API<sp/>call<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>successful<sp/>(status<sp/>code<sp/>200),<sp/>it<sp/>parses<sp/>the<sp/>JSON</highlight></codeline>
+<codeline lineno="108"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>response<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>returns<sp/>the<sp/>list<sp/>of<sp/>supported<sp/>file<sp/>types.<sp/>If<sp/>the<sp/>API<sp/>call</highlight></codeline>
+<codeline lineno="109"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>fails,<sp/>it<sp/>returns<sp/>a<sp/>default<sp/>list<sp/>of<sp/>common<sp/>file<sp/>types.</highlight></codeline>
+<codeline lineno="110"><highlight class="normal"></highlight></codeline>
+<codeline lineno="111"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="112"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>list[str]:<sp/>A<sp/>list<sp/>of<sp/>supported<sp/>file<sp/>types,<sp/>either<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>the<sp/>API<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/>a<sp/>default<sp/>set.</highlight></codeline>
+<codeline lineno="113"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="114"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="115"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>url<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1api__client_1_1APIClient_1a130cf688ed35dc0e8cbd8320b6b2d872" kindref="member">api_url</ref>+&quot;/v1/cli/supported_languages&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="116"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>response<sp/>=<sp/>requests.get(url)</highlight></codeline>
+<codeline lineno="117"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>response.status_code<sp/>==<sp/>200:</highlight></codeline>
+<codeline lineno="118"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>response<sp/>=<sp/>response.json()</highlight></codeline>
+<codeline lineno="119"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>response</highlight></codeline>
+<codeline lineno="120"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="121"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>[</highlight><highlight class="stringliteral">&quot;py&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;js&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;ts&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;java&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;kt&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;cs&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;c&quot;</highlight><highlight class="normal">]</highlight></codeline>
+<codeline lineno="122"><highlight class="normal"></highlight></codeline>
+<codeline lineno="123" refid="classpenify__hook_1_1api__client_1_1APIClient_1ac0ada470b897935f9fb372cd0e7e51e3" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1api__client_1_1APIClient_1ac0ada470b897935f9fb372cd0e7e51e3" kindref="member">generate_commit_summary_with_llm</ref>(self,<sp/>diff,<sp/>message,<sp/>generate_description:<sp/>bool,<sp/>repo_details,<sp/>llm_client<sp/>:<sp/>LLMClient,<sp/>jira_context=</highlight><highlight class="keywordtype">None</highlight><highlight class="normal">):</highlight></codeline>
+<codeline lineno="124"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Generates<sp/>a<sp/>commit<sp/>summary<sp/>using<sp/>a<sp/>local<sp/>LLM<sp/>client.<sp/>If<sp/>an<sp/>error<sp/>occurs</highlight></codeline>
+<codeline lineno="125"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>during<sp/>the<sp/>generation<sp/>process,</highlight></codeline>
+<codeline lineno="126"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>it<sp/>falls<sp/>back<sp/>to<sp/>using<sp/>the<sp/>API.</highlight></codeline>
+<codeline lineno="127"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="128"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="129"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>diff<sp/>(str):<sp/>The<sp/>Git<sp/>diff<sp/>of<sp/>changes.</highlight></codeline>
+<codeline lineno="130"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>message<sp/>(str):<sp/>User-provided<sp/>commit<sp/>message<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/>instructions.</highlight></codeline>
+<codeline lineno="131"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>generate_description<sp/>(bool):<sp/>Flag<sp/>indicating<sp/>whether<sp/>to<sp/>generate<sp/>a<sp/>description<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>commit.</highlight></codeline>
+<codeline lineno="132"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>repo_details<sp/>(dict):<sp/>Details<sp/>about<sp/>the<sp/>repository.</highlight></codeline>
+<codeline lineno="133"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>llm_client<sp/>(LLMClient):<sp/>An<sp/>instance<sp/>of<sp/>LLMClient<sp/>used<sp/>to<sp/>generate<sp/>the<sp/>summary.</highlight></codeline>
+<codeline lineno="134"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_context<sp/>(JIRAContext?):<sp/>Optional<sp/>JIRA<sp/>issue<sp/>context<sp/>to<sp/>enhance<sp/>the<sp/>summary.</highlight></codeline>
+<codeline lineno="135"><highlight class="normal"></highlight></codeline>
+<codeline lineno="136"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="137"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>dict:<sp/>A<sp/>dictionary<sp/>containing<sp/>the<sp/>title<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>description<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>commit.</highlight></codeline>
+<codeline lineno="138"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="139"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="140"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>llm_client.generate_commit_summary(diff,<sp/>message,<sp/>generate_description,<sp/>repo_details,<sp/>jira_context)</highlight></codeline>
+<codeline lineno="141"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="142"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Error<sp/>using<sp/>local<sp/>LLM:<sp/>{e}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="143"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Fall<sp/>back<sp/>to<sp/>API<sp/>for<sp/>commit<sp/>summary</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="144"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>self.<ref refid="classpenify__hook_1_1api__client_1_1APIClient_1a7ff74798e7d428b4e2f20095287eb2ce" kindref="member">generate_commit_summary</ref>(diff,<sp/>message,<sp/>repo_details,<sp/>jira_context)</highlight></codeline>
+<codeline lineno="145"><highlight class="normal"></highlight></codeline>
+<codeline lineno="146" refid="classpenify__hook_1_1api__client_1_1APIClient_1ad15b790608e703c8c122aa2ead7dfa99" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1api__client_1_1APIClient_1ad15b790608e703c8c122aa2ead7dfa99" kindref="member">get_api_key</ref>(self):</highlight></codeline>
+<codeline lineno="147"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Fetch<sp/>an<sp/>API<sp/>key<sp/>from<sp/>a<sp/>specified<sp/>URL.</highlight></codeline>
+<codeline lineno="148"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="149"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>sends<sp/>a<sp/>GET<sp/>request<sp/>to<sp/>retrieve<sp/>an<sp/>API<sp/>token<sp/>using<sp/>a</highlight></codeline>
+<codeline lineno="150"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Bearer<sp/>token<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the<sp/>headers.<sp/>It<sp/>handles<sp/>the<sp/>response<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>returns<sp/>the<sp/>API</highlight></codeline>
+<codeline lineno="151"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>key<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>the<sp/>request<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>successful,<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/>`</highlight><highlight class="keywordtype">None</highlight><highlight class="normal">`<sp/>otherwise.</highlight></codeline>
+<codeline lineno="152"><highlight class="normal"></highlight></codeline>
+<codeline lineno="153"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="154"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>str:<sp/>The<sp/>API<sp/>key<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>the<sp/>request<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>successful,<sp/>`</highlight><highlight class="keywordtype">None</highlight><highlight class="normal">`<sp/>otherwise.</highlight></codeline>
+<codeline lineno="155"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="156"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="157"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="158"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>url<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1api__client_1_1APIClient_1a130cf688ed35dc0e8cbd8320b6b2d872" kindref="member">api_url</ref>+&quot;/v1/apiToken/get&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="159"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>response<sp/>=<sp/>requests.get(url,<sp/>headers={</highlight><highlight class="stringliteral">&quot;Authorization&quot;</highlight><highlight class="normal">:<sp/>f</highlight><highlight class="stringliteral">&quot;Bearer<sp/>{self.BEARER_TOKEN}&quot;</highlight><highlight class="normal">},<sp/>timeout=60*10)</highlight></codeline>
+<codeline lineno="160"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>response.status_code<sp/>==<sp/>200:</highlight></codeline>
+<codeline lineno="161"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>response<sp/>=<sp/>response.json()</highlight></codeline>
+<codeline lineno="162"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>response.get(</highlight><highlight class="stringliteral">&apos;key&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="163"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="164"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Response:<sp/>{response.status_code}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="165"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Error:<sp/>{response.text}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="166"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="167"><highlight class="normal"></highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/auth__commands_8py.xml b/docs345/xml/auth__commands_8py.xml
new file mode 100644
index 0000000..307767a
--- /dev/null
+++ b/docs345/xml/auth__commands_8py.xml
@@ -0,0 +1,196 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="auth__commands_8py" kind="file" language="Python">
+    <compoundname>auth_commands.py</compoundname>
+    <innernamespace refid="namespacepenify__hook">penify_hook</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1commands">penify_hook::commands</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1commands_1_1auth__commands">penify_hook::commands::auth_commands</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacepenify__hook_1_1commands_1_1auth__commands" refkind="compound"><highlight class="keyword">import</highlight><highlight class="normal"><sp/>json</highlight></codeline>
+<codeline lineno="2"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>webbrowser</highlight></codeline>
+<codeline lineno="3"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>http.server</highlight></codeline>
+<codeline lineno="4"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>socketserver</highlight></codeline>
+<codeline lineno="5"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>urllib.parse</highlight></codeline>
+<codeline lineno="6"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>random</highlight></codeline>
+<codeline lineno="7"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>os</highlight></codeline>
+<codeline lineno="8"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>threading<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>Thread</highlight></codeline>
+<codeline lineno="9"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>pathlib<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>Path</highlight></codeline>
+<codeline lineno="10"><highlight class="normal"></highlight></codeline>
+<codeline lineno="11" refid="namespacepenify__hook_1_1commands_1_1auth__commands_1aa3956ca1749d4218ea1dc6e5b6218b24" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1commands_1_1auth__commands_1aa3956ca1749d4218ea1dc6e5b6218b24" kindref="member">save_credentials</ref>(api_key):</highlight></codeline>
+<codeline lineno="12"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="13"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>Save<sp/>the<sp/>token<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>API<sp/>keys<sp/>based<sp/>on<sp/>priority:</highlight></codeline>
+<codeline lineno="14"><highlight class="normal"><sp/><sp/><sp/><sp/>1.<sp/>.env<sp/>file<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>Git<sp/>repo<sp/>root<sp/>(</highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>a<sp/>git<sp/>repo)</highlight></codeline>
+<codeline lineno="15"><highlight class="normal"><sp/><sp/><sp/><sp/>2.<sp/>.penify<sp/>file<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>home<sp/>directory<sp/>(</highlight><highlight class="keyword">global</highlight><highlight class="normal"><sp/>fallback)</highlight></codeline>
+<codeline lineno="16"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="17"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="18"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_key:<sp/>The<sp/>API<sp/>key<sp/>to<sp/>save</highlight></codeline>
+<codeline lineno="19"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="20"><highlight class="normal"><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="21"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>bool:<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>saved<sp/>successfully,<sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"><sp/>otherwise</highlight></codeline>
+<codeline lineno="22"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="23"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Try<sp/>to<sp/>save<sp/>in<sp/>.env<sp/>file<sp/>in<sp/>git<sp/>repo<sp/>first</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="24"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>..utils<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>recursive_search_git_folder</highlight></codeline>
+<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>current_dir<sp/>=<sp/>os.getcwd()</highlight></codeline>
+<codeline lineno="27"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>repo_root<sp/>=<sp/><ref refid="namespacepenify__hook_1_1utils_1a95c3f9c80860d6a2e2d061d2fb660a3f" kindref="member">recursive_search_git_folder</ref>(current_dir)</highlight></codeline>
+<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>repo_root:</highlight></codeline>
+<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>We&apos;re<sp/>in<sp/>a<sp/>git<sp/>repo,<sp/>save<sp/>to<sp/>.env<sp/>file</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="31"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>env_file<sp/>=<sp/>Path(repo_root)<sp/>/<sp/></highlight><highlight class="stringliteral">&apos;.env&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Read<sp/>existing<sp/>.env<sp/>content</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>env_content<sp/>=<sp/>{}</highlight></codeline>
+<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>env_file.exists():</highlight></codeline>
+<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>open(env_file,<sp/></highlight><highlight class="stringliteral">&apos;r&apos;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>f:</highlight></codeline>
+<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>line<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>f:</highlight></codeline>
+<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>line<sp/>=<sp/>line.strip()</highlight></codeline>
+<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>line<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>line.startswith(</highlight><highlight class="stringliteral">&apos;#&apos;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;=&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>line:</highlight></codeline>
+<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>key,<sp/>value<sp/>=<sp/>line.split(</highlight><highlight class="stringliteral">&apos;=&apos;</highlight><highlight class="normal">,<sp/>1)</highlight></codeline>
+<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>env_content[key.strip()]<sp/>=<sp/>value.strip()</highlight></codeline>
+<codeline lineno="42"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Update<sp/>API<sp/>token</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>env_content[</highlight><highlight class="stringliteral">&apos;PENIFY_API_TOKEN&apos;</highlight><highlight class="normal">]<sp/>=<sp/>api_key</highlight></codeline>
+<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Write<sp/>back<sp/>to<sp/>.env<sp/>file</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>open(env_file,<sp/></highlight><highlight class="stringliteral">&apos;w&apos;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>f:</highlight></codeline>
+<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>key,<sp/>value<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>env_content.items():</highlight></codeline>
+<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>f.write(f</highlight><highlight class="stringliteral">&quot;{key}={value}\n&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;API<sp/>token<sp/>saved<sp/>to<sp/>{env_file}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Error<sp/>saving<sp/>to<sp/>.env<sp/>file:<sp/>{str(e)}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Fall<sp/>back<sp/>to<sp/>saving<sp/>in<sp/>.penify<sp/>global<sp/>config</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Error<sp/>finding<sp/>git<sp/>repository:<sp/>{str(e)}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Fall<sp/>back<sp/>to<sp/>global<sp/>.penify<sp/>file<sp/>in<sp/>home<sp/>directory</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/>home_dir<sp/>=<sp/>Path.home()</highlight></codeline>
+<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/>penify_file<sp/>=<sp/>home_dir<sp/>/<sp/></highlight><highlight class="stringliteral">&apos;.penify&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>If<sp/>the<sp/>file<sp/>already<sp/>exists,<sp/>add<sp/>the<sp/>new<sp/>api<sp/>key<sp/>to<sp/>the<sp/>existing<sp/>file</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>penify_file.exists():</highlight></codeline>
+<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>open(penify_file,<sp/></highlight><highlight class="stringliteral">&apos;r&apos;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>f:</highlight></codeline>
+<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>credentials<sp/>=<sp/>json.load(f)</highlight></codeline>
+<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>credentials[</highlight><highlight class="stringliteral">&apos;api_keys&apos;</highlight><highlight class="normal">]<sp/>=<sp/>api_key</highlight></codeline>
+<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>credentials<sp/>=<sp/>{</highlight></codeline>
+<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;api_keys&apos;</highlight><highlight class="normal">:<sp/>api_key</highlight></codeline>
+<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="72"><highlight class="normal"></highlight></codeline>
+<codeline lineno="73"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>open(penify_file,<sp/></highlight><highlight class="stringliteral">&apos;w&apos;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>f:</highlight></codeline>
+<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>json.dump(credentials,<sp/>f)</highlight></codeline>
+<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;API<sp/>token<sp/>saved<sp/>to<sp/>global<sp/>config<sp/>{penify_file}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="78"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Error<sp/>saving<sp/>credentials:<sp/>{str(e)}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="81"><highlight class="normal"></highlight></codeline>
+<codeline lineno="82" refid="namespacepenify__hook_1_1commands_1_1auth__commands_1a78f375c58bb6f69f98675e6a9ac84655" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1commands_1_1auth__commands_1a78f375c58bb6f69f98675e6a9ac84655" kindref="member">login</ref>(api_url,<sp/>dashboard_url):</highlight></codeline>
+<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Open<sp/>the<sp/>login<sp/>page<sp/>in<sp/>a<sp/>web<sp/>browser<sp/>and<sp/>listen<sp/>for<sp/>the<sp/>redirect<sp/>URL<sp/>to</highlight></codeline>
+<codeline lineno="84"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>capture<sp/>the<sp/>token.</highlight></codeline>
+<codeline lineno="85"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="86"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>generates<sp/>a<sp/>random<sp/>redirect<sp/>port,<sp/>constructs<sp/>the<sp/>full</highlight></codeline>
+<codeline lineno="87"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>login<sp/>URL<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>the<sp/>provided<sp/>dashboard<sp/>URL,<sp/>opens<sp/>the<sp/>login<sp/>page<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the</highlight></codeline>
+<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/>default<sp/>web<sp/>browser,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>sets<sp/>up<sp/>a<sp/>simple<sp/>HTTP<sp/>server<sp/>to<sp/>listen<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the</highlight></codeline>
+<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/>redirect.<sp/>Upon<sp/>receiving<sp/>the<sp/>redirect,<sp/>it<sp/>extracts<sp/>the<sp/>token<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>the</highlight></codeline>
+<codeline lineno="90"><highlight class="normal"><sp/><sp/><sp/><sp/>query<sp/>parameters,<sp/>fetches<sp/>API<sp/>keys<sp/>using<sp/>the<sp/>token,<sp/>saves<sp/>them<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/>successful,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>handles<sp/>login<sp/>failures<sp/>by<sp/>notifying<sp/>the<sp/>user.</highlight></codeline>
+<codeline lineno="92"><highlight class="normal"></highlight></codeline>
+<codeline lineno="93"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="94"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_url<sp/>(str):<sp/>The<sp/>URL<sp/>of<sp/>the<sp/>API<sp/>service<sp/>to<sp/>fetch<sp/>API<sp/>keys.</highlight></codeline>
+<codeline lineno="95"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>dashboard_url<sp/>(str):<sp/>The<sp/>URL<sp/>of<sp/>the<sp/>dashboard<sp/>where<sp/>the<sp/>user<sp/>will<sp/>be<sp/>redirected<sp/>after<sp/>logging</highlight></codeline>
+<codeline lineno="96"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal">.</highlight></codeline>
+<codeline lineno="97"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="98"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>redirect_port<sp/>=<sp/>random.randint(30000,<sp/>50000)</highlight></codeline>
+<codeline lineno="99"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>redirect_url<sp/>=<sp/>f&quot;http://localhost:{redirect_port}/callback&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="100"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="101"><highlight class="normal"><sp/><sp/><sp/><sp/>full_login_url<sp/>=<sp/>f</highlight><highlight class="stringliteral">&quot;{dashboard_url}?redirectUri={urllib.parse.quote(redirect_url)}&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="102"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="103"><highlight class="normal"><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Opening<sp/>login<sp/>page<sp/>in<sp/>your<sp/>default<sp/>web<sp/>browser:<sp/>{full_login_url}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="104"><highlight class="normal"><sp/><sp/><sp/><sp/>webbrowser.open(full_login_url)</highlight></codeline>
+<codeline lineno="105"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="106"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal">TokenHandler(http.server.SimpleHTTPRequestHandler):</highlight></codeline>
+<codeline lineno="107"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal">do_GET(self):</highlight></codeline>
+<codeline lineno="108"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Handle<sp/>a<sp/>GET<sp/>request<sp/>to<sp/>process<sp/>login<sp/>token<sp/>and<sp/>redirect<sp/>or<sp/>display</highlight></codeline>
+<codeline lineno="109"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>error<sp/>message.</highlight></codeline>
+<codeline lineno="110"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="111"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>method<sp/>processes<sp/>the<sp/>incoming<sp/>GET<sp/>request,<sp/>extracts<sp/>the<sp/>token<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="112"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>the<sp/>query<sp/>string,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>performs<sp/>actions<sp/>based<sp/>on<sp/>whether<sp/>the<sp/>token<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="113"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>present.<sp/>If<sp/>the<sp/>token<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>valid,<sp/>it<sp/>redirects<sp/>the<sp/>user<sp/>to<sp/>the<sp/>Penify</highlight></codeline>
+<codeline lineno="114"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>dashboard<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>fetches<sp/>API<sp/>keys<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>successful.<sp/>If<sp/>the<sp/>token<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>invalid,</highlight></codeline>
+<codeline lineno="115"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>it<sp/>displays<sp/>an<sp/>error<sp/>message.</highlight></codeline>
+<codeline lineno="116"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="117"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="118"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>query<sp/>=<sp/>urllib.parse.urlparse(self.path).query</highlight></codeline>
+<codeline lineno="119"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>query_components<sp/>=<sp/>urllib.parse.parse_qs(query)</highlight></codeline>
+<codeline lineno="120"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>token<sp/>=<sp/>query_components.get(&quot;token&quot;</highlight><highlight class="normal">,<sp/>[</highlight><highlight class="keywordtype">None</highlight><highlight class="normal">])[0]</highlight></codeline>
+<codeline lineno="121"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="122"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>token:</highlight></codeline>
+<codeline lineno="123"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_response(200)</highlight></codeline>
+<codeline lineno="124"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_header(</highlight><highlight class="stringliteral">&quot;Content-type&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;text/html&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="125"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.end_headers()</highlight></codeline>
+<codeline lineno="126"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>response<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="127"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;html&gt;</highlight></codeline>
+<codeline lineno="128"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;head&gt;</highlight></codeline>
+<codeline lineno="129"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;script&gt;</highlight></codeline>
+<codeline lineno="130"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>setTimeout(function()<sp/>{</highlight></codeline>
+<codeline lineno="131"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>window.location.href<sp/>=<sp/>&apos;https://dashboard.penify.dev&apos;</highlight><highlight class="normal">;</highlight></codeline>
+<codeline lineno="132"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>},<sp/>5000);</highlight></codeline>
+<codeline lineno="133"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;/script&gt;</highlight></codeline>
+<codeline lineno="134"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;/head&gt;</highlight></codeline>
+<codeline lineno="135"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;body&gt;</highlight></codeline>
+<codeline lineno="136"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;h1&gt;Login<sp/>Successful!&lt;/h1&gt;</highlight></codeline>
+<codeline lineno="137"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;p&gt;You<sp/>will<sp/>be<sp/>redirected<sp/>to<sp/>the<sp/>Penify<sp/>dashboard<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>5<sp/>seconds.<sp/>You<sp/>can<sp/>also<sp/>close<sp/>this<sp/>window<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>to<sp/>the<sp/>CLI.&lt;/p&gt;</highlight></codeline>
+<codeline lineno="138"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;/body&gt;</highlight></codeline>
+<codeline lineno="139"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;/html&gt;</highlight></codeline>
+<codeline lineno="140"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="141"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.wfile.write(response.encode())</highlight></codeline>
+<codeline lineno="142"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="143"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f&quot;\nLogin<sp/>successful!<sp/>Fetching<sp/>API<sp/>keys...&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="144"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>..api_client<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>APIClient</highlight></codeline>
+<codeline lineno="145"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_key<sp/>=<sp/>APIClient(api_url,<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">,<sp/>token).get_api_key()</highlight></codeline>
+<codeline lineno="146"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>api_key:</highlight></codeline>
+<codeline lineno="147"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1auth__commands_1aa3956ca1749d4218ea1dc6e5b6218b24" kindref="member">save_credentials</ref>(api_key)</highlight></codeline>
+<codeline lineno="148"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(</highlight><highlight class="stringliteral">&quot;API<sp/>keys<sp/>fetched<sp/>and<sp/>saved<sp/>successfully.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="149"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(</highlight><highlight class="stringliteral">&quot;You&apos;ll<sp/>be<sp/>redirected<sp/>to<sp/>the<sp/>Penify<sp/>dashboard.<sp/>You<sp/>can<sp/>continue<sp/>using<sp/>the<sp/>CLI.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="150"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="151"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(</highlight><highlight class="stringliteral">&quot;Failed<sp/>to<sp/>fetch<sp/>API<sp/>keys.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="152"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="153"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_response(400)</highlight></codeline>
+<codeline lineno="154"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_header(</highlight><highlight class="stringliteral">&quot;Content-type&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;text/html&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="155"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.end_headers()</highlight></codeline>
+<codeline lineno="156"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>response<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="157"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;html&gt;</highlight></codeline>
+<codeline lineno="158"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;body&gt;</highlight></codeline>
+<codeline lineno="159"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;h1&gt;Login<sp/>Failed&lt;/h1&gt;</highlight></codeline>
+<codeline lineno="160"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;p&gt;Please<sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal"><sp/>again.&lt;/p&gt;</highlight></codeline>
+<codeline lineno="161"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;/body&gt;</highlight></codeline>
+<codeline lineno="162"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;/html&gt;</highlight></codeline>
+<codeline lineno="163"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="164"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.wfile.write(response.encode())</highlight></codeline>
+<codeline lineno="165"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(&quot;\nLogin<sp/>failed.<sp/>Please<sp/>try<sp/>again.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="166"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="167"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Schedule<sp/>the<sp/>server<sp/>shutdown</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="168"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>thread<sp/>=<sp/>Thread(target=self.server.shutdown)</highlight></codeline>
+<codeline lineno="169"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>thread.daemon<sp/>=<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="170"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>thread.start()</highlight></codeline>
+<codeline lineno="171"><highlight class="normal"></highlight></codeline>
+<codeline lineno="172"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal">log_message(self,<sp/>format,<sp/>*args):</highlight></codeline>
+<codeline lineno="173"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Suppress<sp/>log<sp/>messages</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="174"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="175"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="176"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>socketserver.TCPServer((</highlight><highlight class="stringliteral">&quot;&quot;</highlight><highlight class="normal">,<sp/>redirect_port),<sp/>TokenHandler)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>httpd:</highlight></codeline>
+<codeline lineno="177"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Listening<sp/>on<sp/>port<sp/>{redirect_port}<sp/>for<sp/>the<sp/>redirect...&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="178"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>httpd.serve_forever()</highlight></codeline>
+<codeline lineno="179"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="180"><highlight class="normal"><sp/><sp/><sp/><sp/>print(</highlight><highlight class="stringliteral">&quot;Login<sp/>process<sp/>completed.<sp/>You<sp/>can<sp/>now<sp/>use<sp/>other<sp/>commands<sp/>with<sp/>your<sp/>API<sp/>token.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/auth_commands.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/base__analyzer_8py.xml b/docs345/xml/base__analyzer_8py.xml
new file mode 100644
index 0000000..3071dfd
--- /dev/null
+++ b/docs345/xml/base__analyzer_8py.xml
@@ -0,0 +1,36 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="base__analyzer_8py" kind="file" language="Python">
+    <compoundname>base_analyzer.py</compoundname>
+    <innerclass refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer" prot="public">penify_hook::base_analyzer::BaseAnalyzer</innerclass>
+    <innernamespace refid="namespacepenify__hook">penify_hook</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1base__analyzer">penify_hook::base_analyzer</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacepenify__hook_1_1base__analyzer" refkind="compound"><highlight class="keyword">import</highlight><highlight class="normal"><sp/>os</highlight></codeline>
+<codeline lineno="2"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>git<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>Repo</highlight></codeline>
+<codeline lineno="3"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>.api_client<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>APIClient</highlight></codeline>
+<codeline lineno="4"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1utils" kindref="compound">penify_hook.utils</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>get_repo_details,<sp/>recursive_search_git_folder</highlight></codeline>
+<codeline lineno="5"><highlight class="normal"></highlight></codeline>
+<codeline lineno="6"><highlight class="normal"></highlight></codeline>
+<codeline lineno="7" refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer" kindref="compound">BaseAnalyzer</ref>:</highlight></codeline>
+<codeline lineno="8"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="9" refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1ab1296a3d1e9070d891801876b66f7344" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1ab1296a3d1e9070d891801876b66f7344" kindref="member">__init__</ref>(self,<sp/>folder_path:<sp/>str,<sp/>api_client:<sp/>APIClient):</highlight></codeline>
+<codeline lineno="10" refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1aa67c06dd12b1bafaeaee81c41dcb7e25" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1aa67c06dd12b1bafaeaee81c41dcb7e25" kindref="member">folder_path</ref><sp/>=<sp/>folder_path</highlight></codeline>
+<codeline lineno="11" refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a957e81a1ab561f6cecfbe999e7b85499" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a957e81a1ab561f6cecfbe999e7b85499" kindref="member">repo_path</ref><sp/>=<sp/><ref refid="namespacepenify__hook_1_1utils_1a95c3f9c80860d6a2e2d061d2fb660a3f" kindref="member">recursive_search_git_folder</ref>(folder_path)</highlight></codeline>
+<codeline lineno="12" refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a3a9ddfa1dfba81fe21214fe486389369" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a3a9ddfa1dfba81fe21214fe486389369" kindref="member">repo</ref><sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="13" refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a9cca3465b0cc00d78324b0a9eac1d7f5" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a9cca3465b0cc00d78324b0a9eac1d7f5" kindref="member">repo_details</ref><sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="14"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1aa67c06dd12b1bafaeaee81c41dcb7e25" kindref="member">folder_path</ref>:</highlight></codeline>
+<codeline lineno="15"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a3a9ddfa1dfba81fe21214fe486389369" kindref="member">repo</ref><sp/>=<sp/>Repo(self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a957e81a1ab561f6cecfbe999e7b85499" kindref="member">repo_path</ref>)</highlight></codeline>
+<codeline lineno="16"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a9cca3465b0cc00d78324b0a9eac1d7f5" kindref="member">repo_details</ref><sp/>=<sp/><ref refid="namespacepenify__hook_1_1utils_1ae236f3c4c8bf5dcddbb92b4c2065eea3" kindref="member">get_repo_details</ref>(self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a3a9ddfa1dfba81fe21214fe486389369" kindref="member">repo</ref>)</highlight></codeline>
+<codeline lineno="17"><highlight class="normal"></highlight></codeline>
+<codeline lineno="18" refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1ab702c0c3ba81d159d7c3bcd7ea2abba4" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1ab702c0c3ba81d159d7c3bcd7ea2abba4" kindref="member">relative_file_path</ref><sp/>=<sp/>os.path.relpath(folder_path)</highlight></codeline>
+<codeline lineno="19" refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a81e9c55709205aaf4ebbe2b41683baf2" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a81e9c55709205aaf4ebbe2b41683baf2" kindref="member">api_client</ref><sp/>=<sp/>api_client</highlight></codeline>
+<codeline lineno="20" refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a0cac0310ec635aa64a34857cf30ce1eb" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a0cac0310ec635aa64a34857cf30ce1eb" kindref="member">supported_file_types</ref><sp/>=<sp/>set(api_client.get_supported_file_types())</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/base_analyzer.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/classException.xml b/docs345/xml/classException.xml
new file mode 100644
index 0000000..2277730
--- /dev/null
+++ b/docs345/xml/classException.xml
@@ -0,0 +1,32 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="classException" kind="class" language="Python" prot="public">
+    <compoundname>Exception</compoundname>
+    <derivedcompoundref refid="classpenify__hook_1_1utils_1_1GitRepoNotFoundError" prot="public" virt="non-virtual">penify_hook.utils.GitRepoNotFoundError</derivedcompoundref>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <inheritancegraph>
+      <node id="1">
+        <label>Exception</label>
+        <link refid="classException"/>
+      </node>
+      <node id="2">
+        <label>penify_hook.utils.GitRepoNotFoundError</label>
+        <link refid="classpenify__hook_1_1utils_1_1GitRepoNotFoundError"/>
+        <childnode refid="1" relation="public-inheritance">
+        </childnode>
+      </node>
+    </inheritancegraph>
+    <collaborationgraph>
+      <node id="1">
+        <label>Exception</label>
+        <link refid="classException"/>
+      </node>
+    </collaborationgraph>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/utils.py" line="9" column="1"/>
+    <listofallmembers>
+    </listofallmembers>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/classpenify__hook_1_1api__client_1_1APIClient.xml b/docs345/xml/classpenify__hook_1_1api__client_1_1APIClient.xml
new file mode 100644
index 0000000..8711c1a
--- /dev/null
+++ b/docs345/xml/classpenify__hook_1_1api__client_1_1APIClient.xml
@@ -0,0 +1,346 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="classpenify__hook_1_1api__client_1_1APIClient" kind="class" language="Python" prot="public">
+    <compoundname>penify_hook::api_client::APIClient</compoundname>
+      <sectiondef kind="public-attrib">
+      <memberdef kind="variable" id="classpenify__hook_1_1api__client_1_1APIClient_1a130cf688ed35dc0e8cbd8320b6b2d872" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook.api_client.APIClient::api_url</definition>
+        <argsstring></argsstring>
+        <name>api_url</name>
+        <qualifiedname>penify_hook.api_client.APIClient.api_url</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py" line="8" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py" bodystart="8" bodyend="-1"/>
+        <referencedby refid="classpenify__hook_1_1api__client_1_1APIClient_1a7ff74798e7d428b4e2f20095287eb2ce" compoundref="api__client_8py" startline="55" endline="101">penify_hook.api_client.APIClient.generate_commit_summary</referencedby>
+        <referencedby refid="classpenify__hook_1_1api__client_1_1APIClient_1ad15b790608e703c8c122aa2ead7dfa99" compoundref="api__client_8py" startline="146" endline="168">penify_hook.api_client.APIClient.get_api_key</referencedby>
+        <referencedby refid="classpenify__hook_1_1api__client_1_1APIClient_1a5d2b4a26b24352d951ea79ecc4ff3402" compoundref="api__client_8py" startline="102" endline="122">penify_hook.api_client.APIClient.get_supported_file_types</referencedby>
+        <referencedby refid="classpenify__hook_1_1api__client_1_1APIClient_1ac5aad61508c2cafdf6e88e6c7d6c82b3" compoundref="api__client_8py" startline="12" endline="54">penify_hook.api_client.APIClient.send_file_for_docstring_generation</referencedby>
+      </memberdef>
+      <memberdef kind="variable" id="classpenify__hook_1_1api__client_1_1APIClient_1a5bb502603717946ad710b49ad9d95237" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook.api_client.APIClient::AUTH_TOKEN</definition>
+        <argsstring></argsstring>
+        <name>AUTH_TOKEN</name>
+        <qualifiedname>penify_hook.api_client.APIClient.AUTH_TOKEN</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py" line="9" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py" bodystart="9" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="classpenify__hook_1_1api__client_1_1APIClient_1a7d7e2cf42c54eb4f25adee96a09ee7b0" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook.api_client.APIClient::BEARER_TOKEN</definition>
+        <argsstring></argsstring>
+        <name>BEARER_TOKEN</name>
+        <qualifiedname>penify_hook.api_client.APIClient.BEARER_TOKEN</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py" line="10" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py" bodystart="10" bodyend="-1"/>
+      </memberdef>
+      </sectiondef>
+      <sectiondef kind="public-func">
+      <memberdef kind="function" id="classpenify__hook_1_1api__client_1_1APIClient_1ad9cb741a8baf2d13f845e25a36311086" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.api_client.APIClient.__init__</definition>
+        <argsstring>(self, api_url, str api_token=None, str bearer_token=None)</argsstring>
+        <name>__init__</name>
+        <qualifiedname>penify_hook.api_client.APIClient.__init__</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type><ref refid="classpenify__hook_1_1api__client_1_1APIClient_1a130cf688ed35dc0e8cbd8320b6b2d872" kindref="member">api_url</ref></type>
+          <defname>api_url</defname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>api_token</declname>
+          <defval>None</defval>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>bearer_token</declname>
+          <defval>None</defval>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py" line="7" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py" bodystart="7" bodyend="11"/>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1api__client_1_1APIClient_1ac5aad61508c2cafdf6e88e6c7d6c82b3" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.api_client.APIClient.send_file_for_docstring_generation</definition>
+        <argsstring>(self, file_name, content, line_numbers, repo_details=None)</argsstring>
+        <name>send_file_for_docstring_generation</name>
+        <qualifiedname>penify_hook.api_client.APIClient.send_file_for_docstring_generation</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>file_name</type>
+          <defname>file_name</defname>
+        </param>
+        <param>
+          <type>content</type>
+          <defname>content</defname>
+        </param>
+        <param>
+          <type>line_numbers</type>
+          <defname>line_numbers</defname>
+        </param>
+        <param>
+          <type>repo_details</type>
+          <defname>repo_details</defname>
+          <defval>None</defval>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Send file content and modified lines to the API and return modified
+content.
+
+This function constructs a payload containing the file path, content,
+and modified line numbers, and sends it to a specified API endpoint for
+processing. It handles the response from the API, returning the modified
+content if the request is successful. If the request fails, it logs the
+error details and returns the original content.
+
+Args:
+    file_name (str): The path to the file being sent.
+    content (str): The content of the file to be processed.
+    line_numbers (list): A list of line numbers that have been modified.
+    repo_details (str?): Additional repository details if applicable. Defaults to None.
+
+Returns:
+    str: The modified content returned by the API, or the original content if the
+        request fails.
+
+Raises:
+    Exception: If there is an error in processing the file and no specific error
+        message is provided.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py" line="12" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py" bodystart="12" bodyend="54"/>
+        <references refid="classpenify__hook_1_1api__client_1_1APIClient_1a130cf688ed35dc0e8cbd8320b6b2d872" compoundref="api__client_8py" startline="8">penify_hook.api_client.APIClient.api_url</references>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1api__client_1_1APIClient_1a7ff74798e7d428b4e2f20095287eb2ce" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.api_client.APIClient.generate_commit_summary</definition>
+        <argsstring>(self, git_diff, str instruction=&quot;&quot;, repo_details=None, dict jira_context=None)</argsstring>
+        <name>generate_commit_summary</name>
+        <qualifiedname>penify_hook.api_client.APIClient.generate_commit_summary</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>git_diff</type>
+          <defname>git_diff</defname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>instruction</declname>
+          <defval>&quot;&quot;</defval>
+        </param>
+        <param>
+          <type>repo_details</type>
+          <defname>repo_details</defname>
+          <defval>None</defval>
+        </param>
+        <param>
+          <type>dict</type>
+          <declname>jira_context</declname>
+          <defval>None</defval>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Generate a commit summary by sending a POST request to the API endpoint.
+
+This function constructs a payload containing the git diff and any
+additional instructions provided. It then sends this payload to a
+specified API endpoint to generate a summary of the commit. If the
+request is successful, it returns the response from the API; otherwise,
+it returns None.
+
+Args:
+    git_diff (str): The git diff of the commit.
+    instruction (str??): Additional instruction for the commit. Defaults to &quot;&quot;.
+    repo_details (dict??): Details of the git repository. Defaults to None.
+    jira_context (dict??): JIRA issue details to enhance the commit summary. Defaults to None.
+
+Returns:
+    dict: The response from the API if the request is successful, None otherwise.
+
+Raises:
+    Exception: If there is an error during the API request.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py" line="55" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py" bodystart="55" bodyend="101"/>
+        <references refid="classpenify__hook_1_1api__client_1_1APIClient_1a130cf688ed35dc0e8cbd8320b6b2d872" compoundref="api__client_8py" startline="8">penify_hook.api_client.APIClient.api_url</references>
+        <referencedby refid="classpenify__hook_1_1api__client_1_1APIClient_1ac0ada470b897935f9fb372cd0e7e51e3" compoundref="api__client_8py" startline="123" endline="145">penify_hook.api_client.APIClient.generate_commit_summary_with_llm</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1api__client_1_1APIClient_1a5d2b4a26b24352d951ea79ecc4ff3402" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>list[str]</type>
+        <definition> list[str] penify_hook.api_client.APIClient.get_supported_file_types</definition>
+        <argsstring>(self)</argsstring>
+        <name>get_supported_file_types</name>
+        <qualifiedname>penify_hook.api_client.APIClient.get_supported_file_types</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Retrieve the supported file types from the API.
+
+This function sends a request to the API endpoint
+`/v1/file/supported_languages` to obtain a list of supported file types.
+If the API call is successful (status code 200), it parses the JSON
+response and returns the list of supported file types. If the API call
+fails, it returns a default list of common file types.
+
+Returns:
+    list[str]: A list of supported file types, either from the API or a default set.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py" line="102" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py" bodystart="102" bodyend="122"/>
+        <references refid="classpenify__hook_1_1api__client_1_1APIClient_1a130cf688ed35dc0e8cbd8320b6b2d872" compoundref="api__client_8py" startline="8">penify_hook.api_client.APIClient.api_url</references>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1api__client_1_1APIClient_1ac0ada470b897935f9fb372cd0e7e51e3" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.api_client.APIClient.generate_commit_summary_with_llm</definition>
+        <argsstring>(self, diff, message, bool generate_description, repo_details, LLMClient llm_client, jira_context=None)</argsstring>
+        <name>generate_commit_summary_with_llm</name>
+        <qualifiedname>penify_hook.api_client.APIClient.generate_commit_summary_with_llm</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>diff</type>
+          <defname>diff</defname>
+        </param>
+        <param>
+          <type>message</type>
+          <defname>message</defname>
+        </param>
+        <param>
+          <type>bool</type>
+          <declname>generate_description</declname>
+        </param>
+        <param>
+          <type>repo_details</type>
+          <defname>repo_details</defname>
+        </param>
+        <param>
+          <type><ref refid="classpenify__hook_1_1llm__client_1_1LLMClient" kindref="compound">LLMClient</ref></type>
+          <declname>llm_client</declname>
+        </param>
+        <param>
+          <type>jira_context</type>
+          <defname>jira_context</defname>
+          <defval>None</defval>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Generates a commit summary using a local LLM client. If an error occurs
+during the generation process,
+it falls back to using the API.
+
+Args:
+    diff (str): The Git diff of changes.
+    message (str): User-provided commit message or instructions.
+    generate_description (bool): Flag indicating whether to generate a description for the commit.
+    repo_details (dict): Details about the repository.
+    llm_client (LLMClient): An instance of LLMClient used to generate the summary.
+    jira_context (JIRAContext?): Optional JIRA issue context to enhance the summary.
+
+Returns:
+    dict: A dictionary containing the title and description for the commit.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py" line="123" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py" bodystart="123" bodyend="145"/>
+        <references refid="classpenify__hook_1_1api__client_1_1APIClient_1a7ff74798e7d428b4e2f20095287eb2ce" compoundref="api__client_8py" startline="55" endline="101">penify_hook.api_client.APIClient.generate_commit_summary</references>
+        <references refid="classpenify__hook_1_1llm__client_1_1LLMClient_1a2ad3014dac466ee1d8e00306d0cf2000" compoundref="llm__client_8py" startline="40" endline="177">penify_hook.llm_client.LLMClient.generate_commit_summary</references>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1api__client_1_1APIClient_1ad15b790608e703c8c122aa2ead7dfa99" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.api_client.APIClient.get_api_key</definition>
+        <argsstring>(self)</argsstring>
+        <name>get_api_key</name>
+        <qualifiedname>penify_hook.api_client.APIClient.get_api_key</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Fetch an API key from a specified URL.
+
+This function sends a GET request to retrieve an API token using a
+Bearer token in the headers. It handles the response and returns the API
+key if the request is successful, or `None` otherwise.
+
+Returns:
+    str: The API key if the request is successful, `None` otherwise.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py" line="146" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py" bodystart="146" bodyend="168"/>
+        <references refid="classpenify__hook_1_1api__client_1_1APIClient_1a130cf688ed35dc0e8cbd8320b6b2d872" compoundref="api__client_8py" startline="8">penify_hook.api_client.APIClient.api_url</references>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <collaborationgraph>
+      <node id="1">
+        <label>penify_hook.api_client.APIClient</label>
+        <link refid="classpenify__hook_1_1api__client_1_1APIClient"/>
+      </node>
+    </collaborationgraph>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py" line="6" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py" bodystart="6" bodyend="168"/>
+    <listofallmembers>
+      <member refid="classpenify__hook_1_1api__client_1_1APIClient_1ad9cb741a8baf2d13f845e25a36311086" prot="public" virt="non-virtual"><scope>penify_hook::api_client::APIClient</scope><name>__init__</name></member>
+      <member refid="classpenify__hook_1_1api__client_1_1APIClient_1a130cf688ed35dc0e8cbd8320b6b2d872" prot="public" virt="non-virtual"><scope>penify_hook::api_client::APIClient</scope><name>api_url</name></member>
+      <member refid="classpenify__hook_1_1api__client_1_1APIClient_1a5bb502603717946ad710b49ad9d95237" prot="public" virt="non-virtual"><scope>penify_hook::api_client::APIClient</scope><name>AUTH_TOKEN</name></member>
+      <member refid="classpenify__hook_1_1api__client_1_1APIClient_1a7d7e2cf42c54eb4f25adee96a09ee7b0" prot="public" virt="non-virtual"><scope>penify_hook::api_client::APIClient</scope><name>BEARER_TOKEN</name></member>
+      <member refid="classpenify__hook_1_1api__client_1_1APIClient_1a7ff74798e7d428b4e2f20095287eb2ce" prot="public" virt="non-virtual"><scope>penify_hook::api_client::APIClient</scope><name>generate_commit_summary</name></member>
+      <member refid="classpenify__hook_1_1api__client_1_1APIClient_1ac0ada470b897935f9fb372cd0e7e51e3" prot="public" virt="non-virtual"><scope>penify_hook::api_client::APIClient</scope><name>generate_commit_summary_with_llm</name></member>
+      <member refid="classpenify__hook_1_1api__client_1_1APIClient_1ad15b790608e703c8c122aa2ead7dfa99" prot="public" virt="non-virtual"><scope>penify_hook::api_client::APIClient</scope><name>get_api_key</name></member>
+      <member refid="classpenify__hook_1_1api__client_1_1APIClient_1a5d2b4a26b24352d951ea79ecc4ff3402" prot="public" virt="non-virtual"><scope>penify_hook::api_client::APIClient</scope><name>get_supported_file_types</name></member>
+      <member refid="classpenify__hook_1_1api__client_1_1APIClient_1ac5aad61508c2cafdf6e88e6c7d6c82b3" prot="public" virt="non-virtual"><scope>penify_hook::api_client::APIClient</scope><name>send_file_for_docstring_generation</name></member>
+    </listofallmembers>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.xml b/docs345/xml/classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.xml
new file mode 100644
index 0000000..78661b0
--- /dev/null
+++ b/docs345/xml/classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.xml
@@ -0,0 +1,211 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer" kind="class" language="Python" prot="public">
+    <compoundname>penify_hook::base_analyzer::BaseAnalyzer</compoundname>
+    <derivedcompoundref refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook" prot="public" virt="non-virtual">penify_hook.commit_analyzer.CommitDocGenHook</derivedcompoundref>
+    <derivedcompoundref refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook" prot="public" virt="non-virtual">penify_hook.file_analyzer.FileAnalyzerGenHook</derivedcompoundref>
+    <derivedcompoundref refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook" prot="public" virt="non-virtual">penify_hook.folder_analyzer.FolderAnalyzerGenHook</derivedcompoundref>
+    <derivedcompoundref refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook" prot="public" virt="non-virtual">penify_hook.git_analyzer.GitDocGenHook</derivedcompoundref>
+      <sectiondef kind="public-attrib">
+      <memberdef kind="variable" id="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1aa67c06dd12b1bafaeaee81c41dcb7e25" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook.base_analyzer.BaseAnalyzer::folder_path</definition>
+        <argsstring></argsstring>
+        <name>folder_path</name>
+        <qualifiedname>penify_hook.base_analyzer.BaseAnalyzer.folder_path</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/base_analyzer.py" line="10" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/base_analyzer.py" bodystart="10" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a957e81a1ab561f6cecfbe999e7b85499" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook.base_analyzer.BaseAnalyzer::repo_path</definition>
+        <argsstring></argsstring>
+        <name>repo_path</name>
+        <qualifiedname>penify_hook.base_analyzer.BaseAnalyzer.repo_path</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/base_analyzer.py" line="11" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/base_analyzer.py" bodystart="11" bodyend="-1"/>
+        <referencedby refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1ac999c5cbc852a7ec3b412ccb43c274ca" compoundref="commit__analyzer_8py" startline="162" endline="183">penify_hook.commit_analyzer.CommitDocGenHook._amend_commit</referencedby>
+        <referencedby refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a05313caa22b173ce75638f0db08eeb85" compoundref="git__analyzer_8py" startline="91" endline="151">penify_hook.git_analyzer.GitDocGenHook.process_file</referencedby>
+      </memberdef>
+      <memberdef kind="variable" id="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a3a9ddfa1dfba81fe21214fe486389369" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook.base_analyzer.BaseAnalyzer::repo</definition>
+        <argsstring></argsstring>
+        <name>repo</name>
+        <qualifiedname>penify_hook.base_analyzer.BaseAnalyzer.repo</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/base_analyzer.py" line="12" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/base_analyzer.py" bodystart="12" bodyend="-1"/>
+        <referencedby refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a17549766100e91eb94b5f1a1d34bf481" compoundref="git__analyzer_8py" startline="23" endline="41">penify_hook.git_analyzer.GitDocGenHook.get_modified_files_in_last_commit</referencedby>
+        <referencedby refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a8496194276441fa2eb2fa014eaab9a37" compoundref="commit__analyzer_8py" startline="21" endline="72">penify_hook.commit_analyzer.CommitDocGenHook.get_summary</referencedby>
+        <referencedby refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a05313caa22b173ce75638f0db08eeb85" compoundref="git__analyzer_8py" startline="91" endline="151">penify_hook.git_analyzer.GitDocGenHook.process_file</referencedby>
+        <referencedby refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1adda13cc121d96342476ccf72b63a007f" compoundref="commit__analyzer_8py" startline="113" endline="161">penify_hook.commit_analyzer.CommitDocGenHook.process_jira_integration</referencedby>
+        <referencedby refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a3beba14e92d717391a74bb70b1fab0ae" compoundref="git__analyzer_8py" startline="152" endline="197">penify_hook.git_analyzer.GitDocGenHook.run</referencedby>
+        <referencedby refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a6370a03f7ed9175ef6f81e931a105ea9" compoundref="commit__analyzer_8py" startline="73" endline="112">penify_hook.commit_analyzer.CommitDocGenHook.run</referencedby>
+      </memberdef>
+      <memberdef kind="variable" id="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a9cca3465b0cc00d78324b0a9eac1d7f5" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook.base_analyzer.BaseAnalyzer::repo_details</definition>
+        <argsstring></argsstring>
+        <name>repo_details</name>
+        <qualifiedname>penify_hook.base_analyzer.BaseAnalyzer.repo_details</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
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+        <referencedby refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a8496194276441fa2eb2fa014eaab9a37" compoundref="commit__analyzer_8py" startline="21" endline="72">penify_hook.commit_analyzer.CommitDocGenHook.get_summary</referencedby>
+        <referencedby refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a05313caa22b173ce75638f0db08eeb85" compoundref="git__analyzer_8py" startline="91" endline="151">penify_hook.git_analyzer.GitDocGenHook.process_file</referencedby>
+        <referencedby refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a2cc6c22ef588fccf3eed9bbc57fb6d6e" compoundref="file__analyzer_8py" startline="27" endline="95">penify_hook.file_analyzer.FileAnalyzerGenHook.process_file</referencedby>
+      </memberdef>
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+        <type></type>
+        <definition>penify_hook.base_analyzer.BaseAnalyzer::relative_file_path</definition>
+        <argsstring></argsstring>
+        <name>relative_file_path</name>
+        <qualifiedname>penify_hook.base_analyzer.BaseAnalyzer.relative_file_path</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
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+        <type></type>
+        <definition>penify_hook.base_analyzer.BaseAnalyzer::api_client</definition>
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+        <name>api_client</name>
+        <qualifiedname>penify_hook.base_analyzer.BaseAnalyzer.api_client</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
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+        </inbodydescription>
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+        <type></type>
+        <definition>penify_hook.base_analyzer.BaseAnalyzer::supported_file_types</definition>
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+        <name>supported_file_types</name>
+        <qualifiedname>penify_hook.base_analyzer.BaseAnalyzer.supported_file_types</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
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+      </memberdef>
+      </sectiondef>
+      <sectiondef kind="public-func">
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+        <type>def</type>
+        <definition>def penify_hook.base_analyzer.BaseAnalyzer.__init__</definition>
+        <argsstring>(self, str folder_path, APIClient api_client)</argsstring>
+        <name>__init__</name>
+        <qualifiedname>penify_hook.base_analyzer.BaseAnalyzer.__init__</qualifiedname>
+        <reimplementedby refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a1bb0358140931d82c7616f12efe31821">__init__</reimplementedby>
+        <reimplementedby refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a190c473090b2a07e7cb43073a3211c4b">__init__</reimplementedby>
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+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>folder_path</declname>
+        </param>
+        <param>
+          <type><ref refid="classpenify__hook_1_1api__client_1_1APIClient" kindref="compound">APIClient</ref></type>
+          <declname>api_client</declname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
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+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/base_analyzer.py" line="9" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/base_analyzer.py" bodystart="9" bodyend="21"/>
+      </memberdef>
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+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
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+        <label>penify_hook.base_analyzer.BaseAnalyzer</label>
+        <link refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"/>
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+        <link refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook"/>
+        <childnode refid="1" relation="public-inheritance">
+        </childnode>
+      </node>
+      <node id="3">
+        <label>penify_hook.file_analyzer.FileAnalyzerGenHook</label>
+        <link refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook"/>
+        <childnode refid="1" relation="public-inheritance">
+        </childnode>
+      </node>
+      <node id="4">
+        <label>penify_hook.folder_analyzer.FolderAnalyzerGenHook</label>
+        <link refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook"/>
+        <childnode refid="1" relation="public-inheritance">
+        </childnode>
+      </node>
+      <node id="5">
+        <label>penify_hook.git_analyzer.GitDocGenHook</label>
+        <link refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook"/>
+        <childnode refid="1" relation="public-inheritance">
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+      <node id="1">
+        <label>penify_hook.base_analyzer.BaseAnalyzer</label>
+        <link refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"/>
+      </node>
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+      <member refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1aa67c06dd12b1bafaeaee81c41dcb7e25" prot="public" virt="non-virtual"><scope>penify_hook::base_analyzer::BaseAnalyzer</scope><name>folder_path</name></member>
+      <member refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1ab702c0c3ba81d159d7c3bcd7ea2abba4" prot="public" virt="non-virtual"><scope>penify_hook::base_analyzer::BaseAnalyzer</scope><name>relative_file_path</name></member>
+      <member refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a3a9ddfa1dfba81fe21214fe486389369" prot="public" virt="non-virtual"><scope>penify_hook::base_analyzer::BaseAnalyzer</scope><name>repo</name></member>
+      <member refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a9cca3465b0cc00d78324b0a9eac1d7f5" prot="public" virt="non-virtual"><scope>penify_hook::base_analyzer::BaseAnalyzer</scope><name>repo_details</name></member>
+      <member refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a957e81a1ab561f6cecfbe999e7b85499" prot="public" virt="non-virtual"><scope>penify_hook::base_analyzer::BaseAnalyzer</scope><name>repo_path</name></member>
+      <member refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a0cac0310ec635aa64a34857cf30ce1eb" prot="public" virt="non-virtual"><scope>penify_hook::base_analyzer::BaseAnalyzer</scope><name>supported_file_types</name></member>
+    </listofallmembers>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook.xml b/docs345/xml/classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook.xml
new file mode 100644
index 0000000..8d77f23
--- /dev/null
+++ b/docs345/xml/classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook.xml
@@ -0,0 +1,288 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook" kind="class" language="Python" prot="public">
+    <compoundname>penify_hook::commit_analyzer::CommitDocGenHook</compoundname>
+    <basecompoundref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer" prot="public" virt="non-virtual">penify_hook.base_analyzer.BaseAnalyzer</basecompoundref>
+      <sectiondef kind="public-attrib">
+      <memberdef kind="variable" id="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1ad93360e31f2ec58a0d7c9f08b219028a" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook.commit_analyzer.CommitDocGenHook::llm_client</definition>
+        <argsstring></argsstring>
+        <name>llm_client</name>
+        <qualifiedname>penify_hook.commit_analyzer.CommitDocGenHook.llm_client</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commit_analyzer.py" line="18" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commit_analyzer.py" bodystart="18" bodyend="-1"/>
+        <referencedby refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a8496194276441fa2eb2fa014eaab9a37" compoundref="commit__analyzer_8py" startline="21" endline="72">penify_hook.commit_analyzer.CommitDocGenHook.get_summary</referencedby>
+      </memberdef>
+      </sectiondef>
+      <sectiondef kind="public-func">
+      <memberdef kind="function" id="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1af127d86729e226d74dbeb095b008db3e" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.commit_analyzer.CommitDocGenHook.__init__</definition>
+        <argsstring>(self, str repo_path, APIClient api_client, llm_client=None, jira_client=None)</argsstring>
+        <name>__init__</name>
+        <qualifiedname>penify_hook.commit_analyzer.CommitDocGenHook.__init__</qualifiedname>
+        <reimplements refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1ab1296a3d1e9070d891801876b66f7344">__init__</reimplements>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>repo_path</declname>
+        </param>
+        <param>
+          <type><ref refid="classpenify__hook_1_1api__client_1_1APIClient" kindref="compound">APIClient</ref></type>
+          <declname>api_client</declname>
+        </param>
+        <param>
+          <type><ref refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1ad93360e31f2ec58a0d7c9f08b219028a" kindref="member">llm_client</ref></type>
+          <defname>llm_client</defname>
+          <defval>None</defval>
+        </param>
+        <param>
+          <type>jira_client</type>
+          <defname>jira_client</defname>
+          <defval>None</defval>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commit_analyzer.py" line="15" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commit_analyzer.py" bodystart="15" bodyend="20"/>
+        <references refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1af127d86729e226d74dbeb095b008db3e" compoundref="commit__analyzer_8py" startline="15" endline="20">penify_hook.commit_analyzer.CommitDocGenHook.__init__</references>
+        <referencedby refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1af127d86729e226d74dbeb095b008db3e" compoundref="commit__analyzer_8py" startline="15" endline="20">penify_hook.commit_analyzer.CommitDocGenHook.__init__</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a8496194276441fa2eb2fa014eaab9a37" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>dict</type>
+        <definition> dict penify_hook.commit_analyzer.CommitDocGenHook.get_summary</definition>
+        <argsstring>(self, str instruction, bool generate_description)</argsstring>
+        <name>get_summary</name>
+        <qualifiedname>penify_hook.commit_analyzer.CommitDocGenHook.get_summary</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>instruction</declname>
+        </param>
+        <param>
+          <type>bool</type>
+          <declname>generate_description</declname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Generate a summary for the commit based on the staged changes.
+
+This function retrieves the differences of the staged changes in the
+repository and generates a commit summary using the provided
+instruction. If there are no changes staged for commit, an exception is
+raised. If a JIRA client is connected, it will attempt to extract issue
+keys from the current branch and use them to fetch context. The summary
+can be generated either with a Language Model (LLM) client or through
+the API client.
+
+Args:
+    instruction (str): A string containing instructions for generating the commit summary.
+    generate_description (bool): Whether to include detailed descriptions in the summary.
+
+Returns:
+    dict: The generated commit summary based on the staged changes, provided
+        instruction, and any relevant JIRA context. The dictionary contains keys
+        such as &apos;summary&apos;, &apos;description&apos;, etc., depending on whether a
+        description was requested.
+
+Raises:
+    ValueError: If there are no changes staged for commit.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commit_analyzer.py" line="21" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commit_analyzer.py" bodystart="21" bodyend="72"/>
+        <references refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a81e9c55709205aaf4ebbe2b41683baf2" compoundref="base__analyzer_8py" startline="19">penify_hook.base_analyzer.BaseAnalyzer.api_client</references>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6" compoundref="jira__client_8py" startline="29">penify_hook.jira_client.JiraClient.jira_client</references>
+        <references refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1ad93360e31f2ec58a0d7c9f08b219028a" compoundref="commit__analyzer_8py" startline="18">penify_hook.commit_analyzer.CommitDocGenHook.llm_client</references>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" compoundref="ui__utils_8py" startline="108" endline="119">penify_hook.ui_utils.print_info</references>
+        <references refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a3a9ddfa1dfba81fe21214fe486389369" compoundref="base__analyzer_8py" startline="12">penify_hook.base_analyzer.BaseAnalyzer.repo</references>
+        <references refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a9cca3465b0cc00d78324b0a9eac1d7f5" compoundref="base__analyzer_8py" startline="13">penify_hook.base_analyzer.BaseAnalyzer.repo_details</references>
+        <referencedby refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a6370a03f7ed9175ef6f81e931a105ea9" compoundref="commit__analyzer_8py" startline="73" endline="112">penify_hook.commit_analyzer.CommitDocGenHook.run</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a6370a03f7ed9175ef6f81e931a105ea9" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.commit_analyzer.CommitDocGenHook.run</definition>
+        <argsstring>(self, Optional[str] msg, bool edit_commit_message, bool generate_description)</argsstring>
+        <name>run</name>
+        <qualifiedname>penify_hook.commit_analyzer.CommitDocGenHook.run</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>Optional</type>
+          <declname>msg</declname>
+          <array>[str]</array>
+        </param>
+        <param>
+          <type>bool</type>
+          <declname>edit_commit_message</declname>
+        </param>
+        <param>
+          <type>bool</type>
+          <declname>generate_description</declname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Run the post-commit hook.
+
+This method processes the modified files from the last commit, stages
+them, and creates an auto-commit with an optional message. It also
+handles JIRA integration if available. If there is an error generating
+the commit summary, an exception is raised.
+
+Args:
+    msg (Optional[str]): An optional message to include in the commit.
+    edit_commit_message (bool): A flag indicating whether to open the git commit edit terminal after
+        committing.
+    generate_description (bool): A flag indicating whether to include a description in the commit
+        message.
+
+Raises:
+    Exception: If there is an error generating the commit summary.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commit_analyzer.py" line="73" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commit_analyzer.py" bodystart="73" bodyend="112"/>
+        <references refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1ac999c5cbc852a7ec3b412ccb43c274ca" compoundref="commit__analyzer_8py" startline="162" endline="183">penify_hook.commit_analyzer.CommitDocGenHook._amend_commit</references>
+        <references refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a8496194276441fa2eb2fa014eaab9a37" compoundref="commit__analyzer_8py" startline="21" endline="72">penify_hook.commit_analyzer.CommitDocGenHook.get_summary</references>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6" compoundref="jira__client_8py" startline="29">penify_hook.jira_client.JiraClient.jira_client</references>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" compoundref="ui__utils_8py" startline="108" endline="119">penify_hook.ui_utils.print_info</references>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a2b16aa6b68a9edea5f29f84f1c4be79a" compoundref="ui__utils_8py" startline="120" endline="131">penify_hook.ui_utils.print_success</references>
+        <references refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1adda13cc121d96342476ccf72b63a007f" compoundref="commit__analyzer_8py" startline="113" endline="161">penify_hook.commit_analyzer.CommitDocGenHook.process_jira_integration</references>
+        <references refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a3a9ddfa1dfba81fe21214fe486389369" compoundref="base__analyzer_8py" startline="12">penify_hook.base_analyzer.BaseAnalyzer.repo</references>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1adda13cc121d96342476ccf72b63a007f" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>tuple</type>
+        <definition> tuple penify_hook.commit_analyzer.CommitDocGenHook.process_jira_integration</definition>
+        <argsstring>(self, str title, str description, str msg)</argsstring>
+        <name>process_jira_integration</name>
+        <qualifiedname>penify_hook.commit_analyzer.CommitDocGenHook.process_jira_integration</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>title</declname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>description</declname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>msg</declname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Process JIRA integration for the commit message.
+
+Args:
+    title (str): Generated commit title.
+    description (str): Generated commit description.
+    msg (str): Original user message that might contain JIRA references.
+
+Returns:
+    tuple: A tuple containing the updated commit title and description with
+        included JIRA information.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commit_analyzer.py" line="113" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commit_analyzer.py" bodystart="113" bodyend="161"/>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6" compoundref="jira__client_8py" startline="29">penify_hook.jira_client.JiraClient.jira_client</references>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" compoundref="ui__utils_8py" startline="108" endline="119">penify_hook.ui_utils.print_info</references>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a1ffbb9671dbe233770268e2dd66a67fa" compoundref="ui__utils_8py" startline="132" endline="143">penify_hook.ui_utils.print_warning</references>
+        <references refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a3a9ddfa1dfba81fe21214fe486389369" compoundref="base__analyzer_8py" startline="12">penify_hook.base_analyzer.BaseAnalyzer.repo</references>
+        <referencedby refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a6370a03f7ed9175ef6f81e931a105ea9" compoundref="commit__analyzer_8py" startline="73" endline="112">penify_hook.commit_analyzer.CommitDocGenHook.run</referencedby>
+      </memberdef>
+      </sectiondef>
+      <sectiondef kind="private-func">
+      <memberdef kind="function" id="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1ac999c5cbc852a7ec3b412ccb43c274ca" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.commit_analyzer.CommitDocGenHook._amend_commit</definition>
+        <argsstring>(self)</argsstring>
+        <name>_amend_commit</name>
+        <qualifiedname>penify_hook.commit_analyzer.CommitDocGenHook._amend_commit</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Open the default git editor for editing the commit message.
+
+This function changes the current working directory to the repository
+path, runs the git command to amend the last commit, and opens the
+default editor for the user to modify the commit message. After the
+operation, it returns to the original directory.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commit_analyzer.py" line="162" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commit_analyzer.py" bodystart="162" bodyend="183"/>
+        <references refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a957e81a1ab561f6cecfbe999e7b85499" compoundref="base__analyzer_8py" startline="11">penify_hook.base_analyzer.BaseAnalyzer.repo_path</references>
+        <referencedby refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a6370a03f7ed9175ef6f81e931a105ea9" compoundref="commit__analyzer_8py" startline="73" endline="112">penify_hook.commit_analyzer.CommitDocGenHook.run</referencedby>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <inheritancegraph>
+      <node id="1">
+        <label>penify_hook.commit_analyzer.CommitDocGenHook</label>
+        <link refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook"/>
+        <childnode refid="2" relation="public-inheritance">
+        </childnode>
+      </node>
+      <node id="2">
+        <label>penify_hook.base_analyzer.BaseAnalyzer</label>
+        <link refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"/>
+      </node>
+    </inheritancegraph>
+    <collaborationgraph>
+      <node id="1">
+        <label>penify_hook.commit_analyzer.CommitDocGenHook</label>
+        <link refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook"/>
+        <childnode refid="2" relation="public-inheritance">
+        </childnode>
+      </node>
+      <node id="2">
+        <label>penify_hook.base_analyzer.BaseAnalyzer</label>
+        <link refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"/>
+      </node>
+    </collaborationgraph>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commit_analyzer.py" line="14" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commit_analyzer.py" bodystart="14" bodyend="183"/>
+    <listofallmembers>
+      <member refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1af127d86729e226d74dbeb095b008db3e" prot="public" virt="non-virtual"><scope>penify_hook::commit_analyzer::CommitDocGenHook</scope><name>__init__</name></member>
+      <member refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1ac999c5cbc852a7ec3b412ccb43c274ca" prot="private" virt="non-virtual"><scope>penify_hook::commit_analyzer::CommitDocGenHook</scope><name>_amend_commit</name></member>
+      <member refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a8496194276441fa2eb2fa014eaab9a37" prot="public" virt="non-virtual"><scope>penify_hook::commit_analyzer::CommitDocGenHook</scope><name>get_summary</name></member>
+      <member refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1ad93360e31f2ec58a0d7c9f08b219028a" prot="public" virt="non-virtual"><scope>penify_hook::commit_analyzer::CommitDocGenHook</scope><name>llm_client</name></member>
+      <member refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1adda13cc121d96342476ccf72b63a007f" prot="public" virt="non-virtual"><scope>penify_hook::commit_analyzer::CommitDocGenHook</scope><name>process_jira_integration</name></member>
+      <member refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a6370a03f7ed9175ef6f81e931a105ea9" prot="public" virt="non-virtual"><scope>penify_hook::commit_analyzer::CommitDocGenHook</scope><name>run</name></member>
+    </listofallmembers>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook.xml b/docs345/xml/classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook.xml
new file mode 100644
index 0000000..c07f4fd
--- /dev/null
+++ b/docs345/xml/classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook.xml
@@ -0,0 +1,184 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook" kind="class" language="Python" prot="public">
+    <compoundname>penify_hook::file_analyzer::FileAnalyzerGenHook</compoundname>
+    <basecompoundref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer" prot="public" virt="non-virtual">penify_hook.base_analyzer.BaseAnalyzer</basecompoundref>
+      <sectiondef kind="public-attrib">
+      <memberdef kind="variable" id="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a9b03b88a9ce1b9af945279375048dc32" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook.file_analyzer.FileAnalyzerGenHook::file_path</definition>
+        <argsstring></argsstring>
+        <name>file_path</name>
+        <qualifiedname>penify_hook.file_analyzer.FileAnalyzerGenHook.file_path</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/file_analyzer.py" line="22" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/file_analyzer.py" bodystart="22" bodyend="-1"/>
+        <referencedby refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a4f4dffbc432fac3e259d957dd1e187f1" compoundref="file__analyzer_8py" startline="101" endline="144">penify_hook.file_analyzer.FileAnalyzerGenHook.run</referencedby>
+      </memberdef>
+      </sectiondef>
+      <sectiondef kind="public-func">
+      <memberdef kind="function" id="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a190c473090b2a07e7cb43073a3211c4b" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.file_analyzer.FileAnalyzerGenHook.__init__</definition>
+        <argsstring>(self, str file_path, APIClient api_client)</argsstring>
+        <name>__init__</name>
+        <qualifiedname>penify_hook.file_analyzer.FileAnalyzerGenHook.__init__</qualifiedname>
+        <reimplements refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1ab1296a3d1e9070d891801876b66f7344">__init__</reimplements>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>file_path</declname>
+        </param>
+        <param>
+          <type><ref refid="classpenify__hook_1_1api__client_1_1APIClient" kindref="compound">APIClient</ref></type>
+          <declname>api_client</declname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/file_analyzer.py" line="21" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/file_analyzer.py" bodystart="21" bodyend="26"/>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a2cc6c22ef588fccf3eed9bbc57fb6d6e" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.file_analyzer.FileAnalyzerGenHook.process_file</definition>
+        <argsstring>(self, file_path, pbar, str new_param=&quot;&quot;)</argsstring>
+        <name>process_file</name>
+        <qualifiedname>penify_hook.file_analyzer.FileAnalyzerGenHook.process_file</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type><ref refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a9b03b88a9ce1b9af945279375048dc32" kindref="member">file_path</ref></type>
+          <defname>file_path</defname>
+        </param>
+        <param>
+          <type>pbar</type>
+          <defname>pbar</defname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>new_param</declname>
+          <defval>&quot;&quot;</defval>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Processes a file by validating its extension, reading content, generating documentation,
+and writing changes back to the file.
+
+Args:
+    file_path (str): The path of the file to be processed.
+    pbar (tqdm.tqdm): A progress bar object to update the status of processing stages.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/file_analyzer.py" line="27" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/file_analyzer.py" bodystart="27" bodyend="95"/>
+        <references refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a81e9c55709205aaf4ebbe2b41683baf2" compoundref="base__analyzer_8py" startline="19">penify_hook.base_analyzer.BaseAnalyzer.api_client</references>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a1ffbb9671dbe233770268e2dd66a67fa" compoundref="ui__utils_8py" startline="132" endline="143">penify_hook.ui_utils.print_warning</references>
+        <references refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1ab702c0c3ba81d159d7c3bcd7ea2abba4" compoundref="base__analyzer_8py" startline="18">penify_hook.base_analyzer.BaseAnalyzer.relative_file_path</references>
+        <references refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a9cca3465b0cc00d78324b0a9eac1d7f5" compoundref="base__analyzer_8py" startline="13">penify_hook.base_analyzer.BaseAnalyzer.repo_details</references>
+        <references refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a0cac0310ec635aa64a34857cf30ce1eb" compoundref="base__analyzer_8py" startline="20">penify_hook.base_analyzer.BaseAnalyzer.supported_file_types</references>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a5a7340d0fc60fb80f17514d60bf45f1d" compoundref="ui__utils_8py" startline="233" endline="249">penify_hook.ui_utils.update_stage</references>
+        <referencedby refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a4f4dffbc432fac3e259d957dd1e187f1" compoundref="file__analyzer_8py" startline="101" endline="144">penify_hook.file_analyzer.FileAnalyzerGenHook.run</referencedby>
+        <referencedby refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a3beba14e92d717391a74bb70b1fab0ae" compoundref="git__analyzer_8py" startline="152" endline="197">penify_hook.git_analyzer.GitDocGenHook.run</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a6ab39391dfb7686f2a2d21a702dd3073" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.file_analyzer.FileAnalyzerGenHook.print_processing</definition>
+        <argsstring>(self, file_path)</argsstring>
+        <name>print_processing</name>
+        <qualifiedname>penify_hook.file_analyzer.FileAnalyzerGenHook.print_processing</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type><ref refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a9b03b88a9ce1b9af945279375048dc32" kindref="member">file_path</ref></type>
+          <defname>file_path</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Prints a formatted message indicating that a file is being processed.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/file_analyzer.py" line="96" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/file_analyzer.py" bodystart="96" bodyend="100"/>
+        <references refid="namespacepenify__hook_1_1ui__utils_1af3441fb3c2c3850b8b3b6455a9fdaba4" compoundref="ui__utils_8py" startline="93" endline="107">penify_hook.ui_utils.format_file_path</references>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a4f4dffbc432fac3e259d957dd1e187f1" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.file_analyzer.FileAnalyzerGenHook.run</definition>
+        <argsstring>(self)</argsstring>
+        <name>run</name>
+        <qualifiedname>penify_hook.file_analyzer.FileAnalyzerGenHook.run</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Runs the documentation process with a progress bar.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/file_analyzer.py" line="101" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/file_analyzer.py" bodystart="101" bodyend="144"/>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a3da02cd1140179a9ce60f62c85fccfef" compoundref="ui__utils_8py" startline="209" endline="232">penify_hook.ui_utils.create_stage_progress_bar</references>
+        <references refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a9b03b88a9ce1b9af945279375048dc32" compoundref="file__analyzer_8py" startline="22">penify_hook.file_analyzer.FileAnalyzerGenHook.file_path</references>
+        <references refid="namespacepenify__hook_1_1ui__utils_1aa6e684c00e26199440137a87ed9b195c" compoundref="ui__utils_8py" startline="169" endline="189">penify_hook.ui_utils.print_status</references>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a2b16aa6b68a9edea5f29f84f1c4be79a" compoundref="ui__utils_8py" startline="120" endline="131">penify_hook.ui_utils.print_success</references>
+        <references refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a05313caa22b173ce75638f0db08eeb85" compoundref="git__analyzer_8py" startline="91" endline="151">penify_hook.git_analyzer.GitDocGenHook.process_file</references>
+        <references refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a2cc6c22ef588fccf3eed9bbc57fb6d6e" compoundref="file__analyzer_8py" startline="27" endline="95">penify_hook.file_analyzer.FileAnalyzerGenHook.process_file</references>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a5a7340d0fc60fb80f17514d60bf45f1d" compoundref="ui__utils_8py" startline="233" endline="249">penify_hook.ui_utils.update_stage</references>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <inheritancegraph>
+      <node id="1">
+        <label>penify_hook.file_analyzer.FileAnalyzerGenHook</label>
+        <link refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook"/>
+        <childnode refid="2" relation="public-inheritance">
+        </childnode>
+      </node>
+      <node id="2">
+        <label>penify_hook.base_analyzer.BaseAnalyzer</label>
+        <link refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"/>
+      </node>
+    </inheritancegraph>
+    <collaborationgraph>
+      <node id="1">
+        <label>penify_hook.file_analyzer.FileAnalyzerGenHook</label>
+        <link refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook"/>
+        <childnode refid="2" relation="public-inheritance">
+        </childnode>
+      </node>
+      <node id="2">
+        <label>penify_hook.base_analyzer.BaseAnalyzer</label>
+        <link refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"/>
+      </node>
+    </collaborationgraph>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/file_analyzer.py" line="20" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/file_analyzer.py" bodystart="20" bodyend="144"/>
+    <listofallmembers>
+      <member refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a190c473090b2a07e7cb43073a3211c4b" prot="public" virt="non-virtual"><scope>penify_hook::file_analyzer::FileAnalyzerGenHook</scope><name>__init__</name></member>
+      <member refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a9b03b88a9ce1b9af945279375048dc32" prot="public" virt="non-virtual"><scope>penify_hook::file_analyzer::FileAnalyzerGenHook</scope><name>file_path</name></member>
+      <member refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a6ab39391dfb7686f2a2d21a702dd3073" prot="public" virt="non-virtual"><scope>penify_hook::file_analyzer::FileAnalyzerGenHook</scope><name>print_processing</name></member>
+      <member refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a2cc6c22ef588fccf3eed9bbc57fb6d6e" prot="public" virt="non-virtual"><scope>penify_hook::file_analyzer::FileAnalyzerGenHook</scope><name>process_file</name></member>
+      <member refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a4f4dffbc432fac3e259d957dd1e187f1" prot="public" virt="non-virtual"><scope>penify_hook::file_analyzer::FileAnalyzerGenHook</scope><name>run</name></member>
+    </listofallmembers>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook.xml b/docs345/xml/classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook.xml
new file mode 100644
index 0000000..a19eb53
--- /dev/null
+++ b/docs345/xml/classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook.xml
@@ -0,0 +1,158 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook" kind="class" language="Python" prot="public">
+    <compoundname>penify_hook::folder_analyzer::FolderAnalyzerGenHook</compoundname>
+    <basecompoundref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer" prot="public" virt="non-virtual">penify_hook.base_analyzer.BaseAnalyzer</basecompoundref>
+      <sectiondef kind="public-attrib">
+      <memberdef kind="variable" id="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a53f73d69cc0f00763ee4830e4f0f7393" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook.folder_analyzer.FolderAnalyzerGenHook::dir_path</definition>
+        <argsstring></argsstring>
+        <name>dir_path</name>
+        <qualifiedname>penify_hook.folder_analyzer.FolderAnalyzerGenHook.dir_path</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/folder_analyzer.py" line="11" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/folder_analyzer.py" bodystart="11" bodyend="-1"/>
+        <referencedby refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1afd189d1b8c773bf710a899eb21fd76cc" compoundref="folder__analyzer_8py" startline="40" endline="67">penify_hook.folder_analyzer.FolderAnalyzerGenHook.run</referencedby>
+      </memberdef>
+      </sectiondef>
+      <sectiondef kind="public-func">
+      <memberdef kind="function" id="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a1bb0358140931d82c7616f12efe31821" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.folder_analyzer.FolderAnalyzerGenHook.__init__</definition>
+        <argsstring>(self, str dir_path, APIClient api_client)</argsstring>
+        <name>__init__</name>
+        <qualifiedname>penify_hook.folder_analyzer.FolderAnalyzerGenHook.__init__</qualifiedname>
+        <reimplements refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1ab1296a3d1e9070d891801876b66f7344">__init__</reimplements>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>dir_path</declname>
+        </param>
+        <param>
+          <type><ref refid="classpenify__hook_1_1api__client_1_1APIClient" kindref="compound">APIClient</ref></type>
+          <declname>api_client</declname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/folder_analyzer.py" line="10" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/folder_analyzer.py" bodystart="10" bodyend="13"/>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a70b845318fc7ac3b607daf26378e19ec" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.folder_analyzer.FolderAnalyzerGenHook.list_all_files_in_dir</definition>
+        <argsstring>(self, str dir_path)</argsstring>
+        <name>list_all_files_in_dir</name>
+        <qualifiedname>penify_hook.folder_analyzer.FolderAnalyzerGenHook.list_all_files_in_dir</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>dir_path</declname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>List all non-hidden files in a directory and its subdirectories.
+
+This function recursively traverses the specified directory and its
+subdirectories, collecting paths of all non-hidden files. It filters out
+hidden directories and files (those starting with a dot) to ensure only
+visible files are returned.
+
+Args:
+    dir_path (str): The path to the directory whose files and subdirectory files need to be
+        listed.
+
+Returns:
+    list: A list containing the full paths of all non-hidden files within the
+        specified directory and its subdirectories.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/folder_analyzer.py" line="14" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/folder_analyzer.py" bodystart="14" bodyend="39"/>
+        <referencedby refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1afd189d1b8c773bf710a899eb21fd76cc" compoundref="folder__analyzer_8py" startline="40" endline="67">penify_hook.folder_analyzer.FolderAnalyzerGenHook.run</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1afd189d1b8c773bf710a899eb21fd76cc" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.folder_analyzer.FolderAnalyzerGenHook.run</definition>
+        <argsstring>(self)</argsstring>
+        <name>run</name>
+        <qualifiedname>penify_hook.folder_analyzer.FolderAnalyzerGenHook.run</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Run the post-commit hook.
+
+This function processes all files in a specified directory using a
+progress bar. It lists all files, initializes a `FileAnalyzerGenHook`
+for each file, and runs it. Errors during processing of individual files
+are caught and logged, but do not stop the processing of other files. A
+progress bar is displayed indicating the number of files processed.
+
+Args:
+    self (PostCommitHook): The instance of the post-commit hook class.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/folder_analyzer.py" line="40" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/folder_analyzer.py" bodystart="40" bodyend="67"/>
+        <references refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a81e9c55709205aaf4ebbe2b41683baf2" compoundref="base__analyzer_8py" startline="19">penify_hook.base_analyzer.BaseAnalyzer.api_client</references>
+        <references refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a53f73d69cc0f00763ee4830e4f0f7393" compoundref="folder__analyzer_8py" startline="11">penify_hook.folder_analyzer.FolderAnalyzerGenHook.dir_path</references>
+        <references refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a70b845318fc7ac3b607daf26378e19ec" compoundref="folder__analyzer_8py" startline="14" endline="39">penify_hook.folder_analyzer.FolderAnalyzerGenHook.list_all_files_in_dir</references>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <inheritancegraph>
+      <node id="1">
+        <label>penify_hook.folder_analyzer.FolderAnalyzerGenHook</label>
+        <link refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook"/>
+        <childnode refid="2" relation="public-inheritance">
+        </childnode>
+      </node>
+      <node id="2">
+        <label>penify_hook.base_analyzer.BaseAnalyzer</label>
+        <link refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"/>
+      </node>
+    </inheritancegraph>
+    <collaborationgraph>
+      <node id="1">
+        <label>penify_hook.folder_analyzer.FolderAnalyzerGenHook</label>
+        <link refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook"/>
+        <childnode refid="2" relation="public-inheritance">
+        </childnode>
+      </node>
+      <node id="2">
+        <label>penify_hook.base_analyzer.BaseAnalyzer</label>
+        <link refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"/>
+      </node>
+    </collaborationgraph>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/folder_analyzer.py" line="9" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/folder_analyzer.py" bodystart="9" bodyend="67"/>
+    <listofallmembers>
+      <member refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a1bb0358140931d82c7616f12efe31821" prot="public" virt="non-virtual"><scope>penify_hook::folder_analyzer::FolderAnalyzerGenHook</scope><name>__init__</name></member>
+      <member refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a53f73d69cc0f00763ee4830e4f0f7393" prot="public" virt="non-virtual"><scope>penify_hook::folder_analyzer::FolderAnalyzerGenHook</scope><name>dir_path</name></member>
+      <member refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a70b845318fc7ac3b607daf26378e19ec" prot="public" virt="non-virtual"><scope>penify_hook::folder_analyzer::FolderAnalyzerGenHook</scope><name>list_all_files_in_dir</name></member>
+      <member refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1afd189d1b8c773bf710a899eb21fd76cc" prot="public" virt="non-virtual"><scope>penify_hook::folder_analyzer::FolderAnalyzerGenHook</scope><name>run</name></member>
+    </listofallmembers>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/classpenify__hook_1_1git__analyzer_1_1GitDocGenHook.xml b/docs345/xml/classpenify__hook_1_1git__analyzer_1_1GitDocGenHook.xml
new file mode 100644
index 0000000..0cc4d5a
--- /dev/null
+++ b/docs345/xml/classpenify__hook_1_1git__analyzer_1_1GitDocGenHook.xml
@@ -0,0 +1,228 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook" kind="class" language="Python" prot="public">
+    <compoundname>penify_hook::git_analyzer::GitDocGenHook</compoundname>
+    <basecompoundref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer" prot="public" virt="non-virtual">penify_hook.base_analyzer.BaseAnalyzer</basecompoundref>
+      <sectiondef kind="public-func">
+      <memberdef kind="function" id="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a92275fddb43dbef6dfdb6c1ed6e96d0c" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.git_analyzer.GitDocGenHook.__init__</definition>
+        <argsstring>(self, str repo_path, APIClient api_client)</argsstring>
+        <name>__init__</name>
+        <qualifiedname>penify_hook.git_analyzer.GitDocGenHook.__init__</qualifiedname>
+        <reimplements refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1ab1296a3d1e9070d891801876b66f7344">__init__</reimplements>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>repo_path</declname>
+        </param>
+        <param>
+          <type><ref refid="classpenify__hook_1_1api__client_1_1APIClient" kindref="compound">APIClient</ref></type>
+          <declname>api_client</declname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/git_analyzer.py" line="20" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/git_analyzer.py" bodystart="20" bodyend="22"/>
+        <references refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a92275fddb43dbef6dfdb6c1ed6e96d0c" compoundref="git__analyzer_8py" startline="20" endline="22">penify_hook.git_analyzer.GitDocGenHook.__init__</references>
+        <referencedby refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a92275fddb43dbef6dfdb6c1ed6e96d0c" compoundref="git__analyzer_8py" startline="20" endline="22">penify_hook.git_analyzer.GitDocGenHook.__init__</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a17549766100e91eb94b5f1a1d34bf481" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.git_analyzer.GitDocGenHook.get_modified_files_in_last_commit</definition>
+        <argsstring>(self)</argsstring>
+        <name>get_modified_files_in_last_commit</name>
+        <qualifiedname>penify_hook.git_analyzer.GitDocGenHook.get_modified_files_in_last_commit</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Get the list of files modified in the last commit.
+
+This function retrieves the files that were modified in the most recent
+commit of the repository. It accesses the last commit and iterates
+through the differences to compile a list of unique file paths that were
+changed. The function returns this list for further processing or
+analysis.
+
+Returns:
+    list: A list of file paths that were modified in the last commit.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/git_analyzer.py" line="23" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/git_analyzer.py" bodystart="23" bodyend="41"/>
+        <references refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a3a9ddfa1dfba81fe21214fe486389369" compoundref="base__analyzer_8py" startline="12">penify_hook.base_analyzer.BaseAnalyzer.repo</references>
+        <referencedby refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a3beba14e92d717391a74bb70b1fab0ae" compoundref="git__analyzer_8py" startline="152" endline="197">penify_hook.git_analyzer.GitDocGenHook.run</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a974d2f51315ed6a1965a7fd7e2ced0cd" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.git_analyzer.GitDocGenHook.get_modified_lines</definition>
+        <argsstring>(self, diff_text)</argsstring>
+        <name>get_modified_lines</name>
+        <qualifiedname>penify_hook.git_analyzer.GitDocGenHook.get_modified_lines</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>diff_text</type>
+          <defname>diff_text</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Extract modified line numbers from a diff text.
+
+This function processes a diff text to identify and extract the line
+numbers that have been modified. It distinguishes between added and
+deleted lines and keeps track of the current line number as it parses
+through the diff. The function handles hunk headers and ensures that any
+deletions at the end of the file are also captured.
+
+Args:
+    diff_text (str): A string containing the diff text to be processed.
+
+Returns:
+    list: A sorted list of unique line numbers that have been modified.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/git_analyzer.py" line="42" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/git_analyzer.py" bodystart="42" bodyend="90"/>
+        <referencedby refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a05313caa22b173ce75638f0db08eeb85" compoundref="git__analyzer_8py" startline="91" endline="151">penify_hook.git_analyzer.GitDocGenHook.process_file</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a05313caa22b173ce75638f0db08eeb85" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.git_analyzer.GitDocGenHook.process_file</definition>
+        <argsstring>(self, file_path)</argsstring>
+        <name>process_file</name>
+        <qualifiedname>penify_hook.git_analyzer.GitDocGenHook.process_file</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>file_path</type>
+          <defname>file_path</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Process a file by checking its type, reading its content, and sending it
+to an API.
+
+This method constructs the absolute path of the specified file and
+verifies if the file has a valid extension. If the file type is
+supported, it reads the content of the file and retrieves the
+differences from the last commit in the repository. If changes are
+detected, it sends the file content along with the modified lines to an
+API for further processing. If the API response indicates no changes,
+the original file will not be overwritten.
+
+Args:
+    file_path (str): The relative path to the file to be processed.
+
+Returns:
+    bool: True if the file was successfully processed and updated, False
+        otherwise.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/git_analyzer.py" line="91" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/git_analyzer.py" bodystart="91" bodyend="151"/>
+        <references refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a81e9c55709205aaf4ebbe2b41683baf2" compoundref="base__analyzer_8py" startline="19">penify_hook.base_analyzer.BaseAnalyzer.api_client</references>
+        <references refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a974d2f51315ed6a1965a7fd7e2ced0cd" compoundref="git__analyzer_8py" startline="42" endline="90">penify_hook.git_analyzer.GitDocGenHook.get_modified_lines</references>
+        <references refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a3a9ddfa1dfba81fe21214fe486389369" compoundref="base__analyzer_8py" startline="12">penify_hook.base_analyzer.BaseAnalyzer.repo</references>
+        <references refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a9cca3465b0cc00d78324b0a9eac1d7f5" compoundref="base__analyzer_8py" startline="13">penify_hook.base_analyzer.BaseAnalyzer.repo_details</references>
+        <references refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a957e81a1ab561f6cecfbe999e7b85499" compoundref="base__analyzer_8py" startline="11">penify_hook.base_analyzer.BaseAnalyzer.repo_path</references>
+        <references refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a0cac0310ec635aa64a34857cf30ce1eb" compoundref="base__analyzer_8py" startline="20">penify_hook.base_analyzer.BaseAnalyzer.supported_file_types</references>
+        <referencedby refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a4f4dffbc432fac3e259d957dd1e187f1" compoundref="file__analyzer_8py" startline="101" endline="144">penify_hook.file_analyzer.FileAnalyzerGenHook.run</referencedby>
+        <referencedby refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a3beba14e92d717391a74bb70b1fab0ae" compoundref="git__analyzer_8py" startline="152" endline="197">penify_hook.git_analyzer.GitDocGenHook.run</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a3beba14e92d717391a74bb70b1fab0ae" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.git_analyzer.GitDocGenHook.run</definition>
+        <argsstring>(self)</argsstring>
+        <name>run</name>
+        <qualifiedname>penify_hook.git_analyzer.GitDocGenHook.run</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Run the post-commit hook.
+
+This method retrieves the list of modified files from the last commit
+and processes each file. It stages any files that have been modified
+during processing and creates an auto-commit if changes were made. A
+progress bar is displayed to indicate the processing status of each
+file. The method handles any exceptions that occur during file
+processing, printing an error message for each file that fails to
+process. If any modifications are made to the files, an auto-commit is
+created to save those changes.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/git_analyzer.py" line="152" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/git_analyzer.py" bodystart="152" bodyend="197"/>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a12b92532b1458af94f3649d411b5505c" compoundref="ui__utils_8py" startline="190" endline="208">penify_hook.ui_utils.create_progress_bar</references>
+        <references refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a17549766100e91eb94b5f1a1d34bf481" compoundref="git__analyzer_8py" startline="23" endline="41">penify_hook.git_analyzer.GitDocGenHook.get_modified_files_in_last_commit</references>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" compoundref="ui__utils_8py" startline="108" endline="119">penify_hook.ui_utils.print_info</references>
+        <references refid="namespacepenify__hook_1_1ui__utils_1adfcbbfe39029ab6d1dd33e7bf75ae115" compoundref="ui__utils_8py" startline="156" endline="168">penify_hook.ui_utils.print_processing</references>
+        <references refid="namespacepenify__hook_1_1ui__utils_1aa6e684c00e26199440137a87ed9b195c" compoundref="ui__utils_8py" startline="169" endline="189">penify_hook.ui_utils.print_status</references>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a2b16aa6b68a9edea5f29f84f1c4be79a" compoundref="ui__utils_8py" startline="120" endline="131">penify_hook.ui_utils.print_success</references>
+        <references refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a05313caa22b173ce75638f0db08eeb85" compoundref="git__analyzer_8py" startline="91" endline="151">penify_hook.git_analyzer.GitDocGenHook.process_file</references>
+        <references refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a2cc6c22ef588fccf3eed9bbc57fb6d6e" compoundref="file__analyzer_8py" startline="27" endline="95">penify_hook.file_analyzer.FileAnalyzerGenHook.process_file</references>
+        <references refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a3a9ddfa1dfba81fe21214fe486389369" compoundref="base__analyzer_8py" startline="12">penify_hook.base_analyzer.BaseAnalyzer.repo</references>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <inheritancegraph>
+      <node id="1">
+        <label>penify_hook.git_analyzer.GitDocGenHook</label>
+        <link refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook"/>
+        <childnode refid="2" relation="public-inheritance">
+        </childnode>
+      </node>
+      <node id="2">
+        <label>penify_hook.base_analyzer.BaseAnalyzer</label>
+        <link refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"/>
+      </node>
+    </inheritancegraph>
+    <collaborationgraph>
+      <node id="1">
+        <label>penify_hook.git_analyzer.GitDocGenHook</label>
+        <link refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook"/>
+        <childnode refid="2" relation="public-inheritance">
+        </childnode>
+      </node>
+      <node id="2">
+        <label>penify_hook.base_analyzer.BaseAnalyzer</label>
+        <link refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"/>
+      </node>
+    </collaborationgraph>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/git_analyzer.py" line="19" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/git_analyzer.py" bodystart="19" bodyend="197"/>
+    <listofallmembers>
+      <member refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a92275fddb43dbef6dfdb6c1ed6e96d0c" prot="public" virt="non-virtual"><scope>penify_hook::git_analyzer::GitDocGenHook</scope><name>__init__</name></member>
+      <member refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a17549766100e91eb94b5f1a1d34bf481" prot="public" virt="non-virtual"><scope>penify_hook::git_analyzer::GitDocGenHook</scope><name>get_modified_files_in_last_commit</name></member>
+      <member refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a974d2f51315ed6a1965a7fd7e2ced0cd" prot="public" virt="non-virtual"><scope>penify_hook::git_analyzer::GitDocGenHook</scope><name>get_modified_lines</name></member>
+      <member refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a05313caa22b173ce75638f0db08eeb85" prot="public" virt="non-virtual"><scope>penify_hook::git_analyzer::GitDocGenHook</scope><name>process_file</name></member>
+      <member refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a3beba14e92d717391a74bb70b1fab0ae" prot="public" virt="non-virtual"><scope>penify_hook::git_analyzer::GitDocGenHook</scope><name>run</name></member>
+    </listofallmembers>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/classpenify__hook_1_1jira__client_1_1JiraClient.xml b/docs345/xml/classpenify__hook_1_1jira__client_1_1JiraClient.xml
new file mode 100644
index 0000000..04a4435
--- /dev/null
+++ b/docs345/xml/classpenify__hook_1_1jira__client_1_1JiraClient.xml
@@ -0,0 +1,559 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="classpenify__hook_1_1jira__client_1_1JiraClient" kind="class" language="Python" prot="public">
+    <compoundname>penify_hook::jira_client::JiraClient</compoundname>
+      <sectiondef kind="public-attrib">
+      <memberdef kind="variable" id="classpenify__hook_1_1jira__client_1_1JiraClient_1a3c0cfecff02a75cb7001509a595b8197" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook.jira_client.JiraClient::jira_url</definition>
+        <argsstring></argsstring>
+        <name>jira_url</name>
+        <qualifiedname>penify_hook.jira_client.JiraClient.jira_url</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" line="26" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" bodystart="26" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="classpenify__hook_1_1jira__client_1_1JiraClient_1ae56104d5aa7bda7bb26d169c4b46038c" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook.jira_client.JiraClient::jira_user</definition>
+        <argsstring></argsstring>
+        <name>jira_user</name>
+        <qualifiedname>penify_hook.jira_client.JiraClient.jira_user</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" line="27" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" bodystart="27" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="classpenify__hook_1_1jira__client_1_1JiraClient_1afc5c90e53b702f9fc27e2ee7d3f991b9" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook.jira_client.JiraClient::jira_api_token</definition>
+        <argsstring></argsstring>
+        <name>jira_api_token</name>
+        <qualifiedname>penify_hook.jira_client.JiraClient.jira_api_token</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" line="28" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" bodystart="28" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook.jira_client.JiraClient::jira_client</definition>
+        <argsstring></argsstring>
+        <name>jira_client</name>
+        <qualifiedname>penify_hook.jira_client.JiraClient.jira_client</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" line="29" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" bodystart="29" bodyend="-1"/>
+        <referencedby refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aa1f374116c64cd5f1492ec7f7e40f9c1" compoundref="jira__client_8py" startline="145" endline="166">penify_hook.jira_client.JiraClient.add_comment</referencedby>
+        <referencedby refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aa967169a4b7970c67c0947b9ac56f746" compoundref="jira__client_8py" startline="254" endline="337">penify_hook.jira_client.JiraClient.get_detailed_issue_context</referencedby>
+        <referencedby refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a65f6924819084b7c8d268956a784804a" compoundref="jira__client_8py" startline="104" endline="144">penify_hook.jira_client.JiraClient.get_issue_details</referencedby>
+        <referencedby refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a8496194276441fa2eb2fa014eaab9a37" compoundref="commit__analyzer_8py" startline="21" endline="72">penify_hook.commit_analyzer.CommitDocGenHook.get_summary</referencedby>
+        <referencedby refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a00d0f9ae006313a21576362d26ac5ec8" compoundref="jira__client_8py" startline="46" endline="57">penify_hook.jira_client.JiraClient.is_connected</referencedby>
+        <referencedby refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1adda13cc121d96342476ccf72b63a007f" compoundref="commit__analyzer_8py" startline="113" endline="161">penify_hook.commit_analyzer.CommitDocGenHook.process_jira_integration</referencedby>
+        <referencedby refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a6370a03f7ed9175ef6f81e931a105ea9" compoundref="commit__analyzer_8py" startline="73" endline="112">penify_hook.commit_analyzer.CommitDocGenHook.run</referencedby>
+        <referencedby refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aca8837552d37bfd611de23441a240826" compoundref="jira__client_8py" startline="167" endline="203">penify_hook.jira_client.JiraClient.update_issue_status</referencedby>
+      </memberdef>
+      </sectiondef>
+      <sectiondef kind="public-func">
+      <memberdef kind="function" id="classpenify__hook_1_1jira__client_1_1JiraClient_1a47efc1ec07389c960f2dfb37ba8c09f5" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.jira_client.JiraClient.__init__</definition>
+        <argsstring>(self, str jira_url=None, str jira_user=None, str jira_api_token=None)</argsstring>
+        <name>__init__</name>
+        <qualifiedname>penify_hook.jira_client.JiraClient.__init__</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>jira_url</declname>
+          <defval>None</defval>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>jira_user</declname>
+          <defval>None</defval>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>jira_api_token</declname>
+          <defval>None</defval>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Initialize the JIRA client.
+
+Args:
+    jira_url: Base URL for JIRA instance (e.g., &quot;https://your-domain.atlassian.net&quot;)
+    jira_user: JIRA username or email
+    jira_api_token: JIRA API token
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" line="17" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" bodystart="17" bodyend="45"/>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1jira__client_1_1JiraClient_1a00d0f9ae006313a21576362d26ac5ec8" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>bool</type>
+        <definition> bool penify_hook.jira_client.JiraClient.is_connected</definition>
+        <argsstring>(self)</argsstring>
+        <name>is_connected</name>
+        <qualifiedname>penify_hook.jira_client.JiraClient.is_connected</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Check if the JIRA client is connected.
+
+This function verifies whether the JIRA client has successfully
+established a connection. It returns `True` if the client is connected,
+and `False` otherwise.
+
+Returns:
+    bool: True if the JIRA client is connected, False otherwise
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" line="46" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" bodystart="46" bodyend="57"/>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6" compoundref="jira__client_8py" startline="29">penify_hook.jira_client.JiraClient.jira_client</references>
+        <referencedby refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aa1f374116c64cd5f1492ec7f7e40f9c1" compoundref="jira__client_8py" startline="145" endline="166">penify_hook.jira_client.JiraClient.add_comment</referencedby>
+        <referencedby refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a70d2c5a6432aa6f238da0ff65d49a760" compoundref="jira__client_8py" startline="377" endline="457">penify_hook.jira_client.JiraClient.enhance_commit_message</referencedby>
+        <referencedby refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a49ea1149758f7f5212149d357b13cc23" compoundref="jira__client_8py" startline="204" endline="253">penify_hook.jira_client.JiraClient.format_commit_message_with_jira_info</referencedby>
+        <referencedby refid="classpenify__hook_1_1jira__client_1_1JiraClient_1afb41ce6f13c30b1265d439ddf04bf2cd" compoundref="jira__client_8py" startline="338" endline="376">penify_hook.jira_client.JiraClient.get_commit_context_from_issues</referencedby>
+        <referencedby refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aa967169a4b7970c67c0947b9ac56f746" compoundref="jira__client_8py" startline="254" endline="337">penify_hook.jira_client.JiraClient.get_detailed_issue_context</referencedby>
+        <referencedby refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a65f6924819084b7c8d268956a784804a" compoundref="jira__client_8py" startline="104" endline="144">penify_hook.jira_client.JiraClient.get_issue_details</referencedby>
+        <referencedby refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aca8837552d37bfd611de23441a240826" compoundref="jira__client_8py" startline="167" endline="203">penify_hook.jira_client.JiraClient.update_issue_status</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1jira__client_1_1JiraClient_1a093d6456fe053ef7a7862d5d6851910c" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>List[str]</type>
+        <definition> List[str] penify_hook.jira_client.JiraClient.extract_issue_keys_from_branch</definition>
+        <argsstring>(self, str branch_name)</argsstring>
+        <name>extract_issue_keys_from_branch</name>
+        <qualifiedname>penify_hook.jira_client.JiraClient.extract_issue_keys_from_branch</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>branch_name</declname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Extracts JIRA issue keys from a branch name.
+
+This function searches through a given git branch name to find and
+return any JIRA issue keys that match the pattern. Common conventions
+for JIRA issue keys in branch names include: -
+feature/PROJECT-123-description - bugfix/PROJECT-123-fix-something -
+hotfix/PROJECT-123/short-desc
+
+Args:
+    branch_name (str): The name of the git branch to search for JIRA issue keys.
+
+Returns:
+    List[str]: A list of unique JIRA issue keys found in the branch name.
+
+Examples:
+    extract_issue_keys_from_branch(&quot;feature/PROJ-456-add-new-feature&quot;)
+    # Output: [&apos;PROJ-456&apos;]
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" line="58" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" bodystart="58" bodyend="83"/>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a093d6456fe053ef7a7862d5d6851910c" compoundref="jira__client_8py" startline="58" endline="83">penify_hook.jira_client.JiraClient.extract_issue_keys_from_branch</references>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" compoundref="ui__utils_8py" startline="108" endline="119">penify_hook.ui_utils.print_info</references>
+        <referencedby refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a093d6456fe053ef7a7862d5d6851910c" compoundref="jira__client_8py" startline="58" endline="83">penify_hook.jira_client.JiraClient.extract_issue_keys_from_branch</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1jira__client_1_1JiraClient_1ad2823ad1d3baaedd38039913c3a97fd7" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>List[str]</type>
+        <definition> List[str] penify_hook.jira_client.JiraClient.extract_issue_keys</definition>
+        <argsstring>(self, str text)</argsstring>
+        <name>extract_issue_keys</name>
+        <qualifiedname>penify_hook.jira_client.JiraClient.extract_issue_keys</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>text</declname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Extract JIRA issue keys from a given text.
+
+This function searches through the provided text to find and return all
+unique JIRA issue keys. A JIRA issue key typically follows the pattern
+of PROJECT-123, where PROJECT is alphanumeric and consists of at least
+one uppercase letter followed by one or more alphanumeric characters,
+and 123 is a numeric sequence.
+
+Args:
+    text (str): The text in which to search for JIRA issue keys.
+
+Returns:
+    List[str]: A list of unique JIRA issue keys found in the text.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" line="84" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" bodystart="84" bodyend="103"/>
+        <referencedby refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a49ea1149758f7f5212149d357b13cc23" compoundref="jira__client_8py" startline="204" endline="253">penify_hook.jira_client.JiraClient.format_commit_message_with_jira_info</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1jira__client_1_1JiraClient_1a65f6924819084b7c8d268956a784804a" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>Optional[Dict[str, Any]]</type>
+        <definition> Optional[Dict[str, Any]] penify_hook.jira_client.JiraClient.get_issue_details</definition>
+        <argsstring>(self, str issue_key)</argsstring>
+        <name>get_issue_details</name>
+        <qualifiedname>penify_hook.jira_client.JiraClient.get_issue_details</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>issue_key</declname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Retrieve details of a JIRA issue based on its key.
+
+This function fetches detailed information about a specified JIRA issue
+using the provided issue key. It checks if the JIRA client is connected
+before attempting to retrieve the issue. If the client is not connected,
+it logs a warning and returns `None`. The function then attempts to
+fetch the issue from the JIRA server and constructs a dictionary
+containing various details about the issue such as its key, summary,
+status, description, assignee, reporter, type, priority, and URL. If any
+errors occur during this process, they are logged, and `None` is
+returned.
+
+Args:
+    issue_key (str): The JIRA issue key (e.g., &quot;PROJECT-123&quot;).
+
+Returns:
+    Dict[str, Any] or None: A dictionary containing the details of the JIRA
+        issue if found, otherwise `None`.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" line="104" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" bodystart="104" bodyend="144"/>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a00d0f9ae006313a21576362d26ac5ec8" compoundref="jira__client_8py" startline="46" endline="57">penify_hook.jira_client.JiraClient.is_connected</references>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6" compoundref="jira__client_8py" startline="29">penify_hook.jira_client.JiraClient.jira_client</references>
+        <referencedby refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a49ea1149758f7f5212149d357b13cc23" compoundref="jira__client_8py" startline="204" endline="253">penify_hook.jira_client.JiraClient.format_commit_message_with_jira_info</referencedby>
+        <referencedby refid="classpenify__hook_1_1jira__client_1_1JiraClient_1afb41ce6f13c30b1265d439ddf04bf2cd" compoundref="jira__client_8py" startline="338" endline="376">penify_hook.jira_client.JiraClient.get_commit_context_from_issues</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1jira__client_1_1JiraClient_1aa1f374116c64cd5f1492ec7f7e40f9c1" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>bool</type>
+        <definition> bool penify_hook.jira_client.JiraClient.add_comment</definition>
+        <argsstring>(self, str issue_key, str comment)</argsstring>
+        <name>add_comment</name>
+        <qualifiedname>penify_hook.jira_client.JiraClient.add_comment</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>issue_key</declname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>comment</declname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Add a comment to a JIRA issue.
+
+Args:
+    issue_key (str): JIRA issue key (e.g., &quot;PROJECT-123&quot;)
+    comment (str): Comment text to add
+
+Returns:
+    bool: True if the comment was added successfully, False otherwise
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" line="145" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" bodystart="145" bodyend="166"/>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aa1f374116c64cd5f1492ec7f7e40f9c1" compoundref="jira__client_8py" startline="145" endline="166">penify_hook.jira_client.JiraClient.add_comment</references>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a00d0f9ae006313a21576362d26ac5ec8" compoundref="jira__client_8py" startline="46" endline="57">penify_hook.jira_client.JiraClient.is_connected</references>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6" compoundref="jira__client_8py" startline="29">penify_hook.jira_client.JiraClient.jira_client</references>
+        <referencedby refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aa1f374116c64cd5f1492ec7f7e40f9c1" compoundref="jira__client_8py" startline="145" endline="166">penify_hook.jira_client.JiraClient.add_comment</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1jira__client_1_1JiraClient_1aca8837552d37bfd611de23441a240826" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>bool</type>
+        <definition> bool penify_hook.jira_client.JiraClient.update_issue_status</definition>
+        <argsstring>(self, str issue_key, str transition_name)</argsstring>
+        <name>update_issue_status</name>
+        <qualifiedname>penify_hook.jira_client.JiraClient.update_issue_status</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>issue_key</declname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>transition_name</declname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Update the status of a JIRA issue.
+
+Args:
+    issue_key (str): The key of the JIRA issue to be updated.
+    transition_name (str): The name of the desired transition.
+
+Returns:
+    bool: True if the status was successfully updated, False otherwise.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" line="167" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" bodystart="167" bodyend="203"/>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a00d0f9ae006313a21576362d26ac5ec8" compoundref="jira__client_8py" startline="46" endline="57">penify_hook.jira_client.JiraClient.is_connected</references>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6" compoundref="jira__client_8py" startline="29">penify_hook.jira_client.JiraClient.jira_client</references>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1jira__client_1_1JiraClient_1a49ea1149758f7f5212149d357b13cc23" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>tuple</type>
+        <definition> tuple penify_hook.jira_client.JiraClient.format_commit_message_with_jira_info</definition>
+        <argsstring>(self, str commit_title, str commit_description, List[str] issue_keys=None)</argsstring>
+        <name>format_commit_message_with_jira_info</name>
+        <qualifiedname>penify_hook.jira_client.JiraClient.format_commit_message_with_jira_info</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>commit_title</declname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>commit_description</declname>
+        </param>
+        <param>
+          <type>List</type>
+          <declname>issue_keys</declname>
+          <array>[str]</array>
+          <defval>None</defval>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Format commit message with JIRA issue information.
+
+Args:
+    commit_title (str): The original commit title.
+    commit_description (str): The original commit description.
+    issue_keys (List[str]?): A list of JIRA issue keys to include in the commit message. If not
+        provided, issue keys will be extracted from both the title and the
+        description.
+
+Returns:
+    tuple: A tuple containing the updated commit title and description with JIRA
+        information included.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" line="204" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" bodystart="204" bodyend="253"/>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1ad2823ad1d3baaedd38039913c3a97fd7" compoundref="jira__client_8py" startline="84" endline="103">penify_hook.jira_client.JiraClient.extract_issue_keys</references>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a65f6924819084b7c8d268956a784804a" compoundref="jira__client_8py" startline="104" endline="144">penify_hook.jira_client.JiraClient.get_issue_details</references>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a00d0f9ae006313a21576362d26ac5ec8" compoundref="jira__client_8py" startline="46" endline="57">penify_hook.jira_client.JiraClient.is_connected</references>
+        <referencedby refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a70d2c5a6432aa6f238da0ff65d49a760" compoundref="jira__client_8py" startline="377" endline="457">penify_hook.jira_client.JiraClient.enhance_commit_message</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1jira__client_1_1JiraClient_1aa967169a4b7970c67c0947b9ac56f746" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>Dict[str, Any]</type>
+        <definition> Dict[str, Any] penify_hook.jira_client.JiraClient.get_detailed_issue_context</definition>
+        <argsstring>(self, str issue_key)</argsstring>
+        <name>get_detailed_issue_context</name>
+        <qualifiedname>penify_hook.jira_client.JiraClient.get_detailed_issue_context</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>issue_key</declname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Retrieve comprehensive details about a JIRA issue including context for
+better commit messages.
+
+This function fetches detailed information from a specified JIRA issue
+and constructs a dictionary containing various context fields such as
+the issue summary, description, type, status, priority, comments, URL,
+and additional custom fields like acceptance criteria and sprint
+information. If any errors occur during the fetching process,
+appropriate warnings or errors are logged.
+
+Args:
+    issue_key (str): The JIRA issue key (e.g., &quot;PROJECT-123&quot;).
+
+Returns:
+    Dict[str, Any]: A dictionary containing business and technical context from the issue.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" line="254" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" bodystart="254" bodyend="337"/>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a00d0f9ae006313a21576362d26ac5ec8" compoundref="jira__client_8py" startline="46" endline="57">penify_hook.jira_client.JiraClient.is_connected</references>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6" compoundref="jira__client_8py" startline="29">penify_hook.jira_client.JiraClient.jira_client</references>
+        <referencedby refid="classpenify__hook_1_1jira__client_1_1JiraClient_1afb41ce6f13c30b1265d439ddf04bf2cd" compoundref="jira__client_8py" startline="338" endline="376">penify_hook.jira_client.JiraClient.get_commit_context_from_issues</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1jira__client_1_1JiraClient_1afb41ce6f13c30b1265d439ddf04bf2cd" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>Dict[str, Any]</type>
+        <definition> Dict[str, Any] penify_hook.jira_client.JiraClient.get_commit_context_from_issues</definition>
+        <argsstring>(self, List[str] issue_keys)</argsstring>
+        <name>get_commit_context_from_issues</name>
+        <qualifiedname>penify_hook.jira_client.JiraClient.get_commit_context_from_issues</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>List</type>
+          <declname>issue_keys</declname>
+          <array>[str]</array>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Gather contextual information from JIRA issues to improve commit
+messages.
+
+This function processes a list of JIRA issue keys, retrieves detailed
+context for each issue, and aggregates it into a dictionary that can be
+used to enhance commit messages. It first retrieves the primary issue
+(the first key in the list) and then gathers basic details for any
+related issues. The resulting context includes information from both the
+primary and related issues, along with all issue keys.
+
+Args:
+    issue_keys: List of JIRA issue keys to gather information from
+
+Returns:
+    Dict containing business and technical context from the issues
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" line="338" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" bodystart="338" bodyend="376"/>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aa967169a4b7970c67c0947b9ac56f746" compoundref="jira__client_8py" startline="254" endline="337">penify_hook.jira_client.JiraClient.get_detailed_issue_context</references>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a65f6924819084b7c8d268956a784804a" compoundref="jira__client_8py" startline="104" endline="144">penify_hook.jira_client.JiraClient.get_issue_details</references>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a00d0f9ae006313a21576362d26ac5ec8" compoundref="jira__client_8py" startline="46" endline="57">penify_hook.jira_client.JiraClient.is_connected</references>
+        <referencedby refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a70d2c5a6432aa6f238da0ff65d49a760" compoundref="jira__client_8py" startline="377" endline="457">penify_hook.jira_client.JiraClient.enhance_commit_message</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1jira__client_1_1JiraClient_1a70d2c5a6432aa6f238da0ff65d49a760" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>tuple</type>
+        <definition> tuple penify_hook.jira_client.JiraClient.enhance_commit_message</definition>
+        <argsstring>(self, str title, str description, List[str] issue_keys)</argsstring>
+        <name>enhance_commit_message</name>
+        <qualifiedname>penify_hook.jira_client.JiraClient.enhance_commit_message</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>title</declname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>description</declname>
+        </param>
+        <param>
+          <type>List</type>
+          <declname>issue_keys</declname>
+          <array>[str]</array>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Enhance a commit message with business and technical context from JIRA
+issues.
+
+Args:
+    title (str): Original commit title.
+    description (str): Original commit description.
+    issue_keys (List[str]): List of JIRA issue keys to include in the enhanced commit message.
+
+Returns:
+    tuple: A tuple containing the enhanced commit title and description with added
+        context from JIRA issues.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" line="377" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" bodystart="377" bodyend="457"/>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a49ea1149758f7f5212149d357b13cc23" compoundref="jira__client_8py" startline="204" endline="253">penify_hook.jira_client.JiraClient.format_commit_message_with_jira_info</references>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1afb41ce6f13c30b1265d439ddf04bf2cd" compoundref="jira__client_8py" startline="338" endline="376">penify_hook.jira_client.JiraClient.get_commit_context_from_issues</references>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a00d0f9ae006313a21576362d26ac5ec8" compoundref="jira__client_8py" startline="46" endline="57">penify_hook.jira_client.JiraClient.is_connected</references>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+<para><verbatim>Client for interacting with JIRA API
+</verbatim> </para>
+    </detaileddescription>
+    <collaborationgraph>
+      <node id="1">
+        <label>penify_hook.jira_client.JiraClient</label>
+        <link refid="classpenify__hook_1_1jira__client_1_1JiraClient"/>
+      </node>
+    </collaborationgraph>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" line="12" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" bodystart="12" bodyend="457"/>
+    <listofallmembers>
+      <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a47efc1ec07389c960f2dfb37ba8c09f5" prot="public" virt="non-virtual"><scope>penify_hook::jira_client::JiraClient</scope><name>__init__</name></member>
+      <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aa1f374116c64cd5f1492ec7f7e40f9c1" prot="public" virt="non-virtual"><scope>penify_hook::jira_client::JiraClient</scope><name>add_comment</name></member>
+      <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a70d2c5a6432aa6f238da0ff65d49a760" prot="public" virt="non-virtual"><scope>penify_hook::jira_client::JiraClient</scope><name>enhance_commit_message</name></member>
+      <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1ad2823ad1d3baaedd38039913c3a97fd7" prot="public" virt="non-virtual"><scope>penify_hook::jira_client::JiraClient</scope><name>extract_issue_keys</name></member>
+      <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a093d6456fe053ef7a7862d5d6851910c" prot="public" virt="non-virtual"><scope>penify_hook::jira_client::JiraClient</scope><name>extract_issue_keys_from_branch</name></member>
+      <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a49ea1149758f7f5212149d357b13cc23" prot="public" virt="non-virtual"><scope>penify_hook::jira_client::JiraClient</scope><name>format_commit_message_with_jira_info</name></member>
+      <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1afb41ce6f13c30b1265d439ddf04bf2cd" prot="public" virt="non-virtual"><scope>penify_hook::jira_client::JiraClient</scope><name>get_commit_context_from_issues</name></member>
+      <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aa967169a4b7970c67c0947b9ac56f746" prot="public" virt="non-virtual"><scope>penify_hook::jira_client::JiraClient</scope><name>get_detailed_issue_context</name></member>
+      <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a65f6924819084b7c8d268956a784804a" prot="public" virt="non-virtual"><scope>penify_hook::jira_client::JiraClient</scope><name>get_issue_details</name></member>
+      <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a00d0f9ae006313a21576362d26ac5ec8" prot="public" virt="non-virtual"><scope>penify_hook::jira_client::JiraClient</scope><name>is_connected</name></member>
+      <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1afc5c90e53b702f9fc27e2ee7d3f991b9" prot="public" virt="non-virtual"><scope>penify_hook::jira_client::JiraClient</scope><name>jira_api_token</name></member>
+      <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6" prot="public" virt="non-virtual"><scope>penify_hook::jira_client::JiraClient</scope><name>jira_client</name></member>
+      <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a3c0cfecff02a75cb7001509a595b8197" prot="public" virt="non-virtual"><scope>penify_hook::jira_client::JiraClient</scope><name>jira_url</name></member>
+      <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1ae56104d5aa7bda7bb26d169c4b46038c" prot="public" virt="non-virtual"><scope>penify_hook::jira_client::JiraClient</scope><name>jira_user</name></member>
+      <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aca8837552d37bfd611de23441a240826" prot="public" virt="non-virtual"><scope>penify_hook::jira_client::JiraClient</scope><name>update_issue_status</name></member>
+    </listofallmembers>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/classpenify__hook_1_1llm__client_1_1LLMClient.xml b/docs345/xml/classpenify__hook_1_1llm__client_1_1LLMClient.xml
new file mode 100644
index 0000000..adeff2a
--- /dev/null
+++ b/docs345/xml/classpenify__hook_1_1llm__client_1_1LLMClient.xml
@@ -0,0 +1,190 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="classpenify__hook_1_1llm__client_1_1LLMClient" kind="class" language="Python" prot="public">
+    <compoundname>penify_hook::llm_client::LLMClient</compoundname>
+      <sectiondef kind="public-attrib">
+      <memberdef kind="variable" id="classpenify__hook_1_1llm__client_1_1LLMClient_1abc2cb6b1d6d9b5dc16401ca078ec8c10" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook.llm_client.LLMClient::model</definition>
+        <argsstring></argsstring>
+        <name>model</name>
+        <qualifiedname>penify_hook.llm_client.LLMClient.model</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/llm_client.py" line="25" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/llm_client.py" bodystart="25" bodyend="-1"/>
+        <referencedby refid="classpenify__hook_1_1llm__client_1_1LLMClient_1a2ad3014dac466ee1d8e00306d0cf2000" compoundref="llm__client_8py" startline="40" endline="177">penify_hook.llm_client.LLMClient.generate_commit_summary</referencedby>
+      </memberdef>
+      </sectiondef>
+      <sectiondef kind="private-attrib">
+      <memberdef kind="variable" id="classpenify__hook_1_1llm__client_1_1LLMClient_1a76c2e9805f805624ab9c55a9f1f8d362" prot="private" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook.llm_client.LLMClient::_litellm</definition>
+        <argsstring></argsstring>
+        <name>_litellm</name>
+        <qualifiedname>penify_hook.llm_client.LLMClient._litellm</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/llm_client.py" line="30" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/llm_client.py" bodystart="30" bodyend="-1"/>
+        <referencedby refid="classpenify__hook_1_1llm__client_1_1LLMClient_1ad6f06658ca922793f879474f2234518e" compoundref="llm__client_8py" startline="33" endline="39">penify_hook.llm_client.LLMClient.litellm</referencedby>
+      </memberdef>
+      </sectiondef>
+      <sectiondef kind="public-func">
+      <memberdef kind="function" id="classpenify__hook_1_1llm__client_1_1LLMClient_1a76d92354f585ab4bb291169f9f530764" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.llm_client.LLMClient.__init__</definition>
+        <argsstring>(self, str model=None, str api_base=None, str api_key=None)</argsstring>
+        <name>__init__</name>
+        <qualifiedname>penify_hook.llm_client.LLMClient.__init__</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>model</declname>
+          <defval>None</defval>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>api_base</declname>
+          <defval>None</defval>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>api_key</declname>
+          <defval>None</defval>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Initialize the LLM client.
+
+Args:
+    model: LLM model to use (e.g., &quot;gpt-4&quot;, &quot;ollama/llama2&quot;, etc.)
+    api_base: Base URL for API requests (e.g., &quot;http://localhost:11434&quot; for Ollama)
+    api_key: API key for the LLM service
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/llm_client.py" line="15" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/llm_client.py" bodystart="15" bodyend="31"/>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1llm__client_1_1LLMClient_1ad6f06658ca922793f879474f2234518e" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.llm_client.LLMClient.litellm</definition>
+        <argsstring>(self)</argsstring>
+        <name>litellm</name>
+        <qualifiedname>penify_hook.llm_client.LLMClient.litellm</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Lazy load litellm only when needed.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/llm_client.py" line="33" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/llm_client.py" bodystart="33" bodyend="39"/>
+        <references refid="classpenify__hook_1_1llm__client_1_1LLMClient_1a76c2e9805f805624ab9c55a9f1f8d362" compoundref="llm__client_8py" startline="30">penify_hook.llm_client.LLMClient._litellm</references>
+        <referencedby refid="classpenify__hook_1_1llm__client_1_1LLMClient_1a2ad3014dac466ee1d8e00306d0cf2000" compoundref="llm__client_8py" startline="40" endline="177">penify_hook.llm_client.LLMClient.generate_commit_summary</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1llm__client_1_1LLMClient_1a2ad3014dac466ee1d8e00306d0cf2000" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>Dict</type>
+        <definition> Dict penify_hook.llm_client.LLMClient.generate_commit_summary</definition>
+        <argsstring>(self, str diff, str message, bool generate_description, Dict repo_details, Dict jira_context=None)</argsstring>
+        <name>generate_commit_summary</name>
+        <qualifiedname>penify_hook.llm_client.LLMClient.generate_commit_summary</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>diff</declname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>message</declname>
+        </param>
+        <param>
+          <type>bool</type>
+          <declname>generate_description</declname>
+        </param>
+        <param>
+          <type>Dict</type>
+          <declname>repo_details</declname>
+        </param>
+        <param>
+          <type>Dict</type>
+          <declname>jira_context</declname>
+          <defval>None</defval>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Generate a commit summary using the LLM.
+
+This function generates a concise and descriptive commit summary based
+on the provided Git diff, user instructions, repository details, and
+optional JIRA context. It constructs a prompt for the LLM to produce a
+commit title and an optional detailed description, adhering to Semantic
+Commit Messages guidelines. If the JIRA context is provided, it enriches
+the prompt with relevant issue information.
+
+Args:
+    diff (str): Git diff of changes.
+    message (str): User-provided commit message or instructions.
+    generate_description (bool): Flag indicating whether to include a detailed description in the
+        summary.
+    repo_details (Dict): Details about the repository.
+    jira_context (Dict?): Optional JIRA issue context to enhance the summary.
+
+Returns:
+    Dict: A dictionary containing the title and description for the commit. If
+        generate_description is False,
+        the &apos;description&apos; key may be absent.
+
+Raises:
+    ValueError: If the LLM model is not configured.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/llm_client.py" line="40" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/llm_client.py" bodystart="40" bodyend="177"/>
+        <references refid="classpenify__hook_1_1llm__client_1_1LLMClient_1ad6f06658ca922793f879474f2234518e" compoundref="llm__client_8py" startline="33" endline="39">penify_hook.llm_client.LLMClient.litellm</references>
+        <references refid="classpenify__hook_1_1llm__client_1_1LLMClient_1abc2cb6b1d6d9b5dc16401ca078ec8c10" compoundref="llm__client_8py" startline="25">penify_hook.llm_client.LLMClient.model</references>
+        <referencedby refid="classpenify__hook_1_1api__client_1_1APIClient_1ac0ada470b897935f9fb372cd0e7e51e3" compoundref="api__client_8py" startline="123" endline="145">penify_hook.api_client.APIClient.generate_commit_summary_with_llm</referencedby>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+<para><verbatim>Client for interacting with LLM models using LiteLLM.
+</verbatim> </para>
+    </detaileddescription>
+    <collaborationgraph>
+      <node id="1">
+        <label>penify_hook.llm_client.LLMClient</label>
+        <link refid="classpenify__hook_1_1llm__client_1_1LLMClient"/>
+      </node>
+    </collaborationgraph>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/llm_client.py" line="10" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/llm_client.py" bodystart="10" bodyend="177"/>
+    <listofallmembers>
+      <member refid="classpenify__hook_1_1llm__client_1_1LLMClient_1a76d92354f585ab4bb291169f9f530764" prot="public" virt="non-virtual"><scope>penify_hook::llm_client::LLMClient</scope><name>__init__</name></member>
+      <member refid="classpenify__hook_1_1llm__client_1_1LLMClient_1a76c2e9805f805624ab9c55a9f1f8d362" prot="private" virt="non-virtual"><scope>penify_hook::llm_client::LLMClient</scope><name>_litellm</name></member>
+      <member refid="classpenify__hook_1_1llm__client_1_1LLMClient_1a2ad3014dac466ee1d8e00306d0cf2000" prot="public" virt="non-virtual"><scope>penify_hook::llm_client::LLMClient</scope><name>generate_commit_summary</name></member>
+      <member refid="classpenify__hook_1_1llm__client_1_1LLMClient_1ad6f06658ca922793f879474f2234518e" prot="public" virt="non-virtual"><scope>penify_hook::llm_client::LLMClient</scope><name>litellm</name></member>
+      <member refid="classpenify__hook_1_1llm__client_1_1LLMClient_1abc2cb6b1d6d9b5dc16401ca078ec8c10" prot="public" virt="non-virtual"><scope>penify_hook::llm_client::LLMClient</scope><name>model</name></member>
+    </listofallmembers>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/classpenify__hook_1_1utils_1_1GitRepoNotFoundError.xml b/docs345/xml/classpenify__hook_1_1utils_1_1GitRepoNotFoundError.xml
new file mode 100644
index 0000000..f40e622
--- /dev/null
+++ b/docs345/xml/classpenify__hook_1_1utils_1_1GitRepoNotFoundError.xml
@@ -0,0 +1,38 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="classpenify__hook_1_1utils_1_1GitRepoNotFoundError" kind="class" language="Python" prot="public">
+    <compoundname>penify_hook::utils::GitRepoNotFoundError</compoundname>
+    <basecompoundref refid="classException" prot="public" virt="non-virtual">Exception</basecompoundref>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <inheritancegraph>
+      <node id="2">
+        <label>Exception</label>
+        <link refid="classException"/>
+      </node>
+      <node id="1">
+        <label>penify_hook.utils.GitRepoNotFoundError</label>
+        <link refid="classpenify__hook_1_1utils_1_1GitRepoNotFoundError"/>
+        <childnode refid="2" relation="public-inheritance">
+        </childnode>
+      </node>
+    </inheritancegraph>
+    <collaborationgraph>
+      <node id="2">
+        <label>Exception</label>
+        <link refid="classException"/>
+      </node>
+      <node id="1">
+        <label>penify_hook.utils.GitRepoNotFoundError</label>
+        <link refid="classpenify__hook_1_1utils_1_1GitRepoNotFoundError"/>
+        <childnode refid="2" relation="public-inheritance">
+        </childnode>
+      </node>
+    </collaborationgraph>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/utils.py" line="9" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/utils.py" bodystart="9" bodyend="12"/>
+    <listofallmembers>
+    </listofallmembers>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/classtests_1_1test__commit__commands_1_1TestCommitCommands.xml b/docs345/xml/classtests_1_1test__commit__commands_1_1TestCommitCommands.xml
new file mode 100644
index 0000000..74c6a42
--- /dev/null
+++ b/docs345/xml/classtests_1_1test__commit__commands_1_1TestCommitCommands.xml
@@ -0,0 +1,551 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="classtests_1_1test__commit__commands_1_1TestCommitCommands" kind="class" language="Python" prot="public">
+    <compoundname>tests::test_commit_commands::TestCommitCommands</compoundname>
+      <sectiondef kind="public-func">
+      <memberdef kind="function" id="classtests_1_1test__commit__commands_1_1TestCommitCommands_1abcd2354a2af4afe19e57877628d3acc2" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_commit_commands.TestCommitCommands.mock_api_client</definition>
+        <argsstring>(self)</argsstring>
+        <name>mock_api_client</name>
+        <qualifiedname>tests.test_commit_commands.TestCommitCommands.mock_api_client</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Mocks an instance of APIClient using unittest.mock.
+
+This function creates a mock object for APIClient and yields it along
+with the mocked instance. It is useful for testing purposes where real
+API calls should be avoided.
+
+Yields:
+    tuple: A tuple containing the mock of APIClient and the mocked instance of
+        APIClient.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" line="11" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" bodystart="11" bodyend="27"/>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a20e78370ff5bd6223cc1dd4323a86ea4" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_commit_commands.TestCommitCommands.mock_llm_client</definition>
+        <argsstring>(self)</argsstring>
+        <name>mock_llm_client</name>
+        <qualifiedname>tests.test_commit_commands.TestCommitCommands.mock_llm_client</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Mock an instance of LLMClient for testing purposes.
+
+This function yields a mock object representing an instance of
+LLMClient, which can be used to simulate interactions with a language
+model during testing. The mock is patched to replace the actual
+LLMClient class from the penify_hook module.
+
+Yields:
+    tuple: A tuple containing two elements:
+        - mock (MagicMock): The mock object for LLMClient.
+        - llm_client_instance (MagicMock): An instance of the mocked LLMClient.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" line="29" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" bodystart="29" bodyend="47"/>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a05adaa9a713ff1be657455d0667bc6be" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_commit_commands.TestCommitCommands.mock_jira_client</definition>
+        <argsstring>(self)</argsstring>
+        <name>mock_jira_client</name>
+        <qualifiedname>tests.test_commit_commands.TestCommitCommands.mock_jira_client</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Create a mock JIRA client for testing purposes.
+
+This function yields a tuple containing a mock JIRA client instance and
+its `is_connected` method. The mock client is configured to simulate an
+active connection. This is useful for unit tests that require
+interaction with a JIRA client without making actual network calls.
+
+Yields:
+    tuple: A tuple containing the mocked JIRA client instance and its
+        `is_connected` method.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" line="49" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" bodystart="49" bodyend="67"/>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__commit__commands_1_1TestCommitCommands_1aa9b25a4bf692b8736164695072a398f6" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_commit_commands.TestCommitCommands.mock_commit_doc_gen</definition>
+        <argsstring>(self)</argsstring>
+        <name>mock_commit_doc_gen</name>
+        <qualifiedname>tests.test_commit_commands.TestCommitCommands.mock_commit_doc_gen</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Mocks the CommitDocGenHook class and returns a MagicMock instance.
+
+This function uses the `patch` decorator from the `unittest.mock` module
+to create a mock of the `CommitDocGenHook` class. It then sets up this
+mock to return a new `MagicMock` instance when invoked. The function
+yields both the mock object and the mocked instance, allowing for easy
+testing of functions that rely on `CommitDocGenHook`.
+
+Returns:
+    tuple: A tuple containing two elements:
+        - mock (patch): The patch object used to mock the `CommitDocGenHook`
+        class.
+        - doc_gen_instance (MagicMock): The mocked instance of
+        `CommitDocGenHook`.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" line="69" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" bodystart="69" bodyend="90"/>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a2842f456a8c0f1bf0f4def17c183c04e" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_commit_commands.TestCommitCommands.mock_git_folder_search</definition>
+        <argsstring>(self)</argsstring>
+        <name>mock_git_folder_search</name>
+        <qualifiedname>tests.test_commit_commands.TestCommitCommands.mock_git_folder_search</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Mock the `recursive_search_git_folder` function to return a predefined
+git folder path.
+
+This function uses the `patch` decorator from the `unittest.mock` module
+to intercept calls to `penify_hook.utils.recursive_search_git_folder`.
+When called, it will return &apos;/mock/git/folder&apos; instead of performing an
+actual search. This is useful for testing purposes where you need a
+consistent response without interacting with the file system.
+
+Yields:
+    MagicMock: A mock object that simulates the `recursive_search_git_folder` function.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" line="92" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" bodystart="92" bodyend="109"/>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__commit__commands_1_1TestCommitCommands_1afafbae3c9aeb0e50a75996256c02c8be" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_commit_commands.TestCommitCommands.mock_print_functions</definition>
+        <argsstring>(self)</argsstring>
+        <name>mock_print_functions</name>
+        <qualifiedname>tests.test_commit_commands.TestCommitCommands.mock_print_functions</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Mocks the print functions from `penify_hook.ui_utils` for testing
+purposes.
+
+This function uses Python&apos;s `unittest.mock.patch` to replace the actual
+print functions (`print`, `print_warning`, and `print_error`) with mock
+objects. These mock objects can be used in tests to capture calls made
+to these print functions without actually printing anything.
+
+Yields:
+    tuple: A tuple containing three mock objects corresponding to `print_info`,
+        `print_warning`,
+        and `print_error`.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" line="111" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" bodystart="111" bodyend="130"/>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__commit__commands_1_1TestCommitCommands_1acc4b1e4189792a3f7c11d2a745f479c0" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_commit_commands.TestCommitCommands.test_commit_code_with_llm_client</definition>
+        <argsstring>(self, mock_error, mock_warning, mock_info, mock_git_folder_search, mock_doc_gen, mock_llm_client, mock_api_client)</argsstring>
+        <name>test_commit_code_with_llm_client</name>
+        <qualifiedname>tests.test_commit_commands.TestCommitCommands.test_commit_code_with_llm_client</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>mock_error</type>
+          <defname>mock_error</defname>
+        </param>
+        <param>
+          <type>mock_warning</type>
+          <defname>mock_warning</defname>
+        </param>
+        <param>
+          <type>mock_info</type>
+          <defname>mock_info</defname>
+        </param>
+        <param>
+          <type><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a2842f456a8c0f1bf0f4def17c183c04e" kindref="member">mock_git_folder_search</ref></type>
+          <defname>mock_git_folder_search</defname>
+        </param>
+        <param>
+          <type>mock_doc_gen</type>
+          <defname>mock_doc_gen</defname>
+        </param>
+        <param>
+          <type><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a20e78370ff5bd6223cc1dd4323a86ea4" kindref="member">mock_llm_client</ref></type>
+          <defname>mock_llm_client</defname>
+        </param>
+        <param>
+          <type><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1abcd2354a2af4afe19e57877628d3acc2" kindref="member">mock_api_client</ref></type>
+          <defname>mock_api_client</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test committing code using an LLM client.
+
+This function sets up mock objects for various components and then calls
+the `commit_code` function with specified parameters. It verifies that
+the correct mocks are created and called with the appropriate arguments.
+
+Args:
+    mock_error (MagicMock): Mock object for error handling.
+    mock_warning (MagicMock): Mock object for warning logging.
+    mock_info (MagicMock): Mock object for info logging.
+    mock_git_folder_search (MagicMock): Mock object to simulate git folder search.
+    mock_doc_gen (MagicMock): Mock object for document generation.
+    mock_llm_client (MagicMock): Mock object for LLM client interaction.
+    mock_api_client (MagicMock): Mock object for API client interaction.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" line="138" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" bodystart="140" bodyend="190"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1commit__commands_1a62564c4e8ad59fc46d56cb0f9122a71a" compoundref="commit__commands_8py" startline="10" endline="99">penify_hook.commands.commit_commands.commit_code</references>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__commit__commands_1_1TestCommitCommands_1af9c09013055ec39ddde86b487aefcf8b" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_commit_commands.TestCommitCommands.test_commit_code_with_jira_client</definition>
+        <argsstring>(self, mock_error, mock_warning, mock_info, mock_git_folder_search, mock_doc_gen, mock_jira_client, mock_llm_client, mock_api_client)</argsstring>
+        <name>test_commit_code_with_jira_client</name>
+        <qualifiedname>tests.test_commit_commands.TestCommitCommands.test_commit_code_with_jira_client</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>mock_error</type>
+          <defname>mock_error</defname>
+        </param>
+        <param>
+          <type>mock_warning</type>
+          <defname>mock_warning</defname>
+        </param>
+        <param>
+          <type>mock_info</type>
+          <defname>mock_info</defname>
+        </param>
+        <param>
+          <type><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a2842f456a8c0f1bf0f4def17c183c04e" kindref="member">mock_git_folder_search</ref></type>
+          <defname>mock_git_folder_search</defname>
+        </param>
+        <param>
+          <type>mock_doc_gen</type>
+          <defname>mock_doc_gen</defname>
+        </param>
+        <param>
+          <type><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a05adaa9a713ff1be657455d0667bc6be" kindref="member">mock_jira_client</ref></type>
+          <defname>mock_jira_client</defname>
+        </param>
+        <param>
+          <type><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a20e78370ff5bd6223cc1dd4323a86ea4" kindref="member">mock_llm_client</ref></type>
+          <defname>mock_llm_client</defname>
+        </param>
+        <param>
+          <type><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1abcd2354a2af4afe19e57877628d3acc2" kindref="member">mock_api_client</ref></type>
+          <defname>mock_api_client</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test committing code using a JIRA client.
+
+This function tests the commit_code function with various parameters,
+including API and JIRA credentials. It sets up mock objects for
+dependencies such as the JIRA client, LLM client, and doc generator to
+simulate the behavior of the real classes. The function then calls
+commit_code and verifies that the JIRA client and doc generator are
+called with the correct parameters.
+
+Args:
+    mock_error (MagicMock): A MagicMock object for simulating error logging.
+    mock_warning (MagicMock): A MagicMock object for simulating warning logging.
+    mock_info (MagicMock): A MagicMock object for simulating info logging.
+    mock_git_folder_search (MagicMock): A MagicMock object for simulating the git folder search function.
+    mock_doc_gen (MagicMock): A MagicMock object for simulating the doc generator function.
+    mock_jira_client (MagicMock): A MagicMock object for simulating the JIRA client class.
+    mock_llm_client (MagicMock): A MagicMock object for simulating the LLM client class.
+    mock_api_client (MagicMock): A MagicMock object for simulating the API client class.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" line="199" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" bodystart="201" bodyend="260"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1commit__commands_1a62564c4e8ad59fc46d56cb0f9122a71a" compoundref="commit__commands_8py" startline="10" endline="99">penify_hook.commands.commit_commands.commit_code</references>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__commit__commands_1_1TestCommitCommands_1acea0d934ee0f2b914b0b893736e8fe4e" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_commit_commands.TestCommitCommands.test_commit_code_with_jira_connection_failure</definition>
+        <argsstring>(self, mock_error, mock_warning, mock_info, mock_git_folder_search, mock_doc_gen, mock_jira_client, mock_api_client)</argsstring>
+        <name>test_commit_code_with_jira_connection_failure</name>
+        <qualifiedname>tests.test_commit_commands.TestCommitCommands.test_commit_code_with_jira_connection_failure</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>mock_error</type>
+          <defname>mock_error</defname>
+        </param>
+        <param>
+          <type>mock_warning</type>
+          <defname>mock_warning</defname>
+        </param>
+        <param>
+          <type>mock_info</type>
+          <defname>mock_info</defname>
+        </param>
+        <param>
+          <type><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a2842f456a8c0f1bf0f4def17c183c04e" kindref="member">mock_git_folder_search</ref></type>
+          <defname>mock_git_folder_search</defname>
+        </param>
+        <param>
+          <type>mock_doc_gen</type>
+          <defname>mock_doc_gen</defname>
+        </param>
+        <param>
+          <type><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a05adaa9a713ff1be657455d0667bc6be" kindref="member">mock_jira_client</ref></type>
+          <defname>mock_jira_client</defname>
+        </param>
+        <param>
+          <type><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1abcd2354a2af4afe19e57877628d3acc2" kindref="member">mock_api_client</ref></type>
+          <defname>mock_api_client</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test the commit_code function when JIRA connection fails.
+
+This function tests the scenario where the JIRA connection fails during
+a code commit. It sets up various mocks to simulate different components
+of the system and then calls the `commit_code` function with specific
+parameters. The function is expected to handle the JIRA connection
+failure gracefully by logging an appropriate warning.
+
+Args:
+    mock_error (MagicMock): Mock for error logging.
+    mock_warning (MagicMock): Mock for warning logging.
+    mock_info (MagicMock): Mock for info logging.
+    mock_git_folder_search (MagicMock): Mock for searching the Git folder.
+    mock_doc_gen (MagicMock): Mock for generating documentation.
+    mock_jira_client (MagicMock): Mock for creating a JIRA client.
+    mock_api_client (MagicMock): Mock for creating an API client.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" line="268" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" bodystart="270" bodyend="317"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1commit__commands_1a62564c4e8ad59fc46d56cb0f9122a71a" compoundref="commit__commands_8py" startline="10" endline="99">penify_hook.commands.commit_commands.commit_code</references>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a43c2ff3707124aa48e8eb581106b8691" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_commit_commands.TestCommitCommands.test_commit_code_error_handling</definition>
+        <argsstring>(self, mock_print, mock_exit, mock_git_folder_search, mock_doc_gen, mock_api_client)</argsstring>
+        <name>test_commit_code_error_handling</name>
+        <qualifiedname>tests.test_commit_commands.TestCommitCommands.test_commit_code_error_handling</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>mock_print</type>
+          <defname>mock_print</defname>
+        </param>
+        <param>
+          <type>mock_exit</type>
+          <defname>mock_exit</defname>
+        </param>
+        <param>
+          <type><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a2842f456a8c0f1bf0f4def17c183c04e" kindref="member">mock_git_folder_search</ref></type>
+          <defname>mock_git_folder_search</defname>
+        </param>
+        <param>
+          <type>mock_doc_gen</type>
+          <defname>mock_doc_gen</defname>
+        </param>
+        <param>
+          <type><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1abcd2354a2af4afe19e57877628d3acc2" kindref="member">mock_api_client</ref></type>
+          <defname>mock_api_client</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test the error handling in the test_commit_code function.
+
+This function sets up mocks to simulate exceptions and test the error
+handling of the commit_code function. It verifies that the function
+correctly prints an error message and exits with a status code of 1 when
+an exception occurs during documentation generation.
+
+Args:
+    mock_print (MagicMock): Mock for the print function, used to verify error message output.
+    mock_exit (MagicMock): Mock for the sys.exit function, used to verify exit behavior.
+    mock_git_folder_search (MagicMock): Mock for the git_folder_search function, returning a mock Git folder
+        path.
+    mock_doc_gen (MagicMock): Mock for the doc_gen function, simulating an exception during
+        documentation generation.
+    mock_api_client (MagicMock): Mock for the API client class, not directly used but referenced in the
+        function signature.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" line="323" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" bodystart="324" bodyend="358"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1commit__commands_1a62564c4e8ad59fc46d56cb0f9122a71a" compoundref="commit__commands_8py" startline="10" endline="99">penify_hook.commands.commit_commands.commit_code</references>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a4d04b125e102190a768f65f1948f15bc" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_commit_commands.TestCommitCommands.test_setup_commit_parser</definition>
+        <argsstring>(self)</argsstring>
+        <name>test_setup_commit_parser</name>
+        <qualifiedname>tests.test_commit_commands.TestCommitCommands.test_setup_commit_parser</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Set up the argument parser for the commit command.
+
+This function configures an argument parser to handle various options
+for committing changes. It adds three arguments: - &apos;-m&apos; or &apos;--message&apos;:
+An optional argument to specify a contextual commit message with a
+default value of &quot;N/A&quot;. - &apos;-e&apos; or &apos;--terminal&apos;: A boolean flag to open
+an edit terminal before committing. - &apos;-d&apos; or &apos;--description&apos;: A boolean
+flag that, when set to False, indicates the generation of a commit
+message with title and description.
+
+Args:
+    parser (MagicMock): The argument parser to be configured.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" line="359" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" bodystart="359" bodyend="382"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1commit__commands_1a8627583116eb78e31a4d3cdc16d2f15c" compoundref="commit__commands_8py" startline="100" endline="127">penify_hook.commands.commit_commands.setup_commit_parser</references>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__commit__commands_1_1TestCommitCommands_1ac13e368262340af98b30fd8ebdac6597" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_commit_commands.TestCommitCommands.test_handle_commit</definition>
+        <argsstring>(self, mock_print_info, mock_commit_code, mock_get_token, mock_get_llm_config, mock_get_jira_config)</argsstring>
+        <name>test_handle_commit</name>
+        <qualifiedname>tests.test_commit_commands.TestCommitCommands.test_handle_commit</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>mock_print_info</type>
+          <defname>mock_print_info</defname>
+        </param>
+        <param>
+          <type>mock_commit_code</type>
+          <defname>mock_commit_code</defname>
+        </param>
+        <param>
+          <type>mock_get_token</type>
+          <defname>mock_get_token</defname>
+        </param>
+        <param>
+          <type>mock_get_llm_config</type>
+          <defname>mock_get_llm_config</defname>
+        </param>
+        <param>
+          <type>mock_get_jira_config</type>
+          <defname>mock_get_jira_config</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test the handle_commit function with various mock objects.
+
+This function sets up mocks for retrieving LLM configuration, JIRA
+configuration, and commit code. It then creates an argument object and
+calls the handle_commit function. Finally, it verifies that the mock
+functions were called with the expected arguments.
+
+Args:
+    mock_print_info (MagicMock): Mock object for printing information.
+    mock_commit_code (MagicMock): Mock object for committing code.
+    mock_get_token (MagicMock): Mock object for retrieving API token.
+    mock_get_llm_config (MagicMock): Mock object for retrieving LLM configuration.
+    mock_get_jira_config (MagicMock): Mock object for retrieving JIRA configuration.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" line="389" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" bodystart="390" bodyend="435"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1commit__commands_1af4f739f524c38b437e4e47673d683e23" compoundref="commit__commands_8py" startline="128" endline="169">penify_hook.commands.commit_commands.handle_commit</references>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <collaborationgraph>
+      <node id="1">
+        <label>tests.test_commit_commands.TestCommitCommands</label>
+        <link refid="classtests_1_1test__commit__commands_1_1TestCommitCommands"/>
+      </node>
+    </collaborationgraph>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" line="8" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" bodystart="8" bodyend="435"/>
+    <listofallmembers>
+      <member refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1abcd2354a2af4afe19e57877628d3acc2" prot="public" virt="non-virtual"><scope>tests::test_commit_commands::TestCommitCommands</scope><name>mock_api_client</name></member>
+      <member refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1aa9b25a4bf692b8736164695072a398f6" prot="public" virt="non-virtual"><scope>tests::test_commit_commands::TestCommitCommands</scope><name>mock_commit_doc_gen</name></member>
+      <member refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a2842f456a8c0f1bf0f4def17c183c04e" prot="public" virt="non-virtual"><scope>tests::test_commit_commands::TestCommitCommands</scope><name>mock_git_folder_search</name></member>
+      <member refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a05adaa9a713ff1be657455d0667bc6be" prot="public" virt="non-virtual"><scope>tests::test_commit_commands::TestCommitCommands</scope><name>mock_jira_client</name></member>
+      <member refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a20e78370ff5bd6223cc1dd4323a86ea4" prot="public" virt="non-virtual"><scope>tests::test_commit_commands::TestCommitCommands</scope><name>mock_llm_client</name></member>
+      <member refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1afafbae3c9aeb0e50a75996256c02c8be" prot="public" virt="non-virtual"><scope>tests::test_commit_commands::TestCommitCommands</scope><name>mock_print_functions</name></member>
+      <member refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a43c2ff3707124aa48e8eb581106b8691" prot="public" virt="non-virtual"><scope>tests::test_commit_commands::TestCommitCommands</scope><name>test_commit_code_error_handling</name></member>
+      <member refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1af9c09013055ec39ddde86b487aefcf8b" prot="public" virt="non-virtual"><scope>tests::test_commit_commands::TestCommitCommands</scope><name>test_commit_code_with_jira_client</name></member>
+      <member refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1acea0d934ee0f2b914b0b893736e8fe4e" prot="public" virt="non-virtual"><scope>tests::test_commit_commands::TestCommitCommands</scope><name>test_commit_code_with_jira_connection_failure</name></member>
+      <member refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1acc4b1e4189792a3f7c11d2a745f479c0" prot="public" virt="non-virtual"><scope>tests::test_commit_commands::TestCommitCommands</scope><name>test_commit_code_with_llm_client</name></member>
+      <member refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1ac13e368262340af98b30fd8ebdac6597" prot="public" virt="non-virtual"><scope>tests::test_commit_commands::TestCommitCommands</scope><name>test_handle_commit</name></member>
+      <member refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a4d04b125e102190a768f65f1948f15bc" prot="public" virt="non-virtual"><scope>tests::test_commit_commands::TestCommitCommands</scope><name>test_setup_commit_parser</name></member>
+    </listofallmembers>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/classtests_1_1test__config__commands_1_1TestConfigCommands.xml b/docs345/xml/classtests_1_1test__config__commands_1_1TestConfigCommands.xml
new file mode 100644
index 0000000..dacd0b1
--- /dev/null
+++ b/docs345/xml/classtests_1_1test__config__commands_1_1TestConfigCommands.xml
@@ -0,0 +1,578 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="classtests_1_1test__config__commands_1_1TestConfigCommands" kind="class" language="Python" prot="public">
+    <compoundname>tests::test_config_commands::TestConfigCommands</compoundname>
+      <sectiondef kind="public-func">
+      <memberdef kind="function" id="classtests_1_1test__config__commands_1_1TestConfigCommands_1a2e8162082bcdd5652bb37bdb14cf453a" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_config_commands.TestConfigCommands.test_get_penify_config_existing_dir</definition>
+        <argsstring>(self, mock_file_open, mock_makedirs, mock_path, mock_git_folder)</argsstring>
+        <name>test_get_penify_config_existing_dir</name>
+        <qualifiedname>tests.test_config_commands.TestConfigCommands.test_get_penify_config_existing_dir</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>mock_file_open</type>
+          <defname>mock_file_open</defname>
+        </param>
+        <param>
+          <type>mock_makedirs</type>
+          <defname>mock_makedirs</defname>
+        </param>
+        <param>
+          <type>mock_path</type>
+          <defname>mock_path</defname>
+        </param>
+        <param>
+          <type>mock_git_folder</type>
+          <defname>mock_git_folder</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test the get_penify_config function when the .penify config directory
+exists.
+
+It should not create a new directory and assert that all mocked
+functions were called correctly.
+
+Args:
+    mock_file_open (MagicMock): A MagicMock object simulating the open() function.
+    mock_makedirs (MagicMock): A MagicMock object simulating the os.makedirs() function.
+    mock_path (MagicMock): A MagicMock object simulating the Path class from pathlib module.
+    mock_git_folder (MagicMock): A MagicMock object simulating the git_folder_search() function.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" line="22" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" bodystart="22" bodyend="55"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a6559a82d0bf727703d550d1003d3ed20" compoundref="config__commands_8py" startline="68" endline="104">penify_hook.commands.config_commands.get_penify_config</references>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__config__commands_1_1TestConfigCommands_1a33d4760eee3b67e1cde3aed755ebb948" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_config_commands.TestConfigCommands.test_get_penify_config_new_dir</definition>
+        <argsstring>(self, mock_file_open, mock_makedirs, mock_path, mock_git_folder)</argsstring>
+        <name>test_get_penify_config_new_dir</name>
+        <qualifiedname>tests.test_config_commands.TestConfigCommands.test_get_penify_config_new_dir</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>mock_file_open</type>
+          <defname>mock_file_open</defname>
+        </param>
+        <param>
+          <type>mock_makedirs</type>
+          <defname>mock_makedirs</defname>
+        </param>
+        <param>
+          <type>mock_path</type>
+          <defname>mock_path</defname>
+        </param>
+        <param>
+          <type>mock_git_folder</type>
+          <defname>mock_git_folder</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test the behavior of get_penify_config when the .penify directory does
+not exist.
+
+This function mocks various system calls to simulate a scenario where
+the .penify directory is not present. It then asserts that the
+appropriate actions are taken to create the directory and write an empty
+JSON file.
+
+Args:
+    mock_file_open (MagicMock): A MagicMock object simulating the `open` function.
+    mock_makedirs (MagicMock): A MagicMock object simulating the `os.makedirs` function.
+    mock_path (MagicMock): A MagicMock object simulating the `Path` class from `pathlib`.
+    mock_git_folder (MagicMock): A MagicMock object simulating a git folder search function.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" line="60" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" bodystart="60" bodyend="94"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a6559a82d0bf727703d550d1003d3ed20" compoundref="config__commands_8py" startline="68" endline="104">penify_hook.commands.config_commands.get_penify_config</references>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__config__commands_1_1TestConfigCommands_1adf9f2233a3f4cc5725b9d4f05758b167" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_config_commands.TestConfigCommands.test_get_llm_config_exists</definition>
+        <argsstring>(self, mock_file_open, mock_get_config)</argsstring>
+        <name>test_get_llm_config_exists</name>
+        <qualifiedname>tests.test_config_commands.TestConfigCommands.test_get_llm_config_exists</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>mock_file_open</type>
+          <defname>mock_file_open</defname>
+        </param>
+        <param>
+          <type>mock_get_config</type>
+          <defname>mock_get_config</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test the get_llm_config function when the configuration file exists.
+
+This function sets up a mock configuration file that exists and returns
+it when called. It then calls the get_llm_config function and asserts
+that it returns the correct configuration dictionary. Additionally, it
+checks that the mock_file_open function was called with the correct
+arguments.
+
+Args:
+    mock_file_open (MagicMock): A mock for the open() function.
+    mock_get_config (MagicMock): A mock for the get_config() function.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" line="97" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" bodystart="97" bodyend="126"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a6492bc8e7df6e38bb06ad05e572d4cc0" compoundref="config__commands_8py" startline="235" endline="263">penify_hook.commands.config_commands.get_llm_config</references>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__config__commands_1_1TestConfigCommands_1abd12f028b89aa9cd1152c0b9ece5d3cd" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_config_commands.TestConfigCommands.test_get_llm_config_empty</definition>
+        <argsstring>(self, mock_file_open, mock_get_config)</argsstring>
+        <name>test_get_llm_config_empty</name>
+        <qualifiedname>tests.test_config_commands.TestConfigCommands.test_get_llm_config_empty</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>mock_file_open</type>
+          <defname>mock_file_open</defname>
+        </param>
+        <param>
+          <type>mock_get_config</type>
+          <defname>mock_get_config</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test the behavior of get_llm_config when called with an empty
+configuration file.
+
+This function sets up a mock configuration file that exists but returns
+no content. It then calls the `get_llm_config` function and asserts that
+it returns an empty dictionary and that the file open method was called
+exactly once with the correct arguments.
+
+Args:
+    mock_file_open (MagicMock): A MagicMock object simulating the built-in open function.
+    mock_get_config (MagicMock): A MagicMock object simulating the get_config function.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" line="129" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" bodystart="129" bodyend="154"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a6492bc8e7df6e38bb06ad05e572d4cc0" compoundref="config__commands_8py" startline="235" endline="263">penify_hook.commands.config_commands.get_llm_config</references>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__config__commands_1_1TestConfigCommands_1a473984d31452b56acd6ce4011a1248bd" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_config_commands.TestConfigCommands.test_get_llm_config_invalid_json</definition>
+        <argsstring>(self, mock_print, mock_file_open, mock_get_config)</argsstring>
+        <name>test_get_llm_config_invalid_json</name>
+        <qualifiedname>tests.test_config_commands.TestConfigCommands.test_get_llm_config_invalid_json</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>mock_print</type>
+          <defname>mock_print</defname>
+        </param>
+        <param>
+          <type>mock_file_open</type>
+          <defname>mock_file_open</defname>
+        </param>
+        <param>
+          <type>mock_get_config</type>
+          <defname>mock_get_config</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test function to verify the behavior of get_llm_config when reading an
+invalid JSON file.
+
+It sets up a mock configuration file that exists but contains invalid
+JSON. The function is expected to handle this gracefully by printing an
+error message and returning an empty dictionary.
+
+Args:
+    mock_print (MagicMock): Mock for the print function.
+    mock_file_open (MagicMock): Mock for the open function.
+    mock_get_config (MagicMock): Mock for the get_config function, which returns the mock configuration
+        file.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" line="158" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" bodystart="158" bodyend="185"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a6492bc8e7df6e38bb06ad05e572d4cc0" compoundref="config__commands_8py" startline="235" endline="263">penify_hook.commands.config_commands.get_llm_config</references>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__config__commands_1_1TestConfigCommands_1aee37b97432821d19758c6325d4c74bcf" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_config_commands.TestConfigCommands.test_get_jira_config_exists</definition>
+        <argsstring>(self, mock_file_open, mock_get_config)</argsstring>
+        <name>test_get_jira_config_exists</name>
+        <qualifiedname>tests.test_config_commands.TestConfigCommands.test_get_jira_config_exists</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>mock_file_open</type>
+          <defname>mock_file_open</defname>
+        </param>
+        <param>
+          <type>mock_get_config</type>
+          <defname>mock_get_config</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test that get_jira_config returns the correct JIRA configuration when
+the configuration file exists.
+
+It sets up a mock for the configuration file to simulate its existence
+and verifies that the function reads from the correct file and returns
+the expected JIRA configuration dictionary. Additionally, it checks that
+the mock file open is called with the appropriate arguments.
+
+Args:
+    mock_file_open (MagicMock): A mock for the `open` function.
+    mock_get_config (MagicMock): A mock for the `get_config` function, which is expected to return a mock
+        configuration file object.
+
+Returns:
+    None: This test function does not explicitly return anything. Its assertions
+        serve as the verification of its correctness.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" line="188" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" bodystart="188" bodyend="222"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a15bf3685c4dcb5c15ba6a4055e484cf2" compoundref="config__commands_8py" startline="264" endline="292">penify_hook.commands.config_commands.get_jira_config</references>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__config__commands_1_1TestConfigCommands_1acd8df8219441b9e9871b903a681400d9" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_config_commands.TestConfigCommands.test_save_llm_config_success</definition>
+        <argsstring>(self, mock_print, mock_json_dump, mock_file_open, mock_get_config)</argsstring>
+        <name>test_save_llm_config_success</name>
+        <qualifiedname>tests.test_config_commands.TestConfigCommands.test_save_llm_config_success</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>mock_print</type>
+          <defname>mock_print</defname>
+        </param>
+        <param>
+          <type>mock_json_dump</type>
+          <defname>mock_json_dump</defname>
+        </param>
+        <param>
+          <type>mock_file_open</type>
+          <defname>mock_file_open</defname>
+        </param>
+        <param>
+          <type>mock_get_config</type>
+          <defname>mock_get_config</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test the save_llm_config function successfully.
+
+This function tests that the save_llm_config function correctly saves an
+LLM configuration and handles various mock objects and side effects. It
+ensures that the function returns True upon successful execution, writes
+the expected configuration to a file, and prints a confirmation message.
+
+Args:
+    mock_print (MagicMock): A mock object for the print function.
+    mock_json_dump (MagicMock): A mock object for json.dump.
+    mock_file_open (MagicMock): A mock object for file opening.
+    mock_get_config (MagicMock): A mock object to return a configuration file mock.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" line="227" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" bodystart="227" bodyend="265"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a4617bc5956e502c9555dc0dda0376df4" compoundref="config__commands_8py" startline="119" endline="176">penify_hook.commands.config_commands.save_llm_config</references>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__config__commands_1_1TestConfigCommands_1a73a264dfb21e16003e095b79f6eab2ac" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_config_commands.TestConfigCommands.test_save_llm_config_failure</definition>
+        <argsstring>(self, mock_print, mock_file_open, mock_get_config)</argsstring>
+        <name>test_save_llm_config_failure</name>
+        <qualifiedname>tests.test_config_commands.TestConfigCommands.test_save_llm_config_failure</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>mock_print</type>
+          <defname>mock_print</defname>
+        </param>
+        <param>
+          <type>mock_file_open</type>
+          <defname>mock_file_open</defname>
+        </param>
+        <param>
+          <type>mock_get_config</type>
+          <defname>mock_get_config</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test function to verify that the save_llm_config function returns False
+and prints an error message when it fails to save the LLM configuration
+due to a permission error.
+
+It sets up a mock configuration file that exists and calls the
+save_llm_config function with valid parameters. The function is expected
+to return False and print &quot;Error saving LLM configuration: Permission
+denied&quot; in case of a failure.
+
+Args:
+    self (TestLLMConfig): An instance of the test class.
+    mock_print (MagicMock): A MagicMock object representing the print function, which will be used
+        to assert that it was called with the expected error message.
+    mock_file_open (MagicMock): A MagicMock object representing the open function, which is not used in
+        this test but is included as a parameter for completeness.
+    mock_get_config (MagicMock): A MagicMock object representing the get_config function, which will be
+        used to return the mock configuration file.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" line="269" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" bodystart="269" bodyend="300"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a4617bc5956e502c9555dc0dda0376df4" compoundref="config__commands_8py" startline="119" endline="176">penify_hook.commands.config_commands.save_llm_config</references>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__config__commands_1_1TestConfigCommands_1af8d62310da2d768e21770f8f01ff5375" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_config_commands.TestConfigCommands.test_save_jira_config_success</definition>
+        <argsstring>(self, mock_print, mock_json_dump, mock_file_open, mock_path)</argsstring>
+        <name>test_save_jira_config_success</name>
+        <qualifiedname>tests.test_config_commands.TestConfigCommands.test_save_jira_config_success</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>mock_print</type>
+          <defname>mock_print</defname>
+        </param>
+        <param>
+          <type>mock_json_dump</type>
+          <defname>mock_json_dump</defname>
+        </param>
+        <param>
+          <type>mock_file_open</type>
+          <defname>mock_file_open</defname>
+        </param>
+        <param>
+          <type>mock_path</type>
+          <defname>mock_path</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test the save_jira_config function to ensure it saves JIRA configuration
+successfully.
+
+This function sets up mocks for various dependencies and tests the
+functionality of saving a JIRA configuration. It asserts that the
+function returns `True`, the JSON dump is called with the correct
+configuration, and the print statement contains the expected message.
+
+Args:
+    mock_print (MagicMock): Mock for the print function.
+    mock_json_dump (MagicMock): Mock for the json.dump function.
+    mock_file_open (MagicMock): Mock for the open function.
+    mock_path (MagicMock): Mock for the path module.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" line="305" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" bodystart="305" bodyend="345"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1ab2486ac2bf16b4a671e49625bfa4f9b4" compoundref="config__commands_8py" startline="177" endline="234">penify_hook.commands.config_commands.save_jira_config</references>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__config__commands_1_1TestConfigCommands_1a3355f7d313bebaa71694387cf2bc5232" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_config_commands.TestConfigCommands.test_get_token_from_env</definition>
+        <argsstring>(self, mock_file_open, mock_path, mock_getenv)</argsstring>
+        <name>test_get_token_from_env</name>
+        <qualifiedname>tests.test_config_commands.TestConfigCommands.test_get_token_from_env</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>mock_file_open</type>
+          <defname>mock_file_open</defname>
+        </param>
+        <param>
+          <type>mock_path</type>
+          <defname>mock_path</defname>
+        </param>
+        <param>
+          <type>mock_getenv</type>
+          <defname>mock_getenv</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test retrieving a token from the environment variable.
+
+This function tests the behavior of `get_token` when an environment
+variable is set. It verifies that if the &apos;PENIFY_API_TOKEN&apos; environment
+variable exists, the function returns its value without attempting to
+read a file.
+
+Args:
+    mock_file_open (MagicMock): A MagicMock object for simulating file operations.
+    mock_path (MagicMock): A MagicMock object for simulating path operations.
+    mock_getenv (MagicMock): A MagicMock object for simulating environment variable retrieval.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" line="349" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" bodystart="349" bodyend="374"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a5503d51c905e2f1b299b12d2a73bd812" compoundref="config__commands_8py" startline="553" endline="582">penify_hook.commands.config_commands.get_token</references>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__config__commands_1_1TestConfigCommands_1a6c0207be563c3de59a6d16277805114c" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_config_commands.TestConfigCommands.test_get_token_from_config</definition>
+        <argsstring>(self, mock_file_open, mock_path, mock_getenv)</argsstring>
+        <name>test_get_token_from_config</name>
+        <qualifiedname>tests.test_config_commands.TestConfigCommands.test_get_token_from_config</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>mock_file_open</type>
+          <defname>mock_file_open</defname>
+        </param>
+        <param>
+          <type>mock_path</type>
+          <defname>mock_path</defname>
+        </param>
+        <param>
+          <type>mock_getenv</type>
+          <defname>mock_getenv</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test retrieving a token from the configuration.
+
+This function sets up mocks for environment variables and configuration
+files, calls the `get_token` function, and asserts its behavior. It
+verifies that when the environment variable is not found, the function
+reads a token from a configuration file located in the user&apos;s home
+directory.
+
+Args:
+    mock_file_open (MagicMock): A mock for the `open` function.
+    mock_path (MagicMock): A mock for the `pathlib.Path` class.
+    mock_getenv (MagicMock): A mock for the `os.getenv` function.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" line="378" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" bodystart="378" bodyend="409"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a5503d51c905e2f1b299b12d2a73bd812" compoundref="config__commands_8py" startline="553" endline="582">penify_hook.commands.config_commands.get_token</references>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__config__commands_1_1TestConfigCommands_1a400ca5d9fcdc159714e8df54920f9436" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_config_commands.TestConfigCommands.test_get_token_not_found</definition>
+        <argsstring>(self, mock_file_open, mock_path, mock_getenv)</argsstring>
+        <name>test_get_token_not_found</name>
+        <qualifiedname>tests.test_config_commands.TestConfigCommands.test_get_token_not_found</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>mock_file_open</type>
+          <defname>mock_file_open</defname>
+        </param>
+        <param>
+          <type>mock_path</type>
+          <defname>mock_path</defname>
+        </param>
+        <param>
+          <type>mock_getenv</type>
+          <defname>mock_getenv</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test the get_token function when the API token environment variable is
+not found.
+
+This function tests the scenario where the `PENIFY_API_TOKEN`
+environment variable is not set. It mocks the environment variable to
+return `None`, and verifies that the function returns `None`. The test
+also checks that the environment variable is accessed once and that a
+file open operation is attempted on a configuration file located in the
+user&apos;s home directory.
+
+Args:
+    mock_file_open (MagicMock): Mock for the built-in `open` function.
+    mock_path (MagicMock): Mock for the `pathlib.Path` module.
+    mock_getenv (MagicMock): Mock for the `os.getenv` function.
+
+Returns:
+    None: The function does not return anything; it asserts conditions to verify
+        correctness.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" line="413" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" bodystart="413" bodyend="450"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a5503d51c905e2f1b299b12d2a73bd812" compoundref="config__commands_8py" startline="553" endline="582">penify_hook.commands.config_commands.get_token</references>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <collaborationgraph>
+      <node id="1">
+        <label>tests.test_config_commands.TestConfigCommands</label>
+        <link refid="classtests_1_1test__config__commands_1_1TestConfigCommands"/>
+      </node>
+    </collaborationgraph>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" line="16" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" bodystart="16" bodyend="450"/>
+    <listofallmembers>
+      <member refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1aee37b97432821d19758c6325d4c74bcf" prot="public" virt="non-virtual"><scope>tests::test_config_commands::TestConfigCommands</scope><name>test_get_jira_config_exists</name></member>
+      <member refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1abd12f028b89aa9cd1152c0b9ece5d3cd" prot="public" virt="non-virtual"><scope>tests::test_config_commands::TestConfigCommands</scope><name>test_get_llm_config_empty</name></member>
+      <member refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1adf9f2233a3f4cc5725b9d4f05758b167" prot="public" virt="non-virtual"><scope>tests::test_config_commands::TestConfigCommands</scope><name>test_get_llm_config_exists</name></member>
+      <member refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a473984d31452b56acd6ce4011a1248bd" prot="public" virt="non-virtual"><scope>tests::test_config_commands::TestConfigCommands</scope><name>test_get_llm_config_invalid_json</name></member>
+      <member refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a2e8162082bcdd5652bb37bdb14cf453a" prot="public" virt="non-virtual"><scope>tests::test_config_commands::TestConfigCommands</scope><name>test_get_penify_config_existing_dir</name></member>
+      <member refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a33d4760eee3b67e1cde3aed755ebb948" prot="public" virt="non-virtual"><scope>tests::test_config_commands::TestConfigCommands</scope><name>test_get_penify_config_new_dir</name></member>
+      <member refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a6c0207be563c3de59a6d16277805114c" prot="public" virt="non-virtual"><scope>tests::test_config_commands::TestConfigCommands</scope><name>test_get_token_from_config</name></member>
+      <member refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a3355f7d313bebaa71694387cf2bc5232" prot="public" virt="non-virtual"><scope>tests::test_config_commands::TestConfigCommands</scope><name>test_get_token_from_env</name></member>
+      <member refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a400ca5d9fcdc159714e8df54920f9436" prot="public" virt="non-virtual"><scope>tests::test_config_commands::TestConfigCommands</scope><name>test_get_token_not_found</name></member>
+      <member refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1af8d62310da2d768e21770f8f01ff5375" prot="public" virt="non-virtual"><scope>tests::test_config_commands::TestConfigCommands</scope><name>test_save_jira_config_success</name></member>
+      <member refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a73a264dfb21e16003e095b79f6eab2ac" prot="public" virt="non-virtual"><scope>tests::test_config_commands::TestConfigCommands</scope><name>test_save_llm_config_failure</name></member>
+      <member refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1acd8df8219441b9e9871b903a681400d9" prot="public" virt="non-virtual"><scope>tests::test_config_commands::TestConfigCommands</scope><name>test_save_llm_config_success</name></member>
+    </listofallmembers>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/classtests_1_1test__web__config_1_1TestWebConfig.xml b/docs345/xml/classtests_1_1test__web__config_1_1TestWebConfig.xml
new file mode 100644
index 0000000..d218b6d
--- /dev/null
+++ b/docs345/xml/classtests_1_1test__web__config_1_1TestWebConfig.xml
@@ -0,0 +1,112 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="classtests_1_1test__web__config_1_1TestWebConfig" kind="class" language="Python" prot="public">
+    <compoundname>tests::test_web_config::TestWebConfig</compoundname>
+      <sectiondef kind="public-func">
+      <memberdef kind="function" id="classtests_1_1test__web__config_1_1TestWebConfig_1afc6440352201d207ea8b4d26f8ccfa35" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_web_config.TestWebConfig.test_config_llm_web_server_setup</definition>
+        <argsstring>(self, mock_resource_filename, mock_server, mock_webbrowser)</argsstring>
+        <name>test_config_llm_web_server_setup</name>
+        <qualifiedname>tests.test_web_config.TestWebConfig.test_config_llm_web_server_setup</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>mock_resource_filename</type>
+          <defname>mock_resource_filename</defname>
+        </param>
+        <param>
+          <type>mock_server</type>
+          <defname>mock_server</defname>
+        </param>
+        <param>
+          <type>mock_webbrowser</type>
+          <defname>mock_webbrowser</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Set up and test the web server configuration for an LLM (Large Language
+Model) web interface.
+
+This function configures a mock web server for testing purposes,
+including setting up resource filenames, mocking server behavior, and
+verifying that the web browser is opened and the server starts
+correctly. The function uses various mocks to simulate external
+dependencies such as `resource_filename` and `server`.
+
+Args:
+    mock_resource_filename (MagicMock): A MagicMock object simulating the `resource_filename` function.
+    mock_server (MagicMock): A MagicMock object simulating the context manager for the web server.
+    mock_webbrowser (MagicMock): A MagicMock object simulating the `webbrowser` module.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_web_config.py" line="18" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_web_config.py" bodystart="18" bodyend="55"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a185dfc34a655ed80e6c95939b6f3c35c" compoundref="config__commands_8py" startline="293" endline="423">penify_hook.commands.config_commands.config_llm_web</references>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__web__config_1_1TestWebConfig_1a06e600222e426b003850509cb1d3190a" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_web_config.TestWebConfig.test_config_jira_web_server_setup</definition>
+        <argsstring>(self, mock_resource_filename, mock_server, mock_webbrowser)</argsstring>
+        <name>test_config_jira_web_server_setup</name>
+        <qualifiedname>tests.test_web_config.TestWebConfig.test_config_jira_web_server_setup</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>mock_resource_filename</type>
+          <defname>mock_resource_filename</defname>
+        </param>
+        <param>
+          <type>mock_server</type>
+          <defname>mock_server</defname>
+        </param>
+        <param>
+          <type>mock_webbrowser</type>
+          <defname>mock_webbrowser</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test the configuration and setup of a JIRA web server.
+
+This function tests the entire process of setting up a JIRA web server,
+including mocking necessary resources, configuring the server to shut
+down after handling one request, and verifying that the web browser is
+opened with the correct URL. The function uses several mocks to simulate
+external dependencies such as resource files, servers, and web browsers.
+
+Args:
+    mock_resource_filename (MagicMock): A MagicMock object for simulating the `resource_filename` function.
+    mock_server (MagicMock): A MagicMock object for simulating the server setup.
+    mock_webbrowser (MagicMock): A MagicMock object for simulating the web browser opening.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_web_config.py" line="59" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_web_config.py" bodystart="59" bodyend="95"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1af115198ea5d6808ccb98733957f50b06" compoundref="config__commands_8py" startline="424" endline="552">penify_hook.commands.config_commands.config_jira_web</references>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <collaborationgraph>
+      <node id="1">
+        <label>tests.test_web_config.TestWebConfig</label>
+        <link refid="classtests_1_1test__web__config_1_1TestWebConfig"/>
+      </node>
+    </collaborationgraph>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_web_config.py" line="13" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_web_config.py" bodystart="13" bodyend="95"/>
+    <listofallmembers>
+      <member refid="classtests_1_1test__web__config_1_1TestWebConfig_1a06e600222e426b003850509cb1d3190a" prot="public" virt="non-virtual"><scope>tests::test_web_config::TestWebConfig</scope><name>test_config_jira_web_server_setup</name></member>
+      <member refid="classtests_1_1test__web__config_1_1TestWebConfig_1afc6440352201d207ea8b4d26f8ccfa35" prot="public" virt="non-virtual"><scope>tests::test_web_config::TestWebConfig</scope><name>test_config_llm_web_server_setup</name></member>
+    </listofallmembers>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/combine.xslt b/docs345/xml/combine.xslt
new file mode 100644
index 0000000..3bfa82c
--- /dev/null
+++ b/docs345/xml/combine.xslt
@@ -0,0 +1,15 @@
+<!-- XSLT script to combine the generated output into a single file. 
+     If you have xsltproc you could use:
+     xsltproc combine.xslt index.xml >all.xml
+-->
+<xsl:stylesheet xmlns:xsl="http://www.w3.org/1999/XSL/Transform" version="1.0">
+  <xsl:output method="xml" version="1.0" indent="no" standalone="yes" />
+  <xsl:template match="/">
+    <doxygen version="{doxygenindex/@version}" xml:lang="{doxygenindex/@xml:lang}">
+      <!-- Load all doxygen generated xml files -->
+      <xsl:for-each select="doxygenindex/compound">
+        <xsl:copy-of select="document( concat( @refid, '.xml' ) )/doxygen/*" />
+      </xsl:for-each>
+    </doxygen>
+  </xsl:template>
+</xsl:stylesheet>
diff --git a/docs345/xml/commit-commands_8md.xml b/docs345/xml/commit-commands_8md.xml
new file mode 100644
index 0000000..4ff7b63
--- /dev/null
+++ b/docs345/xml/commit-commands_8md.xml
@@ -0,0 +1,174 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="commit-commands_8md" kind="file" language="Markdown">
+    <compoundname>commit-commands.md</compoundname>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline><highlight class="normal">#<sp/>Penify<sp/>CLI<sp/>-<sp/>Commit<sp/>Commands</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">The<sp/>`commit`<sp/>command<sp/>allows<sp/>you<sp/>to<sp/>generate<sp/>smart,<sp/>AI-powered<sp/>commit<sp/>messages<sp/>for<sp/>your<sp/>Git<sp/>changes.<sp/>This<sp/>document<sp/>explains<sp/>all<sp/>available<sp/>options<sp/>and<sp/>combinations.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Basic<sp/>Usage</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>commit</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">By<sp/>default,<sp/>this<sp/>command:</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Analyzes<sp/>your<sp/>staged<sp/>Git<sp/>changes</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Generates<sp/>a<sp/>concise<sp/>commit<sp/>title<sp/>only</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Uses<sp/>local<sp/>LLM<sp/>if<sp/>configured,<sp/>or<sp/>falls<sp/>back<sp/>to<sp/>Penify<sp/>API</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Command<sp/>Options</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>`-m,<sp/>--message`</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Provide<sp/>context<sp/>for<sp/>the<sp/>commit<sp/>message<sp/>generation:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>commit<sp/>-m<sp/>&quot;Fix<sp/>login<sp/>flow&quot;</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">This<sp/>hint<sp/>helps<sp/>the<sp/>AI<sp/>understand<sp/>your<sp/>intention<sp/>and<sp/>improves<sp/>the<sp/>quality<sp/>of<sp/>the<sp/>generated<sp/>message.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>`-e,<sp/>--terminal`</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Open<sp/>an<sp/>editor<sp/>to<sp/>review<sp/>and<sp/>edit<sp/>the<sp/>generated<sp/>commit<sp/>message<sp/>before<sp/>committing:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>commit<sp/>-e</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">This<sp/>opens<sp/>your<sp/>default<sp/>Git<sp/>editor<sp/>with<sp/>the<sp/>generated<sp/>message<sp/>for<sp/>review.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>`-d,<sp/>--description`</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Generate<sp/>a<sp/>detailed<sp/>commit<sp/>message<sp/>with<sp/>both<sp/>title<sp/>and<sp/>description:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>commit<sp/>-d</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Without<sp/>this<sp/>flag,<sp/>only<sp/>the<sp/>commit<sp/>title<sp/>is<sp/>generated.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Option<sp/>Combinations</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">You<sp/>can<sp/>combine<sp/>these<sp/>options<sp/>for<sp/>different<sp/>workflows:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Generate<sp/>Title<sp/>Only<sp/>with<sp/>Context</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>commit<sp/>-m<sp/>&quot;Update<sp/>login<sp/>UI&quot;</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Generate<sp/>Title<sp/>and<sp/>Description<sp/>with<sp/>Context</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>commit<sp/>-m<sp/>&quot;Update<sp/>login<sp/>UI&quot;<sp/>-d</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Generate<sp/>and<sp/>Edit<sp/>Full<sp/>Commit<sp/>Message</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>commit<sp/>-d<sp/>-e</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Generate,<sp/>Edit,<sp/>and<sp/>Provide<sp/>Context</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>commit<sp/>-m<sp/>&quot;Refactor<sp/>authentication&quot;<sp/>-d<sp/>-e</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>LLM<sp/>and<sp/>JIRA<sp/>Integration</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Using<sp/>Local<sp/>LLM</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">If<sp/>you&apos;ve<sp/>configured<sp/>a<sp/>local<sp/>LLM<sp/>using<sp/>`penify<sp/>config<sp/>llm`,<sp/>the<sp/>commit<sp/>command<sp/>will<sp/>automatically<sp/>use<sp/>it<sp/>for<sp/>message<sp/>generation.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Benefits:</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Privacy:<sp/>your<sp/>code<sp/>changes<sp/>don&apos;t<sp/>leave<sp/>your<sp/>machine</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Speed:<sp/>no<sp/>network<sp/>latency</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Works<sp/>offline</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>JIRA<sp/>Enhancement</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">If<sp/>you&apos;ve<sp/>configured<sp/>JIRA<sp/>integration<sp/>using<sp/>`penify<sp/>config<sp/>jira`,<sp/>the<sp/>commit<sp/>command<sp/>will:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">1.<sp/>Detect<sp/>JIRA<sp/>issue<sp/>references<sp/>in<sp/>your<sp/>changes</highlight></codeline>
+<codeline><highlight class="normal">2.<sp/>Fetch<sp/>issue<sp/>details<sp/>from<sp/>your<sp/>JIRA<sp/>instance</highlight></codeline>
+<codeline><highlight class="normal">3.<sp/>Include<sp/>issue<sp/>information<sp/>in<sp/>the<sp/>commit<sp/>message</highlight></codeline>
+<codeline><highlight class="normal">4.<sp/>Format<sp/>the<sp/>commit<sp/>message<sp/>according<sp/>to<sp/>JIRA&apos;s<sp/>smart<sp/>commit<sp/>format</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Example<sp/>output:</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline><highlight class="normal">PROJ-123:<sp/>Fix<sp/>authentication<sp/>bug<sp/>in<sp/>login<sp/>flow</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>Updated<sp/>OAuth<sp/>token<sp/>validation</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Fixed<sp/>session<sp/>timeout<sp/>handling</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Added<sp/>unit<sp/>tests<sp/>for<sp/>edge<sp/>cases</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">[PROJ-123]</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Configuration<sp/>Requirements</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">For<sp/>the<sp/>`commit`<sp/>command<sp/>to<sp/>work:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">1.<sp/>You<sp/>must<sp/>have<sp/>configured<sp/>either:</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Local<sp/>LLM<sp/>via<sp/>`penify<sp/>config<sp/>llm`,<sp/>OR</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Logged<sp/>in<sp/>via<sp/>`penify<sp/>login`</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/></highlight></codeline>
+<codeline><highlight class="normal">2.<sp/>For<sp/>JIRA<sp/>enhancement<sp/>(optional):</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Configure<sp/>JIRA<sp/>via<sp/>`penify<sp/>config<sp/>jira`</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Examples</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Basic<sp/>Commit<sp/>with<sp/>Default<sp/>Settings</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Stage<sp/>your<sp/>changes</highlight></codeline>
+<codeline><highlight class="normal">git<sp/>add<sp/>.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Generate<sp/>commit<sp/>message</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>commit</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Commit<sp/>with<sp/>the<sp/>generated<sp/>message</highlight></codeline>
+<codeline><highlight class="normal">git<sp/>commit<sp/>-m<sp/>&quot;Generated<sp/>message<sp/>here&quot;</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Full<sp/>Workflow<sp/>with<sp/>All<sp/>Features</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Stage<sp/>your<sp/>changes</highlight></codeline>
+<codeline><highlight class="normal">git<sp/>add<sp/>.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Generate<sp/>detailed<sp/>commit<sp/>message<sp/>with<sp/>JIRA<sp/>integration,<sp/></highlight></codeline>
+<codeline><highlight class="normal">#<sp/>provide<sp/>context,<sp/>and<sp/>open<sp/>editor<sp/>for<sp/>review</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>commit<sp/>-m<sp/>&quot;Fix<sp/>login<sp/>issue&quot;<sp/>-d<sp/>-e</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>The<sp/>commit<sp/>is<sp/>automatically<sp/>completed<sp/>after<sp/>you<sp/>save<sp/>and<sp/>exit<sp/>the<sp/>editor</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Troubleshooting</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Common<sp/>Issues</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">1.<sp/>**&quot;No<sp/>LLM<sp/>model<sp/>or<sp/>API<sp/>token<sp/>provided&quot;**</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Run<sp/>`penify<sp/>config<sp/>llm`<sp/>to<sp/>configure<sp/>a<sp/>local<sp/>LLM,<sp/>or</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Run<sp/>`penify<sp/>login`<sp/>to<sp/>authenticate<sp/>with<sp/>Penify</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">2.<sp/>**&quot;Failed<sp/>to<sp/>connect<sp/>to<sp/>JIRA&quot;**</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Check<sp/>your<sp/>JIRA<sp/>configuration<sp/>with<sp/>`cat<sp/>~/.penify`</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Verify<sp/>your<sp/>network<sp/>connection</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Ensure<sp/>your<sp/>JIRA<sp/>credentials<sp/>are<sp/>valid</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">3.<sp/>**&quot;Error<sp/>initializing<sp/>LLM<sp/>client&quot;**</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Verify<sp/>your<sp/>LLM<sp/>configuration<sp/>settings</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Ensure<sp/>the<sp/>LLM<sp/>API<sp/>is<sp/>accessible</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/commit-commands.md"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/commit__analyzer_8py.xml b/docs345/xml/commit__analyzer_8py.xml
new file mode 100644
index 0000000..07676b8
--- /dev/null
+++ b/docs345/xml/commit__analyzer_8py.xml
@@ -0,0 +1,198 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="commit__analyzer_8py" kind="file" language="Python">
+    <compoundname>commit_analyzer.py</compoundname>
+    <innerclass refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook" prot="public">penify_hook::commit_analyzer::CommitDocGenHook</innerclass>
+    <innernamespace refid="namespacepenify__hook">penify_hook</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1commit__analyzer">penify_hook::commit_analyzer</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacepenify__hook_1_1commit__analyzer" refkind="compound"><highlight class="keyword">import</highlight><highlight class="normal"><sp/>os</highlight></codeline>
+<codeline lineno="2"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>re</highlight></codeline>
+<codeline lineno="3"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>subprocess</highlight></codeline>
+<codeline lineno="4"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>tempfile</highlight></codeline>
+<codeline lineno="5"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>typing<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>Optional,<sp/>List</highlight></codeline>
+<codeline lineno="6"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>git<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>Repo</highlight></codeline>
+<codeline lineno="7"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>tqdm<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>tqdm</highlight></codeline>
+<codeline lineno="8"><highlight class="normal"></highlight></codeline>
+<codeline lineno="9"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1base__analyzer" kindref="compound">penify_hook.base_analyzer</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>BaseAnalyzer</highlight></codeline>
+<codeline lineno="10"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1jira__client" kindref="compound">penify_hook.jira_client</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>JiraClient</highlight></codeline>
+<codeline lineno="11"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1ui__utils" kindref="compound">penify_hook.ui_utils</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>print_info,<sp/>print_success,<sp/>print_warning</highlight></codeline>
+<codeline lineno="12"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>.api_client<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>APIClient</highlight></codeline>
+<codeline lineno="13"><highlight class="normal"></highlight></codeline>
+<codeline lineno="14" refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook" kindref="compound">CommitDocGenHook</ref>(<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer" kindref="compound">BaseAnalyzer</ref>):</highlight></codeline>
+<codeline lineno="15" refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1af127d86729e226d74dbeb095b008db3e" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1af127d86729e226d74dbeb095b008db3e" kindref="member">__init__</ref>(self,<sp/>repo_path:<sp/>str,<sp/>api_client:<sp/>APIClient,<sp/>llm_client=</highlight><highlight class="keywordtype">None</highlight><highlight class="normal">,<sp/>jira_client=</highlight><highlight class="keywordtype">None</highlight><highlight class="normal">):</highlight></codeline>
+<codeline lineno="16"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>super().<ref refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1af127d86729e226d74dbeb095b008db3e" kindref="member">__init__</ref>(repo_path,<sp/>api_client)</highlight></codeline>
+<codeline lineno="17"><highlight class="normal"></highlight></codeline>
+<codeline lineno="18" refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1ad93360e31f2ec58a0d7c9f08b219028a" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1ad93360e31f2ec58a0d7c9f08b219028a" kindref="member">llm_client</ref><sp/>=<sp/>llm_client<sp/><sp/></highlight><highlight class="comment">#<sp/>Add<sp/>LLM<sp/>client<sp/>as<sp/>an<sp/>optional<sp/>parameter</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="19"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.jira_client:<sp/>JiraClient<sp/>=<sp/>jira_client<sp/><sp/></highlight><highlight class="comment">#<sp/>Add<sp/>JIRA<sp/>client<sp/>as<sp/>an<sp/>optional<sp/>parameter</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="20"><highlight class="normal"></highlight></codeline>
+<codeline lineno="21" refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a8496194276441fa2eb2fa014eaab9a37" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a8496194276441fa2eb2fa014eaab9a37" kindref="member">get_summary</ref>(self,<sp/>instruction:<sp/>str,<sp/>generate_description:<sp/>bool)<sp/>-&gt;<sp/>dict:</highlight></codeline>
+<codeline lineno="22"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Generate<sp/>a<sp/>summary<sp/>for<sp/>the<sp/>commit<sp/>based<sp/>on<sp/>the<sp/>staged<sp/>changes.</highlight></codeline>
+<codeline lineno="23"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="24"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>retrieves<sp/>the<sp/>differences<sp/>of<sp/>the<sp/>staged<sp/>changes<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the</highlight></codeline>
+<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>repository<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>generates<sp/>a<sp/>commit<sp/>summary<sp/>using<sp/>the<sp/>provided</highlight></codeline>
+<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>instruction.<sp/>If<sp/>there<sp/>are<sp/>no<sp/>changes<sp/>staged<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>commit,<sp/>an<sp/>exception<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="27"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>raised.<sp/>If<sp/>a<sp/>JIRA<sp/>client<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>connected,<sp/>it<sp/>will<sp/>attempt<sp/>to<sp/>extract<sp/>issue</highlight></codeline>
+<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>keys<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>the<sp/>current<sp/>branch<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>use<sp/>them<sp/>to<sp/>fetch<sp/>context.<sp/>The<sp/>summary</highlight></codeline>
+<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>can<sp/>be<sp/>generated<sp/>either<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>a<sp/>Language<sp/>Model<sp/>(LLM)<sp/>client<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/>through</highlight></codeline>
+<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>the<sp/>API<sp/>client.</highlight></codeline>
+<codeline lineno="31"><highlight class="normal"></highlight></codeline>
+<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>instruction<sp/>(str):<sp/>A<sp/>string<sp/>containing<sp/>instructions<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>generating<sp/>the<sp/>commit<sp/>summary.</highlight></codeline>
+<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>generate_description<sp/>(bool):<sp/>Whether<sp/>to<sp/>include<sp/>detailed<sp/>descriptions<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the<sp/>summary.</highlight></codeline>
+<codeline lineno="35"><highlight class="normal"></highlight></codeline>
+<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>dict:<sp/>The<sp/>generated<sp/>commit<sp/>summary<sp/>based<sp/>on<sp/>the<sp/>staged<sp/>changes,<sp/>provided</highlight></codeline>
+<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>instruction,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>any<sp/>relevant<sp/>JIRA<sp/>context.<sp/>The<sp/>dictionary<sp/>contains<sp/>keys</highlight></codeline>
+<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>such<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;summary&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;description&apos;</highlight><highlight class="normal">,<sp/>etc.,<sp/>depending<sp/>on<sp/>whether<sp/>a</highlight></codeline>
+<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>description<sp/>was<sp/>requested.</highlight></codeline>
+<codeline lineno="41"><highlight class="normal"></highlight></codeline>
+<codeline lineno="42"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Raises:</highlight></codeline>
+<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>ValueError:<sp/>If<sp/>there<sp/>are<sp/>no<sp/>changes<sp/>staged<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>commit.</highlight></codeline>
+<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="45"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>diff<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a3a9ddfa1dfba81fe21214fe486389369" kindref="member">repo</ref>.git.diff(&apos;--cached&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>diff:</highlight></codeline>
+<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">raise</highlight><highlight class="normal"><sp/>ValueError(</highlight><highlight class="stringliteral">&quot;No<sp/>changes<sp/>to<sp/>commit&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Get<sp/>JIRA<sp/>context<sp/>if<sp/>available</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_context<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>self.jira_client<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>self.jira_client.is_connected():</highlight></codeline>
+<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Check<sp/>branch<sp/>name<sp/>for<sp/>JIRA<sp/>issues</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>current_branch<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a3a9ddfa1dfba81fe21214fe486389369" kindref="member">repo</ref>.active_branch.name</highlight></codeline>
+<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>issue_keys<sp/>=<sp/>self.jira_client.extract_issue_keys_from_branch(current_branch)</highlight></codeline>
+<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>If<sp/>issues<sp/>found<sp/>in<sp/>branch,<sp/>get<sp/>context</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>issue_keys:</highlight></codeline>
+<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_context<sp/>=<sp/>self.jira_client.get_commit_context_from_issues(issue_keys)</highlight></codeline>
+<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Could<sp/>not<sp/>get<sp/>JIRA<sp/>context:<sp/>{e}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Use<sp/>LLM<sp/>client<sp/>if<sp/>provided,<sp/>otherwise<sp/>use<sp/>API<sp/>client</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" kindref="member">print_info</ref>(</highlight><highlight class="stringliteral">&quot;Fetching<sp/>commit<sp/>summary<sp/>from<sp/>LLM...&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>self.<ref refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1ad93360e31f2ec58a0d7c9f08b219028a" kindref="member">llm_client</ref>:</highlight></codeline>
+<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a81e9c55709205aaf4ebbe2b41683baf2" kindref="member">api_client</ref>.generate_commit_summary_with_llm(</highlight></codeline>
+<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>diff,<sp/>instruction,<sp/>generate_description,<sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a9cca3465b0cc00d78324b0a9eac1d7f5" kindref="member">repo_details</ref>,<sp/>self.<ref refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1ad93360e31f2ec58a0d7c9f08b219028a" kindref="member">llm_client</ref>,<sp/>jira_context</highlight></codeline>
+<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>)</highlight></codeline>
+<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a81e9c55709205aaf4ebbe2b41683baf2" kindref="member">api_client</ref>.generate_commit_summary(diff,<sp/>instruction,<sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a9cca3465b0cc00d78324b0a9eac1d7f5" kindref="member">repo_details</ref>,<sp/>jira_context)</highlight></codeline>
+<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="73" refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a6370a03f7ed9175ef6f81e931a105ea9" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a6370a03f7ed9175ef6f81e931a105ea9" kindref="member">run</ref>(self,<sp/>msg:<sp/>Optional[str],<sp/>edit_commit_message:<sp/>bool,<sp/>generate_description:<sp/>bool):</highlight></codeline>
+<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Run<sp/>the<sp/>post-commit<sp/>hook.</highlight></codeline>
+<codeline lineno="75"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="76"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>method<sp/>processes<sp/>the<sp/>modified<sp/>files<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>the<sp/>last<sp/>commit,<sp/>stages</highlight></codeline>
+<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>them,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>creates<sp/>an<sp/>auto-commit<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>an<sp/>optional<sp/>message.<sp/>It<sp/>also</highlight></codeline>
+<codeline lineno="78"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>handles<sp/>JIRA<sp/>integration<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>available.<sp/>If<sp/>there<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>an<sp/>error<sp/>generating</highlight></codeline>
+<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>the<sp/>commit<sp/>summary,<sp/>an<sp/>exception<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>raised.</highlight></codeline>
+<codeline lineno="80"><highlight class="normal"></highlight></codeline>
+<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>msg<sp/>(Optional[str]):<sp/>An<sp/>optional<sp/>message<sp/>to<sp/>include<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the<sp/>commit.</highlight></codeline>
+<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>edit_commit_message<sp/>(bool):<sp/>A<sp/>flag<sp/>indicating<sp/>whether<sp/>to<sp/>open<sp/>the<sp/>git<sp/>commit<sp/>edit<sp/>terminal<sp/>after</highlight></codeline>
+<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>committing.</highlight></codeline>
+<codeline lineno="85"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>generate_description<sp/>(bool):<sp/>A<sp/>flag<sp/>indicating<sp/>whether<sp/>to<sp/>include<sp/>a<sp/>description<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the<sp/>commit</highlight></codeline>
+<codeline lineno="86"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>message.</highlight></codeline>
+<codeline lineno="87"><highlight class="normal"></highlight></codeline>
+<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Raises:</highlight></codeline>
+<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Exception:<sp/>If<sp/>there<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>an<sp/>error<sp/>generating<sp/>the<sp/>commit<sp/>summary.</highlight></codeline>
+<codeline lineno="90"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="91"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>summary:<sp/>dict<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a8496194276441fa2eb2fa014eaab9a37" kindref="member">get_summary</ref>(msg,<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="92"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>summary:</highlight></codeline>
+<codeline lineno="93"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">raise</highlight><highlight class="normal"><sp/><ref refid="classException" kindref="compound">Exception</ref>(</highlight><highlight class="stringliteral">&quot;Error<sp/>generating<sp/>commit<sp/>summary&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="94"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="95"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>title<sp/>=<sp/>summary.get(</highlight><highlight class="stringliteral">&apos;title&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="96"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>description<sp/>=<sp/>summary.get(</highlight><highlight class="stringliteral">&apos;description&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="97"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="98"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>If<sp/>JIRA<sp/>client<sp/>is<sp/>available,<sp/>integrate<sp/>JIRA<sp/>information</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="99"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>self.jira_client<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>self.jira_client.is_connected():</highlight></codeline>
+<codeline lineno="100"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Add<sp/>JIRA<sp/>information<sp/>to<sp/>commit<sp/>message</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="101"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1adda13cc121d96342476ccf72b63a007f" kindref="member">process_jira_integration</ref>(title,<sp/>description,<sp/>msg)</highlight></codeline>
+<codeline lineno="102"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="103"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>commit<sp/>the<sp/>changes<sp/>to<sp/>the<sp/>repository<sp/>with<sp/>above<sp/>details</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="104"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>commit_msg<sp/>=<sp/>f</highlight><highlight class="stringliteral">&quot;{title}\n\n{description}&quot;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>generate_description<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>title</highlight></codeline>
+<codeline lineno="105"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a3a9ddfa1dfba81fe21214fe486389369" kindref="member">repo</ref>.git.commit(</highlight><highlight class="stringliteral">&apos;-m&apos;</highlight><highlight class="normal">,<sp/>commit_msg)</highlight></codeline>
+<codeline lineno="106"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a2b16aa6b68a9edea5f29f84f1c4be79a" kindref="member">print_success</ref>(f</highlight><highlight class="stringliteral">&quot;Commit:<sp/>{commit_msg}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="107"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="108"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>edit_commit_message:</highlight></codeline>
+<codeline lineno="109"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Open<sp/>the<sp/>git<sp/>commit<sp/>edit<sp/>terminal</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="110"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" kindref="member">print_info</ref>(</highlight><highlight class="stringliteral">&quot;Opening<sp/>git<sp/>commit<sp/>edit<sp/>terminal...&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="111"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1ac999c5cbc852a7ec3b412ccb43c274ca" kindref="member">_amend_commit</ref>()</highlight></codeline>
+<codeline lineno="112"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="113" refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1adda13cc121d96342476ccf72b63a007f" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1adda13cc121d96342476ccf72b63a007f" kindref="member">process_jira_integration</ref>(self,<sp/>title:<sp/>str,<sp/>description:<sp/>str,<sp/>msg:<sp/>str)<sp/>-&gt;<sp/>tuple:</highlight></codeline>
+<codeline lineno="114"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Process<sp/>JIRA<sp/>integration<sp/>for<sp/>the<sp/>commit<sp/>message.</highlight></codeline>
+<codeline lineno="115"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="116"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="117"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>title<sp/>(str):<sp/>Generated<sp/>commit<sp/>title.</highlight></codeline>
+<codeline lineno="118"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>description<sp/>(str):<sp/>Generated<sp/>commit<sp/>description.</highlight></codeline>
+<codeline lineno="119"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>msg<sp/>(str):<sp/>Original<sp/>user<sp/>message<sp/>that<sp/>might<sp/>contain<sp/>JIRA<sp/>references.</highlight></codeline>
+<codeline lineno="120"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="121"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="122"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>tuple:<sp/>A<sp/>tuple<sp/>containing<sp/>the<sp/>updated<sp/>commit<sp/>title<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>description<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="123"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>included<sp/>JIRA<sp/>information.</highlight></codeline>
+<codeline lineno="124"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="125"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Look<sp/>for<sp/>JIRA<sp/>issue<sp/>keys<sp/>in<sp/>commit<sp/>message,<sp/>title,<sp/>description<sp/>and<sp/>user<sp/>message</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="126"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>issue_keys<sp/>=<sp/>[]</highlight></codeline>
+<codeline lineno="127"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>self.jira_client:</highlight></codeline>
+<codeline lineno="128"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Extract<sp/>from<sp/>message<sp/>content</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="129"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>issue_keys<sp/>=<sp/>self.jira_client.extract_issue_keys(f</highlight><highlight class="stringliteral">&quot;{title}<sp/>{description}<sp/>{msg}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="130"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="131"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Also<sp/>check<sp/>the<sp/>branch<sp/>name<sp/>(which<sp/>often<sp/>follows<sp/>JIRA<sp/>naming<sp/>conventions)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="132"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="133"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>current_branch<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a3a9ddfa1dfba81fe21214fe486389369" kindref="member">repo</ref>.active_branch.name</highlight></codeline>
+<codeline lineno="134"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>branch_issue_keys<sp/>=<sp/>self.jira_client.extract_issue_keys_from_branch(current_branch)</highlight></codeline>
+<codeline lineno="135"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="136"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Add<sp/>any<sp/>new<sp/>keys<sp/>found<sp/>in<sp/>branch<sp/>name</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="137"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>key<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>branch_issue_keys:</highlight></codeline>
+<codeline lineno="138"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>key<sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>issue_keys:</highlight></codeline>
+<codeline lineno="139"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>issue_keys.append(key)</highlight></codeline>
+<codeline lineno="140"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" kindref="member">print_info</ref>(f</highlight><highlight class="stringliteral">&quot;Added<sp/>JIRA<sp/>issue<sp/>{key}<sp/>from<sp/>branch<sp/>name:<sp/>{current_branch}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="141"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="142"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a1ffbb9671dbe233770268e2dd66a67fa" kindref="member">print_warning</ref>(f</highlight><highlight class="stringliteral">&quot;Could<sp/>not<sp/>extract<sp/>JIRA<sp/>issues<sp/>from<sp/>branch<sp/>name:<sp/>{e}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="143"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="144"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>issue_keys:</highlight></codeline>
+<codeline lineno="145"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" kindref="member">print_info</ref>(f</highlight><highlight class="stringliteral">&quot;Found<sp/>JIRA<sp/>issues:<sp/>{&apos;,<sp/>&apos;.join(issue_keys)}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="146"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="147"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Format<sp/>commit<sp/>message<sp/>with<sp/>JIRA<sp/>info</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="148"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="149"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Add<sp/>comments<sp/>to<sp/>JIRA<sp/>issues</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="150"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>issue_key<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>issue_keys:</highlight></codeline>
+<codeline lineno="151"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>comment<sp/>=<sp/>(</highlight></codeline>
+<codeline lineno="152"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>f</highlight><highlight class="stringliteral">&quot;Commit<sp/>related<sp/>to<sp/>this<sp/>issue:\n\n&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="153"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>f</highlight><highlight class="stringliteral">&quot;**{title}**\n\n&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="154"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>f</highlight><highlight class="stringliteral">&quot;{description}\n\n&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="155"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>)</highlight></codeline>
+<codeline lineno="156"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.jira_client.add_comment(issue_key,<sp/>comment)</highlight></codeline>
+<codeline lineno="157"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="158"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a1ffbb9671dbe233770268e2dd66a67fa" kindref="member">print_warning</ref>(</highlight><highlight class="stringliteral">&quot;No<sp/>JIRA<sp/>issues<sp/>found<sp/>in<sp/>commit<sp/>message<sp/>or<sp/>branch<sp/>name&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="159"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="160"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>title,<sp/>description</highlight></codeline>
+<codeline lineno="161"><highlight class="normal"></highlight></codeline>
+<codeline lineno="162" refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1ac999c5cbc852a7ec3b412ccb43c274ca" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1ac999c5cbc852a7ec3b412ccb43c274ca" kindref="member">_amend_commit</ref>(self):</highlight></codeline>
+<codeline lineno="163"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Open<sp/>the<sp/>default<sp/>git<sp/>editor<sp/>for<sp/>editing<sp/>the<sp/>commit<sp/>message.</highlight></codeline>
+<codeline lineno="164"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="165"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>changes<sp/>the<sp/>current<sp/>working<sp/>directory<sp/>to<sp/>the<sp/>repository</highlight></codeline>
+<codeline lineno="166"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>path,<sp/>runs<sp/>the<sp/>git<sp/>command<sp/>to<sp/>amend<sp/>the<sp/>last<sp/>commit,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>opens<sp/>the</highlight></codeline>
+<codeline lineno="167"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>default<sp/>editor<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>user<sp/>to<sp/>modify<sp/>the<sp/>commit<sp/>message.<sp/>After<sp/>the</highlight></codeline>
+<codeline lineno="168"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>operation,<sp/>it<sp/>returns<sp/>to<sp/>the<sp/>original<sp/>directory.</highlight></codeline>
+<codeline lineno="169"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="170"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="171"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Change<sp/>to<sp/>the<sp/>repository<sp/>directory</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="172"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>os.chdir(self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a957e81a1ab561f6cecfbe999e7b85499" kindref="member">repo_path</ref>)</highlight></codeline>
+<codeline lineno="173"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="174"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Run<sp/>git<sp/>commit<sp/>--amend</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="175"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>subprocess.run([</highlight><highlight class="stringliteral">&apos;git&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;commit&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;--amend&apos;</highlight><highlight class="normal">],<sp/>check=</highlight><highlight class="keyword">True</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="176"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="177"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(</highlight><highlight class="stringliteral">&quot;Commit<sp/>message<sp/>amended<sp/>successfully.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="178"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>subprocess.CalledProcessError<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="179"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Error<sp/>amending<sp/>commit<sp/>message:<sp/>{e}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="180"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">finally</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="181"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Change<sp/>back<sp/>to<sp/>the<sp/>original<sp/>directory</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="182"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>os.chdir(os.path.dirname(os.path.abspath(__file__)))</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commit_analyzer.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/commit__commands_8py.xml b/docs345/xml/commit__commands_8py.xml
new file mode 100644
index 0000000..91f0914
--- /dev/null
+++ b/docs345/xml/commit__commands_8py.xml
@@ -0,0 +1,184 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="commit__commands_8py" kind="file" language="Python">
+    <compoundname>commit_commands.py</compoundname>
+    <innernamespace refid="namespacepenify__hook">penify_hook</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1commands">penify_hook::commands</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1commands_1_1commit__commands">penify_hook::commands::commit_commands</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacepenify__hook_1_1commands_1_1commit__commands" refkind="compound"><highlight class="keyword">import</highlight><highlight class="normal"><sp/>os</highlight></codeline>
+<codeline lineno="2"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>sys</highlight></codeline>
+<codeline lineno="3"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>argparse</highlight></codeline>
+<codeline lineno="4"><highlight class="normal"></highlight></codeline>
+<codeline lineno="5"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1ui__utils" kindref="compound">penify_hook.ui_utils</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>print_info,<sp/>print_warning</highlight></codeline>
+<codeline lineno="6"><highlight class="normal"></highlight></codeline>
+<codeline lineno="7"><highlight class="normal"></highlight></codeline>
+<codeline lineno="8" refid="namespacepenify__hook_1_1commands_1_1commit__commands_1a62564c4e8ad59fc46d56cb0f9122a71a" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1commands_1_1commit__commands_1a62564c4e8ad59fc46d56cb0f9122a71a" kindref="member">commit_code</ref>(api_url,<sp/>token,<sp/>message,<sp/>open_terminal,<sp/>generate_description,</highlight></codeline>
+<codeline lineno="9"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>llm_model=None,<sp/>llm_api_base=None,<sp/>llm_api_key=None,</highlight></codeline>
+<codeline lineno="10"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_url=None,<sp/>jira_user=None,<sp/>jira_api_token=None):</highlight></codeline>
+<codeline lineno="11"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Enhance<sp/>Git<sp/>commits<sp/>with<sp/>AI-powered<sp/>commit<sp/>messages.</highlight></codeline>
+<codeline lineno="12"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="13"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>allows<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>generation<sp/>of<sp/>enhanced<sp/>commit<sp/>messages</highlight></codeline>
+<codeline lineno="14"><highlight class="normal"><sp/><sp/><sp/><sp/>using<sp/>natural<sp/>language<sp/>processing<sp/>models<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>optionally<sp/>integrates<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="15"><highlight class="normal"><sp/><sp/><sp/><sp/>JIRA<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>additional<sp/>context.<sp/>It<sp/>processes<sp/>the<sp/>current<sp/>Git<sp/>folder<sp/>to<sp/>find</highlight></codeline>
+<codeline lineno="16"><highlight class="normal"><sp/><sp/><sp/><sp/>relevant<sp/>files<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>generates<sp/>a<sp/>detailed<sp/>commit<sp/>message<sp/>based<sp/>on<sp/>the</highlight></codeline>
+<codeline lineno="17"><highlight class="normal"><sp/><sp/><sp/><sp/>provided<sp/>parameters.</highlight></codeline>
+<codeline lineno="18"><highlight class="normal"></highlight></codeline>
+<codeline lineno="19"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="20"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_url<sp/>(str):<sp/>URL<sp/>of<sp/>the<sp/>API<sp/>endpoint.</highlight></codeline>
+<codeline lineno="21"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>token<sp/>(str):<sp/>Authentication<sp/>token<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>API.</highlight></codeline>
+<codeline lineno="22"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>message<sp/>(str):<sp/>Initial<sp/>commit<sp/>message<sp/>provided<sp/>by<sp/>the<sp/>user.</highlight></codeline>
+<codeline lineno="23"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>open_terminal<sp/>(bool):<sp/>Whether<sp/>to<sp/>open<sp/>the<sp/>terminal<sp/>after<sp/>committing.</highlight></codeline>
+<codeline lineno="24"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>generate_description<sp/>(bool):<sp/>Whether<sp/>to<sp/>generate<sp/>a<sp/>detailed<sp/>description<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the<sp/>commit<sp/>message.</highlight></codeline>
+<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>llm_model<sp/>(str?):<sp/>The<sp/>language<sp/>model<sp/>to<sp/>use<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>generating<sp/>the<sp/>commit<sp/>message.<sp/>Defaults<sp/>to</highlight></codeline>
+<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">.</highlight></codeline>
+<codeline lineno="27"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>llm_api_base<sp/>(str?):<sp/>Base<sp/>URL<sp/>of<sp/>the<sp/>LLM<sp/>API.<sp/>Defaults<sp/>to<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">.</highlight></codeline>
+<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>llm_api_key<sp/>(str?):<sp/>API<sp/>key<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>accessing<sp/>the<sp/>LLM<sp/>service.<sp/>Defaults<sp/>to<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">.</highlight></codeline>
+<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_url<sp/>(str?):<sp/>URL<sp/>of<sp/>the<sp/>JIRA<sp/>instance.<sp/>Defaults<sp/>to<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">.</highlight></codeline>
+<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_user<sp/>(str?):<sp/>Username<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>authenticating<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>JIRA.<sp/>Defaults<sp/>to<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">.</highlight></codeline>
+<codeline lineno="31"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_api_token<sp/>(str?):<sp/>API<sp/>token<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>accessing<sp/>JIRA.<sp/>Defaults<sp/>to<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">.</highlight></codeline>
+<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="33"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="34"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1ui__utils" kindref="compound">penify_hook.ui_utils</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>print_error</highlight></codeline>
+<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1utils" kindref="compound">penify_hook.utils</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>recursive_search_git_folder</highlight></codeline>
+<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>..commit_analyzer<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>CommitDocGenHook</highlight></codeline>
+<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>..api_client<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>APIClient</highlight></codeline>
+<codeline lineno="38"><highlight class="normal"></highlight></codeline>
+<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Try<sp/>importing<sp/>optional<sp/>dependencies</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>..llm_client<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>LLMClient</highlight></codeline>
+<codeline lineno="42"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>ImportError:</highlight></codeline>
+<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>LLMClient<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="44"><highlight class="normal"></highlight></codeline>
+<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>..jira_client<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>JiraClient</highlight></codeline>
+<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>ImportError:</highlight></codeline>
+<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>JiraClient<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Create<sp/>API<sp/>client</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/>api_client<sp/>=<sp/>APIClient(api_url,<sp/>token)</highlight></codeline>
+<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Initialize<sp/>LLM<sp/>client<sp/>if<sp/>LLM<sp/>parameters<sp/>are<sp/>provided<sp/>and<sp/>LLMClient<sp/>is<sp/>available</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/>llm_client<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>LLMClient<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>llm_model:</highlight></codeline>
+<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>llm_client<sp/>=<sp/>LLMClient(</highlight></codeline>
+<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>model=llm_model,</highlight></codeline>
+<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_base=llm_api_base,</highlight></codeline>
+<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_key=llm_api_key</highlight></codeline>
+<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>)</highlight></codeline>
+<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" kindref="member">print_info</ref>(f</highlight><highlight class="stringliteral">&quot;Using<sp/>LLM<sp/>model:<sp/>{llm_model}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a6f0acd7dd91abfe67d0807803bc3b65f" kindref="member">print_error</ref>(f</highlight><highlight class="stringliteral">&quot;Error<sp/>initializing<sp/>LLM<sp/>client:<sp/>{e}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a6f0acd7dd91abfe67d0807803bc3b65f" kindref="member">print_error</ref>(</highlight><highlight class="stringliteral">&quot;Falling<sp/>back<sp/>to<sp/>API<sp/>for<sp/>commit<sp/>summary<sp/>generation&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>token:</highlight></codeline>
+<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a6f0acd7dd91abfe67d0807803bc3b65f" kindref="member">print_error</ref>(</highlight><highlight class="stringliteral">&quot;No<sp/>LLM<sp/>model<sp/>or<sp/>API<sp/>token<sp/>provided.<sp/>Please<sp/>provide<sp/>an<sp/>LLM<sp/>model<sp/>or<sp/>API<sp/>token.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Initialize<sp/>JIRA<sp/>client<sp/>if<sp/>parameters<sp/>are<sp/>provided<sp/>and<sp/>JiraClient<sp/>is<sp/>available</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/>jira_client<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>JiraClient<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>jira_url<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>jira_user<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>jira_api_token:</highlight></codeline>
+<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="73"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_client<sp/>=<sp/>JiraClient(</highlight></codeline>
+<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_url=jira_url,</highlight></codeline>
+<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_user=jira_user,</highlight></codeline>
+<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_api_token=jira_api_token</highlight></codeline>
+<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>)</highlight></codeline>
+<codeline lineno="78"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>jira_client.is_connected():</highlight></codeline>
+<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" kindref="member">print_info</ref>(f</highlight><highlight class="stringliteral">&quot;Connected<sp/>to<sp/>JIRA:<sp/>{jira_url}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a1ffbb9671dbe233770268e2dd66a67fa" kindref="member">print_warning</ref>(f</highlight><highlight class="stringliteral">&quot;Failed<sp/>to<sp/>connect<sp/>to<sp/>JIRA:<sp/>{jira_url}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_client<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a1ffbb9671dbe233770268e2dd66a67fa" kindref="member">print_warning</ref>(f</highlight><highlight class="stringliteral">&quot;Error<sp/>initializing<sp/>JIRA<sp/>client:<sp/>{e}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="85"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_client<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="86"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Pass<sp/>the<sp/>LLM<sp/>client<sp/>and<sp/>JIRA<sp/>client<sp/>to<sp/>CommitDocGenHook</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>gf_path<sp/>=<sp/><ref refid="namespacepenify__hook_1_1utils_1a95c3f9c80860d6a2e2d061d2fb660a3f" kindref="member">recursive_search_git_folder</ref>(os.getcwd())</highlight></codeline>
+<codeline lineno="90"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>analyzer<sp/>=<sp/>CommitDocGenHook(gf_path,<sp/>api_client,<sp/>llm_client,<sp/>jira_client)</highlight></codeline>
+<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>analyzer.run(message,<sp/>open_terminal,<sp/>generate_description)</highlight></codeline>
+<codeline lineno="92"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="93"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Error:<sp/>{e}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="94"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>sys.exit(1)</highlight></codeline>
+<codeline lineno="95"><highlight class="normal"></highlight></codeline>
+<codeline lineno="96"><highlight class="normal"></highlight></codeline>
+<codeline lineno="97"><highlight class="normal"></highlight></codeline>
+<codeline lineno="98"><highlight class="normal"></highlight></codeline>
+<codeline lineno="99"><highlight class="normal"></highlight></codeline>
+<codeline lineno="100" refid="namespacepenify__hook_1_1commands_1_1commit__commands_1a8627583116eb78e31a4d3cdc16d2f15c" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1commands_1_1commit__commands_1a8627583116eb78e31a4d3cdc16d2f15c" kindref="member">setup_commit_parser</ref>(parser):</highlight></codeline>
+<codeline lineno="101"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Generates<sp/>a<sp/>parser<sp/>for<sp/>setting<sp/>up<sp/>a<sp/>command<sp/>to<sp/>generate<sp/>smart<sp/>commit</highlight></codeline>
+<codeline lineno="102"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>messages.</highlight></codeline>
+<codeline lineno="103"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="104"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>sets<sp/>up<sp/>an<sp/>argument<sp/>parser<sp/>that<sp/>can<sp/>be<sp/>used<sp/>to<sp/>generate</highlight></codeline>
+<codeline lineno="105"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>commit<sp/>messages<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>contextual<sp/>information.<sp/>It<sp/>allows<sp/>users<sp/>to<sp/>specify</highlight></codeline>
+<codeline lineno="106"><highlight class="normal"><sp/><sp/><sp/><sp/>options<sp/>such<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>including<sp/>a<sp/>message,<sp/>opening<sp/>an<sp/>edit<sp/>terminal<sp/>before</highlight></codeline>
+<codeline lineno="107"><highlight class="normal"><sp/><sp/><sp/><sp/>committing,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>generating<sp/>a<sp/>detailed<sp/>commit<sp/>message.</highlight></codeline>
+<codeline lineno="108"><highlight class="normal"></highlight></codeline>
+<codeline lineno="109"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="110"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>parser<sp/>(argparse.ArgumentParser):<sp/>The<sp/>ArgumentParser<sp/>object<sp/>to<sp/>be<sp/>configured.</highlight></codeline>
+<codeline lineno="111"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="112"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="113"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>commit_parser_description<sp/>=<sp/>&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="114"><highlight class="stringliteral">It<sp/>generates<sp/>smart<sp/>commit<sp/>messages.<sp/>By<sp/>default,<sp/>it<sp/>will<sp/>just<sp/>generate<sp/>just<sp/>the<sp/>Title<sp/>of<sp/>the<sp/>commit<sp/>message.</highlight></codeline>
+<codeline lineno="115"><highlight class="stringliteral">1.<sp/>If<sp/>you<sp/>have<sp/>not<sp/>configured<sp/>LLM,<sp/>it<sp/>will<sp/>give<sp/>an<sp/>error.<sp/>You<sp/>either<sp/>need<sp/>to<sp/>configure<sp/>LLM<sp/>or<sp/>use<sp/>the<sp/>API<sp/>key.</highlight></codeline>
+<codeline lineno="116"><highlight class="stringliteral">2.<sp/>If<sp/>you<sp/>have<sp/>not<sp/>configured<sp/>JIRA.<sp/>It<sp/>will<sp/>not<sp/>enhance<sp/>the<sp/>commit<sp/>message<sp/>with<sp/>JIRA<sp/>issue<sp/>details.</highlight></codeline>
+<codeline lineno="117"><highlight class="stringliteral">3.<sp/>For<sp/>more<sp/>information,<sp/>visit<sp/>https://penify.wiki/dcsgc1</highlight></codeline>
+<codeline lineno="118"><highlight class="stringliteral">&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="119"><highlight class="normal"><sp/><sp/><sp/><sp/>parser.help<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;Generate<sp/>smart<sp/>commit<sp/>messages<sp/>using<sp/>local-LLM(no<sp/>login<sp/>required).&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="120"><highlight class="normal"><sp/><sp/><sp/><sp/>parser.description<sp/>=<sp/>commit_parser_description</highlight></codeline>
+<codeline lineno="121"><highlight class="normal"><sp/><sp/><sp/><sp/>parser.formatter_class<sp/>=<sp/>argparse.RawDescriptionHelpFormatter</highlight></codeline>
+<codeline lineno="122"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="123"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Add<sp/>the<sp/>message<sp/>argument<sp/>with<sp/>better<sp/>help</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="124"><highlight class="normal"><sp/><sp/><sp/><sp/>parser.add_argument(</highlight><highlight class="stringliteral">&quot;-m&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;--message&quot;</highlight><highlight class="normal">,<sp/>required=</highlight><highlight class="keyword">False</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;Commit<sp/>with<sp/>contextual<sp/>commit<sp/>message.&quot;</highlight><highlight class="normal">,<sp/>default=</highlight><highlight class="stringliteral">&quot;N/A&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="125"><highlight class="normal"><sp/><sp/><sp/><sp/>parser.add_argument(</highlight><highlight class="stringliteral">&quot;-e&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;--terminal&quot;</highlight><highlight class="normal">,<sp/>action=</highlight><highlight class="stringliteral">&quot;store_true&quot;</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;Open<sp/>edit<sp/>terminal<sp/>before<sp/>committing.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="126"><highlight class="normal"><sp/><sp/><sp/><sp/>parser.add_argument(</highlight><highlight class="stringliteral">&quot;-d&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;--description&quot;</highlight><highlight class="normal">,<sp/>action=</highlight><highlight class="stringliteral">&quot;store_false&quot;</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;It<sp/>will<sp/>generate<sp/>commit<sp/>message<sp/>with<sp/>title<sp/>and<sp/>description.&quot;</highlight><highlight class="normal">,<sp/>default=</highlight><highlight class="keyword">False</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="127"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="128" refid="namespacepenify__hook_1_1commands_1_1commit__commands_1af4f739f524c38b437e4e47673d683e23" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1commands_1_1commit__commands_1af4f739f524c38b437e4e47673d683e23" kindref="member">handle_commit</ref>(args):</highlight></codeline>
+<codeline lineno="129"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Handle<sp/>the<sp/>commit<sp/>functionality<sp/>by<sp/>processing<sp/>arguments<sp/>and<sp/>invoking<sp/>the</highlight></codeline>
+<codeline lineno="130"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>appropriate<sp/>commands.</highlight></codeline>
+<codeline lineno="131"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="132"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>processes<sp/>the<sp/>provided<sp/>command-line<sp/>arguments<sp/>to<sp/>configure</highlight></codeline>
+<codeline lineno="133"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>settings<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>commit<sp/>operations,<sp/>including<sp/>LLM<sp/>(Language<sp/>Model)<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>Jira</highlight></codeline>
+<codeline lineno="134"><highlight class="normal"><sp/><sp/><sp/><sp/>configurations.<sp/>It<sp/>then<sp/>calls<sp/>the<sp/>`commit_code`<sp/>function<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>these</highlight></codeline>
+<codeline lineno="135"><highlight class="normal"><sp/><sp/><sp/><sp/>configurations<sp/>to<sp/>perform<sp/>the<sp/>actual<sp/>commit<sp/>operation.</highlight></codeline>
+<codeline lineno="136"><highlight class="normal"></highlight></codeline>
+<codeline lineno="137"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="138"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>args<sp/>(argparse.Namespace):<sp/>The<sp/>parsed<sp/>command-line<sp/>arguments<sp/>containing<sp/>options<sp/>like<sp/>terminal,</highlight></codeline>
+<codeline lineno="139"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>description,<sp/>message,<sp/>etc.</highlight></codeline>
+<codeline lineno="140"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="141"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="142"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1commands_1_1commit__commands" kindref="compound">penify_hook.commands.commit_commands</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>commit_code</highlight></codeline>
+<codeline lineno="143"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands" kindref="compound">penify_hook.commands.config_commands</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>get_jira_config,<sp/>get_llm_config,<sp/>get_token</highlight></codeline>
+<codeline lineno="144"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1constants" kindref="compound">penify_hook.constants</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>API_URL</highlight></codeline>
+<codeline lineno="145"><highlight class="normal"></highlight></codeline>
+<codeline lineno="146"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Only<sp/>import<sp/>dependencies<sp/>needed<sp/>for<sp/>commit<sp/>functionality<sp/>here</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="147"><highlight class="normal"><sp/><sp/><sp/><sp/>open_terminal<sp/>=<sp/>args.terminal</highlight></codeline>
+<codeline lineno="148"><highlight class="normal"><sp/><sp/><sp/><sp/>generate_description<sp/>=<sp/>args.description</highlight></codeline>
+<codeline lineno="149"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" kindref="member">print_info</ref>(f</highlight><highlight class="stringliteral">&quot;Generate<sp/>Commit<sp/>Description:<sp/>{generate_description}&quot;</highlight><highlight class="normal">)<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="150"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Try<sp/>to<sp/>get<sp/>from<sp/>config</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="151"><highlight class="normal"><sp/><sp/><sp/><sp/>llm_config<sp/>=<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a6492bc8e7df6e38bb06ad05e572d4cc0" kindref="member">get_llm_config</ref>()</highlight></codeline>
+<codeline lineno="152"><highlight class="normal"><sp/><sp/><sp/><sp/>llm_model<sp/>=<sp/>llm_config.get(</highlight><highlight class="stringliteral">&apos;model&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="153"><highlight class="normal"><sp/><sp/><sp/><sp/>llm_api_base<sp/>=<sp/>llm_config.get(</highlight><highlight class="stringliteral">&apos;api_base&apos;</highlight><highlight class="normal">)<sp/></highlight></codeline>
+<codeline lineno="154"><highlight class="normal"><sp/><sp/><sp/><sp/>llm_api_key<sp/>=<sp/>llm_config.get(</highlight><highlight class="stringliteral">&apos;api_key&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="155"><highlight class="normal"><sp/><sp/><sp/><sp/>token<sp/>=<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a5503d51c905e2f1b299b12d2a73bd812" kindref="member">get_token</ref>()</highlight></codeline>
+<codeline lineno="156"><highlight class="normal"></highlight></codeline>
+<codeline lineno="157"><highlight class="normal"></highlight></codeline>
+<codeline lineno="158"><highlight class="normal"></highlight></codeline>
+<codeline lineno="159"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Try<sp/>to<sp/>get<sp/>from<sp/>config</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="160"><highlight class="normal"><sp/><sp/><sp/><sp/>jira_config<sp/>=<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a15bf3685c4dcb5c15ba6a4055e484cf2" kindref="member">get_jira_config</ref>()</highlight></codeline>
+<codeline lineno="161"><highlight class="normal"><sp/><sp/><sp/><sp/>jira_url<sp/>=<sp/>jira_config.get(</highlight><highlight class="stringliteral">&apos;url&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="162"><highlight class="normal"><sp/><sp/><sp/><sp/>jira_user<sp/>=<sp/>jira_config.get(</highlight><highlight class="stringliteral">&apos;username&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="163"><highlight class="normal"><sp/><sp/><sp/><sp/>jira_api_token<sp/>=<sp/>jira_config.get(</highlight><highlight class="stringliteral">&apos;api_token&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="164"><highlight class="normal"></highlight></codeline>
+<codeline lineno="165"><highlight class="normal"></highlight></codeline>
+<codeline lineno="166"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1commit__commands_1a62564c4e8ad59fc46d56cb0f9122a71a" kindref="member">commit_code</ref>(API_URL,<sp/>token,<sp/>args.message,<sp/>open_terminal,<sp/>generate_description,</highlight></codeline>
+<codeline lineno="167"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>llm_model,<sp/>llm_api_base,<sp/>llm_api_key,</highlight></codeline>
+<codeline lineno="168"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_url,<sp/>jira_user,<sp/>jira_api_token)</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/commit_commands.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/compound.xsd b/docs345/xml/compound.xsd
new file mode 100644
index 0000000..e0ffe43
--- /dev/null
+++ b/docs345/xml/compound.xsd
@@ -0,0 +1,1290 @@
+<?xml version='1.0' encoding='utf-8' ?>
+<xsd:schema xmlns:xsd="http://www.w3.org/2001/XMLSchema">
+  <xsd:import namespace="http://www.w3.org/XML/1998/namespace" schemaLocation="xml.xsd"/>
+
+  <xsd:element name="doxygen" type="DoxygenType"/>
+
+  <!-- Complex types -->
+
+  <xsd:complexType name="DoxygenType">
+    <xsd:sequence maxOccurs="unbounded">
+      <xsd:element name="compounddef" type="compounddefType" minOccurs="0" />
+    </xsd:sequence>
+    <xsd:attribute name="version" type="DoxVersionNumber" use="required" />
+    <xsd:attribute ref="xml:lang" use="required"/>
+  </xsd:complexType>
+
+  <xsd:complexType name="compounddefType">
+    <xsd:sequence>
+      <xsd:element name="compoundname" type="xsd:string"/>
+      <xsd:element name="title" type="xsd:string" minOccurs="0" />
+      <xsd:element name="basecompoundref" type="compoundRefType" minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="derivedcompoundref" type="compoundRefType" minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="includes" type="incType" minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="includedby" type="incType" minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="incdepgraph" type="graphType" minOccurs="0" />
+      <xsd:element name="invincdepgraph" type="graphType" minOccurs="0" />
+      <xsd:element name="innerdir" type="refType" minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="innerfile" type="refType" minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="innerclass" type="refType" minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="innernamespace" type="refType" minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="innerpage" type="refType" minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="innergroup" type="refType" minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="templateparamlist" type="templateparamlistType" minOccurs="0" />
+      <xsd:element name="sectiondef" type="sectiondefType" minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="tableofcontents" type="tableofcontentsType" minOccurs="0" maxOccurs="1" />
+      <xsd:element name="requiresclause" type="linkedTextType" minOccurs="0" />
+      <xsd:element name="initializer" type="linkedTextType" minOccurs="0" />
+      <xsd:element name="briefdescription" type="descriptionType" minOccurs="0" />
+      <xsd:element name="detaileddescription" type="descriptionType" minOccurs="0" />
+      <xsd:element name="inheritancegraph" type="graphType" minOccurs="0" />
+      <xsd:element name="collaborationgraph" type="graphType" minOccurs="0" />
+      <xsd:element name="programlisting" type="listingType" minOccurs="0" />
+      <xsd:element name="location" type="locationType" minOccurs="0" />
+      <xsd:element name="listofallmembers" type="listofallmembersType" minOccurs="0" />
+    </xsd:sequence>
+    <xsd:attribute name="id" type="xsd:string" />
+    <xsd:attribute name="kind" type="DoxCompoundKind" />
+    <xsd:attribute name="language" type="DoxLanguage" use="optional"/>
+    <xsd:attribute name="prot" type="DoxProtectionKind" />
+    <xsd:attribute name="final" type="DoxBool" use="optional"/>
+    <xsd:attribute name="inline" type="DoxBool" use="optional"/>
+    <xsd:attribute name="sealed" type="DoxBool" use="optional"/>
+    <xsd:attribute name="abstract" type="DoxBool" use="optional"/>
+  </xsd:complexType>
+
+  <xsd:complexType name="listofallmembersType">
+    <xsd:sequence>
+      <xsd:element name="member" type="memberRefType" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+  </xsd:complexType>
+
+  <xsd:complexType name="memberRefType">
+    <xsd:sequence>
+      <xsd:element name="scope" />
+      <xsd:element name="name" />
+    </xsd:sequence>
+    <xsd:attribute name="refid" type="xsd:string" />
+    <xsd:attribute name="prot" type="DoxProtectionKind" />
+    <xsd:attribute name="virt" type="DoxVirtualKind" />
+    <xsd:attribute name="ambiguityscope" type="xsd:string" />
+  </xsd:complexType>
+
+  <xsd:complexType name="docHtmlOnlyType">
+    <xsd:simpleContent>
+      <xsd:extension base="xsd:string">
+        <xsd:attribute name="block" type="xsd:string" />
+      </xsd:extension>
+    </xsd:simpleContent>
+  </xsd:complexType>
+
+  <xsd:complexType name="compoundRefType">
+    <xsd:simpleContent>
+      <xsd:extension base="xsd:string">
+        <xsd:attribute name="refid" type="xsd:string" use="optional" />
+        <xsd:attribute name="prot" type="DoxProtectionKind" />
+        <xsd:attribute name="virt" type="DoxVirtualKind" />
+      </xsd:extension>
+    </xsd:simpleContent>
+  </xsd:complexType>
+
+  <xsd:complexType name="reimplementType">
+    <xsd:simpleContent>
+      <xsd:extension base="xsd:string">
+        <xsd:attribute name="refid" type="xsd:string" />
+      </xsd:extension>
+    </xsd:simpleContent>
+  </xsd:complexType>
+
+  <xsd:complexType name="incType">
+    <xsd:simpleContent>
+      <xsd:extension base="xsd:string">
+        <xsd:attribute name="refid" type="xsd:string" />
+        <xsd:attribute name="local" type="DoxBool" />
+      </xsd:extension>
+    </xsd:simpleContent>
+  </xsd:complexType>
+
+  <xsd:complexType name="refType">
+    <xsd:simpleContent>
+      <xsd:extension base="xsd:string">
+        <xsd:attribute name="refid" type="xsd:string" />
+        <xsd:attribute name="prot" type="DoxProtectionKind" use="optional"/>
+        <xsd:attribute name="inline" type="DoxBool" use="optional"/>
+      </xsd:extension>
+    </xsd:simpleContent>
+  </xsd:complexType>
+
+  <xsd:complexType name="refTextType">
+    <xsd:simpleContent>
+      <xsd:extension base="xsd:string">
+       <xsd:attribute name="refid" type="xsd:string" />
+       <xsd:attribute name="kindref" type="DoxRefKind" />
+       <xsd:attribute name="external" type="xsd:string" use="optional"/>
+       <xsd:attribute name="tooltip" type="xsd:string" use="optional"/>
+      </xsd:extension>
+    </xsd:simpleContent>
+  </xsd:complexType>
+
+  <xsd:complexType name="sectiondefType">
+    <xsd:sequence>
+      <xsd:element name="header" type="xsd:string" minOccurs="0" />
+      <xsd:element name="description" type="descriptionType" minOccurs="0" />
+      <xsd:element name="memberdef" type="memberdefType" maxOccurs="unbounded" />
+    </xsd:sequence>
+    <xsd:attribute name="kind" type="DoxSectionKind" />
+  </xsd:complexType>
+
+  <xsd:complexType name="memberdefType">
+    <xsd:sequence>
+      <xsd:element name="templateparamlist" type="templateparamlistType" minOccurs="0" />
+      <xsd:element name="type" type="linkedTextType" minOccurs="0" />
+      <xsd:element name="definition" minOccurs="0" />
+      <xsd:element name="argsstring" minOccurs="0" />
+      <xsd:element name="name" />
+      <xsd:element name="qualifiedname" minOccurs="0"/>
+      <xsd:element name="read" minOccurs="0" />
+      <xsd:element name="write" minOccurs="0" />
+      <xsd:element name="bitfield" minOccurs="0" />
+      <xsd:element name="reimplements" type="reimplementType" minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="reimplementedby" type="reimplementType" minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="param" type="paramType" minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="enumvalue" type="enumvalueType" minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="requiresclause" type="linkedTextType" minOccurs="0" />
+      <xsd:element name="initializer" type="linkedTextType" minOccurs="0" />
+      <xsd:element name="exceptions" type="linkedTextType" minOccurs="0" />
+      <xsd:element name="briefdescription" type="descriptionType" minOccurs="0" />
+      <xsd:element name="detaileddescription" type="descriptionType" minOccurs="0" />
+      <xsd:element name="inbodydescription" type="descriptionType" minOccurs="0" />
+      <xsd:element name="location" type="locationType" />
+      <xsd:element name="references" type="referenceType" minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="referencedby" type="referenceType" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+    <xsd:attribute name="kind" type="DoxMemberKind" />
+    <xsd:attribute name="id" type="xsd:string" />
+    <xsd:attribute name="prot" type="DoxProtectionKind" />
+    <xsd:attribute name="static" type="DoxBool" />
+    <xsd:attribute name="strong" type="DoxBool" use="optional"/>
+    <xsd:attribute name="const" type="DoxBool" use="optional"/>
+    <xsd:attribute name="explicit" type="DoxBool" use="optional"/>
+    <xsd:attribute name="inline" type="DoxBool" use="optional"/>
+    <xsd:attribute name="refqual" type="DoxRefQualifierKind" use="optional"/>
+    <xsd:attribute name="virt" type="DoxVirtualKind" use="optional"/>
+    <xsd:attribute name="volatile" type="DoxBool" use="optional"/>
+    <xsd:attribute name="mutable" type="DoxBool" use="optional"/>
+    <xsd:attribute name="noexcept" type="DoxBool" use="optional"/>
+    <xsd:attribute name="constexpr" type="DoxBool" use="optional"/>
+    <!-- Qt property -->
+    <xsd:attribute name="readable" type="DoxBool" use="optional"/>
+    <xsd:attribute name="writable" type="DoxBool" use="optional"/>
+    <!-- C++/CLI variable -->
+    <xsd:attribute name="initonly" type="DoxBool" use="optional"/>
+    <!-- C++/CLI and C# property -->
+    <xsd:attribute name="settable" type="DoxBool" use="optional"/>
+    <xsd:attribute name="privatesettable" type="DoxBool" use="optional"/>
+    <xsd:attribute name="protectedsettable" type="DoxBool" use="optional"/>
+    <xsd:attribute name="gettable" type="DoxBool" use="optional"/>
+    <xsd:attribute name="privategettable" type="DoxBool" use="optional"/>
+    <xsd:attribute name="protectedgettable" type="DoxBool" use="optional"/>
+    <!-- C++/CLI function -->
+    <xsd:attribute name="final" type="DoxBool" use="optional"/>
+    <xsd:attribute name="sealed" type="DoxBool" use="optional"/>
+    <xsd:attribute name="new" type="DoxBool" use="optional"/>
+    <!-- C++/CLI event -->
+    <xsd:attribute name="add" type="DoxBool" use="optional"/>
+    <xsd:attribute name="remove" type="DoxBool" use="optional"/>
+    <xsd:attribute name="raise" type="DoxBool" use="optional"/>
+    <!-- Objective-C 2.0 protocol method -->
+    <xsd:attribute name="optional" type="DoxBool" use="optional"/>
+    <xsd:attribute name="required" type="DoxBool" use="optional"/>
+    <!-- Objective-C 2.0 property accessor -->
+    <xsd:attribute name="accessor" type="DoxAccessor" use="optional"/>
+    <!-- UNO IDL -->
+    <xsd:attribute name="attribute" type="DoxBool" use="optional"/>
+    <xsd:attribute name="property" type="DoxBool" use="optional"/>
+    <xsd:attribute name="readonly" type="DoxBool" use="optional"/>
+    <xsd:attribute name="bound" type="DoxBool" use="optional"/>
+    <xsd:attribute name="removable" type="DoxBool" use="optional"/>
+    <xsd:attribute name="constrained" type="DoxBool" use="optional"/>
+    <xsd:attribute name="transient" type="DoxBool" use="optional"/>
+    <xsd:attribute name="maybevoid" type="DoxBool" use="optional"/>
+    <xsd:attribute name="maybedefault" type="DoxBool" use="optional"/>
+    <xsd:attribute name="maybeambiguous" type="DoxBool" use="optional"/>
+
+  </xsd:complexType>
+
+  <xsd:complexType name="descriptionType" mixed="true">
+    <xsd:sequence>
+      <xsd:element name="title" type="xsd:string" minOccurs="0"/>	    
+      <xsd:element name="para" type="docParaType" minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="internal" type="docInternalType" minOccurs="0" maxOccurs="unbounded"/>
+      <xsd:element name="sect1" type="docSect1Type" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+  </xsd:complexType>
+
+  <xsd:complexType name="enumvalueType" mixed="true">
+    <xsd:sequence>
+      <xsd:element name="name" />
+      <xsd:element name="initializer" type="linkedTextType" minOccurs="0" />
+      <xsd:element name="briefdescription" type="descriptionType" minOccurs="0" />
+      <xsd:element name="detaileddescription" type="descriptionType" minOccurs="0" />
+    </xsd:sequence>
+    <xsd:attribute name="id" type="xsd:string" />
+    <xsd:attribute name="prot" type="DoxProtectionKind" />
+  </xsd:complexType>
+
+  <xsd:complexType name="templateparamlistType">
+    <xsd:sequence>
+      <xsd:element name="param" type="paramType" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+  </xsd:complexType>
+
+  <xsd:complexType name="paramType">
+    <xsd:sequence>
+      <xsd:element name="attributes" minOccurs="0" />
+      <xsd:element name="type" type="linkedTextType" minOccurs="0" />
+      <xsd:element name="declname" minOccurs="0" />
+      <xsd:element name="defname" minOccurs="0" />
+      <xsd:element name="array" minOccurs="0" />
+      <xsd:element name="defval" type="linkedTextType" minOccurs="0" />
+      <xsd:element name="typeconstraint" type="linkedTextType" minOccurs="0" />
+      <xsd:element name="briefdescription" type="descriptionType" minOccurs="0" />
+    </xsd:sequence>
+  </xsd:complexType>
+
+  <xsd:complexType name="linkedTextType" mixed="true">
+    <xsd:sequence>
+    <xsd:element name="ref" type="refTextType" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+  </xsd:complexType>
+
+  <xsd:complexType name="graphType">
+    <xsd:sequence>
+      <xsd:element name="node" type="nodeType" maxOccurs="unbounded" />
+    </xsd:sequence>
+  </xsd:complexType>
+
+  <xsd:complexType name="nodeType">
+    <xsd:sequence>
+      <xsd:element name="label" />
+      <xsd:element name="link" type="linkType" minOccurs="0" />
+      <xsd:element name="childnode" type="childnodeType" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+    <xsd:attribute name="id" type="xsd:string" />
+  </xsd:complexType>
+
+  <xsd:complexType name="childnodeType">
+    <xsd:sequence>
+      <xsd:element name="edgelabel" minOccurs="0" maxOccurs="unbounded"/>
+    </xsd:sequence>
+    <xsd:attribute name="refid" type="xsd:string" />
+    <xsd:attribute name="relation" type="DoxGraphRelation" />
+  </xsd:complexType>
+
+  <xsd:complexType name="linkType">
+    <xsd:attribute name="refid" type="xsd:string" />
+    <xsd:attribute name="external" type="xsd:string" use="optional"/>
+  </xsd:complexType>
+
+  <xsd:complexType name="listingType">
+    <xsd:sequence>
+      <xsd:element name="codeline" type="codelineType" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+    <xsd:attribute name="filename" type="xsd:string" use="optional"/>
+  </xsd:complexType>
+
+  <xsd:complexType name="codelineType">
+    <xsd:sequence>
+      <xsd:element name="highlight" type="highlightType" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+    <xsd:attribute name="lineno" type="xsd:integer" />
+    <xsd:attribute name="refid" type="xsd:string" />
+    <xsd:attribute name="refkind" type="DoxRefKind" />
+    <xsd:attribute name="external" type="DoxBool" />
+  </xsd:complexType>
+
+  <xsd:complexType name="highlightType" mixed="true">
+    <xsd:choice minOccurs="0" maxOccurs="unbounded">
+      <xsd:element name="sp" type="spType" />
+      <xsd:element name="ref" type="refTextType" />
+    </xsd:choice>
+    <xsd:attribute name="class" type="DoxHighlightClass" />
+  </xsd:complexType>
+
+  <xsd:complexType name="spType" mixed="true">
+    <xsd:attribute name="value" type="xsd:integer" use="optional"/>
+  </xsd:complexType>
+
+  <xsd:complexType name="referenceType" mixed="true">
+    <xsd:attribute name="refid" type="xsd:string" />
+    <xsd:attribute name="compoundref" type="xsd:string" use="optional" />
+    <xsd:attribute name="startline" type="xsd:integer" />
+    <xsd:attribute name="endline" type="xsd:integer" />
+  </xsd:complexType>
+
+  <xsd:complexType name="locationType">
+    <xsd:attribute name="file" type="xsd:string" />
+    <xsd:attribute name="line" type="xsd:integer" />
+    <xsd:attribute name="column" type="xsd:integer" use="optional"/>
+    <xsd:attribute name="declfile" type="xsd:string" use="optional"/>
+    <xsd:attribute name="declline" type="xsd:integer" use="optional"/>
+    <xsd:attribute name="declcolumn" type="xsd:integer" use="optional"/>
+    <xsd:attribute name="bodyfile" type="xsd:string" />
+    <xsd:attribute name="bodystart" type="xsd:integer" />
+    <xsd:attribute name="bodyend" type="xsd:integer" />
+  </xsd:complexType>
+
+  <xsd:complexType name="docSect1Type" mixed="true">
+    <xsd:sequence>
+      <xsd:element name="title" type="xsd:string" minOccurs="0" />
+      <xsd:choice maxOccurs="unbounded">
+        <xsd:element name="para" type="docParaType" minOccurs="0" maxOccurs="unbounded" />
+        <xsd:element name="internal" type="docInternalS1Type" minOccurs="0"  maxOccurs="unbounded" />
+        <xsd:element name="sect2" type="docSect2Type" minOccurs="0" maxOccurs="unbounded" />
+      </xsd:choice>
+    </xsd:sequence>
+    <xsd:attribute name="id" type="xsd:string" />
+  </xsd:complexType>
+
+  <xsd:complexType name="docSect2Type" mixed="true">
+    <xsd:sequence>
+      <xsd:element name="title" type="xsd:string" />
+      <xsd:choice maxOccurs="unbounded">
+        <xsd:element name="para" type="docParaType" minOccurs="0" maxOccurs="unbounded" />
+        <xsd:element name="sect3" type="docSect3Type" minOccurs="0" maxOccurs="unbounded" />
+        <xsd:element name="internal" type="docInternalS2Type" minOccurs="0" />
+      </xsd:choice>
+    </xsd:sequence>
+    <xsd:attribute name="id" type="xsd:string" />
+  </xsd:complexType>
+
+  <xsd:complexType name="docSect3Type" mixed="true">
+    <xsd:sequence>
+      <xsd:element name="title" type="xsd:string" />
+      <xsd:choice maxOccurs="unbounded">
+        <xsd:element name="para" type="docParaType" minOccurs="0" maxOccurs="unbounded" />
+        <xsd:element name="sect4" type="docSect4Type" minOccurs="0" maxOccurs="unbounded" />
+        <xsd:element name="internal" type="docInternalS3Type" minOccurs="0" />
+      </xsd:choice>
+    </xsd:sequence>
+    <xsd:attribute name="id" type="xsd:string" />
+  </xsd:complexType>
+
+  <xsd:complexType name="docSect4Type" mixed="true">
+    <xsd:sequence>
+      <xsd:element name="title" type="xsd:string" />
+      <xsd:choice maxOccurs="unbounded">
+        <xsd:element name="para" type="docParaType" minOccurs="0" maxOccurs="unbounded" />
+        <xsd:element name="internal" type="docInternalS4Type" minOccurs="0" />
+      </xsd:choice>
+    </xsd:sequence>
+    <xsd:attribute name="id" type="xsd:string" />
+  </xsd:complexType>
+
+  <xsd:complexType name="docInternalType" mixed="true">
+    <xsd:sequence>
+      <xsd:element name="para"  type="docParaType"  minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="sect1" type="docSect1Type" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+  </xsd:complexType>
+
+  <xsd:complexType name="docInternalS1Type" mixed="true">
+    <xsd:sequence>
+      <xsd:element name="para"  type="docParaType"  minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="sect2" type="docSect2Type" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+  </xsd:complexType>
+
+  <xsd:complexType name="docInternalS2Type" mixed="true">
+    <xsd:sequence>
+      <xsd:element name="para"  type="docParaType"  minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="sect3" type="docSect3Type" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+  </xsd:complexType>
+
+  <xsd:complexType name="docInternalS3Type" mixed="true">
+    <xsd:sequence>
+      <xsd:element name="para"  type="docParaType"  minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="sect3" type="docSect4Type" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+  </xsd:complexType>
+
+  <xsd:complexType name="docInternalS4Type" mixed="true">
+    <xsd:sequence>
+      <xsd:element name="para"  type="docParaType"  minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+  </xsd:complexType>
+ 
+  <xsd:group name="docTitleCmdGroup">
+    <xsd:choice>
+      <xsd:element name="ulink" type="docURLLink" />
+      <xsd:element name="bold" type="docMarkupType" />
+      <xsd:element name="s" type="docMarkupType" />
+      <xsd:element name="strike" type="docMarkupType" />
+      <xsd:element name="underline" type="docMarkupType" />
+      <xsd:element name="emphasis" type="docMarkupType" />
+      <xsd:element name="computeroutput" type="docMarkupType" />
+      <xsd:element name="subscript" type="docMarkupType" />
+      <xsd:element name="superscript" type="docMarkupType" />
+      <xsd:element name="center" type="docMarkupType" />
+      <xsd:element name="small" type="docMarkupType" />
+      <xsd:element name="cite" type="docMarkupType" />
+      <xsd:element name="del" type="docMarkupType" />
+      <xsd:element name="ins" type="docMarkupType" />
+      <xsd:element name="details" type="docMarkupType" />
+      <xsd:element name="summary" type="docMarkupType" />
+      <xsd:element name="htmlonly" type="docHtmlOnlyType" />
+      <xsd:element name="manonly" type="xsd:string" />
+      <xsd:element name="xmlonly" type="xsd:string" />
+      <xsd:element name="rtfonly" type="xsd:string" />
+      <xsd:element name="latexonly" type="xsd:string" />
+      <xsd:element name="docbookonly" type="xsd:string" />
+      <xsd:element name="image" type="docImageType" />
+      <xsd:element name="dot" type="docDotMscType" />
+      <xsd:element name="msc" type="docDotMscType" />
+      <xsd:element name="plantuml" type="docPlantumlType" />
+      <xsd:element name="anchor" type="docAnchorType" />
+      <xsd:element name="formula" type="docFormulaType" />
+      <xsd:element name="ref" type="docRefTextType" />
+      <xsd:element name="emoji" type="docEmojiType" />
+      <xsd:element name="linebreak" type="docEmptyType" />
+      <xsd:element name="nonbreakablespace" type="docEmptyType" />
+      <xsd:element name="iexcl" type="docEmptyType" />
+      <xsd:element name="cent" type="docEmptyType" />
+      <xsd:element name="pound" type="docEmptyType" />
+      <xsd:element name="curren" type="docEmptyType" />
+      <xsd:element name="yen" type="docEmptyType" />
+      <xsd:element name="brvbar" type="docEmptyType" />
+      <xsd:element name="sect" type="docEmptyType" />
+      <xsd:element name="umlaut" type="docEmptyType" />
+      <xsd:element name="copy" type="docEmptyType" />
+      <xsd:element name="ordf" type="docEmptyType" />
+      <xsd:element name="laquo" type="docEmptyType" />
+      <xsd:element name="not" type="docEmptyType" />
+      <xsd:element name="shy" type="docEmptyType" />
+      <xsd:element name="registered" type="docEmptyType" />
+      <xsd:element name="macr" type="docEmptyType" />
+      <xsd:element name="deg" type="docEmptyType" />
+      <xsd:element name="plusmn" type="docEmptyType" />
+      <xsd:element name="sup2" type="docEmptyType" />
+      <xsd:element name="sup3" type="docEmptyType" />
+      <xsd:element name="acute" type="docEmptyType" />
+      <xsd:element name="micro" type="docEmptyType" />
+      <xsd:element name="para" type="docEmptyType" />
+      <xsd:element name="middot" type="docEmptyType" />
+      <xsd:element name="cedil" type="docEmptyType" />
+      <xsd:element name="sup1" type="docEmptyType" />
+      <xsd:element name="ordm" type="docEmptyType" />
+      <xsd:element name="raquo" type="docEmptyType" />
+      <xsd:element name="frac14" type="docEmptyType" />
+      <xsd:element name="frac12" type="docEmptyType" />
+      <xsd:element name="frac34" type="docEmptyType" />
+      <xsd:element name="iquest" type="docEmptyType" />
+      <xsd:element name="Agrave" type="docEmptyType" />
+      <xsd:element name="Aacute" type="docEmptyType" />
+      <xsd:element name="Acirc" type="docEmptyType" />
+      <xsd:element name="Atilde" type="docEmptyType" />
+      <xsd:element name="Aumlaut" type="docEmptyType" />
+      <xsd:element name="Aring" type="docEmptyType" />
+      <xsd:element name="AElig" type="docEmptyType" />
+      <xsd:element name="Ccedil" type="docEmptyType" />
+      <xsd:element name="Egrave" type="docEmptyType" />
+      <xsd:element name="Eacute" type="docEmptyType" />
+      <xsd:element name="Ecirc" type="docEmptyType" />
+      <xsd:element name="Eumlaut" type="docEmptyType" />
+      <xsd:element name="Igrave" type="docEmptyType" />
+      <xsd:element name="Iacute" type="docEmptyType" />
+      <xsd:element name="Icirc" type="docEmptyType" />
+      <xsd:element name="Iumlaut" type="docEmptyType" />
+      <xsd:element name="ETH" type="docEmptyType" />
+      <xsd:element name="Ntilde" type="docEmptyType" />
+      <xsd:element name="Ograve" type="docEmptyType" />
+      <xsd:element name="Oacute" type="docEmptyType" />
+      <xsd:element name="Ocirc" type="docEmptyType" />
+      <xsd:element name="Otilde" type="docEmptyType" />
+      <xsd:element name="Oumlaut" type="docEmptyType" />
+      <xsd:element name="times" type="docEmptyType" />
+      <xsd:element name="Oslash" type="docEmptyType" />
+      <xsd:element name="Ugrave" type="docEmptyType" />
+      <xsd:element name="Uacute" type="docEmptyType" />
+      <xsd:element name="Ucirc" type="docEmptyType" />
+      <xsd:element name="Uumlaut" type="docEmptyType" />
+      <xsd:element name="Yacute" type="docEmptyType" />
+      <xsd:element name="THORN" type="docEmptyType" />
+      <xsd:element name="szlig" type="docEmptyType" />
+      <xsd:element name="agrave" type="docEmptyType" />
+      <xsd:element name="aacute" type="docEmptyType" />
+      <xsd:element name="acirc" type="docEmptyType" />
+      <xsd:element name="atilde" type="docEmptyType" />
+      <xsd:element name="aumlaut" type="docEmptyType" />
+      <xsd:element name="aring" type="docEmptyType" />
+      <xsd:element name="aelig" type="docEmptyType" />
+      <xsd:element name="ccedil" type="docEmptyType" />
+      <xsd:element name="egrave" type="docEmptyType" />
+      <xsd:element name="eacute" type="docEmptyType" />
+      <xsd:element name="ecirc" type="docEmptyType" />
+      <xsd:element name="eumlaut" type="docEmptyType" />
+      <xsd:element name="igrave" type="docEmptyType" />
+      <xsd:element name="iacute" type="docEmptyType" />
+      <xsd:element name="icirc" type="docEmptyType" />
+      <xsd:element name="iumlaut" type="docEmptyType" />
+      <xsd:element name="eth" type="docEmptyType" />
+      <xsd:element name="ntilde" type="docEmptyType" />
+      <xsd:element name="ograve" type="docEmptyType" />
+      <xsd:element name="oacute" type="docEmptyType" />
+      <xsd:element name="ocirc" type="docEmptyType" />
+      <xsd:element name="otilde" type="docEmptyType" />
+      <xsd:element name="oumlaut" type="docEmptyType" />
+      <xsd:element name="divide" type="docEmptyType" />
+      <xsd:element name="oslash" type="docEmptyType" />
+      <xsd:element name="ugrave" type="docEmptyType" />
+      <xsd:element name="uacute" type="docEmptyType" />
+      <xsd:element name="ucirc" type="docEmptyType" />
+      <xsd:element name="uumlaut" type="docEmptyType" />
+      <xsd:element name="yacute" type="docEmptyType" />
+      <xsd:element name="thorn" type="docEmptyType" />
+      <xsd:element name="yumlaut" type="docEmptyType" />
+      <xsd:element name="fnof" type="docEmptyType" />
+      <xsd:element name="Alpha" type="docEmptyType" />
+      <xsd:element name="Beta" type="docEmptyType" />
+      <xsd:element name="Gamma" type="docEmptyType" />
+      <xsd:element name="Delta" type="docEmptyType" />
+      <xsd:element name="Epsilon" type="docEmptyType" />
+      <xsd:element name="Zeta" type="docEmptyType" />
+      <xsd:element name="Eta" type="docEmptyType" />
+      <xsd:element name="Theta" type="docEmptyType" />
+      <xsd:element name="Iota" type="docEmptyType" />
+      <xsd:element name="Kappa" type="docEmptyType" />
+      <xsd:element name="Lambda" type="docEmptyType" />
+      <xsd:element name="Mu" type="docEmptyType" />
+      <xsd:element name="Nu" type="docEmptyType" />
+      <xsd:element name="Xi" type="docEmptyType" />
+      <xsd:element name="Omicron" type="docEmptyType" />
+      <xsd:element name="Pi" type="docEmptyType" />
+      <xsd:element name="Rho" type="docEmptyType" />
+      <xsd:element name="Sigma" type="docEmptyType" />
+      <xsd:element name="Tau" type="docEmptyType" />
+      <xsd:element name="Upsilon" type="docEmptyType" />
+      <xsd:element name="Phi" type="docEmptyType" />
+      <xsd:element name="Chi" type="docEmptyType" />
+      <xsd:element name="Psi" type="docEmptyType" />
+      <xsd:element name="Omega" type="docEmptyType" />
+      <xsd:element name="alpha" type="docEmptyType" />
+      <xsd:element name="beta" type="docEmptyType" />
+      <xsd:element name="gamma" type="docEmptyType" />
+      <xsd:element name="delta" type="docEmptyType" />
+      <xsd:element name="epsilon" type="docEmptyType" />
+      <xsd:element name="zeta" type="docEmptyType" />
+      <xsd:element name="eta" type="docEmptyType" />
+      <xsd:element name="theta" type="docEmptyType" />
+      <xsd:element name="iota" type="docEmptyType" />
+      <xsd:element name="kappa" type="docEmptyType" />
+      <xsd:element name="lambda" type="docEmptyType" />
+      <xsd:element name="mu" type="docEmptyType" />
+      <xsd:element name="nu" type="docEmptyType" />
+      <xsd:element name="xi" type="docEmptyType" />
+      <xsd:element name="omicron" type="docEmptyType" />
+      <xsd:element name="pi" type="docEmptyType" />
+      <xsd:element name="rho" type="docEmptyType" />
+      <xsd:element name="sigmaf" type="docEmptyType" />
+      <xsd:element name="sigma" type="docEmptyType" />
+      <xsd:element name="tau" type="docEmptyType" />
+      <xsd:element name="upsilon" type="docEmptyType" />
+      <xsd:element name="phi" type="docEmptyType" />
+      <xsd:element name="chi" type="docEmptyType" />
+      <xsd:element name="psi" type="docEmptyType" />
+      <xsd:element name="omega" type="docEmptyType" />
+      <xsd:element name="thetasym" type="docEmptyType" />
+      <xsd:element name="upsih" type="docEmptyType" />
+      <xsd:element name="piv" type="docEmptyType" />
+      <xsd:element name="bull" type="docEmptyType" />
+      <xsd:element name="hellip" type="docEmptyType" />
+      <xsd:element name="prime" type="docEmptyType" />
+      <xsd:element name="Prime" type="docEmptyType" />
+      <xsd:element name="oline" type="docEmptyType" />
+      <xsd:element name="frasl" type="docEmptyType" />
+      <xsd:element name="weierp" type="docEmptyType" />
+      <xsd:element name="imaginary" type="docEmptyType" />
+      <xsd:element name="real" type="docEmptyType" />
+      <xsd:element name="trademark" type="docEmptyType" />
+      <xsd:element name="alefsym" type="docEmptyType" />
+      <xsd:element name="larr" type="docEmptyType" />
+      <xsd:element name="uarr" type="docEmptyType" />
+      <xsd:element name="rarr" type="docEmptyType" />
+      <xsd:element name="darr" type="docEmptyType" />
+      <xsd:element name="harr" type="docEmptyType" />
+      <xsd:element name="crarr" type="docEmptyType" />
+      <xsd:element name="lArr" type="docEmptyType" />
+      <xsd:element name="uArr" type="docEmptyType" />
+      <xsd:element name="rArr" type="docEmptyType" />
+      <xsd:element name="dArr" type="docEmptyType" />
+      <xsd:element name="hArr" type="docEmptyType" />
+      <xsd:element name="forall" type="docEmptyType" />
+      <xsd:element name="part" type="docEmptyType" />
+      <xsd:element name="exist" type="docEmptyType" />
+      <xsd:element name="empty" type="docEmptyType" />
+      <xsd:element name="nabla" type="docEmptyType" />
+      <xsd:element name="isin" type="docEmptyType" />
+      <xsd:element name="notin" type="docEmptyType" />
+      <xsd:element name="ni" type="docEmptyType" />
+      <xsd:element name="prod" type="docEmptyType" />
+      <xsd:element name="sum" type="docEmptyType" />
+      <xsd:element name="minus" type="docEmptyType" />
+      <xsd:element name="lowast" type="docEmptyType" />
+      <xsd:element name="radic" type="docEmptyType" />
+      <xsd:element name="prop" type="docEmptyType" />
+      <xsd:element name="infin" type="docEmptyType" />
+      <xsd:element name="ang" type="docEmptyType" />
+      <xsd:element name="and" type="docEmptyType" />
+      <xsd:element name="or" type="docEmptyType" />
+      <xsd:element name="cap" type="docEmptyType" />
+      <xsd:element name="cup" type="docEmptyType" />
+      <xsd:element name="int" type="docEmptyType" />
+      <xsd:element name="there4" type="docEmptyType" />
+      <xsd:element name="sim" type="docEmptyType" />
+      <xsd:element name="cong" type="docEmptyType" />
+      <xsd:element name="asymp" type="docEmptyType" />
+      <xsd:element name="ne" type="docEmptyType" />
+      <xsd:element name="equiv" type="docEmptyType" />
+      <xsd:element name="le" type="docEmptyType" />
+      <xsd:element name="ge" type="docEmptyType" />
+      <xsd:element name="sub" type="docEmptyType" />
+      <xsd:element name="sup" type="docEmptyType" />
+      <xsd:element name="nsub" type="docEmptyType" />
+      <xsd:element name="sube" type="docEmptyType" />
+      <xsd:element name="supe" type="docEmptyType" />
+      <xsd:element name="oplus" type="docEmptyType" />
+      <xsd:element name="otimes" type="docEmptyType" />
+      <xsd:element name="perp" type="docEmptyType" />
+      <xsd:element name="sdot" type="docEmptyType" />
+      <xsd:element name="lceil" type="docEmptyType" />
+      <xsd:element name="rceil" type="docEmptyType" />
+      <xsd:element name="lfloor" type="docEmptyType" />
+      <xsd:element name="rfloor" type="docEmptyType" />
+      <xsd:element name="lang" type="docEmptyType" />
+      <xsd:element name="rang" type="docEmptyType" />
+      <xsd:element name="loz" type="docEmptyType" />
+      <xsd:element name="spades" type="docEmptyType" />
+      <xsd:element name="clubs" type="docEmptyType" />
+      <xsd:element name="hearts" type="docEmptyType" />
+      <xsd:element name="diams" type="docEmptyType" />
+      <xsd:element name="OElig" type="docEmptyType" />
+      <xsd:element name="oelig" type="docEmptyType" />
+      <xsd:element name="Scaron" type="docEmptyType" />
+      <xsd:element name="scaron" type="docEmptyType" />
+      <xsd:element name="Yumlaut" type="docEmptyType" />
+      <xsd:element name="circ" type="docEmptyType" />
+      <xsd:element name="tilde" type="docEmptyType" />
+      <xsd:element name="ensp" type="docEmptyType" />
+      <xsd:element name="emsp" type="docEmptyType" />
+      <xsd:element name="thinsp" type="docEmptyType" />
+      <xsd:element name="zwnj" type="docEmptyType" />
+      <xsd:element name="zwj" type="docEmptyType" />
+      <xsd:element name="lrm" type="docEmptyType" />
+      <xsd:element name="rlm" type="docEmptyType" />
+      <xsd:element name="ndash" type="docEmptyType" />
+      <xsd:element name="mdash" type="docEmptyType" />
+      <xsd:element name="lsquo" type="docEmptyType" />
+      <xsd:element name="rsquo" type="docEmptyType" />
+      <xsd:element name="sbquo" type="docEmptyType" />
+      <xsd:element name="ldquo" type="docEmptyType" />
+      <xsd:element name="rdquo" type="docEmptyType" />
+      <xsd:element name="bdquo" type="docEmptyType" />
+      <xsd:element name="dagger" type="docEmptyType" />
+      <xsd:element name="Dagger" type="docEmptyType" />
+      <xsd:element name="permil" type="docEmptyType" />
+      <xsd:element name="lsaquo" type="docEmptyType" />
+      <xsd:element name="rsaquo" type="docEmptyType" />
+      <xsd:element name="euro" type="docEmptyType" />
+      <xsd:element name="tm" type="docEmptyType" />
+    </xsd:choice>
+  </xsd:group>
+
+  <xsd:complexType name="docTitleType" mixed="true">
+    <xsd:group ref="docTitleCmdGroup" minOccurs="0" maxOccurs="unbounded" />
+  </xsd:complexType>
+
+  <xsd:group name="docCmdGroup">
+    <xsd:choice>
+      <xsd:group ref="docTitleCmdGroup"/>
+      <xsd:element name="hruler" type="docEmptyType" />
+      <xsd:element name="preformatted" type="docMarkupType" />
+      <xsd:element name="programlisting" type="listingType" />
+      <xsd:element name="verbatim" type="xsd:string" />
+      <xsd:element name="javadocliteral" type="xsd:string" />
+      <xsd:element name="javadoccode" type="xsd:string" />
+      <xsd:element name="indexentry" type="docIndexEntryType" />
+      <xsd:element name="orderedlist" type="docListType" />
+      <xsd:element name="itemizedlist" type="docListType" />
+      <xsd:element name="simplesect" type="docSimpleSectType" />
+      <xsd:element name="title" type="docTitleType" />
+      <xsd:element name="variablelist" type="docVariableListType" />
+      <xsd:element name="table" type="docTableType" />
+      <xsd:element name="heading" type="docHeadingType" />
+      <xsd:element name="dotfile" type="docImageFileType" />
+      <xsd:element name="mscfile" type="docImageFileType" />
+      <xsd:element name="diafile" type="docImageFileType" />
+      <xsd:element name="toclist" type="docTocListType" />
+      <xsd:element name="language" type="docLanguageType" />
+      <xsd:element name="parameterlist" type="docParamListType" />
+      <xsd:element name="xrefsect" type="docXRefSectType" />
+      <xsd:element name="copydoc" type="docCopyType" />
+      <xsd:element name="blockquote" type="docBlockQuoteType" />
+      <xsd:element name="parblock" type="docParBlockType" />
+    </xsd:choice>
+  </xsd:group>
+
+  <xsd:complexType name="docParaType" mixed="true">
+    <xsd:group ref="docCmdGroup" minOccurs="0" maxOccurs="unbounded" />
+  </xsd:complexType>
+
+  <xsd:complexType name="docMarkupType" mixed="true">
+    <xsd:group ref="docCmdGroup" minOccurs="0" maxOccurs="unbounded" />
+  </xsd:complexType>
+
+  <xsd:complexType name="docURLLink" mixed="true">
+    <xsd:group ref="docTitleCmdGroup" minOccurs="0" maxOccurs="unbounded" />
+    <xsd:attribute name="url" type="xsd:string" />
+  </xsd:complexType>
+
+  <xsd:complexType name="docAnchorType" mixed="true">
+    <xsd:attribute name="id" type="xsd:string" />
+  </xsd:complexType>
+
+  <xsd:complexType name="docFormulaType" mixed="true">
+    <xsd:attribute name="id" type="xsd:string" />
+  </xsd:complexType>
+
+  <xsd:complexType name="docIndexEntryType">
+    <xsd:sequence>
+      <xsd:element name="primaryie" type="xsd:string" />
+      <xsd:element name="secondaryie" type="xsd:string" />
+    </xsd:sequence>
+  </xsd:complexType>
+
+  <xsd:complexType name="docListType">
+    <xsd:sequence>
+      <xsd:element name="listitem" type="docListItemType" maxOccurs="unbounded" />
+    </xsd:sequence>
+    <xsd:attribute name="type" type="DoxOlType" />
+    <xsd:attribute name="start" type="xsd:integer" />
+  </xsd:complexType>
+
+  <xsd:complexType name="docListItemType">
+    <xsd:sequence>
+      <xsd:element name="para" type="docParaType" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+    <xsd:attribute name="value" type="xsd:integer" use="optional"/>
+  </xsd:complexType>
+
+  <xsd:complexType name="docSimpleSectType">
+    <xsd:sequence>
+      <xsd:element name="title" type="docTitleType" minOccurs="0" />
+      <xsd:sequence minOccurs="0" maxOccurs="unbounded">
+        <xsd:element name="para" type="docParaType" minOccurs="1" maxOccurs="unbounded" />
+      </xsd:sequence>
+    </xsd:sequence>
+    <xsd:attribute name="kind" type="DoxSimpleSectKind" />
+  </xsd:complexType>
+
+  <xsd:complexType name="docVarListEntryType">
+    <xsd:sequence>
+      <xsd:element name="term" type="docTitleType" />
+    </xsd:sequence>
+  </xsd:complexType>
+
+  <xsd:group name="docVariableListGroup">
+    <xsd:sequence>
+      <xsd:element name="varlistentry" type="docVarListEntryType" />
+      <xsd:element name="listitem" type="docListItemType" />
+    </xsd:sequence>
+  </xsd:group>
+
+  <xsd:complexType name="docVariableListType">
+    <xsd:sequence>
+      <xsd:group ref="docVariableListGroup" maxOccurs="unbounded" />
+    </xsd:sequence>
+  </xsd:complexType>
+
+  <xsd:complexType name="docRefTextType" mixed="true">
+    <xsd:group ref="docTitleCmdGroup" minOccurs="0" maxOccurs="unbounded" />
+    <xsd:attribute name="refid" type="xsd:string" />
+    <xsd:attribute name="kindref" type="DoxRefKind" />
+    <xsd:attribute name="external" type="xsd:string" />
+  </xsd:complexType>
+
+  <xsd:complexType name="docTableType">
+    <xsd:sequence>
+      <xsd:element name="caption" type="docCaptionType" minOccurs="0" maxOccurs="1" />
+      <xsd:element name="row" type="docRowType" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+    <xsd:attribute name="rows" type="xsd:integer" />
+    <xsd:attribute name="cols" type="xsd:integer" />
+    <xsd:attribute name="width" type="xsd:string" />
+  </xsd:complexType>
+
+  <xsd:complexType name="docRowType">
+    <xsd:sequence>
+      <xsd:element name="entry" type="docEntryType" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+  </xsd:complexType>
+
+  <xsd:complexType name="docEntryType">
+    <xsd:sequence>
+      <xsd:element name="para" type="docParaType" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+    <xsd:attribute name="thead" type="DoxBool" />
+    <xsd:attribute name="colspan" type="xsd:integer" />
+    <xsd:attribute name="rowspan" type="xsd:integer" />
+    <xsd:attribute name="align" type="DoxAlign" />
+    <xsd:attribute name="valign" type="DoxVerticalAlign" />
+    <xsd:attribute name="width" type="xsd:string" />
+    <xsd:attribute name="class" type="xsd:string" />
+    <xsd:anyAttribute processContents="skip"/>
+  </xsd:complexType>
+
+  <xsd:complexType name="docCaptionType" mixed="true">
+    <xsd:group ref="docTitleCmdGroup" minOccurs="0" maxOccurs="unbounded" />
+    <xsd:attribute name="id" type="xsd:string" /> 
+  </xsd:complexType>
+
+  <xsd:complexType name="docHeadingType" mixed="true">
+    <xsd:group ref="docTitleCmdGroup" minOccurs="0" maxOccurs="unbounded" />
+    <xsd:attribute name="level" type="xsd:integer" /> <!-- todo: range 1-6 -->
+  </xsd:complexType>
+
+  <xsd:complexType name="docImageType" mixed="true">
+    <xsd:group ref="docTitleCmdGroup" minOccurs="0" maxOccurs="unbounded" />
+    <xsd:attribute name="type" type="DoxImageKind" use="optional"/>
+    <xsd:attribute name="name" type="xsd:string" use="optional"/>
+    <xsd:attribute name="width" type="xsd:string" use="optional"/>
+    <xsd:attribute name="height" type="xsd:string" use="optional"/>
+    <xsd:attribute name="alt" type="xsd:string" use="optional"/>
+    <xsd:attribute name="inline" type="DoxBool" use="optional"/>
+    <xsd:attribute name="caption" type="xsd:string" use="optional"/>
+  </xsd:complexType>
+
+  <xsd:complexType name="docDotMscType" mixed="true">
+    <xsd:group ref="docTitleCmdGroup" minOccurs="0" maxOccurs="unbounded" />
+    <xsd:attribute name="name" type="xsd:string" use="optional"/>
+    <xsd:attribute name="width" type="xsd:string" use="optional"/>
+    <xsd:attribute name="height" type="xsd:string" use="optional"/>
+    <xsd:attribute name="caption" type="xsd:string" use="optional"/>
+  </xsd:complexType>
+
+  <xsd:complexType name="docImageFileType" mixed="true">
+    <xsd:group ref="docTitleCmdGroup" minOccurs="0" maxOccurs="unbounded" />
+    <xsd:attribute name="name" type="xsd:string" use="optional">
+      <xsd:annotation>
+        <xsd:documentation>The mentioned file will be located in the directory as specified by XML_OUTPUT</xsd:documentation>
+      </xsd:annotation>
+    </xsd:attribute>
+    <xsd:attribute name="width" type="xsd:string" use="optional"/>
+    <xsd:attribute name="height" type="xsd:string" use="optional"/>
+  </xsd:complexType>
+
+  <xsd:complexType name="docPlantumlType" mixed="true">
+    <xsd:group ref="docTitleCmdGroup" minOccurs="0" maxOccurs="unbounded" />
+    <xsd:attribute name="name" type="xsd:string" use="optional"/>
+    <xsd:attribute name="width" type="xsd:string" use="optional"/>
+    <xsd:attribute name="height" type="xsd:string" use="optional"/>
+    <xsd:attribute name="caption" type="xsd:string" use="optional"/>
+    <xsd:attribute name="engine" type="DoxPlantumlEngine" use="optional"/>
+  </xsd:complexType>
+
+  <xsd:complexType name="docTocItemType" mixed="true">
+    <xsd:group ref="docTitleCmdGroup" minOccurs="0" maxOccurs="unbounded" />
+    <xsd:attribute name="id" type="xsd:string" /> 
+  </xsd:complexType>
+
+  <xsd:complexType name="docTocListType">
+    <xsd:sequence>
+      <xsd:element name="tocitem" type="docTocItemType" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+  </xsd:complexType>
+
+  <xsd:complexType name="docLanguageType">
+    <xsd:sequence>
+      <xsd:element name="para" type="docParaType" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+    <xsd:attribute name="langid" type="xsd:string" /> 
+  </xsd:complexType>
+
+  <xsd:complexType name="docParamListType">
+    <xsd:sequence>
+      <xsd:element name="parameteritem" type="docParamListItem" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+    <xsd:attribute name="kind" type="DoxParamListKind" /> 
+  </xsd:complexType>
+
+  <xsd:complexType name="docParamListItem">
+    <xsd:sequence>
+      <xsd:element name="parameternamelist" type="docParamNameList" minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="parameterdescription" type="descriptionType" />
+    </xsd:sequence>
+  </xsd:complexType>
+
+  <xsd:complexType name="docParamNameList">
+    <xsd:sequence>
+      <xsd:element name="parametertype" type="docParamType" minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="parametername" type="docParamName" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+  </xsd:complexType>
+
+  <xsd:complexType name="docParamType" mixed="true">
+    <xsd:sequence>
+      <xsd:element name="ref" type="refTextType" minOccurs="0" maxOccurs="1" />
+    </xsd:sequence>
+  </xsd:complexType>
+
+  <xsd:complexType name="docParamName" mixed="true">
+    <xsd:sequence>
+      <xsd:element name="ref" type="refTextType" minOccurs="0" maxOccurs="1" />
+    </xsd:sequence>
+    <xsd:attribute name="direction" type="DoxParamDir" use="optional" />
+  </xsd:complexType>
+
+  <xsd:complexType name="docXRefSectType">
+    <xsd:sequence>
+      <xsd:element name="xreftitle" type="xsd:string" minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="xrefdescription" type="descriptionType" />
+    </xsd:sequence>
+    <xsd:attribute name="id" type="xsd:string" /> 
+  </xsd:complexType>
+
+  <xsd:complexType name="docCopyType">
+    <xsd:sequence>
+      <xsd:element name="para" type="docParaType" minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="sect1" type="docSect1Type" minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="internal" type="docInternalType" minOccurs="0" />
+    </xsd:sequence>
+    <xsd:attribute name="link" type="xsd:string" /> 
+  </xsd:complexType>
+
+  <xsd:complexType name="docBlockQuoteType">
+    <xsd:sequence>
+      <xsd:element name="para" type="docParaType" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+  </xsd:complexType>
+
+  <xsd:complexType name="docParBlockType">
+    <xsd:sequence>
+      <xsd:element name="para" type="docParaType" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+  </xsd:complexType>
+
+  <xsd:complexType name="docEmptyType"/>
+
+  <xsd:complexType name="tableofcontentsType">
+    <xsd:sequence>
+      <xsd:element name="tocsect" type="tableofcontentsKindType" minOccurs="1" maxOccurs="unbounded" />
+    </xsd:sequence>
+  </xsd:complexType>
+
+  <xsd:complexType name="tableofcontentsKindType">
+    <xsd:sequence>
+      <xsd:element name="name" type="xsd:string" minOccurs="1" maxOccurs="1"/>
+      <xsd:element name="reference" type="xsd:string" minOccurs="1" maxOccurs="1"/>
+      <xsd:element name="tableofcontents" type="tableofcontentsType" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+  </xsd:complexType>
+
+  <xsd:complexType name="docEmojiType">
+    <xsd:attribute name="name" type="xsd:string"/>
+    <xsd:attribute name="unicode" type="xsd:string"/>
+  </xsd:complexType>
+
+  <!-- Simple types -->
+
+  <xsd:simpleType name="DoxBool">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="yes" />
+      <xsd:enumeration value="no" />
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="DoxGraphRelation">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="include" />
+      <xsd:enumeration value="usage" />
+      <xsd:enumeration value="template-instance" />
+      <xsd:enumeration value="public-inheritance" />
+      <xsd:enumeration value="protected-inheritance" />
+      <xsd:enumeration value="private-inheritance" />
+      <xsd:enumeration value="type-constraint" />
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="DoxRefKind">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="compound" />
+      <xsd:enumeration value="member" />
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="DoxMemberKind">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="define" />
+      <xsd:enumeration value="property" />
+      <xsd:enumeration value="event" />
+      <xsd:enumeration value="variable" />
+      <xsd:enumeration value="typedef" />
+      <xsd:enumeration value="enum" />
+      <xsd:enumeration value="function" />
+      <xsd:enumeration value="signal" />
+      <xsd:enumeration value="prototype" />
+      <xsd:enumeration value="friend" />
+      <xsd:enumeration value="dcop" />
+      <xsd:enumeration value="slot" />
+      <xsd:enumeration value="interface" />
+      <xsd:enumeration value="service" />
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="DoxProtectionKind">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="public" />
+      <xsd:enumeration value="protected" />
+      <xsd:enumeration value="private" />
+      <xsd:enumeration value="package" />
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="DoxRefQualifierKind">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="lvalue" />
+      <xsd:enumeration value="rvalue" />
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="DoxLanguage">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="Unknown" />
+      <xsd:enumeration value="IDL" />
+      <xsd:enumeration value="Java" />
+      <xsd:enumeration value="C#" />
+      <xsd:enumeration value="D" />
+      <xsd:enumeration value="PHP" />
+      <xsd:enumeration value="Objective-C" />
+      <xsd:enumeration value="C++" />
+      <xsd:enumeration value="JavaScript" />
+      <xsd:enumeration value="Python" />
+      <xsd:enumeration value="Fortran" />
+      <xsd:enumeration value="VHDL" />
+      <xsd:enumeration value="XML" />
+      <xsd:enumeration value="SQL" />
+      <xsd:enumeration value="Markdown" />
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="DoxVirtualKind">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="non-virtual" />
+      <xsd:enumeration value="virtual" />
+      <xsd:enumeration value="pure-virtual" />
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="DoxCompoundKind">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="class" />
+      <xsd:enumeration value="struct" />
+      <xsd:enumeration value="union" />
+      <xsd:enumeration value="interface" />
+      <xsd:enumeration value="protocol" />
+      <xsd:enumeration value="category" />
+      <xsd:enumeration value="exception" />
+      <xsd:enumeration value="service" />
+      <xsd:enumeration value="singleton" />
+      <xsd:enumeration value="module" />
+      <xsd:enumeration value="type" />
+      <xsd:enumeration value="file" />
+      <xsd:enumeration value="namespace" />
+      <xsd:enumeration value="group" />
+      <xsd:enumeration value="page" />
+      <xsd:enumeration value="example" />
+      <xsd:enumeration value="dir" />
+      <xsd:enumeration value="concept" />
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="DoxSectionKind">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="user-defined" />
+      <xsd:enumeration value="public-type" />
+      <xsd:enumeration value="public-func" />
+      <xsd:enumeration value="public-attrib" />
+      <xsd:enumeration value="public-slot" />
+      <xsd:enumeration value="signal" />
+      <xsd:enumeration value="dcop-func" />
+      <xsd:enumeration value="property" />
+      <xsd:enumeration value="event" />
+      <xsd:enumeration value="public-static-func" />
+      <xsd:enumeration value="public-static-attrib" />
+      <xsd:enumeration value="protected-type" />
+      <xsd:enumeration value="protected-func" />
+      <xsd:enumeration value="protected-attrib" />
+      <xsd:enumeration value="protected-slot" />
+      <xsd:enumeration value="protected-static-func" />
+      <xsd:enumeration value="protected-static-attrib" />
+      <xsd:enumeration value="package-type" />
+      <xsd:enumeration value="package-func" />
+      <xsd:enumeration value="package-attrib" />
+      <xsd:enumeration value="package-static-func" />
+      <xsd:enumeration value="package-static-attrib" />
+      <xsd:enumeration value="private-type" />
+      <xsd:enumeration value="private-func" />
+      <xsd:enumeration value="private-attrib" />
+      <xsd:enumeration value="private-slot" />
+      <xsd:enumeration value="private-static-func" />
+      <xsd:enumeration value="private-static-attrib" />
+      <xsd:enumeration value="friend" />
+      <xsd:enumeration value="related" />
+      <xsd:enumeration value="define" />
+      <xsd:enumeration value="prototype" />
+      <xsd:enumeration value="typedef" />
+      <xsd:enumeration value="enum" />
+      <xsd:enumeration value="func" />
+      <xsd:enumeration value="var" />
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="DoxHighlightClass">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="comment" />
+      <xsd:enumeration value="normal" />
+      <xsd:enumeration value="preprocessor" />
+      <xsd:enumeration value="keyword" />
+      <xsd:enumeration value="keywordtype" />
+      <xsd:enumeration value="keywordflow" />
+      <xsd:enumeration value="stringliteral" />
+      <xsd:enumeration value="charliteral" />
+      <xsd:enumeration value="vhdlkeyword" />
+      <xsd:enumeration value="vhdllogic" />
+      <xsd:enumeration value="vhdlchar" />
+      <xsd:enumeration value="vhdldigit" />
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="DoxSimpleSectKind">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="see" />
+      <xsd:enumeration value="return" />
+      <xsd:enumeration value="author" />
+      <xsd:enumeration value="authors" />
+      <xsd:enumeration value="version" />
+      <xsd:enumeration value="since" />
+      <xsd:enumeration value="date" />
+      <xsd:enumeration value="note" />
+      <xsd:enumeration value="warning" />
+      <xsd:enumeration value="pre" />
+      <xsd:enumeration value="post" />
+      <xsd:enumeration value="copyright" />
+      <xsd:enumeration value="invariant" />
+      <xsd:enumeration value="remark" />
+      <xsd:enumeration value="attention" />
+      <xsd:enumeration value="par" />
+      <xsd:enumeration value="rcs" />
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="DoxVersionNumber">
+    <xsd:restriction base="xsd:string">
+      <xsd:pattern value="\d+\.\d+.*" />
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="DoxImageKind">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="html" />
+      <xsd:enumeration value="latex" />
+      <xsd:enumeration value="docbook" />
+      <xsd:enumeration value="rtf" />
+      <xsd:enumeration value="xml" />
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="DoxPlantumlEngine">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="uml"/>
+      <xsd:enumeration value="bpm"/>
+      <xsd:enumeration value="wire"/>
+      <xsd:enumeration value="dot"/>
+      <xsd:enumeration value="ditaa"/>
+      <xsd:enumeration value="salt"/>
+      <xsd:enumeration value="math"/>
+      <xsd:enumeration value="latex"/>
+      <xsd:enumeration value="gantt"/>
+      <xsd:enumeration value="mindmap"/>
+      <xsd:enumeration value="wbs"/>
+      <xsd:enumeration value="yaml"/>
+      <xsd:enumeration value="creole"/>
+      <xsd:enumeration value="json"/>
+      <xsd:enumeration value="flow"/>
+      <xsd:enumeration value="board"/>
+      <xsd:enumeration value="git"/>
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="DoxParamListKind">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="param" />
+      <xsd:enumeration value="retval" />
+      <xsd:enumeration value="exception" />
+      <xsd:enumeration value="templateparam" />
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="DoxCharRange">
+    <xsd:restriction base="xsd:string">
+      <xsd:pattern value="[aeiouncAEIOUNC]" />
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="DoxParamDir">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="in"/>
+      <xsd:enumeration value="out"/>
+      <xsd:enumeration value="inout"/>
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="DoxAccessor">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="retain"/>
+      <xsd:enumeration value="copy"/>
+      <xsd:enumeration value="assign"/>
+      <xsd:enumeration value="weak"/>
+      <xsd:enumeration value="strong"/>
+      <xsd:enumeration value="unretained"/>
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="DoxAlign">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="left"/>
+      <xsd:enumeration value="right"/>
+      <xsd:enumeration value="center"/>
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="DoxVerticalAlign">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="bottom"/>
+      <xsd:enumeration value="top"/>
+      <xsd:enumeration value="middle"/>
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="DoxOlType">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="1" />
+      <xsd:enumeration value="a" />
+      <xsd:enumeration value="A" />
+      <xsd:enumeration value="i" />
+      <xsd:enumeration value="I" />
+    </xsd:restriction>
+  </xsd:simpleType>
+
+</xsd:schema>
+
diff --git a/docs345/xml/config-commands_8md.xml b/docs345/xml/config-commands_8md.xml
new file mode 100644
index 0000000..4eb0949
--- /dev/null
+++ b/docs345/xml/config-commands_8md.xml
@@ -0,0 +1,179 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="config-commands_8md" kind="file" language="Markdown">
+    <compoundname>config-commands.md</compoundname>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline><highlight class="normal">#<sp/>Penify<sp/>CLI<sp/>-<sp/>Configuration<sp/>Commands</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">The<sp/>`config`<sp/>command<sp/>allows<sp/>you<sp/>to<sp/>set<sp/>up<sp/>and<sp/>manage<sp/>configuration<sp/>settings<sp/>for<sp/>Penify<sp/>CLI.<sp/>This<sp/>document<sp/>explains<sp/>all<sp/>available<sp/>configuration<sp/>options<sp/>and<sp/>how<sp/>to<sp/>use<sp/>them.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Configuration<sp/>Overview</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Penify<sp/>CLI<sp/>stores<sp/>configuration<sp/>in<sp/>a<sp/>JSON<sp/>file<sp/>at<sp/>`~/.penify/config.json`.<sp/>The<sp/>configuration<sp/>includes:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>LLM<sp/>(Large<sp/>Language<sp/>Model)<sp/>settings<sp/>for<sp/>local<sp/>commit<sp/>message<sp/>generation</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>JIRA<sp/>integration<sp/>settings<sp/>for<sp/>enhanced<sp/>commit<sp/>messages</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>API<sp/>tokens<sp/>and<sp/>other<sp/>credentials</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Basic<sp/>Usage</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Configure<sp/>LLM<sp/>settings</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>config<sp/>llm</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Configure<sp/>JIRA<sp/>integration</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>config<sp/>jira</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>LLM<sp/>Configuration</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Web<sp/>Interface</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Running<sp/>`penify<sp/>config<sp/>llm`<sp/>opens<sp/>a<sp/>web<sp/>interface<sp/>in<sp/>your<sp/>browser<sp/>where<sp/>you<sp/>can<sp/>configure:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">1.<sp/>**Model**:<sp/>The<sp/>LLM<sp/>model<sp/>to<sp/>use<sp/>(e.g.,<sp/>`gpt-3.5-turbo`)</highlight></codeline>
+<codeline><highlight class="normal">2.<sp/>**API<sp/>Base<sp/>URL**:<sp/>The<sp/>endpoint<sp/>URL<sp/>for<sp/>your<sp/>LLM<sp/>API<sp/>(e.g.,<sp/>`https://api.openai.com/v1`)</highlight></codeline>
+<codeline><highlight class="normal">3.<sp/>**API<sp/>Key**:<sp/>Your<sp/>authentication<sp/>key<sp/>for<sp/>the<sp/>LLM<sp/>API</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Supported<sp/>LLMs</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Penify<sp/>CLI<sp/>supports<sp/>various<sp/>LLM<sp/>providers:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>OpenAI</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Model:<sp/>`gpt-3.5-turbo`<sp/>or<sp/>`gpt-4`</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>API<sp/>Base:<sp/>`https://api.openai.com/v1`</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>API<sp/>Key:<sp/>Your<sp/>OpenAI<sp/>API<sp/>key</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Anthropic</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Model:<sp/>`claude-instant-1`<sp/>or<sp/>`claude-2`</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>API<sp/>Base:<sp/>`https://api.anthropic.com/v1`</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>API<sp/>Key:<sp/>Your<sp/>Anthropic<sp/>API<sp/>key</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Ollama<sp/>(Local)</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Model:<sp/>`llama2`<sp/>or<sp/>any<sp/>model<sp/>you<sp/>have<sp/>installed</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>API<sp/>Base:<sp/>`http://localhost:11434`</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>API<sp/>Key:<sp/>(leave<sp/>blank)</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Azure<sp/>OpenAI</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Model:<sp/>Your<sp/>deployed<sp/>model<sp/>name</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>API<sp/>Base:<sp/>Your<sp/>Azure<sp/>endpoint</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>API<sp/>Key:<sp/>Your<sp/>Azure<sp/>API<sp/>key</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Configuration<sp/>File<sp/>Structure</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">After<sp/>configuration,<sp/>your<sp/>`~/.penify/config.json`<sp/>will<sp/>contain:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```json</highlight></codeline>
+<codeline><highlight class="normal">{</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>&quot;llm&quot;:<sp/>{</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>&quot;model&quot;:<sp/>&quot;gpt-3.5-turbo&quot;,</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>&quot;api_base&quot;:<sp/>&quot;https://api.openai.com/v1&quot;,</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>&quot;api_key&quot;:<sp/>&quot;sk-...&quot;</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>}</highlight></codeline>
+<codeline><highlight class="normal">}</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>JIRA<sp/>Configuration</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Web<sp/>Interface</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Running<sp/>`penify<sp/>config<sp/>jira`<sp/>opens<sp/>a<sp/>web<sp/>interface<sp/>where<sp/>you<sp/>can<sp/>configure:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">1.<sp/>**JIRA<sp/>URL**:<sp/>Your<sp/>JIRA<sp/>instance<sp/>URL<sp/>(e.g.,<sp/>`https://yourcompany.atlassian.net`)</highlight></codeline>
+<codeline><highlight class="normal">2.<sp/>**Username**:<sp/>Your<sp/>JIRA<sp/>username<sp/>(typically<sp/>your<sp/>email)</highlight></codeline>
+<codeline><highlight class="normal">3.<sp/>**API<sp/>Token**:<sp/>Your<sp/>JIRA<sp/>API<sp/>token</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Creating<sp/>a<sp/>JIRA<sp/>API<sp/>Token</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">1.<sp/>Log<sp/>in<sp/>to<sp/>[https://id.atlassian.com/manage-profile/security/api-tokens](https://id.atlassian.com/manage-profile/security/api-tokens)</highlight></codeline>
+<codeline><highlight class="normal">2.<sp/>Click<sp/>&quot;Create<sp/>API<sp/>token&quot;</highlight></codeline>
+<codeline><highlight class="normal">3.<sp/>Give<sp/>it<sp/>a<sp/>name<sp/>(e.g.,<sp/>&quot;Penify<sp/>CLI&quot;)</highlight></codeline>
+<codeline><highlight class="normal">4.<sp/>Copy<sp/>the<sp/>generated<sp/>token<sp/>and<sp/>paste<sp/>it<sp/>into<sp/>the<sp/>configuration</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Configuration<sp/>File<sp/>Structure</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">After<sp/>configuration,<sp/>your<sp/>`~/.penify/config.json`<sp/>will<sp/>contain:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```json</highlight></codeline>
+<codeline><highlight class="normal">{</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>&quot;jira&quot;:<sp/>{</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>&quot;url&quot;:<sp/>&quot;https://yourcompany.atlassian.net&quot;,</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>&quot;username&quot;:<sp/>&quot;your.email@example.com&quot;,</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>&quot;api_token&quot;:<sp/>&quot;your-jira-api-token&quot;</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>}</highlight></codeline>
+<codeline><highlight class="normal">}</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Configuration<sp/>Locations</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Penify<sp/>CLI<sp/>looks<sp/>for<sp/>configuration<sp/>in<sp/>multiple<sp/>locations:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">1.<sp/>Project-specific:<sp/>`.penify/config.json`<sp/>in<sp/>the<sp/>Git<sp/>repository<sp/>root</highlight></codeline>
+<codeline><highlight class="normal">2.<sp/>User-specific:<sp/>`~/.penify/config.json`<sp/>in<sp/>your<sp/>home<sp/>directory</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">The<sp/>project-specific<sp/>configuration<sp/>takes<sp/>precedence<sp/>if<sp/>both<sp/>exist.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Environment<sp/>Variables</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">You<sp/>can<sp/>override<sp/>configuration<sp/>settings<sp/>using<sp/>environment<sp/>variables:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>`PENIFY_API_TOKEN`:<sp/>Override<sp/>the<sp/>stored<sp/>API<sp/>token</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>`PENIFY_LLM_MODEL`:<sp/>Override<sp/>the<sp/>configured<sp/>LLM<sp/>model</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>`PENIFY_LLM_API_BASE`:<sp/>Override<sp/>the<sp/>configured<sp/>LLM<sp/>API<sp/>base<sp/>URL</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>`PENIFY_LLM_API_KEY`:<sp/>Override<sp/>the<sp/>configured<sp/>LLM<sp/>API<sp/>key</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>`PENIFY_JIRA_URL`:<sp/>Override<sp/>the<sp/>configured<sp/>JIRA<sp/>URL</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>`PENIFY_JIRA_USER`:<sp/>Override<sp/>the<sp/>configured<sp/>JIRA<sp/>username</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>`PENIFY_JIRA_TOKEN`:<sp/>Override<sp/>the<sp/>configured<sp/>JIRA<sp/>API<sp/>token</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Example:</highlight></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">export<sp/>PENIFY_LLM_MODEL=&quot;gpt-4&quot;</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>commit</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Command-Line<sp/>Configuration</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">For<sp/>advanced<sp/>users<sp/>or<sp/>scripting,<sp/>you<sp/>can<sp/>directly<sp/>edit<sp/>the<sp/>configuration<sp/>file:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>View<sp/>current<sp/>configuration</highlight></codeline>
+<codeline><highlight class="normal">cat<sp/>~/.penify/config.json</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Edit<sp/>configuration<sp/>with<sp/>your<sp/>preferred<sp/>editor</highlight></codeline>
+<codeline><highlight class="normal">nano<sp/>~/.penify/config.json</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Sharing<sp/>Configuration</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">You<sp/>can<sp/>share<sp/>configuration<sp/>between<sp/>machines<sp/>by<sp/>copying<sp/>the<sp/>`.penify/config.json`<sp/>file.<sp/>However,<sp/>be<sp/>cautious<sp/>with<sp/>API<sp/>keys<sp/>and<sp/>credentials.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">For<sp/>team<sp/>settings,<sp/>consider:</highlight></codeline>
+<codeline><highlight class="normal">1.<sp/>Using<sp/>a<sp/>project-specific<sp/>`.penify/config.json`<sp/>with<sp/>shared<sp/>settings</highlight></codeline>
+<codeline><highlight class="normal">2.<sp/>Excluding<sp/>API<sp/>keys<sp/>from<sp/>shared<sp/>configuration</highlight></codeline>
+<codeline><highlight class="normal">3.<sp/>Using<sp/>environment<sp/>variables<sp/>for<sp/>sensitive<sp/>credentials</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Troubleshooting</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Common<sp/>Issues</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">1.<sp/>**&quot;Error<sp/>reading<sp/>configuration<sp/>file&quot;**</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Check<sp/>if<sp/>the<sp/>file<sp/>exists:<sp/>`ls<sp/>-la<sp/>~/.penify`</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Ensure<sp/>it<sp/>contains<sp/>valid<sp/>JSON:<sp/>`cat<sp/>~/.penify/config.json`</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">2.<sp/>**&quot;Failed<sp/>to<sp/>connect<sp/>to<sp/>LLM<sp/>API&quot;**</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Verify<sp/>API<sp/>base<sp/>URL<sp/>and<sp/>API<sp/>key</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Check<sp/>network<sp/>connectivity<sp/>to<sp/>the<sp/>API<sp/>endpoint</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Ensure<sp/>your<sp/>account<sp/>has<sp/>access<sp/>to<sp/>the<sp/>specified<sp/>model</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">3.<sp/>**&quot;Failed<sp/>to<sp/>connect<sp/>to<sp/>JIRA&quot;**</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Check<sp/>JIRA<sp/>URL<sp/>format<sp/>(should<sp/>include<sp/>`https://`)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Verify<sp/>username<sp/>and<sp/>API<sp/>token</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Ensure<sp/>your<sp/>JIRA<sp/>account<sp/>has<sp/>API<sp/>access<sp/>permissions</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/config-commands.md"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/config__command_8py.xml b/docs345/xml/config__command_8py.xml
new file mode 100644
index 0000000..4bf3e78
--- /dev/null
+++ b/docs345/xml/config__command_8py.xml
@@ -0,0 +1,112 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="config__command_8py" kind="file" language="Python">
+    <compoundname>config_command.py</compoundname>
+    <innernamespace refid="namespacepenify__hook">penify_hook</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1config__command">penify_hook::config_command</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacepenify__hook_1_1config__command" refkind="compound"><highlight class="normal"></highlight></codeline>
+<codeline lineno="2"><highlight class="normal"></highlight></codeline>
+<codeline lineno="3"><highlight class="normal"></highlight></codeline>
+<codeline lineno="4" refid="namespacepenify__hook_1_1config__command_1a4f3eb92164a69df1446d745f8a09285e" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1config__command_1a4f3eb92164a69df1446d745f8a09285e" kindref="member">setup_config_parser</ref>(parent_parser):</highlight></codeline>
+<codeline lineno="5"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Set<sp/>up<sp/>a<sp/>configuration<sp/>parser<sp/>with<sp/>subparsers<sp/>for<sp/>different<sp/>types<sp/>of</highlight></codeline>
+<codeline lineno="6"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>configurations.</highlight></codeline>
+<codeline lineno="7"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="8"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>configures<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>adds<sp/>subcommands<sp/>to<sp/>the<sp/>parent<sp/>parser.<sp/>Each</highlight></codeline>
+<codeline lineno="9"><highlight class="normal"><sp/><sp/><sp/><sp/>subcommand<sp/>corresponds<sp/>to<sp/>a<sp/>specific<sp/>type<sp/>of<sp/>configuration,<sp/>such<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>LLM</highlight></codeline>
+<codeline lineno="10"><highlight class="normal"><sp/><sp/><sp/><sp/>(Language<sp/>Model)<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/>JIRA.<sp/>It<sp/>allows<sp/>users<sp/>to<sp/>configure<sp/>settings<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="11"><highlight class="normal"><sp/><sp/><sp/><sp/>these<sp/>systems<sp/>through<sp/>command-line<sp/>arguments.</highlight></codeline>
+<codeline lineno="12"><highlight class="normal"></highlight></codeline>
+<codeline lineno="13"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="14"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>parent_parser<sp/>(argparse.ArgumentParser):<sp/>The<sp/>parent<sp/>parser<sp/>to<sp/>which<sp/>the<sp/>config<sp/>subparsers<sp/>will<sp/>be<sp/>added.</highlight></codeline>
+<codeline lineno="15"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="16"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="17"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Config<sp/>subcommand:<sp/>Create<sp/>subparsers<sp/>for<sp/>config<sp/>types</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="18"><highlight class="normal"><sp/><sp/><sp/><sp/>parser<sp/>=<sp/>parent_parser.add_subparsers(title=</highlight><highlight class="stringliteral">&quot;config_type&quot;</highlight><highlight class="normal">,<sp/>dest=</highlight><highlight class="stringliteral">&quot;config_type&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="19"><highlight class="normal"></highlight></codeline>
+<codeline lineno="20"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Config<sp/>subcommand:<sp/>llm</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="21"><highlight class="normal"><sp/><sp/><sp/><sp/>llm_config_parser<sp/>=<sp/>parser.add_parser(</highlight><highlight class="stringliteral">&quot;llm-cmd&quot;</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;Configure<sp/>LLM<sp/>settings.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="22"><highlight class="normal"><sp/><sp/><sp/><sp/>llm_config_parser.add_argument(</highlight><highlight class="stringliteral">&quot;--model&quot;</highlight><highlight class="normal">,<sp/>required=</highlight><highlight class="keyword">True</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;LLM<sp/>model<sp/>to<sp/>use&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="23"><highlight class="normal"><sp/><sp/><sp/><sp/>llm_config_parser.add_argument(</highlight><highlight class="stringliteral">&quot;--api-base&quot;</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;API<sp/>base<sp/>URL<sp/>for<sp/>the<sp/>LLM<sp/>service&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="24"><highlight class="normal"><sp/><sp/><sp/><sp/>llm_config_parser.add_argument(</highlight><highlight class="stringliteral">&quot;--api-key&quot;</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;API<sp/>key<sp/>for<sp/>the<sp/>LLM<sp/>service&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="25"><highlight class="normal"></highlight></codeline>
+<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Config<sp/>subcommand:<sp/>llm-web</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="27"><highlight class="normal"><sp/><sp/><sp/><sp/>parser.add_parser(</highlight><highlight class="stringliteral">&quot;llm&quot;</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;Configure<sp/>LLM<sp/>settings<sp/>through<sp/>a<sp/>web<sp/>interface&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="28"><highlight class="normal"></highlight></codeline>
+<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Config<sp/>subcommand:<sp/>jira</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/>jira_config_parser<sp/>=<sp/>parser.add_parser(</highlight><highlight class="stringliteral">&quot;jira-cmd&quot;</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;Configure<sp/>JIRA<sp/>settings.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="31"><highlight class="normal"><sp/><sp/><sp/><sp/>jira_config_parser.add_argument(</highlight><highlight class="stringliteral">&quot;--url&quot;</highlight><highlight class="normal">,<sp/>required=</highlight><highlight class="keyword">True</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;JIRA<sp/>base<sp/>URL&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/>jira_config_parser.add_argument(</highlight><highlight class="stringliteral">&quot;--username&quot;</highlight><highlight class="normal">,<sp/>required=</highlight><highlight class="keyword">True</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;JIRA<sp/>username<sp/>or<sp/>email&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/>jira_config_parser.add_argument(</highlight><highlight class="stringliteral">&quot;--api-token&quot;</highlight><highlight class="normal">,<sp/>required=</highlight><highlight class="keyword">True</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;JIRA<sp/>API<sp/>token&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/>jira_config_parser.add_argument(</highlight><highlight class="stringliteral">&quot;--verify&quot;</highlight><highlight class="normal">,<sp/>action=</highlight><highlight class="stringliteral">&quot;store_true&quot;</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;Verify<sp/>JIRA<sp/>connection&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="35"><highlight class="normal"></highlight></codeline>
+<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Config<sp/>subcommand:<sp/>jira-web</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/>parser.add_parser(</highlight><highlight class="stringliteral">&quot;jira&quot;</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;Configure<sp/>JIRA<sp/>settings<sp/>through<sp/>a<sp/>web<sp/>interface&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="38"><highlight class="normal"></highlight></codeline>
+<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Add<sp/>all<sp/>other<sp/>necessary<sp/>arguments<sp/>for<sp/>config<sp/>command</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="41" refid="namespacepenify__hook_1_1config__command_1a240e5331681eb574ac319d7458783bde" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1config__command_1a240e5331681eb574ac319d7458783bde" kindref="member">handle_config</ref>(args):</highlight></codeline>
+<codeline lineno="42"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Handle<sp/>configuration<sp/>settings<sp/>based<sp/>on<sp/>the<sp/>specified<sp/>config<sp/>type.</highlight></codeline>
+<codeline lineno="43"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="44"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>processes<sp/>different<sp/>types<sp/>of<sp/>configurations<sp/>such<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>LLM</highlight></codeline>
+<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/>(Language<sp/>Model)<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>JIRA.<sp/>It<sp/>saves<sp/>configurations,<sp/>sets<sp/>up<sp/>web-based</highlight></codeline>
+<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/>configurations,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>verifies<sp/>JIRA<sp/>connections.</highlight></codeline>
+<codeline lineno="47"><highlight class="normal"></highlight></codeline>
+<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>args<sp/>(argparse.Namespace):<sp/>Command-line<sp/>arguments<sp/>containing<sp/>the<sp/>type<sp/>of<sp/>configuration<sp/>to<sp/>handle.</highlight></codeline>
+<codeline lineno="50"><highlight class="normal"></highlight></codeline>
+<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>int:<sp/>Exit<sp/>code<sp/>indicating<sp/>success<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/>failure.</highlight></codeline>
+<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="54"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="55"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Only<sp/>import<sp/>dependencies<sp/>needed<sp/>for<sp/>config<sp/>functionality<sp/>here</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="58"><highlight class="normal"></highlight></codeline>
+<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>args.config_type<sp/>==<sp/></highlight><highlight class="stringliteral">&quot;llm-cmd&quot;</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands" kindref="compound">penify_hook.commands.config_commands</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>save_llm_config</highlight></codeline>
+<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a4617bc5956e502c9555dc0dda0376df4" kindref="member">save_llm_config</ref>(args.model,<sp/>args.api_base,<sp/>args.api_key)</highlight></codeline>
+<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;LLM<sp/>configuration<sp/>set:<sp/>Model={args.model},<sp/>API<sp/>Base={args.api_base<sp/>or<sp/>&apos;default&apos;}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="63"><highlight class="normal"></highlight></codeline>
+<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">elif</highlight><highlight class="normal"><sp/>args.config_type<sp/>==<sp/></highlight><highlight class="stringliteral">&quot;llm&quot;</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands" kindref="compound">penify_hook.commands.config_commands</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>config_llm_web</highlight></codeline>
+<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a185dfc34a655ed80e6c95939b6f3c35c" kindref="member">config_llm_web</ref>()</highlight></codeline>
+<codeline lineno="67"><highlight class="normal"></highlight></codeline>
+<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">elif</highlight><highlight class="normal"><sp/>args.config_type<sp/>==<sp/></highlight><highlight class="stringliteral">&quot;jira-cmd&quot;</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands" kindref="compound">penify_hook.commands.config_commands</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>save_jira_config</highlight></codeline>
+<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1ab2486ac2bf16b4a671e49625bfa4f9b4" kindref="member">save_jira_config</ref>(args.url,<sp/>args.username,<sp/>args.api_token)</highlight></codeline>
+<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;JIRA<sp/>configuration<sp/>set:<sp/>URL={args.url},<sp/>Username={args.username}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1jira__client" kindref="compound">penify_hook.jira_client</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>JiraClient<sp/><sp/></highlight><highlight class="comment">#<sp/>Import<sp/>moved<sp/>here</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="73"><highlight class="normal"></highlight></codeline>
+<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Verify<sp/>connection<sp/>if<sp/>requested</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>args.verify:</highlight></codeline>
+<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>JiraClient:</highlight></codeline>
+<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_client<sp/>=<sp/>JiraClient(</highlight></codeline>
+<codeline lineno="78"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_url=args.url,</highlight></codeline>
+<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_user=args.username,</highlight></codeline>
+<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_api_token=args.api_token</highlight></codeline>
+<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>)</highlight></codeline>
+<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>jira_client.is_connected():</highlight></codeline>
+<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(</highlight><highlight class="stringliteral">&quot;JIRA<sp/>connection<sp/>verified<sp/>successfully!&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="85"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(</highlight><highlight class="stringliteral">&quot;Failed<sp/>to<sp/>connect<sp/>to<sp/>JIRA.<sp/>Please<sp/>check<sp/>your<sp/>credentials.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="86"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(</highlight><highlight class="stringliteral">&quot;JIRA<sp/>package<sp/>not<sp/>installed.<sp/>Cannot<sp/>verify<sp/>connection.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="88"><highlight class="normal"></highlight></codeline>
+<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">elif</highlight><highlight class="normal"><sp/>args.config_type<sp/>==<sp/></highlight><highlight class="stringliteral">&quot;jira&quot;</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="90"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands" kindref="compound">penify_hook.commands.config_commands</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>config_jira_web</highlight></codeline>
+<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1af115198ea5d6808ccb98733957f50b06" kindref="member">config_jira_web</ref>()</highlight></codeline>
+<codeline lineno="92"><highlight class="normal"></highlight></codeline>
+<codeline lineno="93"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="94"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(</highlight><highlight class="stringliteral">&quot;Please<sp/>specify<sp/>a<sp/>config<sp/>type:<sp/>llm,<sp/>jira&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="95"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1</highlight></codeline>
+<codeline lineno="96"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="97"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/config_command.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/config__commands_8py.xml b/docs345/xml/config__commands_8py.xml
new file mode 100644
index 0000000..34725a6
--- /dev/null
+++ b/docs345/xml/config__commands_8py.xml
@@ -0,0 +1,597 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="config__commands_8py" kind="file" language="Python">
+    <compoundname>config_commands.py</compoundname>
+    <innernamespace refid="namespacepenify__hook">penify_hook</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1commands">penify_hook::commands</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1commands_1_1config__commands">penify_hook::commands::config_commands</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacepenify__hook_1_1commands_1_1config__commands" refkind="compound"><highlight class="keyword">import</highlight><highlight class="normal"><sp/>json</highlight></codeline>
+<codeline lineno="2"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>os</highlight></codeline>
+<codeline lineno="3"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>random</highlight></codeline>
+<codeline lineno="4"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>webbrowser</highlight></codeline>
+<codeline lineno="5"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>http.server</highlight></codeline>
+<codeline lineno="6"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>socketserver</highlight></codeline>
+<codeline lineno="7"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>pkg_resources</highlight></codeline>
+<codeline lineno="8"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>pathlib<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>Path</highlight></codeline>
+<codeline lineno="9"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>threading<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>Thread</highlight></codeline>
+<codeline lineno="10"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>logging</highlight></codeline>
+<codeline lineno="11"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>sys</highlight></codeline>
+<codeline lineno="12"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>typing<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>Dict,<sp/>Any,<sp/>Optional,<sp/>Union</highlight></codeline>
+<codeline lineno="13"><highlight class="normal"></highlight></codeline>
+<codeline lineno="14"><highlight class="normal"></highlight><highlight class="comment">#<sp/>Try<sp/>to<sp/>import<sp/>dotenv,<sp/>but<sp/>don&apos;t<sp/>fail<sp/>if<sp/>it&apos;s<sp/>not<sp/>available</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="15"><highlight class="normal"></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="16"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>dotenv<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>load_dotenv</highlight></codeline>
+<codeline lineno="17" refid="namespacepenify__hook_1_1commands_1_1config__commands_1a152642ab83cf6219b604bda6122aba67" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>DOTENV_AVAILABLE<sp/>=<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="18"><highlight class="normal"></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>ImportError:</highlight></codeline>
+<codeline lineno="19"><highlight class="normal"><sp/><sp/><sp/><sp/>DOTENV_AVAILABLE<sp/>=<sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="20"><highlight class="normal"></highlight></codeline>
+<codeline lineno="21"><highlight class="normal"></highlight></codeline>
+<codeline lineno="22" refid="namespacepenify__hook_1_1commands_1_1config__commands_1aabe277132ce0bc0aacef951cf1dee2ae" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1aabe277132ce0bc0aacef951cf1dee2ae" kindref="member">load_env_files</ref>()<sp/>-&gt;<sp/>None:</highlight></codeline>
+<codeline lineno="23"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="24"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>Load<sp/>environment<sp/>variables<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>.env<sp/>files<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>various<sp/>locations,</highlight></codeline>
+<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>proper<sp/>priority<sp/>(later<sp/>files<sp/>override<sp/>earlier<sp/>ones):</highlight></codeline>
+<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/>1.<sp/>User<sp/>home<sp/>directory<sp/>.env<sp/>(lowest<sp/>priority)</highlight></codeline>
+<codeline lineno="27"><highlight class="normal"><sp/><sp/><sp/><sp/>2.<sp/>Git<sp/>repo<sp/>root<sp/>directory<sp/>.env<sp/>(</highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>a<sp/>git<sp/>repo)</highlight></codeline>
+<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/>3.<sp/>Current<sp/>directory<sp/>.env<sp/>(highest<sp/>priority)</highlight></codeline>
+<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/>This<sp/>function<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>called<sp/>when<sp/>the<sp/>module<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>imported,<sp/>ensuring<sp/>env<sp/>variables</highlight></codeline>
+<codeline lineno="31"><highlight class="normal"><sp/><sp/><sp/><sp/>are<sp/>available<sp/>throughout<sp/>the<sp/>application<sp/>lifecycle.</highlight></codeline>
+<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="33"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>DOTENV_AVAILABLE:</highlight></codeline>
+<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logging.warning(</highlight><highlight class="stringliteral">&quot;python-dotenv<sp/>is<sp/>not<sp/>installed.<sp/>.env<sp/>file<sp/>loading<sp/>is<sp/>disabled.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logging.warning(</highlight><highlight class="stringliteral">&quot;Run<sp/>&apos;pip<sp/>install<sp/>python-dotenv&apos;<sp/>to<sp/>enable<sp/>.env<sp/>file<sp/>support.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="37"><highlight class="normal"></highlight></codeline>
+<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Load<sp/>from<sp/>user<sp/>home<sp/>directory<sp/>(lowest<sp/>priority)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>home_env<sp/>=<sp/>Path.home()<sp/>/<sp/></highlight><highlight class="stringliteral">&apos;.env&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>home_env.exists():</highlight></codeline>
+<codeline lineno="42"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>load_dotenv(dotenv_path=home_env,<sp/>override=</highlight><highlight class="keyword">False</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logging.warning(f</highlight><highlight class="stringliteral">&quot;Failed<sp/>to<sp/>load<sp/>.env<sp/>from<sp/>home<sp/>directory:<sp/>{str(e)}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Load<sp/>from<sp/>Git<sp/>repo<sp/>root<sp/>(medium<sp/>priority)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1utils" kindref="compound">penify_hook.utils</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>recursive_search_git_folder</highlight></codeline>
+<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>current_dir<sp/>=<sp/>os.getcwd()</highlight></codeline>
+<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>repo_root<sp/>=<sp/><ref refid="namespacepenify__hook_1_1utils_1a95c3f9c80860d6a2e2d061d2fb660a3f" kindref="member">recursive_search_git_folder</ref>(current_dir)</highlight></codeline>
+<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>repo_root<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>repo_root<sp/>!=<sp/>str(Path.home()):</highlight></codeline>
+<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>repo_env<sp/>=<sp/>Path(repo_root)<sp/>/<sp/></highlight><highlight class="stringliteral">&apos;.env&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>repo_env.exists()<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>repo_env<sp/>!=<sp/>home_env:</highlight></codeline>
+<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>load_dotenv(dotenv_path=repo_env,<sp/>override=</highlight><highlight class="keyword">True</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logging.warning(f</highlight><highlight class="stringliteral">&quot;Failed<sp/>to<sp/>load<sp/>.env<sp/>from<sp/>Git<sp/>repo:<sp/>{str(e)}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Load<sp/>from<sp/>current<sp/>directory<sp/>(highest<sp/>priority)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/>current_env<sp/>=<sp/>Path(os.getcwd())<sp/>/<sp/></highlight><highlight class="stringliteral">&apos;.env&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>current_env.exists()<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>repo_root<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/>current_env<sp/>!=<sp/>Path(repo_root)<sp/>/<sp/></highlight><highlight class="stringliteral">&apos;.env&apos;</highlight><highlight class="normal">):</highlight></codeline>
+<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>load_dotenv(dotenv_path=current_env,<sp/>override=</highlight><highlight class="keyword">True</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="62"><highlight class="normal"></highlight></codeline>
+<codeline lineno="63"><highlight class="normal"></highlight></codeline>
+<codeline lineno="64"><highlight class="normal"></highlight><highlight class="comment">#<sp/>Load<sp/>environment<sp/>variables<sp/>when<sp/>module<sp/>is<sp/>imported</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="65"><highlight class="normal"><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1aabe277132ce0bc0aacef951cf1dee2ae" kindref="member">load_env_files</ref>()</highlight></codeline>
+<codeline lineno="66"><highlight class="normal"></highlight></codeline>
+<codeline lineno="67"><highlight class="normal"></highlight></codeline>
+<codeline lineno="68" refid="namespacepenify__hook_1_1commands_1_1config__commands_1a6559a82d0bf727703d550d1003d3ed20" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a6559a82d0bf727703d550d1003d3ed20" kindref="member">get_penify_config</ref>()<sp/>-&gt;<sp/>Path:</highlight></codeline>
+<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Get<sp/>the<sp/>home<sp/>directory<sp/>for<sp/>the<sp/>.penify<sp/>configuration<sp/>file.</highlight></codeline>
+<codeline lineno="70"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="71"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>searches<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>`.penify`<sp/>file<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the<sp/>current<sp/>directory</highlight></codeline>
+<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>its<sp/>parent<sp/>directories<sp/>until<sp/>it<sp/>finds<sp/>it<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/>reaches<sp/>the<sp/>home</highlight></codeline>
+<codeline lineno="73"><highlight class="normal"><sp/><sp/><sp/><sp/>directory.<sp/>If<sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>found,<sp/>it<sp/>creates<sp/>the<sp/>`.penify`<sp/>directory<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>an<sp/>empty</highlight></codeline>
+<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/>`config.json`<sp/>file.</highlight></codeline>
+<codeline lineno="75"><highlight class="normal"></highlight></codeline>
+<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Path:<sp/>The<sp/>path<sp/>to<sp/>the<sp/>`config.json`<sp/>file<sp/>within<sp/>the<sp/>`.penify`<sp/>directory.</highlight></codeline>
+<codeline lineno="78"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="79"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>current_dir<sp/>=<sp/>os.getcwd()</highlight></codeline>
+<codeline lineno="80"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1utils" kindref="compound">penify_hook.utils</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>recursive_search_git_folder</highlight></codeline>
+<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/>home_dir<sp/>=<sp/><ref refid="namespacepenify__hook_1_1utils_1a95c3f9c80860d6a2e2d061d2fb660a3f" kindref="member">recursive_search_git_folder</ref>(current_dir)</highlight></codeline>
+<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="83"><highlight class="normal"></highlight></codeline>
+<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>home_dir:</highlight></codeline>
+<codeline lineno="85"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>home_dir<sp/>=<sp/>Path.home()</highlight></codeline>
+<codeline lineno="86"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>home_dir<sp/>=<sp/>Path(home_dir)</highlight></codeline>
+<codeline lineno="88"><highlight class="normal"></highlight></codeline>
+<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/>penify_dir<sp/>=<sp/>home_dir<sp/>/<sp/></highlight><highlight class="stringliteral">&apos;.penify&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="90"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>penify_dir.exists():</highlight></codeline>
+<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>penify_dir<sp/>/<sp/></highlight><highlight class="stringliteral">&apos;config.json&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="92"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="93"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Create<sp/>the<sp/>.penify<sp/>directory<sp/>if<sp/>it<sp/>doesn&apos;t<sp/>exist</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="94"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>os.makedirs(penify_dir,<sp/>exist_ok=</highlight><highlight class="keyword">True</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="95"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="96"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="97"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Create<sp/>the<sp/>.penify<sp/>directory</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="98"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>os.makedirs(penify_dir,<sp/>exist_ok=</highlight><highlight class="keyword">True</highlight><highlight class="normal">)<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="99"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Create<sp/>an<sp/>empty<sp/>config.json<sp/>file</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="100"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>open(penify_dir<sp/>/<sp/></highlight><highlight class="stringliteral">&apos;config.json&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;w&apos;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>f:</highlight></codeline>
+<codeline lineno="101"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>json.dump({},<sp/>f)</highlight></codeline>
+<codeline lineno="102"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>penify_dir<sp/>/<sp/></highlight><highlight class="stringliteral">&apos;config.json&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="103"><highlight class="normal"></highlight></codeline>
+<codeline lineno="104"><highlight class="normal"></highlight></codeline>
+<codeline lineno="105" refid="namespacepenify__hook_1_1commands_1_1config__commands_1a3caf2b062dd33b1f1d7ddc7224f0ff87" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a3caf2b062dd33b1f1d7ddc7224f0ff87" kindref="member">get_env_var_or_default</ref>(env_var:<sp/>str,<sp/>default:<sp/>Any<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">)<sp/>-&gt;<sp/>Any:</highlight></codeline>
+<codeline lineno="106"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="107"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>Get<sp/>environment<sp/>variable<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>default<sp/>value.</highlight></codeline>
+<codeline lineno="108"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="109"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="110"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>env_var:<sp/>The<sp/>environment<sp/>variable<sp/>name</highlight></codeline>
+<codeline lineno="111"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>default:<sp/>Default<sp/>value<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>environment<sp/>variable<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>set</highlight></codeline>
+<codeline lineno="112"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="113"><highlight class="normal"><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="114"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Value<sp/>of<sp/>the<sp/>environment<sp/>variable<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/>default</highlight></codeline>
+<codeline lineno="115"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="116"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>os.environ.get(env_var,<sp/>default)</highlight></codeline>
+<codeline lineno="117"><highlight class="normal"></highlight></codeline>
+<codeline lineno="118"><highlight class="normal"></highlight></codeline>
+<codeline lineno="119" refid="namespacepenify__hook_1_1commands_1_1config__commands_1a4617bc5956e502c9555dc0dda0376df4" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a4617bc5956e502c9555dc0dda0376df4" kindref="member">save_llm_config</ref>(model,<sp/>api_base,<sp/>api_key):</highlight></codeline>
+<codeline lineno="120"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="121"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>Save<sp/>LLM<sp/>configuration<sp/>settings<sp/>to<sp/>.env<sp/>file.</highlight></codeline>
+<codeline lineno="122"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="123"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>saves<sp/>LLM<sp/>configuration<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the<sp/>following<sp/>priority:</highlight></codeline>
+<codeline lineno="124"><highlight class="normal"><sp/><sp/><sp/><sp/>1.<sp/>Git<sp/>repo<sp/>root<sp/>.env<sp/>(</highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>inside<sp/>a<sp/>git<sp/>repo)</highlight></codeline>
+<codeline lineno="125"><highlight class="normal"><sp/><sp/><sp/><sp/>2.<sp/>User<sp/>home<sp/>directory<sp/>.env</highlight></codeline>
+<codeline lineno="126"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="127"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>pathlib<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>Path</highlight></codeline>
+<codeline lineno="128"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>os</highlight></codeline>
+<codeline lineno="129"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="130"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>DOTENV_AVAILABLE:</highlight></codeline>
+<codeline lineno="131"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(</highlight><highlight class="stringliteral">&quot;python-dotenv<sp/>is<sp/>not<sp/>installed.<sp/>Run<sp/>&apos;pip<sp/>install<sp/>python-dotenv&apos;<sp/>to<sp/>enable<sp/>.env<sp/>file<sp/>support.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="132"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="133"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="134"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Try<sp/>to<sp/>find<sp/>Git<sp/>repo<sp/>root</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="135"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="136"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1utils" kindref="compound">penify_hook.utils</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>recursive_search_git_folder</highlight></codeline>
+<codeline lineno="137"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>current_dir<sp/>=<sp/>os.getcwd()</highlight></codeline>
+<codeline lineno="138"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>repo_root<sp/>=<sp/><ref refid="namespacepenify__hook_1_1utils_1a95c3f9c80860d6a2e2d061d2fb660a3f" kindref="member">recursive_search_git_folder</ref>(current_dir)</highlight></codeline>
+<codeline lineno="139"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>env_file<sp/>=<sp/>Path(repo_root)<sp/>/<sp/></highlight><highlight class="stringliteral">&apos;.env&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>repo_root<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>Path.home()<sp/>/<sp/></highlight><highlight class="stringliteral">&apos;.env&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="140"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="141"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Failed<sp/>to<sp/>determine<sp/>Git<sp/>repo<sp/>root:<sp/>{str(e)}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="142"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>env_file<sp/>=<sp/>Path.home()<sp/>/<sp/></highlight><highlight class="stringliteral">&apos;.env&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="143"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="144"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Read<sp/>existing<sp/>.env<sp/>content</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="145"><highlight class="normal"><sp/><sp/><sp/><sp/>env_content<sp/>=<sp/>{}</highlight></codeline>
+<codeline lineno="146"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>env_file.exists():</highlight></codeline>
+<codeline lineno="147"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>open(env_file,<sp/></highlight><highlight class="stringliteral">&apos;r&apos;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>f:</highlight></codeline>
+<codeline lineno="148"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>line<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>f:</highlight></codeline>
+<codeline lineno="149"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>line<sp/>=<sp/>line.strip()</highlight></codeline>
+<codeline lineno="150"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>line<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>line.startswith(</highlight><highlight class="stringliteral">&apos;#&apos;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;=&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>line:</highlight></codeline>
+<codeline lineno="151"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>key,<sp/>value<sp/>=<sp/>line.split(</highlight><highlight class="stringliteral">&apos;=&apos;</highlight><highlight class="normal">,<sp/>1)</highlight></codeline>
+<codeline lineno="152"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>env_content[key.strip()]<sp/>=<sp/>value.strip()</highlight></codeline>
+<codeline lineno="153"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="154"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Update<sp/>LLM<sp/>configuration</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="155"><highlight class="normal"><sp/><sp/><sp/><sp/>env_content[</highlight><highlight class="stringliteral">&apos;PENIFY_LLM_MODEL&apos;</highlight><highlight class="normal">]<sp/>=<sp/>model</highlight></codeline>
+<codeline lineno="156"><highlight class="normal"><sp/><sp/><sp/><sp/>env_content[</highlight><highlight class="stringliteral">&apos;PENIFY_LLM_API_BASE&apos;</highlight><highlight class="normal">]<sp/>=<sp/>api_base</highlight></codeline>
+<codeline lineno="157"><highlight class="normal"><sp/><sp/><sp/><sp/>env_content[</highlight><highlight class="stringliteral">&apos;PENIFY_LLM_API_KEY&apos;</highlight><highlight class="normal">]<sp/>=<sp/>api_key</highlight></codeline>
+<codeline lineno="158"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="159"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Write<sp/>back<sp/>to<sp/>.env<sp/>file</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="160"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="161"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>open(env_file,<sp/></highlight><highlight class="stringliteral">&apos;w&apos;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>f:</highlight></codeline>
+<codeline lineno="162"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>key,<sp/>value<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>env_content.items():</highlight></codeline>
+<codeline lineno="163"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>f.write(f</highlight><highlight class="stringliteral">&quot;{key}={value}\n&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="164"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;LLM<sp/>configuration<sp/>saved<sp/>to<sp/>{env_file}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="165"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="166"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Reload<sp/>environment<sp/>variables<sp/>to<sp/>make<sp/>changes<sp/>immediately<sp/>available</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="167"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>DOTENV_AVAILABLE:</highlight></codeline>
+<codeline lineno="168"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>dotenv<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>load_dotenv</highlight></codeline>
+<codeline lineno="169"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>load_dotenv(dotenv_path=env_file,<sp/>override=</highlight><highlight class="keyword">True</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="170"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="171"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="172"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="173"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Error<sp/>saving<sp/>LLM<sp/>configuration:<sp/>{str(e)}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="174"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="175"><highlight class="normal"></highlight></codeline>
+<codeline lineno="176"><highlight class="normal"></highlight></codeline>
+<codeline lineno="177" refid="namespacepenify__hook_1_1commands_1_1config__commands_1ab2486ac2bf16b4a671e49625bfa4f9b4" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1ab2486ac2bf16b4a671e49625bfa4f9b4" kindref="member">save_jira_config</ref>(url,<sp/>username,<sp/>api_token):</highlight></codeline>
+<codeline lineno="178"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="179"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>Save<sp/>JIRA<sp/>configuration<sp/>settings<sp/>to<sp/>.env<sp/>file.</highlight></codeline>
+<codeline lineno="180"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="181"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>saves<sp/>JIRA<sp/>configuration<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the<sp/>following<sp/>priority:</highlight></codeline>
+<codeline lineno="182"><highlight class="normal"><sp/><sp/><sp/><sp/>1.<sp/>Git<sp/>repo<sp/>root<sp/>.env<sp/>(</highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>inside<sp/>a<sp/>git<sp/>repo)</highlight></codeline>
+<codeline lineno="183"><highlight class="normal"><sp/><sp/><sp/><sp/>2.<sp/>User<sp/>home<sp/>directory<sp/>.env</highlight></codeline>
+<codeline lineno="184"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="185"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>pathlib<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>Path</highlight></codeline>
+<codeline lineno="186"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>os</highlight></codeline>
+<codeline lineno="187"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="188"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>DOTENV_AVAILABLE:</highlight></codeline>
+<codeline lineno="189"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(</highlight><highlight class="stringliteral">&quot;python-dotenv<sp/>is<sp/>not<sp/>installed.<sp/>Run<sp/>&apos;pip<sp/>install<sp/>python-dotenv&apos;<sp/>to<sp/>enable<sp/>.env<sp/>file<sp/>support.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="190"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="191"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="192"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Try<sp/>to<sp/>find<sp/>Git<sp/>repo<sp/>root</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="193"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="194"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1utils" kindref="compound">penify_hook.utils</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>recursive_search_git_folder</highlight></codeline>
+<codeline lineno="195"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>current_dir<sp/>=<sp/>os.getcwd()</highlight></codeline>
+<codeline lineno="196"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>repo_root<sp/>=<sp/><ref refid="namespacepenify__hook_1_1utils_1a95c3f9c80860d6a2e2d061d2fb660a3f" kindref="member">recursive_search_git_folder</ref>(current_dir)</highlight></codeline>
+<codeline lineno="197"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>env_file<sp/>=<sp/>Path(repo_root)<sp/>/<sp/></highlight><highlight class="stringliteral">&apos;.env&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>repo_root<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>Path.home()<sp/>/<sp/></highlight><highlight class="stringliteral">&apos;.env&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="198"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="199"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Failed<sp/>to<sp/>determine<sp/>Git<sp/>repo<sp/>root:<sp/>{str(e)}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="200"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>env_file<sp/>=<sp/>Path.home()<sp/>/<sp/></highlight><highlight class="stringliteral">&apos;.env&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="201"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="202"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Read<sp/>existing<sp/>.env<sp/>content</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="203"><highlight class="normal"><sp/><sp/><sp/><sp/>env_content<sp/>=<sp/>{}</highlight></codeline>
+<codeline lineno="204"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>env_file.exists():</highlight></codeline>
+<codeline lineno="205"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>open(env_file,<sp/></highlight><highlight class="stringliteral">&apos;r&apos;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>f:</highlight></codeline>
+<codeline lineno="206"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>line<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>f:</highlight></codeline>
+<codeline lineno="207"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>line<sp/>=<sp/>line.strip()</highlight></codeline>
+<codeline lineno="208"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>line<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>line.startswith(</highlight><highlight class="stringliteral">&apos;#&apos;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;=&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>line:</highlight></codeline>
+<codeline lineno="209"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>key,<sp/>value<sp/>=<sp/>line.split(</highlight><highlight class="stringliteral">&apos;=&apos;</highlight><highlight class="normal">,<sp/>1)</highlight></codeline>
+<codeline lineno="210"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>env_content[key.strip()]<sp/>=<sp/>value.strip()</highlight></codeline>
+<codeline lineno="211"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="212"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Update<sp/>JIRA<sp/>configuration</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="213"><highlight class="normal"><sp/><sp/><sp/><sp/>env_content[</highlight><highlight class="stringliteral">&apos;PENIFY_JIRA_URL&apos;</highlight><highlight class="normal">]<sp/>=<sp/>url</highlight></codeline>
+<codeline lineno="214"><highlight class="normal"><sp/><sp/><sp/><sp/>env_content[</highlight><highlight class="stringliteral">&apos;PENIFY_JIRA_USER&apos;</highlight><highlight class="normal">]<sp/>=<sp/>username</highlight></codeline>
+<codeline lineno="215"><highlight class="normal"><sp/><sp/><sp/><sp/>env_content[</highlight><highlight class="stringliteral">&apos;PENIFY_JIRA_TOKEN&apos;</highlight><highlight class="normal">]<sp/>=<sp/>api_token</highlight></codeline>
+<codeline lineno="216"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="217"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Write<sp/>back<sp/>to<sp/>.env<sp/>file</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="218"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="219"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>open(env_file,<sp/></highlight><highlight class="stringliteral">&apos;w&apos;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>f:</highlight></codeline>
+<codeline lineno="220"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>key,<sp/>value<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>env_content.items():</highlight></codeline>
+<codeline lineno="221"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>f.write(f</highlight><highlight class="stringliteral">&quot;{key}={value}\n&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="222"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;JIRA<sp/>configuration<sp/>saved<sp/>to<sp/>{env_file}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="223"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="224"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Reload<sp/>environment<sp/>variables<sp/>to<sp/>make<sp/>changes<sp/>immediately<sp/>available</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="225"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>DOTENV_AVAILABLE:</highlight></codeline>
+<codeline lineno="226"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>dotenv<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>load_dotenv</highlight></codeline>
+<codeline lineno="227"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>load_dotenv(dotenv_path=env_file,<sp/>override=</highlight><highlight class="keyword">True</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="228"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="229"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="230"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="231"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Error<sp/>saving<sp/>JIRA<sp/>configuration:<sp/>{str(e)}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="232"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="233"><highlight class="normal"></highlight></codeline>
+<codeline lineno="234"><highlight class="normal"></highlight></codeline>
+<codeline lineno="235" refid="namespacepenify__hook_1_1commands_1_1config__commands_1a6492bc8e7df6e38bb06ad05e572d4cc0" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a6492bc8e7df6e38bb06ad05e572d4cc0" kindref="member">get_llm_config</ref>()<sp/>-&gt;<sp/>Dict[str,<sp/>str]:</highlight></codeline>
+<codeline lineno="236"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="237"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>Get<sp/>LLM<sp/>configuration<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>environment<sp/>variables.</highlight></codeline>
+<codeline lineno="238"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="239"><highlight class="normal"><sp/><sp/><sp/><sp/>Environment<sp/>variables:</highlight></codeline>
+<codeline lineno="240"><highlight class="normal"><sp/><sp/><sp/><sp/>-<sp/>PENIFY_LLM_MODEL:<sp/>Model<sp/>name</highlight></codeline>
+<codeline lineno="241"><highlight class="normal"><sp/><sp/><sp/><sp/>-<sp/>PENIFY_LLM_API_BASE:<sp/>API<sp/>base<sp/>URL</highlight></codeline>
+<codeline lineno="242"><highlight class="normal"><sp/><sp/><sp/><sp/>-<sp/>PENIFY_LLM_API_KEY:<sp/>API<sp/>key</highlight></codeline>
+<codeline lineno="243"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="244"><highlight class="normal"><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="245"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>dict:<sp/>Configuration<sp/>dictionary<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>model,<sp/>api_base,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>api_key</highlight></codeline>
+<codeline lineno="246"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="247"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Ensure<sp/>environment<sp/>variables<sp/>are<sp/>loaded</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="248"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>DOTENV_AVAILABLE:</highlight></codeline>
+<codeline lineno="249"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1aabe277132ce0bc0aacef951cf1dee2ae" kindref="member">load_env_files</ref>()</highlight></codeline>
+<codeline lineno="250"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="251"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Get<sp/>values<sp/>from<sp/>environment<sp/>variables</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="252"><highlight class="normal"><sp/><sp/><sp/><sp/>config<sp/>=<sp/>{</highlight></codeline>
+<codeline lineno="253"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;model&apos;</highlight><highlight class="normal">:<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a3caf2b062dd33b1f1d7ddc7224f0ff87" kindref="member">get_env_var_or_default</ref>(</highlight><highlight class="stringliteral">&apos;PENIFY_LLM_MODEL&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;&apos;</highlight><highlight class="normal">),</highlight></codeline>
+<codeline lineno="254"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;api_base&apos;</highlight><highlight class="normal">:<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a3caf2b062dd33b1f1d7ddc7224f0ff87" kindref="member">get_env_var_or_default</ref>(</highlight><highlight class="stringliteral">&apos;PENIFY_LLM_API_BASE&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;&apos;</highlight><highlight class="normal">),</highlight></codeline>
+<codeline lineno="255"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;api_key&apos;</highlight><highlight class="normal">:<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a3caf2b062dd33b1f1d7ddc7224f0ff87" kindref="member">get_env_var_or_default</ref>(</highlight><highlight class="stringliteral">&apos;PENIFY_LLM_API_KEY&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="256"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="257"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="258"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Remove<sp/>empty<sp/>values</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="259"><highlight class="normal"><sp/><sp/><sp/><sp/>config<sp/>=<sp/>{k:<sp/>v<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>k,<sp/>v<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>config.items()<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>v}</highlight></codeline>
+<codeline lineno="260"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="261"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>config</highlight></codeline>
+<codeline lineno="262"><highlight class="normal"></highlight></codeline>
+<codeline lineno="263"><highlight class="normal"></highlight></codeline>
+<codeline lineno="264" refid="namespacepenify__hook_1_1commands_1_1config__commands_1a15bf3685c4dcb5c15ba6a4055e484cf2" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a15bf3685c4dcb5c15ba6a4055e484cf2" kindref="member">get_jira_config</ref>()<sp/>-&gt;<sp/>Dict[str,<sp/>str]:</highlight></codeline>
+<codeline lineno="265"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="266"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>Get<sp/>JIRA<sp/>configuration<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>environment<sp/>variables.</highlight></codeline>
+<codeline lineno="267"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="268"><highlight class="normal"><sp/><sp/><sp/><sp/>Environment<sp/>variables:</highlight></codeline>
+<codeline lineno="269"><highlight class="normal"><sp/><sp/><sp/><sp/>-<sp/>PENIFY_JIRA_URL:<sp/>JIRA<sp/>URL</highlight></codeline>
+<codeline lineno="270"><highlight class="normal"><sp/><sp/><sp/><sp/>-<sp/>PENIFY_JIRA_USER:<sp/>JIRA<sp/>username</highlight></codeline>
+<codeline lineno="271"><highlight class="normal"><sp/><sp/><sp/><sp/>-<sp/>PENIFY_JIRA_TOKEN:<sp/>JIRA<sp/>API<sp/>token</highlight></codeline>
+<codeline lineno="272"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="273"><highlight class="normal"><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="274"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>dict:<sp/>Configuration<sp/>dictionary<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>url,<sp/>username,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>api_token</highlight></codeline>
+<codeline lineno="275"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="276"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Ensure<sp/>environment<sp/>variables<sp/>are<sp/>loaded</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="277"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>DOTENV_AVAILABLE:</highlight></codeline>
+<codeline lineno="278"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1aabe277132ce0bc0aacef951cf1dee2ae" kindref="member">load_env_files</ref>()</highlight></codeline>
+<codeline lineno="279"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="280"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Get<sp/>values<sp/>from<sp/>environment<sp/>variables</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="281"><highlight class="normal"><sp/><sp/><sp/><sp/>config<sp/>=<sp/>{</highlight></codeline>
+<codeline lineno="282"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;url&apos;</highlight><highlight class="normal">:<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a3caf2b062dd33b1f1d7ddc7224f0ff87" kindref="member">get_env_var_or_default</ref>(</highlight><highlight class="stringliteral">&apos;PENIFY_JIRA_URL&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;&apos;</highlight><highlight class="normal">),</highlight></codeline>
+<codeline lineno="283"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;username&apos;</highlight><highlight class="normal">:<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a3caf2b062dd33b1f1d7ddc7224f0ff87" kindref="member">get_env_var_or_default</ref>(</highlight><highlight class="stringliteral">&apos;PENIFY_JIRA_USER&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;&apos;</highlight><highlight class="normal">),</highlight></codeline>
+<codeline lineno="284"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;api_token&apos;</highlight><highlight class="normal">:<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a3caf2b062dd33b1f1d7ddc7224f0ff87" kindref="member">get_env_var_or_default</ref>(</highlight><highlight class="stringliteral">&apos;PENIFY_JIRA_TOKEN&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="285"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="286"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="287"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Remove<sp/>empty<sp/>values</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="288"><highlight class="normal"><sp/><sp/><sp/><sp/>config<sp/>=<sp/>{k:<sp/>v<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>k,<sp/>v<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>config.items()<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>v}</highlight></codeline>
+<codeline lineno="289"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="290"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>config</highlight></codeline>
+<codeline lineno="291"><highlight class="normal"></highlight></codeline>
+<codeline lineno="292"><highlight class="normal"></highlight></codeline>
+<codeline lineno="293" refid="namespacepenify__hook_1_1commands_1_1config__commands_1a185dfc34a655ed80e6c95939b6f3c35c" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a185dfc34a655ed80e6c95939b6f3c35c" kindref="member">config_llm_web</ref>():</highlight></codeline>
+<codeline lineno="294"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Open<sp/>a<sp/>web<sp/>browser<sp/>interface<sp/>for<sp/>configuring<sp/>LLM<sp/>settings.</highlight></codeline>
+<codeline lineno="295"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="296"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>starts<sp/>a<sp/>temporary<sp/>HTTP<sp/>server<sp/>that<sp/>serves<sp/>an<sp/>HTML</highlight></codeline>
+<codeline lineno="297"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>template<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>configuring<sp/>Large<sp/>Language<sp/>Model<sp/>(LLM)<sp/>settings.<sp/>It<sp/>handles</highlight></codeline>
+<codeline lineno="298"><highlight class="normal"><sp/><sp/><sp/><sp/>GET<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>POST<sp/>requests<sp/>to<sp/>retrieve<sp/>the<sp/>current<sp/>configuration,<sp/>save<sp/>new</highlight></codeline>
+<codeline lineno="299"><highlight class="normal"><sp/><sp/><sp/><sp/>configurations,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>suppress<sp/>log<sp/>messages.<sp/><sp/>The<sp/>server<sp/>runs<sp/>on<sp/>a<sp/>random</highlight></codeline>
+<codeline lineno="300"><highlight class="normal"><sp/><sp/><sp/><sp/>port<sp/>between<sp/>30000<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>50000,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>it<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>accessible<sp/>via<sp/>a<sp/>URL<sp/>like</highlight></codeline>
+<codeline lineno="301"><highlight class="normal"><sp/><sp/><sp/><sp/>http://localhost:&lt;redirect_port&gt;.<sp/>The<sp/>function<sp/>opens<sp/>this<sp/>URL<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the</highlight></codeline>
+<codeline lineno="302"><highlight class="normal"><sp/><sp/><sp/><sp/>default<sp/>web<sp/>browser<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>configuration.<sp/>Once<sp/>configured,<sp/>the<sp/>server<sp/>shuts</highlight></codeline>
+<codeline lineno="303"><highlight class="normal"><sp/><sp/><sp/><sp/>down.</highlight></codeline>
+<codeline lineno="304"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="305"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>redirect_port<sp/>=<sp/>random.randint(30000,<sp/>50000)</highlight></codeline>
+<codeline lineno="306"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>server_url<sp/>=<sp/>f&quot;http://localhost:{redirect_port}&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="307"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="308"><highlight class="normal"><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Starting<sp/>configuration<sp/>server<sp/>on<sp/>{server_url}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="309"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="310"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal">ConfigHandler(http.server.SimpleHTTPRequestHandler):</highlight></codeline>
+<codeline lineno="311"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal">do_GET(self):</highlight></codeline>
+<codeline lineno="312"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Handle<sp/>HTTP<sp/>GET<sp/>requests.</highlight></codeline>
+<codeline lineno="313"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="314"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>processes<sp/>incoming<sp/>GET<sp/>requests<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>sends<sp/>appropriate</highlight></codeline>
+<codeline lineno="315"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>responses<sp/>based<sp/>on<sp/>the<sp/>requested<sp/>path.<sp/>It<sp/>serves<sp/>an<sp/>HTML<sp/>template<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="316"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>the<sp/>root<sp/>path<sp/>(</highlight><highlight class="stringliteral">&quot;/&quot;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>returns<sp/>a<sp/>JSON<sp/>response<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>the<sp/>current<sp/>LLM</highlight></codeline>
+<codeline lineno="317"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>configuration<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/></highlight><highlight class="stringliteral">&quot;/get_config&quot;</highlight><highlight class="normal"><sp/>path.<sp/>For<sp/>any<sp/>other<sp/>paths,<sp/>it</highlight></codeline>
+<codeline lineno="318"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>returns<sp/>a<sp/></highlight><highlight class="stringliteral">&quot;Not<sp/>Found&quot;</highlight><highlight class="normal"><sp/>error.</highlight></codeline>
+<codeline lineno="319"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="320"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="321" refid="namespacepenify__hook_1_1commands_1_1config__commands_1a4b202072a3a3b8515c9c254622e9c880" refkind="member"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>self.path<sp/>==<sp/></highlight><highlight class="stringliteral">&quot;/&quot;</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="322"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_response(200)</highlight></codeline>
+<codeline lineno="323"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_header(</highlight><highlight class="stringliteral">&quot;Content-type&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;text/html&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="324"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.end_headers()</highlight></codeline>
+<codeline lineno="325"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="326"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Read<sp/>the<sp/>template<sp/>HTML<sp/>file</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="327"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>template_path<sp/>=<sp/>pkg_resources.resource_filename(</highlight></codeline>
+<codeline lineno="328"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;penify_hook&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;templates/llm_config.html&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="329"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>)</highlight></codeline>
+<codeline lineno="330"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="331"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>open(template_path,<sp/></highlight><highlight class="stringliteral">&apos;r&apos;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>f:</highlight></codeline>
+<codeline lineno="332"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>content<sp/>=<sp/>f.read()</highlight></codeline>
+<codeline lineno="333"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="334"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.wfile.write(content.encode())</highlight></codeline>
+<codeline lineno="335"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">elif</highlight><highlight class="normal"><sp/>self.path<sp/>==<sp/></highlight><highlight class="stringliteral">&quot;/get_config&quot;</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="336"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_response(200)</highlight></codeline>
+<codeline lineno="337"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_header(</highlight><highlight class="stringliteral">&quot;Content-type&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;application/json&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="338"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.end_headers()</highlight></codeline>
+<codeline lineno="339"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="340"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Get<sp/>current<sp/>LLM<sp/>configuration</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="341"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>current_config<sp/>=<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a6492bc8e7df6e38bb06ad05e572d4cc0" kindref="member">get_llm_config</ref>()</highlight></codeline>
+<codeline lineno="342"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="343"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>current_config:</highlight></codeline>
+<codeline lineno="344"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>response<sp/>=<sp/>{</highlight></codeline>
+<codeline lineno="345"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;success&quot;</highlight><highlight class="normal">:<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="346"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;config&quot;</highlight><highlight class="normal">:<sp/>current_config</highlight></codeline>
+<codeline lineno="347"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="348"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="349"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>response<sp/>=<sp/>{</highlight></codeline>
+<codeline lineno="350"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;success&quot;</highlight><highlight class="normal">:<sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="351"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;message&quot;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&quot;No<sp/>configuration<sp/>found&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="352"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="353"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="354"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.wfile.write(json.dumps(response).encode())</highlight></codeline>
+<codeline lineno="355"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="356"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_response(404)</highlight></codeline>
+<codeline lineno="357"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_header(</highlight><highlight class="stringliteral">&quot;Content-type&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;text/plain&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="358"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.end_headers()</highlight></codeline>
+<codeline lineno="359"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.wfile.write(b</highlight><highlight class="stringliteral">&quot;Not<sp/>Found&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="360"><highlight class="normal"></highlight></codeline>
+<codeline lineno="361"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal">do_POST(self):</highlight></codeline>
+<codeline lineno="362"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Handle<sp/>POST<sp/>requests<sp/>on<sp/>the<sp/>/save<sp/>endpoint.</highlight></codeline>
+<codeline lineno="363"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="364"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>method<sp/>processes<sp/>incoming<sp/>POST<sp/>requests<sp/>to<sp/>save<sp/>language<sp/>model</highlight></codeline>
+<codeline lineno="365"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>configuration<sp/>data.<sp/>It<sp/>extracts<sp/>the<sp/>necessary<sp/>parameters<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>the</highlight></codeline>
+<codeline lineno="366"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>request<sp/>body,<sp/>saves<sp/>the<sp/>configuration<sp/>using<sp/>the<sp/>provided<sp/>details,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="367"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>then<sp/>schedules<sp/>the<sp/>server<sp/>to<sp/>shut<sp/>down<sp/>after<sp/>a<sp/>successful<sp/>save.</highlight></codeline>
+<codeline lineno="368"><highlight class="normal"></highlight></codeline>
+<codeline lineno="369"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="370"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self<sp/>(HTTPRequestHandler):<sp/>The<sp/>instance<sp/>of<sp/>the<sp/>HTTPRequestHandler<sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal">handling<sp/>the<sp/>request.</highlight></codeline>
+<codeline lineno="371"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="372"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="373"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>self.path<sp/>==<sp/></highlight><highlight class="stringliteral">&quot;/save&quot;</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="374"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>content_length<sp/>=<sp/>int(self.headers[</highlight><highlight class="stringliteral">&apos;Content-Length&apos;</highlight><highlight class="normal">])</highlight></codeline>
+<codeline lineno="375"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>post_data<sp/>=<sp/>self.rfile.read(content_length)</highlight></codeline>
+<codeline lineno="376"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>data<sp/>=<sp/>json.loads(post_data.decode())</highlight></codeline>
+<codeline lineno="377"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="378"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>model<sp/>=<sp/>data.get(</highlight><highlight class="stringliteral">&apos;model&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="379"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_base<sp/>=<sp/>data.get(</highlight><highlight class="stringliteral">&apos;api_base&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="380"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_key<sp/>=<sp/>data.get(</highlight><highlight class="stringliteral">&apos;api_key&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="381"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="382"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="383"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a4617bc5956e502c9555dc0dda0376df4" kindref="member">save_llm_config</ref>(model,<sp/>api_base,<sp/>api_key)</highlight></codeline>
+<codeline lineno="384"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="385"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_response(200)</highlight></codeline>
+<codeline lineno="386"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_header(</highlight><highlight class="stringliteral">&quot;Content-type&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;application/json&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="387"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.end_headers()</highlight></codeline>
+<codeline lineno="388"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>response<sp/>=<sp/>{</highlight></codeline>
+<codeline lineno="389"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;success&quot;</highlight><highlight class="normal">:<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal">,<sp/></highlight></codeline>
+<codeline lineno="390"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;message&quot;</highlight><highlight class="normal">:<sp/>f</highlight><highlight class="stringliteral">&quot;LLM<sp/>configuration<sp/>saved<sp/>successfully.<sp/>Using<sp/>model:<sp/>{model}&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="391"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="392"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.wfile.write(json.dumps(response).encode())</highlight></codeline>
+<codeline lineno="393"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="394"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Schedule<sp/>the<sp/>server<sp/>shutdown</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="395"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>thread<sp/>=<sp/>Thread(target=self.server.shutdown)</highlight></codeline>
+<codeline lineno="396"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>thread.daemon<sp/>=<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="397"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>thread.start()</highlight></codeline>
+<codeline lineno="398"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="399"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="400"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_response(500)</highlight></codeline>
+<codeline lineno="401"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_header(</highlight><highlight class="stringliteral">&quot;Content-type&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;application/json&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="402"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.end_headers()</highlight></codeline>
+<codeline lineno="403"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>response<sp/>=<sp/>{</highlight><highlight class="stringliteral">&quot;success&quot;</highlight><highlight class="normal">:<sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;message&quot;</highlight><highlight class="normal">:<sp/>f</highlight><highlight class="stringliteral">&quot;Error<sp/>saving<sp/>configuration:<sp/>{str(e)}&quot;</highlight><highlight class="normal">}</highlight></codeline>
+<codeline lineno="404"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.wfile.write(json.dumps(response).encode())</highlight></codeline>
+<codeline lineno="405"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="406"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_response(404)</highlight></codeline>
+<codeline lineno="407"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_header(</highlight><highlight class="stringliteral">&quot;Content-type&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;application/json&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="408"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.end_headers()</highlight></codeline>
+<codeline lineno="409"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.wfile.write(json.dumps({</highlight><highlight class="stringliteral">&quot;success&quot;</highlight><highlight class="normal">:<sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;message&quot;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&quot;Not<sp/>Found&quot;</highlight><highlight class="normal">}).encode())</highlight></codeline>
+<codeline lineno="410"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="411"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal">log_message(self,<sp/>format,<sp/>*args):</highlight></codeline>
+<codeline lineno="412"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Suppress<sp/>log<sp/>messages</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="413"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="414"><highlight class="normal"></highlight></codeline>
+<codeline lineno="415"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>socketserver.TCPServer((</highlight><highlight class="stringliteral">&quot;&quot;</highlight><highlight class="normal">,<sp/>redirect_port),<sp/>ConfigHandler)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>httpd:</highlight></codeline>
+<codeline lineno="416"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Opening<sp/>configuration<sp/>page<sp/>in<sp/>your<sp/>browser...&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="417"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>webbrowser.open(server_url)</highlight></codeline>
+<codeline lineno="418"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Waiting<sp/>for<sp/>configuration<sp/>to<sp/>be<sp/>submitted...&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="419"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>httpd.serve_forever()</highlight></codeline>
+<codeline lineno="420"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="421"><highlight class="normal"><sp/><sp/><sp/><sp/>print(</highlight><highlight class="stringliteral">&quot;Configuration<sp/>completed.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="422"><highlight class="normal"></highlight></codeline>
+<codeline lineno="423"><highlight class="normal"></highlight></codeline>
+<codeline lineno="424" refid="namespacepenify__hook_1_1commands_1_1config__commands_1af115198ea5d6808ccb98733957f50b06" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1af115198ea5d6808ccb98733957f50b06" kindref="member">config_jira_web</ref>():</highlight></codeline>
+<codeline lineno="425"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Open<sp/>a<sp/>web<sp/>browser<sp/>interface<sp/>for<sp/>configuring<sp/>JIRA<sp/>settings.</highlight></codeline>
+<codeline lineno="426"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="427"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>sets<sp/>up<sp/>a<sp/>simple<sp/>HTTP<sp/>server<sp/>using<sp/>Python&apos;s<sp/>built-in</highlight></codeline>
+<codeline lineno="428"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>`http.server`<sp/>module<sp/>to<sp/>handle<sp/>GET<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>POST<sp/>requests.<sp/>The<sp/>server<sp/>serves</highlight></codeline>
+<codeline lineno="429"><highlight class="normal"><sp/><sp/><sp/><sp/>an<sp/>HTML<sp/>page<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>configuration<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>handles<sp/>saving<sp/>the<sp/>JIRA<sp/>configuration</highlight></codeline>
+<codeline lineno="430"><highlight class="normal"><sp/><sp/><sp/><sp/>details<sp/>through<sp/>API<sp/>tokens<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>URLs.<sp/>Upon<sp/>successful<sp/>configuration,<sp/>it</highlight></codeline>
+<codeline lineno="431"><highlight class="normal"><sp/><sp/><sp/><sp/>shuts<sp/>down<sp/>the<sp/>server<sp/>gracefully.</highlight></codeline>
+<codeline lineno="432"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="433"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>redirect_port<sp/>=<sp/>random.randint(30000,<sp/>50000)</highlight></codeline>
+<codeline lineno="434"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>server_url<sp/>=<sp/>f&quot;http://localhost:{redirect_port}&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="435"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="436"><highlight class="normal"><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Starting<sp/>configuration<sp/>server<sp/>on<sp/>{server_url}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="437"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="438"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal">ConfigHandler(http.server.SimpleHTTPRequestHandler):</highlight></codeline>
+<codeline lineno="439"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal">do_GET(self):</highlight></codeline>
+<codeline lineno="440"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Handle<sp/>GET<sp/>requests<sp/>for<sp/>different<sp/>paths.</highlight></codeline>
+<codeline lineno="441"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="442"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>processes<sp/>GET<sp/>requests<sp/>based<sp/>on<sp/>the<sp/>path<sp/>requested.<sp/>It</highlight></codeline>
+<codeline lineno="443"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>serves<sp/>an<sp/>HTML<sp/>template<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>root<sp/>path,<sp/>returns<sp/>a<sp/>JSON<sp/>configuration</highlight></codeline>
+<codeline lineno="444"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>a<sp/>specific<sp/>endpoint,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>handles<sp/>any<sp/>other<sp/>paths<sp/>by<sp/>returning<sp/>a<sp/>404</highlight></codeline>
+<codeline lineno="445"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>error.</highlight></codeline>
+<codeline lineno="446"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="447"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="448"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>self.path<sp/>==<sp/></highlight><highlight class="stringliteral">&quot;/&quot;</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="449"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_response(200)</highlight></codeline>
+<codeline lineno="450"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_header(</highlight><highlight class="stringliteral">&quot;Content-type&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;text/html&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="451"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.end_headers()</highlight></codeline>
+<codeline lineno="452"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="453"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Read<sp/>the<sp/>template<sp/>HTML<sp/>file</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="454"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>template_path<sp/>=<sp/>pkg_resources.resource_filename(</highlight></codeline>
+<codeline lineno="455"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;penify_hook&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;templates/jira_config.html&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="456"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>)</highlight></codeline>
+<codeline lineno="457"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="458"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>open(template_path,<sp/></highlight><highlight class="stringliteral">&apos;r&apos;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>f:</highlight></codeline>
+<codeline lineno="459"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>content<sp/>=<sp/>f.read()</highlight></codeline>
+<codeline lineno="460"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="461"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.wfile.write(content.encode())</highlight></codeline>
+<codeline lineno="462"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">elif</highlight><highlight class="normal"><sp/>self.path<sp/>==<sp/></highlight><highlight class="stringliteral">&quot;/get_config&quot;</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="463"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_response(200)</highlight></codeline>
+<codeline lineno="464"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_header(</highlight><highlight class="stringliteral">&quot;Content-type&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;application/json&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="465"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.end_headers()</highlight></codeline>
+<codeline lineno="466"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="467"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Get<sp/>current<sp/>JIRA<sp/>configuration</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="468"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>current_config<sp/>=<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a15bf3685c4dcb5c15ba6a4055e484cf2" kindref="member">get_jira_config</ref>()</highlight></codeline>
+<codeline lineno="469"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="470"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>current_config:</highlight></codeline>
+<codeline lineno="471"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>response<sp/>=<sp/>{</highlight></codeline>
+<codeline lineno="472"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;success&quot;</highlight><highlight class="normal">:<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="473"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;config&quot;</highlight><highlight class="normal">:<sp/>current_config</highlight></codeline>
+<codeline lineno="474"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="475"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="476"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>response<sp/>=<sp/>{</highlight></codeline>
+<codeline lineno="477"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;success&quot;</highlight><highlight class="normal">:<sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="478"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;message&quot;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&quot;No<sp/>JIRA<sp/>configuration<sp/>found&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="479"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="480"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="481"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.wfile.write(json.dumps(response).encode())</highlight></codeline>
+<codeline lineno="482"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="483"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_response(404)</highlight></codeline>
+<codeline lineno="484"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_header(</highlight><highlight class="stringliteral">&quot;Content-type&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;text/plain&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="485"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.end_headers()</highlight></codeline>
+<codeline lineno="486"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.wfile.write(b</highlight><highlight class="stringliteral">&quot;Not<sp/>Found&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="487"><highlight class="normal"></highlight></codeline>
+<codeline lineno="488"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal">do_POST(self):</highlight></codeline>
+<codeline lineno="489"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Handle<sp/>HTTP<sp/>POST<sp/>requests<sp/>to<sp/>save<sp/>JIRA<sp/>configuration.</highlight></codeline>
+<codeline lineno="490"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="491"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>method<sp/>processes<sp/>incoming<sp/>POST<sp/>requests<sp/>to<sp/>save<sp/>JIRA<sp/>configuration</highlight></codeline>
+<codeline lineno="492"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>details.<sp/>It<sp/>reads<sp/>JSON<sp/>data<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>the<sp/>request<sp/>body,<sp/>extracts<sp/>necessary</highlight></codeline>
+<codeline lineno="493"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>parameters<sp/>(URL,<sp/>username,<sp/>API<sp/>token,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>verify),<sp/>saves<sp/>the</highlight></codeline>
+<codeline lineno="494"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>configuration<sp/>using<sp/>the<sp/>`save_jira_config`<sp/>function,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>responds<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="495"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>success<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/>error<sp/>messages.<sp/>If<sp/>an<sp/>exception<sp/>occurs<sp/>during<sp/>the<sp/>process,<sp/>it</highlight></codeline>
+<codeline lineno="496"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>sends<sp/>a<sp/>500<sp/>Internal<sp/>Server<sp/>Error<sp/>response.</highlight></codeline>
+<codeline lineno="497"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="498"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="499"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>self.path<sp/>==<sp/></highlight><highlight class="stringliteral">&quot;/save&quot;</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="500"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>content_length<sp/>=<sp/>int(self.headers[</highlight><highlight class="stringliteral">&apos;Content-Length&apos;</highlight><highlight class="normal">])</highlight></codeline>
+<codeline lineno="501"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>post_data<sp/>=<sp/>self.rfile.read(content_length)</highlight></codeline>
+<codeline lineno="502"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>data<sp/>=<sp/>json.loads(post_data.decode())</highlight></codeline>
+<codeline lineno="503"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="504"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>url<sp/>=<sp/>data.get(</highlight><highlight class="stringliteral">&apos;url&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="505"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>username<sp/>=<sp/>data.get(</highlight><highlight class="stringliteral">&apos;username&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="506"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_token<sp/>=<sp/>data.get(</highlight><highlight class="stringliteral">&apos;api_token&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="507"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>verify<sp/>=<sp/>data.get(</highlight><highlight class="stringliteral">&apos;verify&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="508"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="509"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="510"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Save<sp/>the<sp/>configuration</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="511"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1ab2486ac2bf16b4a671e49625bfa4f9b4" kindref="member">save_jira_config</ref>(url,<sp/>username,<sp/>api_token)</highlight></codeline>
+<codeline lineno="512"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="513"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Verify<sp/>connection<sp/>option<sp/>is<sp/>handled<sp/>in<sp/>main.py</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="514"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_response(200)</highlight></codeline>
+<codeline lineno="515"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_header(</highlight><highlight class="stringliteral">&quot;Content-type&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;application/json&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="516"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.end_headers()</highlight></codeline>
+<codeline lineno="517"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>response<sp/>=<sp/>{</highlight></codeline>
+<codeline lineno="518"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;success&quot;</highlight><highlight class="normal">:<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal">,<sp/></highlight></codeline>
+<codeline lineno="519"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;message&quot;</highlight><highlight class="normal">:<sp/>f</highlight><highlight class="stringliteral">&quot;JIRA<sp/>configuration<sp/>saved<sp/>successfully.&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="520"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="521"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.wfile.write(json.dumps(response).encode())</highlight></codeline>
+<codeline lineno="522"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="523"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Schedule<sp/>the<sp/>server<sp/>shutdown</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="524"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>thread<sp/>=<sp/>Thread(target=self.server.shutdown)</highlight></codeline>
+<codeline lineno="525"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>thread.daemon<sp/>=<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="526"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>thread.start()</highlight></codeline>
+<codeline lineno="527"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="528"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="529"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_response(500)</highlight></codeline>
+<codeline lineno="530"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_header(</highlight><highlight class="stringliteral">&quot;Content-type&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;application/json&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="531"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.end_headers()</highlight></codeline>
+<codeline lineno="532"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>response<sp/>=<sp/>{</highlight><highlight class="stringliteral">&quot;success&quot;</highlight><highlight class="normal">:<sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;message&quot;</highlight><highlight class="normal">:<sp/>f</highlight><highlight class="stringliteral">&quot;Error<sp/>saving<sp/>configuration:<sp/>{str(e)}&quot;</highlight><highlight class="normal">}</highlight></codeline>
+<codeline lineno="533"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.wfile.write(json.dumps(response).encode())</highlight></codeline>
+<codeline lineno="534"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="535"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_response(404)</highlight></codeline>
+<codeline lineno="536"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_header(</highlight><highlight class="stringliteral">&quot;Content-type&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;application/json&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="537"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.end_headers()</highlight></codeline>
+<codeline lineno="538"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.wfile.write(json.dumps({</highlight><highlight class="stringliteral">&quot;success&quot;</highlight><highlight class="normal">:<sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;message&quot;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&quot;Not<sp/>Found&quot;</highlight><highlight class="normal">}).encode())</highlight></codeline>
+<codeline lineno="539"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="540"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal">log_message(self,<sp/>format,<sp/>*args):</highlight></codeline>
+<codeline lineno="541"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Suppress<sp/>log<sp/>messages</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="542"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="543"><highlight class="normal"></highlight></codeline>
+<codeline lineno="544"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>socketserver.TCPServer((</highlight><highlight class="stringliteral">&quot;&quot;</highlight><highlight class="normal">,<sp/>redirect_port),<sp/>ConfigHandler)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>httpd:</highlight></codeline>
+<codeline lineno="545"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Opening<sp/>configuration<sp/>page<sp/>in<sp/>your<sp/>browser...&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="546"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>webbrowser.open(server_url)</highlight></codeline>
+<codeline lineno="547"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Waiting<sp/>for<sp/>configuration<sp/>to<sp/>be<sp/>submitted...&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="548"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>httpd.serve_forever()</highlight></codeline>
+<codeline lineno="549"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="550"><highlight class="normal"><sp/><sp/><sp/><sp/>print(</highlight><highlight class="stringliteral">&quot;Configuration<sp/>completed.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="551"><highlight class="normal"></highlight></codeline>
+<codeline lineno="552"><highlight class="normal"></highlight></codeline>
+<codeline lineno="553" refid="namespacepenify__hook_1_1commands_1_1config__commands_1a5503d51c905e2f1b299b12d2a73bd812" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a5503d51c905e2f1b299b12d2a73bd812" kindref="member">get_token</ref>()<sp/>-&gt;<sp/>Optional[str]:</highlight></codeline>
+<codeline lineno="554"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="555"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>Get<sp/>the<sp/>API<sp/>token<sp/>based<sp/>on<sp/>priority:</highlight></codeline>
+<codeline lineno="556"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>1.<sp/>Environment<sp/>variable<sp/>PENIFY_API_TOKEN<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>any<sp/>.env<sp/>file</highlight></codeline>
+<codeline lineno="557"><highlight class="normal"><sp/><sp/><sp/><sp/>2.<sp/>Config<sp/>file<sp/></highlight><highlight class="stringliteral">&apos;api_keys&apos;</highlight><highlight class="normal"><sp/>value</highlight></codeline>
+<codeline lineno="558"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="559"><highlight class="normal"><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="560"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>str<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">:<sp/>API<sp/>token<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>found,<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"><sp/>otherwise</highlight></codeline>
+<codeline lineno="561"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="562"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Ensure<sp/>environment<sp/>variables<sp/>are<sp/>loaded<sp/>from<sp/>all<sp/>.env<sp/>files</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="563"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>DOTENV_AVAILABLE:</highlight></codeline>
+<codeline lineno="564"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1aabe277132ce0bc0aacef951cf1dee2ae" kindref="member">load_env_files</ref>()</highlight></codeline>
+<codeline lineno="565"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="566"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Check<sp/>environment<sp/>variable<sp/>first</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="567"><highlight class="normal"><sp/><sp/><sp/><sp/>env_token<sp/>=<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a3caf2b062dd33b1f1d7ddc7224f0ff87" kindref="member">get_env_var_or_default</ref>(</highlight><highlight class="stringliteral">&apos;PENIFY_API_TOKEN&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="568"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>env_token:</highlight></codeline>
+<codeline lineno="569"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>env_token</highlight></codeline>
+<codeline lineno="570"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="571"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Check<sp/>config<sp/>file</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="572"><highlight class="normal"><sp/><sp/><sp/><sp/>config_file<sp/>=<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a6559a82d0bf727703d550d1003d3ed20" kindref="member">get_penify_config</ref>()</highlight></codeline>
+<codeline lineno="573"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>config_file.exists():</highlight></codeline>
+<codeline lineno="574"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="575"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>open(config_file,<sp/></highlight><highlight class="stringliteral">&apos;r&apos;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>f:</highlight></codeline>
+<codeline lineno="576"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>config<sp/>=<sp/>json.load(f)</highlight></codeline>
+<codeline lineno="577"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>config.get(</highlight><highlight class="stringliteral">&apos;api_keys&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="578"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>(json.JSONDecodeError,<sp/>Exception)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="579"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Error<sp/>reading<sp/>.penify<sp/>config<sp/>file:<sp/>{str(e)}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="580"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="581"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/conftest_8py.xml b/docs345/xml/conftest_8py.xml
new file mode 100644
index 0000000..1f83991
--- /dev/null
+++ b/docs345/xml/conftest_8py.xml
@@ -0,0 +1,23 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="conftest_8py" kind="file" language="Python">
+    <compoundname>conftest.py</compoundname>
+    <innernamespace refid="namespacetests">tests</innernamespace>
+    <innernamespace refid="namespacetests_1_1conftest">tests::conftest</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacetests_1_1conftest" refkind="compound"><highlight class="keyword">import</highlight><highlight class="normal"><sp/>pytest</highlight></codeline>
+<codeline lineno="2"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>os</highlight></codeline>
+<codeline lineno="3"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>sys</highlight></codeline>
+<codeline lineno="4"><highlight class="normal"></highlight></codeline>
+<codeline lineno="5"><highlight class="normal"></highlight><highlight class="comment">#<sp/>Add<sp/>project<sp/>root<sp/>to<sp/>sys.path<sp/>for<sp/>imports<sp/>to<sp/>work</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="6"><highlight class="normal">sys.path.insert(0,<sp/>os.path.abspath(os.path.join(os.path.dirname(__file__),<sp/></highlight><highlight class="stringliteral">&apos;..&apos;</highlight><highlight class="normal">)))</highlight></codeline>
+<codeline lineno="7"><highlight class="normal"></highlight></codeline>
+<codeline lineno="8"><highlight class="normal"></highlight><highlight class="comment">#<sp/>Common<sp/>fixtures<sp/>can<sp/>be<sp/>added<sp/>here</highlight><highlight class="normal"></highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/conftest.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/constants_8py.xml b/docs345/xml/constants_8py.xml
new file mode 100644
index 0000000..ba635e1
--- /dev/null
+++ b/docs345/xml/constants_8py.xml
@@ -0,0 +1,17 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="constants_8py" kind="file" language="Python">
+    <compoundname>constants.py</compoundname>
+    <innernamespace refid="namespacepenify__hook">penify_hook</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1constants">penify_hook::constants</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacepenify__hook_1_1constants_1af198b5d1fc2f44657a2061aa324af3e0" refkind="member"><highlight class="normal">API_URL<sp/>=<sp/></highlight><highlight class="stringliteral">&apos;http://localhost:8000/api&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="2" refid="namespacepenify__hook_1_1constants_1a316c5a606e4440fb8224c6544c3a15f0" refkind="member"><highlight class="normal">DASHBOARD_URL<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;https://dashboard.penify.dev/auth/localhost/login&quot;</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/constants.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/detailed-usage_8md.xml b/docs345/xml/detailed-usage_8md.xml
new file mode 100644
index 0000000..cb55f77
--- /dev/null
+++ b/docs345/xml/detailed-usage_8md.xml
@@ -0,0 +1,173 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="detailed-usage_8md" kind="file" language="Markdown">
+    <compoundname>detailed-usage.md</compoundname>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline><highlight class="normal">#<sp/>Penify<sp/>CLI<sp/>-<sp/>Detailed<sp/>Usage<sp/>Guide</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">This<sp/>document<sp/>provides<sp/>in-depth<sp/>information<sp/>about<sp/>all<sp/>features<sp/>and<sp/>capabilities<sp/>of<sp/>the<sp/>Penify<sp/>CLI<sp/>tool.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Table<sp/>of<sp/>Contents</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>[Penify<sp/>CLI<sp/>-<sp/>Detailed<sp/>Usage<sp/>Guide](#penify-cli---detailed-usage-guide)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>-<sp/>[Table<sp/>of<sp/>Contents](#table-of-contents)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>-<sp/>[Authentication](#authentication)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>-<sp/>[Login<sp/>Process](#login-process)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>-<sp/>[API<sp/>Token<sp/>Storage](#api-token-storage)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>-<sp/>[Token<sp/>Precedence](#token-precedence)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>-<sp/>[Command<sp/>Overview](#command-overview)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>-<sp/>[Commit<sp/>Message<sp/>Generation](#commit-message-generation)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>-<sp/>[Code<sp/>Documentation<sp/>Generation](#code-documentation-generation)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>-<sp/>[Use<sp/>Cases](#use-cases)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>-<sp/>[Authentication<sp/>Requirement](#authentication-requirement)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>-<sp/>[Configuration<sp/>Settings](#configuration-settings)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>-<sp/>[Git<sp/>Hooks](#git-hooks)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>-<sp/>[Post-Commit<sp/>Hook](#post-commit-hook)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>-<sp/>[Custom<sp/>Hook<sp/>Location](#custom-hook-location)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>-<sp/>[Advanced<sp/>Use<sp/>Cases](#advanced-use-cases)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>-<sp/>[CI/CD<sp/>Integration](#cicd-integration)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>-<sp/>[Remote<sp/>Repository<sp/>Documentation](#remote-repository-documentation)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>-<sp/>[Troubleshooting](#troubleshooting)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>-<sp/>[Common<sp/>Issues](#common-issues)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>-<sp/>[Logs](#logs)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>-<sp/>[Support](#support)</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Authentication</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Login<sp/>Process</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">When<sp/>you<sp/>run<sp/>`penify<sp/>login`,<sp/>the<sp/>tool:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">1.<sp/>Opens<sp/>your<sp/>default<sp/>web<sp/>browser</highlight></codeline>
+<codeline><highlight class="normal">2.<sp/>Redirects<sp/>you<sp/>to<sp/>Penify&apos;s<sp/>login<sp/>page</highlight></codeline>
+<codeline><highlight class="normal">3.<sp/>Captures<sp/>the<sp/>authentication<sp/>token<sp/>after<sp/>successful<sp/>login</highlight></codeline>
+<codeline><highlight class="normal">4.<sp/>Saves<sp/>the<sp/>token<sp/>in<sp/>`~/.penify`<sp/>file</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>API<sp/>Token<sp/>Storage</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">API<sp/>tokens<sp/>are<sp/>stored<sp/>in<sp/>your<sp/>home<sp/>directory<sp/>in<sp/>the<sp/>`.penify`<sp/>file.<sp/>This<sp/>JSON<sp/>file<sp/>contains:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```json</highlight></codeline>
+<codeline><highlight class="normal">{</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>&quot;api_keys&quot;:<sp/>&quot;your-api-token&quot;,</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>&quot;llm&quot;:<sp/>{<sp/>&quot;model&quot;:<sp/>&quot;...&quot;,<sp/>&quot;api_base&quot;:<sp/>&quot;...&quot;,<sp/>&quot;api_key&quot;:<sp/>&quot;...&quot;<sp/>},</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>&quot;jira&quot;:<sp/>{<sp/>&quot;url&quot;:<sp/>&quot;...&quot;,<sp/>&quot;username&quot;:<sp/>&quot;...&quot;,<sp/>&quot;api_token&quot;:<sp/>&quot;...&quot;<sp/>}</highlight></codeline>
+<codeline><highlight class="normal">}</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Token<sp/>Precedence</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">1.<sp/>Environment<sp/>variable<sp/>`PENIFY_API_TOKEN`<sp/>(highest<sp/>priority)</highlight></codeline>
+<codeline><highlight class="normal">2.<sp/>Token<sp/>in<sp/>`~/.penify`<sp/>file</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Command<sp/>Overview</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline><highlight class="normal">penify</highlight></codeline>
+<codeline><highlight class="normal">├──<sp/>commit<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Generate<sp/>smart<sp/>commit<sp/>messages</highlight></codeline>
+<codeline><highlight class="normal">├──<sp/>config<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Configure<sp/>local<sp/>LLM<sp/>and<sp/>JIRA</highlight></codeline>
+<codeline><highlight class="normal">│<sp/><sp/><sp/>├──<sp/>llm<sp/><sp/><sp/><sp/><sp/><sp/><sp/>Configure<sp/>local<sp/>LLM<sp/>settings</highlight></codeline>
+<codeline><highlight class="normal">│<sp/><sp/><sp/>└──<sp/>jira<sp/><sp/><sp/><sp/><sp/><sp/>Configure<sp/>JIRA<sp/>integration</highlight></codeline>
+<codeline><highlight class="normal">├──<sp/>login<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Log<sp/>in<sp/>to<sp/>Penify<sp/>account</highlight></codeline>
+<codeline><highlight class="normal">└──<sp/>docgen<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Generate<sp/>code<sp/>documentation</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>├──<sp/>install-hook<sp/><sp/><sp/><sp/><sp/>Install<sp/>Git<sp/>post-commit<sp/>hook</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>└──<sp/>uninstall-hook<sp/><sp/><sp/>Remove<sp/>Git<sp/>post-commit<sp/>hook</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Commit<sp/>Message<sp/>Generation</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">The<sp/>`commit`<sp/>command<sp/>analyzes<sp/>your<sp/>staged<sp/>changes<sp/>and<sp/>generates<sp/>meaningful<sp/>commit<sp/>messages.<sp/>It<sp/>can:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>Use<sp/>a<sp/>local<sp/>LLM<sp/>if<sp/>configured</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Enhance<sp/>messages<sp/>with<sp/>JIRA<sp/>issue<sp/>details</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Provide<sp/>both<sp/>title<sp/>and<sp/>description</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">For<sp/>specific<sp/>options<sp/>and<sp/>examples,<sp/>see<sp/>[docs/commit-commands.md](commit-commands.md).</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Code<sp/>Documentation<sp/>Generation</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">The<sp/>`docgen`<sp/>command<sp/>generates<sp/>documentation<sp/>for<sp/>your<sp/>code:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Use<sp/>Cases</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">1.<sp/>**Current<sp/>Git<sp/>Diff**:<sp/>Default<sp/>behavior,<sp/>documents<sp/>only<sp/>changed<sp/>files</highlight></codeline>
+<codeline><highlight class="normal">2.<sp/>**Specific<sp/>File**:<sp/>Pass<sp/>a<sp/>file<sp/>path<sp/>with<sp/>`-l<sp/>path/to/file.py`</highlight></codeline>
+<codeline><highlight class="normal">3.<sp/>**Entire<sp/>Folder**:<sp/>Pass<sp/>a<sp/>folder<sp/>path<sp/>with<sp/>`-l<sp/>path/to/folder`</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Authentication<sp/>Requirement</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">This<sp/>feature<sp/>requires<sp/>authentication<sp/>with<sp/>a<sp/>Penify<sp/>account.<sp/>Run<sp/>`penify<sp/>login`<sp/>before<sp/>using<sp/>documentation<sp/>features.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Configuration<sp/>Settings</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Configure<sp/>local<sp/>settings<sp/>using<sp/>the<sp/>`config`<sp/>command:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>**LLM<sp/>Settings**:<sp/>Configure<sp/>a<sp/>local<sp/>LLM<sp/>for<sp/>commit<sp/>message<sp/>generation</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>**JIRA<sp/>Settings**:<sp/>Set<sp/>up<sp/>JIRA<sp/>integration<sp/>for<sp/>enhanced<sp/>commit<sp/>messages</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">For<sp/>detailed<sp/>configuration<sp/>options,<sp/>see<sp/>[docs/config-commands.md](config-commands.md).</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Git<sp/>Hooks</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Penify<sp/>can<sp/>install<sp/>Git<sp/>hooks<sp/>to<sp/>automate<sp/>documentation<sp/>generation:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Post-Commit<sp/>Hook</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>**Install**:<sp/>`penify<sp/>docgen<sp/>install-hook`</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>**What<sp/>it<sp/>does**:<sp/>Automatically<sp/>generates<sp/>documentation<sp/>for<sp/>changed<sp/>files<sp/>after<sp/>each<sp/>commit</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>**Uninstall**:<sp/>`penify<sp/>docgen<sp/>uninstall-hook`</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Custom<sp/>Hook<sp/>Location</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">You<sp/>can<sp/>specify<sp/>a<sp/>custom<sp/>location<sp/>for<sp/>Git<sp/>hooks:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>install-hook<sp/>-l<sp/>/path/to/git/repo</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Advanced<sp/>Use<sp/>Cases</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>CI/CD<sp/>Integration</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">For<sp/>CI/CD<sp/>pipelines:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">1.<sp/>Set<sp/>`PENIFY_API_TOKEN`<sp/>as<sp/>an<sp/>environment<sp/>variable</highlight></codeline>
+<codeline><highlight class="normal">2.<sp/>Run<sp/>commands<sp/>without<sp/>requiring<sp/>interactive<sp/>login</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Remote<sp/>Repository<sp/>Documentation</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Generate<sp/>documentation<sp/>for<sp/>an<sp/>entire<sp/>repository:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">git<sp/>clone<sp/>https://github.com/user/repo</highlight></codeline>
+<codeline><highlight class="normal">cd<sp/>repo</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>.</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Troubleshooting</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Common<sp/>Issues</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">1.<sp/>**API<sp/>Key<sp/>Errors**:<sp/>Ensure<sp/>you&apos;ve<sp/>run<sp/>`penify<sp/>login`<sp/>or<sp/>set<sp/>`PENIFY_API_TOKEN`</highlight></codeline>
+<codeline><highlight class="normal">2.<sp/>**LLM<sp/>Configuration**:<sp/>Check<sp/>your<sp/>LLM<sp/>settings<sp/>with<sp/>`cat<sp/>~/.penify`</highlight></codeline>
+<codeline><highlight class="normal">3.<sp/>**JIRA<sp/>Integration**:<sp/>Verify<sp/>JIRA<sp/>credentials<sp/>in<sp/>your<sp/>configuration</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Logs</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">For<sp/>more<sp/>detailed<sp/>logs,<sp/>you<sp/>can<sp/>set<sp/>the<sp/>environment<sp/>variable:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">export<sp/>PENIFY_DEBUG=1</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Support</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">For<sp/>additional<sp/>help,<sp/>visit<sp/>[https://docs.penify.dev/](https://docs.penify.dev/)<sp/>or<sp/>contact<sp/>support@penify.dev</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/detailed-usage.md"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/dir_063e2d5fe58a131099a7fe4200cca78c.xml b/docs345/xml/dir_063e2d5fe58a131099a7fe4200cca78c.xml
new file mode 100644
index 0000000..64ba2d0
--- /dev/null
+++ b/docs345/xml/dir_063e2d5fe58a131099a7fe4200cca78c.xml
@@ -0,0 +1,17 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="dir_063e2d5fe58a131099a7fe4200cca78c" kind="dir">
+    <compoundname>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests</compoundname>
+    <innerfile refid="tests_2____init_____8py">__init__.py</innerfile>
+    <innerfile refid="conftest_8py">conftest.py</innerfile>
+    <innerfile refid="test__commit__commands_8py">test_commit_commands.py</innerfile>
+    <innerfile refid="test__config__commands_8py">test_config_commands.py</innerfile>
+    <innerfile refid="test__doc__commands_8py">test_doc_commands.py</innerfile>
+    <innerfile refid="test__web__config_8py">test_web_config.py</innerfile>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/dir_1648a057408aae8db85b8e3797335623.xml b/docs345/xml/dir_1648a057408aae8db85b8e3797335623.xml
new file mode 100644
index 0000000..300e1cd
--- /dev/null
+++ b/docs345/xml/dir_1648a057408aae8db85b8e3797335623.xml
@@ -0,0 +1,11 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="dir_1648a057408aae8db85b8e3797335623" kind="dir">
+    <compoundname>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs</compoundname>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/dir_624fa2a8bce97f0444ac5cca335d4e23.xml b/docs345/xml/dir_624fa2a8bce97f0444ac5cca335d4e23.xml
new file mode 100644
index 0000000..52eaaa8
--- /dev/null
+++ b/docs345/xml/dir_624fa2a8bce97f0444ac5cca335d4e23.xml
@@ -0,0 +1,17 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="dir_624fa2a8bce97f0444ac5cca335d4e23" kind="dir">
+    <compoundname>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands</compoundname>
+    <innerfile refid="penify__hook_2commands_2____init_____8py">__init__.py</innerfile>
+    <innerfile refid="auth__commands_8py">auth_commands.py</innerfile>
+    <innerfile refid="commit__commands_8py">commit_commands.py</innerfile>
+    <innerfile refid="config__commands_8py">config_commands.py</innerfile>
+    <innerfile refid="doc__commands_8py">doc_commands.py</innerfile>
+    <innerfile refid="hook__commands_8py">hook_commands.py</innerfile>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/dir_b3b22d2ab7966b65f6b237e3231b41be.xml b/docs345/xml/dir_b3b22d2ab7966b65f6b237e3231b41be.xml
new file mode 100644
index 0000000..2a7c175
--- /dev/null
+++ b/docs345/xml/dir_b3b22d2ab7966b65f6b237e3231b41be.xml
@@ -0,0 +1,15 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="dir_b3b22d2ab7966b65f6b237e3231b41be" kind="dir">
+    <compoundname>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli</compoundname>
+    <innerdir refid="dir_1648a057408aae8db85b8e3797335623">/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs</innerdir>
+    <innerdir refid="dir_f88c3381c1861b3f7ca1f3d63cf244b5">/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook</innerdir>
+    <innerdir refid="dir_063e2d5fe58a131099a7fe4200cca78c">/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests</innerdir>
+    <innerfile refid="setup_8py">setup.py</innerfile>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/dir_f88c3381c1861b3f7ca1f3d63cf244b5.xml b/docs345/xml/dir_f88c3381c1861b3f7ca1f3d63cf244b5.xml
new file mode 100644
index 0000000..9f4f478
--- /dev/null
+++ b/docs345/xml/dir_f88c3381c1861b3f7ca1f3d63cf244b5.xml
@@ -0,0 +1,27 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="dir_f88c3381c1861b3f7ca1f3d63cf244b5" kind="dir">
+    <compoundname>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook</compoundname>
+    <innerdir refid="dir_624fa2a8bce97f0444ac5cca335d4e23">/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands</innerdir>
+    <innerfile refid="penify__hook_2____init_____8py">__init__.py</innerfile>
+    <innerfile refid="api__client_8py">api_client.py</innerfile>
+    <innerfile refid="base__analyzer_8py">base_analyzer.py</innerfile>
+    <innerfile refid="commit__analyzer_8py">commit_analyzer.py</innerfile>
+    <innerfile refid="config__command_8py">config_command.py</innerfile>
+    <innerfile refid="constants_8py">constants.py</innerfile>
+    <innerfile refid="file__analyzer_8py">file_analyzer.py</innerfile>
+    <innerfile refid="folder__analyzer_8py">folder_analyzer.py</innerfile>
+    <innerfile refid="git__analyzer_8py">git_analyzer.py</innerfile>
+    <innerfile refid="jira__client_8py">jira_client.py</innerfile>
+    <innerfile refid="llm__client_8py">llm_client.py</innerfile>
+    <innerfile refid="login__command_8py">login_command.py</innerfile>
+    <innerfile refid="main_8py">main.py</innerfile>
+    <innerfile refid="ui__utils_8py">ui_utils.py</innerfile>
+    <innerfile refid="utils_8py">utils.py</innerfile>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/doc__commands_8md.xml b/docs345/xml/doc__commands_8md.xml
new file mode 100644
index 0000000..839cd71
--- /dev/null
+++ b/docs345/xml/doc__commands_8md.xml
@@ -0,0 +1,340 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="doc__commands_8md" kind="file" language="Markdown">
+    <compoundname>doc_commands.md</compoundname>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline><highlight class="normal">#<sp/>Penify<sp/>CLI<sp/>-<sp/>Documentation<sp/>Generation<sp/>Commands</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">This<sp/>document<sp/>provides<sp/>a<sp/>detailed<sp/>guide<sp/>to<sp/>all<sp/>permutations<sp/>and<sp/>combinations<sp/>of<sp/>the<sp/>`docgen`<sp/>command,<sp/>including<sp/>extensive<sp/>information<sp/>about<sp/>Git<sp/>hook<sp/>commands<sp/>for<sp/>automating<sp/>documentation<sp/>generation.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Table<sp/>of<sp/>Contents</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>[Basic<sp/>Usage](#basic-usage)</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>[Command<sp/>Options](#command-options)</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>[Option<sp/>Combinations](#option-combinations)</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>[Git<sp/>Hook<sp/>Commands](#git-hook-commands)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>-<sp/>[Hook<sp/>Installation](#hook-installation)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>-<sp/>[Hook<sp/>Customization](#hook-customization)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>-<sp/>[Hook<sp/>Uninstallation](#hook-uninstallation)</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>[Advanced<sp/>Use<sp/>Cases](#advanced-use-cases)</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>[Troubleshooting](#troubleshooting)</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Basic<sp/>Usage</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">By<sp/>default,<sp/>this<sp/>command:</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Analyzes<sp/>the<sp/>current<sp/>Git<sp/>diff<sp/>(changes<sp/>since<sp/>last<sp/>commit)</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Generates<sp/>documentation<sp/>for<sp/>changed<sp/>files<sp/>only</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Requires<sp/>authentication<sp/>via<sp/>`penify<sp/>login`</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Command<sp/>Options</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>`-l,<sp/>--location`</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Specify<sp/>a<sp/>target<sp/>for<sp/>documentation<sp/>generation:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Generate<sp/>documentation<sp/>for<sp/>a<sp/>specific<sp/>file</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>path/to/file.py</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Generate<sp/>documentation<sp/>for<sp/>a<sp/>specific<sp/>folder</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>path/to/folder</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Without<sp/>this<sp/>flag,<sp/>Penify<sp/>analyzes<sp/>only<sp/>Git-tracked<sp/>modified<sp/>files.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Subcommands</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>`install-hook`</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Install<sp/>a<sp/>Git<sp/>post-commit<sp/>hook<sp/>to<sp/>automatically<sp/>generate<sp/>documentation:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>install-hook</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>`uninstall-hook`</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Remove<sp/>the<sp/>Git<sp/>post-commit<sp/>hook:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>uninstall-hook</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Option<sp/>Combinations</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Generate<sp/>Documentation<sp/>for<sp/>Current<sp/>Git<sp/>Diff</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Basic<sp/>usage<sp/>-<sp/>current<sp/>Git<sp/>diff</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Generate<sp/>Documentation<sp/>for<sp/>a<sp/>Specific<sp/>File</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Single<sp/>file<sp/>documentation</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>src/main.py</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Generate<sp/>Documentation<sp/>for<sp/>a<sp/>Folder</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Folder<sp/>documentation</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>src/models/</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Install<sp/>Hook<sp/>in<sp/>Current<sp/>Repository</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Install<sp/>hook<sp/>in<sp/>current<sp/>Git<sp/>repository</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>install-hook</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Install<sp/>Hook<sp/>in<sp/>Specific<sp/>Repository</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Install<sp/>hook<sp/>in<sp/>a<sp/>specific<sp/>Git<sp/>repository</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>install-hook<sp/>-l<sp/>/path/to/repo</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Uninstall<sp/>Hook<sp/>from<sp/>Current<sp/>Repository</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Uninstall<sp/>hook<sp/>from<sp/>current<sp/>Git<sp/>repository</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>uninstall-hook</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Uninstall<sp/>Hook<sp/>from<sp/>Specific<sp/>Repository</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Uninstall<sp/>hook<sp/>from<sp/>a<sp/>specific<sp/>Git<sp/>repository</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>uninstall-hook<sp/>-l<sp/>/path/to/repo</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Git<sp/>Hook<sp/>Commands</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Penify<sp/>provides<sp/>Git<sp/>hook<sp/>commands<sp/>to<sp/>automate<sp/>documentation<sp/>generation<sp/>as<sp/>part<sp/>of<sp/>your<sp/>Git<sp/>workflow.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Hook<sp/>Installation</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>How<sp/>Hooks<sp/>Work</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">When<sp/>you<sp/>install<sp/>a<sp/>Git<sp/>hook<sp/>with<sp/>`penify<sp/>docgen<sp/>install-hook`,<sp/>Penify:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">1.<sp/>Creates<sp/>a<sp/>post-commit<sp/>hook<sp/>script<sp/>in<sp/>the<sp/>`.git/hooks`<sp/>directory</highlight></codeline>
+<codeline><highlight class="normal">2.<sp/>Makes<sp/>the<sp/>script<sp/>executable</highlight></codeline>
+<codeline><highlight class="normal">3.<sp/>Configures<sp/>the<sp/>hook<sp/>to<sp/>run<sp/>`penify<sp/>docgen`<sp/>after<sp/>each<sp/>commit</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Hook<sp/>Script<sp/>Content</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">The<sp/>generated<sp/>post-commit<sp/>hook<sp/>contains:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#!/bin/sh</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>This<sp/>is<sp/>a<sp/>post-commit<sp/>hook<sp/>generated<sp/>by<sp/>penify.</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Automatically<sp/>generates<sp/>documentation<sp/>for<sp/>changed<sp/>files<sp/>after<sp/>each<sp/>commit.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-gf<sp/>/path/to/git/repository<sp/>-t<sp/>your_api_token</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Installation<sp/>Location</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">By<sp/>default,<sp/>hooks<sp/>are<sp/>installed<sp/>in<sp/>the<sp/>current<sp/>Git<sp/>repository.<sp/>You<sp/>can<sp/>specify<sp/>a<sp/>different<sp/>location:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>install-hook<sp/>-l<sp/>/path/to/repo</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Installation<sp/>Requirements</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">To<sp/>install<sp/>hooks,<sp/>you<sp/>need:</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>A<sp/>valid<sp/>Penify<sp/>API<sp/>token<sp/>(login<sp/>first<sp/>with<sp/>`penify<sp/>login`)</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Write<sp/>permissions<sp/>to<sp/>the<sp/>`.git/hooks`<sp/>directory</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Verifying<sp/>Installation</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">After<sp/>installation,<sp/>you<sp/>can<sp/>verify<sp/>that<sp/>the<sp/>hook<sp/>is<sp/>installed:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">cat<sp/>.git/hooks/post-commit</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Hook<sp/>Customization</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">You<sp/>can<sp/>customize<sp/>the<sp/>post-commit<sp/>hook<sp/>after<sp/>installation:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Modifying<sp/>Hook<sp/>Behavior</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">1.<sp/>Edit<sp/>the<sp/>`.git/hooks/post-commit`<sp/>file</highlight></codeline>
+<codeline><highlight class="normal">2.<sp/>Add<sp/>additional<sp/>options<sp/>to<sp/>the<sp/>`penify<sp/>docgen`<sp/>command</highlight></codeline>
+<codeline><highlight class="normal">3.<sp/>Add<sp/>other<sp/>commands<sp/>to<sp/>run<sp/>after<sp/>commit</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Example<sp/>of<sp/>a<sp/>customized<sp/>hook:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#!/bin/sh</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>This<sp/>is<sp/>a<sp/>post-commit<sp/>hook<sp/>generated<sp/>by<sp/>penify.</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Automatically<sp/>generates<sp/>documentation<sp/>for<sp/>changed<sp/>files<sp/>after<sp/>each<sp/>commit.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Generate<sp/>documentation</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-gf<sp/>/path/to/git/repository<sp/>-t<sp/>your_api_token</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Additional<sp/>custom<sp/>commands</highlight></codeline>
+<codeline><highlight class="normal">echo<sp/>&quot;Documentation<sp/>generation<sp/>complete!&quot;</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Advanced<sp/>Hook<sp/>Scenarios</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">**Conditional<sp/>Documentation<sp/>Generation**:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#!/bin/sh</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Only<sp/>generate<sp/>documentation<sp/>for<sp/>commits<sp/>to<sp/>the<sp/>main<sp/>branch</highlight></codeline>
+<codeline><highlight class="normal">BRANCH=$(git<sp/>rev-parse<sp/>--abbrev-ref<sp/>HEAD)</highlight></codeline>
+<codeline><highlight class="normal">if<sp/>[<sp/>&quot;$BRANCH&quot;<sp/>=<sp/>&quot;main&quot;<sp/>];<sp/>then</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>penify<sp/>docgen<sp/>-gf<sp/>/path/to/git/repository<sp/>-t<sp/>your_api_token</highlight></codeline>
+<codeline><highlight class="normal">fi</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">**Documenting<sp/>Specific<sp/>Files/Folders**:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#!/bin/sh</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Only<sp/>document<sp/>Python<sp/>files<sp/>in<sp/>the<sp/>src<sp/>directory</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>src/<sp/>-gf<sp/>/path/to/git/repository<sp/>-t<sp/>your_api_token</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Hook<sp/>Uninstallation</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Standard<sp/>Uninstallation</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">To<sp/>remove<sp/>a<sp/>hook<sp/>from<sp/>the<sp/>current<sp/>repository:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>uninstall-hook</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Specific<sp/>Repository<sp/>Uninstallation</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">To<sp/>remove<sp/>a<sp/>hook<sp/>from<sp/>a<sp/>specific<sp/>repository:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>uninstall-hook<sp/>-l<sp/>/path/to/repo</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Manual<sp/>Hook<sp/>Removal</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">If<sp/>needed,<sp/>you<sp/>can<sp/>manually<sp/>remove<sp/>the<sp/>hook:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">rm<sp/>.git/hooks/post-commit</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Verifying<sp/>Uninstallation</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Check<sp/>that<sp/>the<sp/>hook<sp/>was<sp/>successfully<sp/>removed:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">ls<sp/>-la<sp/>.git/hooks/post-commit<sp/><sp/>#<sp/>Should<sp/>return<sp/>&quot;No<sp/>such<sp/>file<sp/>or<sp/>directory&quot;</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Advanced<sp/>Use<sp/>Cases</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Continuous<sp/>Integration</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Run<sp/>documentation<sp/>generation<sp/>in<sp/>CI<sp/>pipelines:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>In<sp/>your<sp/>CI<sp/>script</highlight></codeline>
+<codeline><highlight class="normal">export<sp/>PENIFY_API_TOKEN=your_api_token</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>src/</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Batch<sp/>Documentation</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Generate<sp/>documentation<sp/>for<sp/>multiple<sp/>repositories:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Bash<sp/>script<sp/>for<sp/>batch<sp/>documentation</highlight></codeline>
+<codeline><highlight class="normal">for<sp/>repo<sp/>in<sp/>repo1<sp/>repo2<sp/>repo3;<sp/>do</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>cd<sp/>/path/to/$repo</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>penify<sp/>docgen<sp/>-l<sp/>.</highlight></codeline>
+<codeline><highlight class="normal">done</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Custom<sp/>Git<sp/>Hook<sp/>Integration</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Integrate<sp/>with<sp/>other<sp/>Git<sp/>hooks:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>In<sp/>.git/hooks/pre-push</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>src/</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Documenting<sp/>Release<sp/>Tags</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Generate<sp/>documentation<sp/>when<sp/>creating<sp/>a<sp/>release<sp/>tag:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Document<sp/>everything<sp/>when<sp/>creating<sp/>a<sp/>tag</highlight></codeline>
+<codeline><highlight class="normal">git<sp/>tag<sp/>-a<sp/>v1.0.0</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>.<sp/><sp/>#<sp/>Document<sp/>entire<sp/>codebase</highlight></codeline>
+<codeline><highlight class="normal">git<sp/>commit<sp/>--amend<sp/>-m<sp/>&quot;Release<sp/>v1.0.0<sp/>with<sp/>updated<sp/>documentation&quot;</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Troubleshooting</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Common<sp/>Issues</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">1.<sp/>**&quot;Authentication<sp/>required&quot;**</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Run<sp/>`penify<sp/>login`<sp/>before<sp/>using<sp/>documentation<sp/>features</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Check<sp/>your<sp/>API<sp/>token<sp/>with<sp/>`cat<sp/>~/.penify`</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">2.<sp/>**&quot;Permission<sp/>denied<sp/>when<sp/>installing<sp/>hook&quot;**</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Check<sp/>Git<sp/>repository<sp/>permissions</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Try<sp/>running<sp/>with<sp/>sudo<sp/>(if<sp/>appropriate<sp/>for<sp/>your<sp/>environment)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Ensure<sp/>the<sp/>`.git/hooks`<sp/>directory<sp/>exists</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">3.<sp/>**&quot;Hook<sp/>installed<sp/>but<sp/>not<sp/>running&quot;**</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Check<sp/>if<sp/>the<sp/>hook<sp/>is<sp/>executable:<sp/>`ls<sp/>-la<sp/>.git/hooks/post-commit`</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Make<sp/>it<sp/>executable<sp/>if<sp/>needed:<sp/>`chmod<sp/>+x<sp/>.git/hooks/post-commit`</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Check<sp/>for<sp/>syntax<sp/>errors<sp/>in<sp/>the<sp/>hook<sp/>script</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">4.<sp/>**&quot;File<sp/>or<sp/>directory<sp/>not<sp/>found&quot;**</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Verify<sp/>the<sp/>path<sp/>provided<sp/>to<sp/>the<sp/>`-l`<sp/>option</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Ensure<sp/>you&apos;re<sp/>running<sp/>the<sp/>command<sp/>from<sp/>the<sp/>correct<sp/>directory</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">5.<sp/>**&quot;Hook<sp/>uninstallation<sp/>failed&quot;**</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Check<sp/>permissions<sp/>on<sp/>the<sp/>`.git/hooks`<sp/>directory</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Try<sp/>manual<sp/>removal:<sp/>`rm<sp/>.git/hooks/post-commit`</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Debugging</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">For<sp/>detailed<sp/>output<sp/>when<sp/>running<sp/>documentation<sp/>commands:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">export<sp/>PENIFY_DEBUG=1</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>src/</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Getting<sp/>Help</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">For<sp/>command-specific<sp/>help:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>--help</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>install-hook<sp/>--help</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>uninstall-hook<sp/>--help</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/doc_commands.md"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/doc__commands_8py.xml b/docs345/xml/doc__commands_8py.xml
new file mode 100644
index 0000000..86be493
--- /dev/null
+++ b/docs345/xml/doc__commands_8py.xml
@@ -0,0 +1,173 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="doc__commands_8py" kind="file" language="Python">
+    <compoundname>doc_commands.py</compoundname>
+    <innernamespace refid="namespacepenify__hook">penify_hook</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1commands">penify_hook::commands</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1commands_1_1doc__commands">penify_hook::commands::doc_commands</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacepenify__hook_1_1commands_1_1doc__commands" refkind="compound"><highlight class="normal"></highlight></codeline>
+<codeline lineno="2"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>argparse</highlight></codeline>
+<codeline lineno="3"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>logging</highlight></codeline>
+<codeline lineno="4"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>os</highlight></codeline>
+<codeline lineno="5"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>sys</highlight></codeline>
+<codeline lineno="6"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>time</highlight></codeline>
+<codeline lineno="7"><highlight class="normal"></highlight></codeline>
+<codeline lineno="8" refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a4daac68bc563432bf25c85dc78081a25" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a4daac68bc563432bf25c85dc78081a25" kindref="member">generate_doc</ref>(api_url,<sp/>token,<sp/>location=None):</highlight></codeline>
+<codeline lineno="9"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Generates<sp/>documentation<sp/>based<sp/>on<sp/>the<sp/>given<sp/>parameters.</highlight></codeline>
+<codeline lineno="10"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="11"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>initializes<sp/>an<sp/>API<sp/>client<sp/>using<sp/>the<sp/>provided<sp/>API<sp/>URL<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="12"><highlight class="normal"><sp/><sp/><sp/><sp/>token.<sp/>It<sp/>then<sp/>generates<sp/>documentation<sp/>by<sp/>analyzing<sp/>the<sp/>specified</highlight></codeline>
+<codeline lineno="13"><highlight class="normal"><sp/><sp/><sp/><sp/>location,<sp/>which<sp/>can<sp/>be<sp/>a<sp/>folder,<sp/>a<sp/>file,<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/>the<sp/>current<sp/>working</highlight></codeline>
+<codeline lineno="14"><highlight class="normal"><sp/><sp/><sp/><sp/>directory<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>no<sp/>location<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>provided.<sp/>The<sp/>function<sp/>handles<sp/>different</highlight></codeline>
+<codeline lineno="15"><highlight class="normal"><sp/><sp/><sp/><sp/>types<sp/>of<sp/>analysis<sp/>based<sp/>on<sp/>the<sp/>input<sp/>location<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>reports<sp/>any<sp/>errors</highlight></codeline>
+<codeline lineno="16"><highlight class="normal"><sp/><sp/><sp/><sp/>encountered<sp/>during<sp/>the<sp/>process.</highlight></codeline>
+<codeline lineno="17"><highlight class="normal"></highlight></codeline>
+<codeline lineno="18"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="19"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_url<sp/>(str):<sp/>The<sp/>URL<sp/>of<sp/>the<sp/>API<sp/>to<sp/>connect<sp/>to<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>documentation<sp/>generation.</highlight></codeline>
+<codeline lineno="20"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>token<sp/>(str):<sp/>The<sp/>authentication<sp/>token<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>accessing<sp/>the<sp/>API.</highlight></codeline>
+<codeline lineno="21"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>location<sp/>(str?):<sp/>The<sp/>path<sp/>to<sp/>a<sp/>specific<sp/>file<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/>folder<sp/>to<sp/>analyze.<sp/>If<sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>provided,<sp/>the</highlight></codeline>
+<codeline lineno="22"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>current<sp/>working<sp/>directory<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>used.</highlight></codeline>
+<codeline lineno="23"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="24"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>t1<sp/>=<sp/>time.time()</highlight></codeline>
+<codeline lineno="25"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>..api_client<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>APIClient</highlight></codeline>
+<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Time<sp/>taken<sp/>to<sp/>laod<sp/>APIClinet:<sp/>{time.time()<sp/>-<sp/>t1:.2f}<sp/>seconds&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="27"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Generates<sp/>documentation<sp/>based<sp/>on<sp/>the<sp/>given<sp/>parameters.</highlight></codeline>
+<codeline lineno="28"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="29"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>initializes<sp/>an<sp/>API<sp/>client<sp/>using<sp/>the<sp/>provided<sp/>API<sp/>URL<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/>token.<sp/>It<sp/>then<sp/>generates<sp/>documentation<sp/>by<sp/>analyzing<sp/>the<sp/>specified</highlight></codeline>
+<codeline lineno="31"><highlight class="normal"><sp/><sp/><sp/><sp/>location,<sp/>which<sp/>can<sp/>be<sp/>a<sp/>folder,<sp/>a<sp/>file,<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/>the<sp/>current<sp/>working</highlight></codeline>
+<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/>directory<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>no<sp/>location<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>provided.<sp/>The<sp/>function<sp/>handles<sp/>different</highlight></codeline>
+<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/>types<sp/>of<sp/>analysis<sp/>based<sp/>on<sp/>the<sp/>input<sp/>location<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>reports<sp/>any<sp/>errors</highlight></codeline>
+<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/>encountered<sp/>during<sp/>the<sp/>process.</highlight></codeline>
+<codeline lineno="35"><highlight class="normal"></highlight></codeline>
+<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_url<sp/>(str):<sp/>The<sp/>URL<sp/>of<sp/>the<sp/>API<sp/>to<sp/>connect<sp/>to<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>documentation<sp/>generation.</highlight></codeline>
+<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>token<sp/>(str):<sp/>The<sp/>authentication<sp/>token<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>accessing<sp/>the<sp/>API.</highlight></codeline>
+<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>location<sp/>(str?):<sp/>The<sp/>path<sp/>to<sp/>a<sp/>specific<sp/>file<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/>folder<sp/>to<sp/>analyze.</highlight></codeline>
+<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>If<sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>provided,<sp/>the<sp/>current<sp/>working<sp/>directory<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>used.</highlight></codeline>
+<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="42"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>api_client<sp/>=<sp/>APIClient(api_url,<sp/>token)</highlight></codeline>
+<codeline lineno="43"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>location<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>current_folder_path<sp/>=<sp/>os.getcwd()</highlight></codeline>
+<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>..git_analyzer<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>GitDocGenHook</highlight></codeline>
+<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>analyzer<sp/>=<sp/>GitDocGenHook(current_folder_path,<sp/>api_client)</highlight></codeline>
+<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>analyzer.run()</highlight></codeline>
+<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Error:<sp/>{e}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>sys.exit(1)</highlight></codeline>
+<codeline lineno="52"><highlight class="normal"></highlight></codeline>
+<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>if<sp/>location<sp/>is<sp/>a<sp/>file</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">elif</highlight><highlight class="normal"><sp/>len(location.split(</highlight><highlight class="stringliteral">&apos;.&apos;</highlight><highlight class="normal">))<sp/>&gt;<sp/>1:</highlight></codeline>
+<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>..file_analyzer<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>FileAnalyzerGenHook</highlight></codeline>
+<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>analyzer<sp/>=<sp/>FileAnalyzerGenHook(location,<sp/>api_client)</highlight></codeline>
+<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>analyzer.run()</highlight></codeline>
+<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Error:<sp/>{e}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>sys.exit(1)</highlight></codeline>
+<codeline lineno="62"><highlight class="normal"></highlight></codeline>
+<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>..folder_analyzer<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>FolderAnalyzerGenHook</highlight></codeline>
+<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>analyzer<sp/>=<sp/>FolderAnalyzerGenHook(location,<sp/>api_client)</highlight></codeline>
+<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>analyzer.run()</highlight></codeline>
+<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Error:<sp/>{e}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>sys.exit(1)</highlight></codeline>
+<codeline lineno="71"><highlight class="normal"></highlight></codeline>
+<codeline lineno="72"><highlight class="normal"></highlight></codeline>
+<codeline lineno="73"><highlight class="normal"></highlight><highlight class="comment">#<sp/>Define<sp/>the<sp/>docgen<sp/>description<sp/>text</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="74" refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a3e42540047da37565afffeaf106cb948" refkind="member"><highlight class="normal">docgen_description<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Generate<sp/>code<sp/>documentation<sp/>using<sp/>Penify.</highlight></codeline>
+<codeline lineno="75"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="76"><highlight class="stringliteral">This<sp/>command<sp/>requires<sp/>you<sp/>to<sp/>be<sp/>logged<sp/>in<sp/>to<sp/>your<sp/>Penify<sp/>account.</highlight></codeline>
+<codeline lineno="77"><highlight class="stringliteral">You<sp/>can<sp/>generate<sp/>documentation<sp/>for:</highlight></codeline>
+<codeline lineno="78"><highlight class="stringliteral">-<sp/>Current<sp/>Git<sp/>diff<sp/>(default)</highlight></codeline>
+<codeline lineno="79"><highlight class="stringliteral">-<sp/>Specific<sp/>file</highlight></codeline>
+<codeline lineno="80"><highlight class="stringliteral">-<sp/>Specific<sp/>folder</highlight></codeline>
+<codeline lineno="81"><highlight class="stringliteral">&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="82"><highlight class="normal"></highlight></codeline>
+<codeline lineno="83" refid="namespacepenify__hook_1_1commands_1_1doc__commands_1acc7f4ead1b11951d885fa5c151c2cbe0" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1commands_1_1doc__commands_1acc7f4ead1b11951d885fa5c151c2cbe0" kindref="member">setup_docgen_parser</ref>(parser):</highlight></codeline>
+<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Set<sp/>up<sp/>and<sp/>configure<sp/>a<sp/>parser<sp/>for<sp/>documentation<sp/>generation<sp/>using<sp/>Git</highlight></codeline>
+<codeline lineno="85"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>commands.</highlight></codeline>
+<codeline lineno="86"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="87"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>configures<sp/>a<sp/>parser<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>various<sp/>subcommands<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>arguments</highlight></codeline>
+<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/>necessary<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>generating<sp/>documentation<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>Git<sp/>diffs,<sp/>files,<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/>folders.</highlight></codeline>
+<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/>It<sp/>also<sp/>installs<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>uninstalls<sp/>commit<sp/>hooks<sp/>to<sp/>automate<sp/>documentation</highlight></codeline>
+<codeline lineno="90"><highlight class="normal"><sp/><sp/><sp/><sp/>generation<sp/>on<sp/>commits.</highlight></codeline>
+<codeline lineno="91"><highlight class="normal"></highlight></codeline>
+<codeline lineno="92"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="93"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>parser<sp/>(argparse.ArgumentParser):<sp/>The<sp/>parser<sp/>to<sp/>configure.</highlight></codeline>
+<codeline lineno="94"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="95"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="96"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>We<sp/>don&apos;t<sp/>need<sp/>to<sp/>create<sp/>a<sp/>new<sp/>docgen_parser<sp/>since<sp/>it&apos;s<sp/>passed<sp/>as<sp/>a<sp/>parameter</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="97"><highlight class="normal"><sp/><sp/><sp/><sp/>docgen_parser_description<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="98"><highlight class="stringliteral">It<sp/>generates<sp/>Documentation<sp/>for<sp/>the<sp/>Git<sp/>diff,<sp/>file<sp/>or<sp/>folder.</highlight></codeline>
+<codeline lineno="99"><highlight class="stringliteral">1.<sp/>By<sp/>default,<sp/>it<sp/>will<sp/>git<sp/>diff<sp/>documentation<sp/>-<sp/>visit<sp/>https://penify.wiki/dcdc<sp/>for<sp/>more<sp/>details.</highlight></codeline>
+<codeline lineno="100"><highlight class="stringliteral">2.<sp/>If<sp/>file<sp/>is<sp/>provided,<sp/>it<sp/>will<sp/>generate<sp/>documentation<sp/>for<sp/>that<sp/>file<sp/>-<sp/>visit<sp/>https://penify.wiki/dfdc</highlight></codeline>
+<codeline lineno="101"><highlight class="stringliteral">3.<sp/>If<sp/>folder<sp/>is<sp/>provided,<sp/>it<sp/>will<sp/>generate<sp/>documentation<sp/>for<sp/>that<sp/>folder<sp/>-<sp/>visit<sp/>https://penify.wiki/drdc</highlight></codeline>
+<codeline lineno="102"><highlight class="stringliteral">4.<sp/>Commit<sp/>Hooks<sp/>will<sp/>automatically<sp/>generate<sp/>documentation<sp/>for<sp/>the<sp/>Git<sp/>diff<sp/>on<sp/>commit<sp/>-<sp/>https://penify.wiki/dpchc</highlight></codeline>
+<codeline lineno="103"><highlight class="stringliteral">5.<sp/>You<sp/>need<sp/>to<sp/>be<sp/>logged<sp/>in<sp/>to<sp/>your<sp/>Penify<sp/>account<sp/>to<sp/>use<sp/>these<sp/>commands.</highlight></codeline>
+<codeline lineno="104"><highlight class="stringliteral">&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="105"><highlight class="normal"></highlight></codeline>
+<codeline lineno="106"><highlight class="normal"><sp/><sp/><sp/><sp/>parser.description<sp/>=<sp/>docgen_parser_description</highlight></codeline>
+<codeline lineno="107"><highlight class="normal"><sp/><sp/><sp/><sp/>parser.formatter_class<sp/>=<sp/>argparse.RawDescriptionHelpFormatter</highlight></codeline>
+<codeline lineno="108"><highlight class="normal"><sp/><sp/><sp/><sp/>docgen_subparsers<sp/>=<sp/>parser.add_subparsers(title=</highlight><highlight class="stringliteral">&quot;docgen_subcommand&quot;</highlight><highlight class="normal">,<sp/>dest=</highlight><highlight class="stringliteral">&quot;docgen_subcommand&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="109"><highlight class="normal"></highlight></codeline>
+<codeline lineno="110"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Docgen<sp/>main<sp/>options<sp/>(for<sp/>direct<sp/>documentation<sp/>generation)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="111"><highlight class="normal"><sp/><sp/><sp/><sp/>parser.add_argument(</highlight><highlight class="stringliteral">&quot;-l&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;--location&quot;</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;[Optional]<sp/>Path<sp/>to<sp/>the<sp/>folder<sp/>or<sp/>file<sp/>to<sp/>Generate<sp/>Documentation.<sp/>By<sp/>default<sp/>it<sp/>will<sp/>pick<sp/>the<sp/>root<sp/>directory.&quot;</highlight><highlight class="normal">,<sp/>default=</highlight><highlight class="keywordtype">None</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="112"><highlight class="normal"></highlight></codeline>
+<codeline lineno="113"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Subcommand:<sp/>install-hook<sp/>(as<sp/>part<sp/>of<sp/>docgen)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="114"><highlight class="normal"><sp/><sp/><sp/><sp/>install_hook_parser<sp/>=<sp/>docgen_subparsers.add_parser(</highlight><highlight class="stringliteral">&quot;install-hook&quot;</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;Install<sp/>the<sp/>Git<sp/>post-commit<sp/>hook.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="115"><highlight class="normal"><sp/><sp/><sp/><sp/>install_hook_parser.add_argument(</highlight><highlight class="stringliteral">&quot;-l&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;--location&quot;</highlight><highlight class="normal">,<sp/>required=</highlight><highlight class="keyword">False</highlight><highlight class="normal">,<sp/></highlight></codeline>
+<codeline lineno="116"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>help=</highlight><highlight class="stringliteral">&quot;Location<sp/>in<sp/>which<sp/>to<sp/>install<sp/>the<sp/>Git<sp/>hook.<sp/>Defaults<sp/>to<sp/>current<sp/>directory.&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="117"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>default=os.getcwd())</highlight></codeline>
+<codeline lineno="118"><highlight class="normal"></highlight></codeline>
+<codeline lineno="119"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Subcommand:<sp/>uninstall-hook<sp/>(as<sp/>part<sp/>of<sp/>docgen)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="120"><highlight class="normal"><sp/><sp/><sp/><sp/>uninstall_hook_parser<sp/>=<sp/>docgen_subparsers.add_parser(</highlight><highlight class="stringliteral">&quot;uninstall-hook&quot;</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;Uninstall<sp/>the<sp/>Git<sp/>post-commit<sp/>hook.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="121"><highlight class="normal"><sp/><sp/><sp/><sp/>uninstall_hook_parser.add_argument(</highlight><highlight class="stringliteral">&quot;-l&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;--location&quot;</highlight><highlight class="normal">,<sp/>required=</highlight><highlight class="keyword">False</highlight><highlight class="normal">,<sp/></highlight></codeline>
+<codeline lineno="122"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>help=</highlight><highlight class="stringliteral">&quot;Location<sp/>from<sp/>which<sp/>to<sp/>uninstall<sp/>the<sp/>Git<sp/>hook.<sp/>Defaults<sp/>to<sp/>current<sp/>directory.&quot;</highlight><highlight class="normal">,<sp/></highlight></codeline>
+<codeline lineno="123"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>default=os.getcwd())</highlight></codeline>
+<codeline lineno="124"><highlight class="normal"></highlight></codeline>
+<codeline lineno="125" refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a2006ab13bff718ef783868a910c0b704" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a2006ab13bff718ef783868a910c0b704" kindref="member">handle_docgen</ref>(args):</highlight></codeline>
+<codeline lineno="126"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Handle<sp/>various<sp/>subcommands<sp/>related<sp/>to<sp/>document<sp/>generation<sp/>and<sp/>hook</highlight></codeline>
+<codeline lineno="127"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>management.</highlight></codeline>
+<codeline lineno="128"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="129"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>processes<sp/>different<sp/>subcommands<sp/>such<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>installing<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="130"><highlight class="normal"><sp/><sp/><sp/><sp/>uninstalling<sp/>git<sp/>hooks,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>directly<sp/>generating<sp/>documentation<sp/>based<sp/>on</highlight></codeline>
+<codeline lineno="131"><highlight class="normal"><sp/><sp/><sp/><sp/>provided<sp/>arguments.</highlight></codeline>
+<codeline lineno="132"><highlight class="normal"></highlight></codeline>
+<codeline lineno="133"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="134"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>args<sp/>(Namespace):<sp/>Parsed<sp/>command-line<sp/>arguments<sp/>containing<sp/>the<sp/>subcommand<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>location</highlight></codeline>
+<codeline lineno="135"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>details.</highlight></codeline>
+<codeline lineno="136"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="137"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="138"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Only<sp/>import<sp/>dependencies<sp/>needed<sp/>for<sp/>docgen<sp/>functionality<sp/>here</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="139"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands" kindref="compound">penify_hook.commands.config_commands</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>get_token</highlight></codeline>
+<codeline lineno="140"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>sys</highlight></codeline>
+<codeline lineno="141"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1commands_1_1doc__commands" kindref="compound">penify_hook.commands.doc_commands</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>generate_doc</highlight></codeline>
+<codeline lineno="142"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1commands_1_1hook__commands" kindref="compound">penify_hook.commands.hook_commands</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>install_git_hook,<sp/>uninstall_git_hook</highlight></codeline>
+<codeline lineno="143"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1constants" kindref="compound">penify_hook.constants</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>API_URL</highlight></codeline>
+<codeline lineno="144"><highlight class="normal"></highlight></codeline>
+<codeline lineno="145"><highlight class="normal"><sp/><sp/><sp/><sp/>token<sp/>=<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a5503d51c905e2f1b299b12d2a73bd812" kindref="member">get_token</ref>()</highlight></codeline>
+<codeline lineno="146"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>token:</highlight></codeline>
+<codeline lineno="147"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logging.error(</highlight><highlight class="stringliteral">&quot;Error:<sp/>Unable<sp/>to<sp/>authenticate.<sp/>Please<sp/>run<sp/>&apos;penify<sp/>login&apos;.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="148"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>sys.exit(1)</highlight></codeline>
+<codeline lineno="149"><highlight class="normal"></highlight></codeline>
+<codeline lineno="150"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>args.docgen_subcommand<sp/>==<sp/></highlight><highlight class="stringliteral">&quot;install-hook&quot;</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="151"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1hook__commands_1adff8f5d3bf1c3795974a391ee95b72b2" kindref="member">install_git_hook</ref>(args.location,<sp/>token)</highlight></codeline>
+<codeline lineno="152"><highlight class="normal"></highlight></codeline>
+<codeline lineno="153"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">elif</highlight><highlight class="normal"><sp/>args.docgen_subcommand<sp/>==<sp/></highlight><highlight class="stringliteral">&quot;uninstall-hook&quot;</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="154"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1hook__commands_1a81543eb5fa835fd1237f24e8bce6201d" kindref="member">uninstall_git_hook</ref>(args.location)</highlight></codeline>
+<codeline lineno="155"><highlight class="normal"></highlight></codeline>
+<codeline lineno="156"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:<sp/><sp/></highlight><highlight class="comment">#<sp/>Direct<sp/>documentation<sp/>generation</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="157"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a4daac68bc563432bf25c85dc78081a25" kindref="member">generate_doc</ref>(API_URL,<sp/>token,<sp/>args.location)</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/doc_commands.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/doxyfile.xsd b/docs345/xml/doxyfile.xsd
new file mode 100644
index 0000000..fbfc2c1
--- /dev/null
+++ b/docs345/xml/doxyfile.xsd
@@ -0,0 +1,45 @@
+<?xml version='1.0' encoding='utf-8' ?>
+<xsd:schema xmlns:xsd="http://www.w3.org/2001/XMLSchema">
+  <xsd:import namespace="http://www.w3.org/XML/1998/namespace" schemaLocation="xml.xsd"/>
+
+  <xsd:element name="doxyfile" type="DoxygenFileType"/>
+
+  <xsd:complexType name="DoxygenFileType">
+    <xsd:sequence>
+      <xsd:element name="option" type="OptionType" minOccurs="0" maxOccurs="unbounded"/>
+    </xsd:sequence>
+    <xsd:attribute name="version" type="xsd:string" use="required"/>
+    <xsd:attribute ref="xml:lang" use="required"/>
+  </xsd:complexType>
+
+  <xsd:complexType name="OptionType">
+    <xsd:sequence>
+      <xsd:element name="value" type="valueType" minOccurs="0" maxOccurs="unbounded"/>
+    </xsd:sequence>
+    <xsd:attribute name="id" type="xsd:string" use="required"/>
+    <xsd:attribute name="default" type="defaultType" use="required"/>
+    <xsd:attribute name="type" type="typeType" use="required"/>
+  </xsd:complexType>
+
+  <xsd:simpleType name="valueType">
+    <xsd:restriction base="xsd:string">
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="defaultType">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="yes"/>
+      <xsd:enumeration value="no"/>
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="typeType">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="int"/>
+      <xsd:enumeration value="bool"/>
+      <xsd:enumeration value="string"/>
+      <xsd:enumeration value="stringlist"/>
+    </xsd:restriction>
+  </xsd:simpleType>
+
+</xsd:schema>
diff --git a/docs345/xml/example-workflows_8md.xml b/docs345/xml/example-workflows_8md.xml
new file mode 100644
index 0000000..24722e9
--- /dev/null
+++ b/docs345/xml/example-workflows_8md.xml
@@ -0,0 +1,156 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="example-workflows_8md" kind="file" language="Markdown">
+    <compoundname>example-workflows.md</compoundname>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline><highlight class="normal">#<sp/>Penify<sp/>CLI<sp/>Example<sp/>Workflows</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">This<sp/>document<sp/>demonstrates<sp/>how<sp/>to<sp/>use<sp/>Penify<sp/>CLI<sp/>in<sp/>real-world<sp/>development<sp/>workflows<sp/>to<sp/>improve<sp/>your<sp/>productivity.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Workflow<sp/>1:<sp/>Efficient<sp/>Git<sp/>Commits<sp/>with<sp/>AI</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Setup</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">First,<sp/>configure<sp/>your<sp/>local<sp/>LLM<sp/>for<sp/>offline<sp/>operation:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>config<sp/>llm</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Configure<sp/>your<sp/>JIRA<sp/>integration<sp/>for<sp/>enhanced<sp/>commit<sp/>messages:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>config<sp/>jira</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Daily<sp/>Workflow</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">1.<sp/>Make<sp/>your<sp/>code<sp/>changes<sp/>as<sp/>usual</highlight></codeline>
+<codeline><highlight class="normal">2.<sp/>When<sp/>ready<sp/>to<sp/>commit,<sp/>use<sp/>Penify<sp/>to<sp/>generate<sp/>a<sp/>smart<sp/>commit<sp/>message:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>commit</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">3.<sp/>Review<sp/>and<sp/>confirm<sp/>the<sp/>generated<sp/>commit<sp/>message</highlight></codeline>
+<codeline><highlight class="normal">4.<sp/>Git<sp/>commit<sp/>and<sp/>push<sp/>as<sp/>usual</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Benefits</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>Consistent<sp/>and<sp/>descriptive<sp/>commit<sp/>messages</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Automatic<sp/>inclusion<sp/>of<sp/>relevant<sp/>JIRA<sp/>ticket<sp/>information</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Time<sp/>saved<sp/>from<sp/>writing<sp/>detailed<sp/>commit<sp/>messages</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Workflow<sp/>2:<sp/>Documentation<sp/>Generation<sp/>Pipeline</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Setup</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Login<sp/>to<sp/>Penify<sp/>to<sp/>access<sp/>advanced<sp/>documentation<sp/>features:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>login</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Install<sp/>the<sp/>Git<sp/>hook<sp/>for<sp/>automatic<sp/>documentation<sp/>generation:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>install-hook</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Daily<sp/>Workflow</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">1.<sp/>Make<sp/>your<sp/>code<sp/>changes<sp/>as<sp/>usual</highlight></codeline>
+<codeline><highlight class="normal">2.<sp/>Commit<sp/>your<sp/>changes</highlight></codeline>
+<codeline><highlight class="normal">3.<sp/>Documentation<sp/>is<sp/>automatically<sp/>generated<sp/>for<sp/>changed<sp/>files</highlight></codeline>
+<codeline><highlight class="normal">4.<sp/>Review<sp/>the<sp/>generated<sp/>documentation</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Manual<sp/>Documentation</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">For<sp/>specific<sp/>files<sp/>or<sp/>folders:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>src/components/authentication</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Benefits</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>Always<sp/>up-to-date<sp/>documentation</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Consistent<sp/>documentation<sp/>style</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Time<sp/>saved<sp/>from<sp/>writing<sp/>detailed<sp/>documentation</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Workflow<sp/>3:<sp/>Code<sp/>Review<sp/>Enhancement</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Setup</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Ensure<sp/>you&apos;re<sp/>logged<sp/>into<sp/>Penify:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>login</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Workflow</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">1.<sp/>Before<sp/>submitting<sp/>a<sp/>PR,<sp/>generate<sp/>documentation<sp/>for<sp/>changed<sp/>files:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">2.<sp/>Include<sp/>the<sp/>generated<sp/>documentation<sp/>in<sp/>your<sp/>PR</highlight></codeline>
+<codeline><highlight class="normal">3.<sp/>Reviewers<sp/>can<sp/>better<sp/>understand<sp/>your<sp/>changes<sp/>with<sp/>the<sp/>AI-generated<sp/>explanations</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Benefits</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>Improved<sp/>PR<sp/>quality</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Faster<sp/>code<sp/>reviews</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Better<sp/>team<sp/>understanding<sp/>of<sp/>code<sp/>changes</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Workflow<sp/>4:<sp/>Onboarding<sp/>New<sp/>Team<sp/>Members</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>For<sp/>Team<sp/>Leads</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Generate<sp/>comprehensive<sp/>documentation<sp/>for<sp/>the<sp/>entire<sp/>codebase:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>.</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>For<sp/>New<sp/>Team<sp/>Members</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Generate<sp/>focused<sp/>documentation<sp/>for<sp/>components<sp/>you&apos;re<sp/>working<sp/>on:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>src/components/my-feature</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Benefits</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>Faster<sp/>onboarding</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Better<sp/>understanding<sp/>of<sp/>code<sp/>structure</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Reduced<sp/>questions<sp/>to<sp/>senior<sp/>team<sp/>members</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Workflow<sp/>5:<sp/>Legacy<sp/>Code<sp/>Understanding</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">When<sp/>working<sp/>with<sp/>unfamiliar<sp/>legacy<sp/>code:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Document<sp/>a<sp/>specific<sp/>complex<sp/>file</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>src/legacy/complex_module.py</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Document<sp/>an<sp/>entire<sp/>legacy<sp/>component</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>src/legacy/old_component</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Benefits</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>Quickly<sp/>understand<sp/>complex<sp/>legacy<sp/>systems</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Reduce<sp/>time<sp/>spent<sp/>deciphering<sp/>undocumented<sp/>code</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Make<sp/>safer<sp/>changes<sp/>to<sp/>legacy<sp/>systems</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/example-workflows.md"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/file__analyzer_8py.xml b/docs345/xml/file__analyzer_8py.xml
new file mode 100644
index 0000000..f47ec12
--- /dev/null
+++ b/docs345/xml/file__analyzer_8py.xml
@@ -0,0 +1,159 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="file__analyzer_8py" kind="file" language="Python">
+    <compoundname>file_analyzer.py</compoundname>
+    <innerclass refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook" prot="public">penify_hook::file_analyzer::FileAnalyzerGenHook</innerclass>
+    <innernamespace refid="namespacepenify__hook">penify_hook</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1file__analyzer">penify_hook::file_analyzer</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacepenify__hook_1_1file__analyzer" refkind="compound"><highlight class="keyword">import</highlight><highlight class="normal"><sp/>os</highlight></codeline>
+<codeline lineno="2"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>sys</highlight></codeline>
+<codeline lineno="3"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>git<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>Repo</highlight></codeline>
+<codeline lineno="4"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>tqdm<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>tqdm</highlight></codeline>
+<codeline lineno="5"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>time</highlight></codeline>
+<codeline lineno="6"><highlight class="normal"></highlight></codeline>
+<codeline lineno="7"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1base__analyzer" kindref="compound">penify_hook.base_analyzer</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>BaseAnalyzer</highlight></codeline>
+<codeline lineno="8"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1utils" kindref="compound">penify_hook.utils</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>get_repo_details,<sp/>recursive_search_git_folder</highlight></codeline>
+<codeline lineno="9"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>.api_client<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>APIClient</highlight></codeline>
+<codeline lineno="10"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>logging</highlight></codeline>
+<codeline lineno="11"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>.ui_utils<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>(</highlight></codeline>
+<codeline lineno="12"><highlight class="normal"><sp/><sp/><sp/><sp/>format_highlight,<sp/>print_info,<sp/>print_success,<sp/>print_warning,<sp/>print_error,</highlight></codeline>
+<codeline lineno="13"><highlight class="normal"><sp/><sp/><sp/><sp/>print_status,<sp/>create_stage_progress_bar,</highlight></codeline>
+<codeline lineno="14"><highlight class="normal"><sp/><sp/><sp/><sp/>update_stage,<sp/>format_file_path</highlight></codeline>
+<codeline lineno="15"><highlight class="normal">)</highlight></codeline>
+<codeline lineno="16"><highlight class="normal"></highlight></codeline>
+<codeline lineno="17"><highlight class="normal"></highlight><highlight class="comment">#<sp/>Set<sp/>up<sp/>logger</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="18" refid="namespacepenify__hook_1_1file__analyzer_1af419a4965f079d58cac5a5281ddb1828" refkind="member"><highlight class="normal">logger<sp/>=<sp/>logging.getLogger(__name__)</highlight></codeline>
+<codeline lineno="19"><highlight class="normal"></highlight></codeline>
+<codeline lineno="20" refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook" kindref="compound">FileAnalyzerGenHook</ref>(<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer" kindref="compound">BaseAnalyzer</ref>):</highlight></codeline>
+<codeline lineno="21" refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a190c473090b2a07e7cb43073a3211c4b" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a190c473090b2a07e7cb43073a3211c4b" kindref="member">__init__</ref>(self,<sp/>file_path:<sp/>str,<sp/>api_client:<sp/>APIClient):</highlight></codeline>
+<codeline lineno="22" refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a9b03b88a9ce1b9af945279375048dc32" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a9b03b88a9ce1b9af945279375048dc32" kindref="member">file_path</ref><sp/>=<sp/>file_path</highlight></codeline>
+<codeline lineno="23"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>super().<ref refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a190c473090b2a07e7cb43073a3211c4b" kindref="member">__init__</ref>(file_path,<sp/>api_client)</highlight></codeline>
+<codeline lineno="24"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="25"><highlight class="normal"></highlight></codeline>
+<codeline lineno="26"><highlight class="normal"></highlight></codeline>
+<codeline lineno="27" refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a2cc6c22ef588fccf3eed9bbc57fb6d6e" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a2cc6c22ef588fccf3eed9bbc57fb6d6e" kindref="member">process_file</ref>(self,<sp/>file_path,<sp/>pbar,<sp/>new_param:<sp/>str<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;&quot;</highlight><highlight class="normal">):</highlight></codeline>
+<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Processes<sp/>a<sp/>file<sp/>by<sp/>validating<sp/>its<sp/>extension,<sp/>reading<sp/>content,<sp/>generating<sp/>documentation,</highlight></codeline>
+<codeline lineno="29"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>writing<sp/>changes<sp/>back<sp/>to<sp/>the<sp/>file.</highlight></codeline>
+<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="31"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>file_path<sp/>(str):<sp/>The<sp/>path<sp/>of<sp/>the<sp/>file<sp/>to<sp/>be<sp/>processed.</highlight></codeline>
+<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pbar<sp/>(tqdm.tqdm):<sp/>A<sp/>progress<sp/>bar<sp/>object<sp/>to<sp/>update<sp/>the<sp/>status<sp/>of<sp/>processing<sp/>stages.</highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="34"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>file_abs_path<sp/>=<sp/>os.path.join(os.getcwd(),<sp/>file_path)</highlight></codeline>
+<codeline lineno="35"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>file_extension<sp/>=<sp/>os.path.splitext(file_path)[1].lower()</highlight></codeline>
+<codeline lineno="36"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="37"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>---<sp/>STAGE<sp/>1:<sp/>Validating<sp/>---</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a5a7340d0fc60fb80f17514d60bf45f1d" kindref="member">update_stage</ref>(pbar,<sp/></highlight><highlight class="stringliteral">&quot;Validating&quot;</highlight><highlight class="normal">)<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>file_extension:</highlight></codeline>
+<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a1ffbb9671dbe233770268e2dd66a67fa" kindref="member">print_warning</ref>(f</highlight><highlight class="stringliteral">&quot;<sp/><sp/>Empty<sp/>extension<sp/>is<sp/>not<sp/>supported.<sp/>Skipping<sp/>&apos;{self.relative_file_path}&apos;.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="42"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>file_extension<sp/>=<sp/>file_extension[1:]<sp/><sp/></highlight><highlight class="comment">#<sp/>Remove<sp/>the<sp/>leading<sp/>dot</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="44"><highlight class="normal"></highlight></codeline>
+<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>file_extension<sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a0cac0310ec635aa64a34857cf30ce1eb" kindref="member">supported_file_types</ref>:</highlight></codeline>
+<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a1ffbb9671dbe233770268e2dd66a67fa" kindref="member">print_warning</ref>(f</highlight><highlight class="stringliteral">&quot;<sp/><sp/>File<sp/>type<sp/>&apos;{file_extension}&apos;<sp/>is<sp/>not<sp/>supported.<sp/>Skipping<sp/>&apos;{self.relative_file_path}&apos;.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="48"><highlight class="normal"></highlight></codeline>
+<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Update<sp/>progress<sp/>bar<sp/>to<sp/>indicate<sp/>we&apos;re<sp/>moving<sp/>to<sp/>next<sp/>stage</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pbar.update(1)</highlight></codeline>
+<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>---<sp/>STAGE<sp/>2:<sp/>Reading<sp/>content<sp/>---</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a5a7340d0fc60fb80f17514d60bf45f1d" kindref="member">update_stage</ref>(pbar,<sp/></highlight><highlight class="stringliteral">&quot;Reading<sp/>content&quot;</highlight><highlight class="normal">)<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>open(file_abs_path,<sp/></highlight><highlight class="stringliteral">&apos;r&apos;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>file:</highlight></codeline>
+<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>content<sp/>=<sp/>file.read()</highlight></codeline>
+<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logger.error(f</highlight><highlight class="stringliteral">&quot;Error<sp/>reading<sp/>file<sp/>{file_path}:<sp/>{str(e)}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="60"><highlight class="normal"></highlight></codeline>
+<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>modified_lines<sp/>=<sp/>[i<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>i<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>range(len(content.splitlines()))]</highlight></codeline>
+<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Update<sp/>progress<sp/>bar<sp/>to<sp/>indicate<sp/>we&apos;re<sp/>moving<sp/>to<sp/>next<sp/>stage</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pbar.update(1)</highlight></codeline>
+<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>---<sp/>STAGE<sp/>3:<sp/>Documenting<sp/>---</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a5a7340d0fc60fb80f17514d60bf45f1d" kindref="member">update_stage</ref>(pbar,<sp/></highlight><highlight class="stringliteral">&quot;Documenting&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>response<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a81e9c55709205aaf4ebbe2b41683baf2" kindref="member">api_client</ref>.send_file_for_docstring_generation(self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1ab702c0c3ba81d159d7c3bcd7ea2abba4" kindref="member">relative_file_path</ref>,<sp/>content,<sp/>modified_lines,<sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a9cca3465b0cc00d78324b0a9eac1d7f5" kindref="member">repo_details</ref>)</highlight></codeline>
+<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>response<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="73"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>response<sp/>==<sp/>content:</highlight></codeline>
+<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logger.info(f</highlight><highlight class="stringliteral">&quot;No<sp/>changes<sp/>needed<sp/>for<sp/>{file_path}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="78"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Update<sp/>progress<sp/>bar<sp/>to<sp/>indicate<sp/>we&apos;re<sp/>moving<sp/>to<sp/>next<sp/>stage</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pbar.update(1)</highlight></codeline>
+<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>---<sp/>STAGE<sp/>4:<sp/>Writing<sp/>changes<sp/>---</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a5a7340d0fc60fb80f17514d60bf45f1d" kindref="member">update_stage</ref>(pbar,<sp/></highlight><highlight class="stringliteral">&quot;Writing<sp/>changes&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="85"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>open(file_abs_path,<sp/></highlight><highlight class="stringliteral">&apos;w&apos;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>file:</highlight></codeline>
+<codeline lineno="86"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>file.write(response)</highlight></codeline>
+<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logger.info(f</highlight><highlight class="stringliteral">&quot;Updated<sp/>file<sp/>{file_path}<sp/>with<sp/>generated<sp/>documentation&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Mark<sp/>final<sp/>stage<sp/>as<sp/>complete</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="90"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pbar.update(1)</highlight></codeline>
+<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="92"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="93"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logger.error(f</highlight><highlight class="stringliteral">&quot;Error<sp/>writing<sp/>file<sp/>{file_path}:<sp/>{str(e)}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="94"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="95"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="96" refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a6ab39391dfb7686f2a2d21a702dd3073" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a6ab39391dfb7686f2a2d21a702dd3073" kindref="member">print_processing</ref>(self,<sp/>file_path):</highlight></codeline>
+<codeline lineno="97"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Prints<sp/>a<sp/>formatted<sp/>message<sp/>indicating<sp/>that<sp/>a<sp/>file<sp/>is<sp/>being<sp/>processed.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="98"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>formatted_path<sp/>=<sp/><ref refid="namespacepenify__hook_1_1ui__utils_1af3441fb3c2c3850b8b3b6455a9fdaba4" kindref="member">format_file_path</ref>(file_path)</highlight></codeline>
+<codeline lineno="99"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;\n{format_highlight(f&apos;Processing<sp/>file:<sp/>{formatted_path}&apos;)}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="100"><highlight class="normal"></highlight></codeline>
+<codeline lineno="101" refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a4f4dffbc432fac3e259d957dd1e187f1" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a4f4dffbc432fac3e259d957dd1e187f1" kindref="member">run</ref>(self):</highlight></codeline>
+<codeline lineno="102"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="103"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Create<sp/>a<sp/>progress<sp/>bar<sp/>with<sp/>appropriate<sp/>stages</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="104"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Runs<sp/>the<sp/>documentation<sp/>process<sp/>with<sp/>a<sp/>progress<sp/>bar.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="105"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>stages<sp/>=<sp/>[</highlight><highlight class="stringliteral">&quot;Validating&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;Reading<sp/>content&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;Documenting&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;Writing<sp/>changes&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;Completed&quot;</highlight><highlight class="normal">]</highlight></codeline>
+<codeline lineno="106"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pbar,<sp/>_<sp/>=<sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a3da02cd1140179a9ce60f62c85fccfef" kindref="member">create_stage_progress_bar</ref>(stages,<sp/>f</highlight><highlight class="stringliteral">&quot;Starting<sp/>documenting&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="107"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="108"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="109"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Print<sp/>a<sp/>clear<sp/>indication<sp/>of<sp/>which<sp/>file<sp/>is<sp/>being<sp/>processed</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="110"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>self.print_processing(self.file_path)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="111"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="112"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Process<sp/>the<sp/>file</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="113"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a2cc6c22ef588fccf3eed9bbc57fb6d6e" kindref="member">process_file</ref>(self.<ref refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a9b03b88a9ce1b9af945279375048dc32" kindref="member">file_path</ref>,<sp/>pbar)</highlight></codeline>
+<codeline lineno="114"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="115"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Ensure<sp/>all<sp/>stages<sp/>are<sp/>completed</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="116"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>remaining_steps<sp/>=<sp/>len(stages)<sp/>-<sp/>pbar.n</highlight></codeline>
+<codeline lineno="117"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pbar.update(remaining_steps)</highlight></codeline>
+<codeline lineno="118"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="119"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="120"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Display<sp/>appropriate<sp/>message<sp/>based<sp/>on<sp/>result</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="121"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>remaining<sp/>=<sp/>len(stages)<sp/>-<sp/>pbar.n</highlight></codeline>
+<codeline lineno="122"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>remaining<sp/>&gt;<sp/>0:</highlight></codeline>
+<codeline lineno="123"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pbar.update(remaining)</highlight></codeline>
+<codeline lineno="124"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a5a7340d0fc60fb80f17514d60bf45f1d" kindref="member">update_stage</ref>(pbar,<sp/></highlight><highlight class="stringliteral">&quot;Complete&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="125"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pbar.clear()</highlight></codeline>
+<codeline lineno="126"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pbar.close()</highlight></codeline>
+<codeline lineno="127"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="128"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="129"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>remaining<sp/>=<sp/>len(stages)<sp/>-<sp/>pbar.n</highlight></codeline>
+<codeline lineno="130"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>remaining<sp/>&gt;<sp/>0:</highlight></codeline>
+<codeline lineno="131"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pbar.update(remaining)</highlight></codeline>
+<codeline lineno="132"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a5a7340d0fc60fb80f17514d60bf45f1d" kindref="member">update_stage</ref>(pbar,<sp/></highlight><highlight class="stringliteral">&quot;Complete&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="133"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pbar.clear()</highlight></codeline>
+<codeline lineno="134"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pbar.close()</highlight></codeline>
+<codeline lineno="135"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1aa6e684c00e26199440137a87ed9b195c" kindref="member">print_status</ref>(</highlight><highlight class="stringliteral">&apos;error&apos;</highlight><highlight class="normal">,<sp/>e)</highlight></codeline>
+<codeline lineno="136"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>sys.exit(1)</highlight></codeline>
+<codeline lineno="137"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="138"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Ensure<sp/>progress<sp/>bar<sp/>completes<sp/>even<sp/>on<sp/>error</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="139"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>result:</highlight></codeline>
+<codeline lineno="140"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a2b16aa6b68a9edea5f29f84f1c4be79a" kindref="member">print_success</ref>(f</highlight><highlight class="stringliteral">&quot;\n✓<sp/>Documentation<sp/>updated<sp/>for<sp/>{self.relative_file_path}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="141"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="142"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a2b16aa6b68a9edea5f29f84f1c4be79a" kindref="member">print_success</ref>(f</highlight><highlight class="stringliteral">&quot;\n✓<sp/>No<sp/>changes<sp/>needed<sp/>for<sp/>{self.relative_file_path}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="143"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/file_analyzer.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/folder__analyzer_8py.xml b/docs345/xml/folder__analyzer_8py.xml
new file mode 100644
index 0000000..37829c6
--- /dev/null
+++ b/docs345/xml/folder__analyzer_8py.xml
@@ -0,0 +1,82 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="folder__analyzer_8py" kind="file" language="Python">
+    <compoundname>folder_analyzer.py</compoundname>
+    <innerclass refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook" prot="public">penify_hook::folder_analyzer::FolderAnalyzerGenHook</innerclass>
+    <innernamespace refid="namespacepenify__hook">penify_hook</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1folder__analyzer">penify_hook::folder_analyzer</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacepenify__hook_1_1folder__analyzer" refkind="compound"><highlight class="keyword">import</highlight><highlight class="normal"><sp/>os</highlight></codeline>
+<codeline lineno="2"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>git<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>Repo</highlight></codeline>
+<codeline lineno="3"><highlight class="normal"></highlight></codeline>
+<codeline lineno="4"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1base__analyzer" kindref="compound">penify_hook.base_analyzer</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>BaseAnalyzer</highlight></codeline>
+<codeline lineno="5"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>.api_client<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>APIClient</highlight></codeline>
+<codeline lineno="6"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>.file_analyzer<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>FileAnalyzerGenHook</highlight></codeline>
+<codeline lineno="7"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>tqdm<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>tqdm</highlight></codeline>
+<codeline lineno="8"><highlight class="normal"></highlight></codeline>
+<codeline lineno="9" refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook" kindref="compound">FolderAnalyzerGenHook</ref>(<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer" kindref="compound">BaseAnalyzer</ref>):</highlight></codeline>
+<codeline lineno="10" refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a1bb0358140931d82c7616f12efe31821" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a1bb0358140931d82c7616f12efe31821" kindref="member">__init__</ref>(self,<sp/>dir_path:<sp/>str,<sp/>api_client:<sp/>APIClient):</highlight></codeline>
+<codeline lineno="11" refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a53f73d69cc0f00763ee4830e4f0f7393" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a53f73d69cc0f00763ee4830e4f0f7393" kindref="member">dir_path</ref><sp/>=<sp/>dir_path</highlight></codeline>
+<codeline lineno="12"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>super().<ref refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a1bb0358140931d82c7616f12efe31821" kindref="member">__init__</ref>(dir_path,<sp/>api_client)</highlight></codeline>
+<codeline lineno="13"><highlight class="normal"></highlight></codeline>
+<codeline lineno="14" refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a70b845318fc7ac3b607daf26378e19ec" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a70b845318fc7ac3b607daf26378e19ec" kindref="member">list_all_files_in_dir</ref>(self,<sp/>dir_path:<sp/>str):</highlight></codeline>
+<codeline lineno="15"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;List<sp/>all<sp/>non-hidden<sp/>files<sp/>in<sp/>a<sp/>directory<sp/>and<sp/>its<sp/>subdirectories.</highlight></codeline>
+<codeline lineno="16"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="17"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>recursively<sp/>traverses<sp/>the<sp/>specified<sp/>directory<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>its</highlight></codeline>
+<codeline lineno="18"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>subdirectories,<sp/>collecting<sp/>paths<sp/>of<sp/>all<sp/>non-hidden<sp/>files.<sp/>It<sp/>filters<sp/>out</highlight></codeline>
+<codeline lineno="19"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>hidden<sp/>directories<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>files<sp/>(those<sp/>starting<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>a<sp/>dot)<sp/>to<sp/>ensure<sp/>only</highlight></codeline>
+<codeline lineno="20"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>visible<sp/>files<sp/>are<sp/>returned.</highlight></codeline>
+<codeline lineno="21"><highlight class="normal"></highlight></codeline>
+<codeline lineno="22"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="23"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>dir_path<sp/>(str):<sp/>The<sp/>path<sp/>to<sp/>the<sp/>directory<sp/>whose<sp/>files<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>subdirectory<sp/>files<sp/>need<sp/>to<sp/>be</highlight></codeline>
+<codeline lineno="24"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>listed.</highlight></codeline>
+<codeline lineno="25"><highlight class="normal"></highlight></codeline>
+<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="27"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>list:<sp/>A<sp/>list<sp/>containing<sp/>the<sp/>full<sp/>paths<sp/>of<sp/>all<sp/>non-hidden<sp/>files<sp/>within<sp/>the</highlight></codeline>
+<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>specified<sp/>directory<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>its<sp/>subdirectories.</highlight></codeline>
+<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="30"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="31"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>files<sp/>=<sp/>[]</highlight></codeline>
+<codeline lineno="32"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>dirpath,<sp/>dirnames,<sp/>filenames<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>os.walk(dir_path):</highlight></codeline>
+<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>dirnames[:]<sp/>=<sp/>[d<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>d<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>dirnames<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>d.startswith(</highlight><highlight class="stringliteral">&quot;.&quot;</highlight><highlight class="normal">)]</highlight></codeline>
+<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>filename<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>filenames:</highlight></codeline>
+<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Construct<sp/>the<sp/>full<sp/>file<sp/>path</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>full_path<sp/>=<sp/>os.path.join(dirpath,<sp/>filename)</highlight></codeline>
+<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>files.append(full_path)</highlight></codeline>
+<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>files</highlight></codeline>
+<codeline lineno="39"><highlight class="normal"></highlight></codeline>
+<codeline lineno="40" refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1afd189d1b8c773bf710a899eb21fd76cc" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1afd189d1b8c773bf710a899eb21fd76cc" kindref="member">run</ref>(self):</highlight></codeline>
+<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Run<sp/>the<sp/>post-commit<sp/>hook.</highlight></codeline>
+<codeline lineno="42"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="43"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>processes<sp/>all<sp/>files<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>a<sp/>specified<sp/>directory<sp/>using<sp/>a</highlight></codeline>
+<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>progress<sp/>bar.<sp/>It<sp/>lists<sp/>all<sp/>files,<sp/>initializes<sp/>a<sp/>`FileAnalyzerGenHook`</highlight></codeline>
+<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>each<sp/>file,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>runs<sp/>it.<sp/>Errors<sp/>during<sp/>processing<sp/>of<sp/>individual<sp/>files</highlight></codeline>
+<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>are<sp/>caught<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>logged,<sp/>but<sp/>do<sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>stop<sp/>the<sp/>processing<sp/>of<sp/>other<sp/>files.<sp/>A</highlight></codeline>
+<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>progress<sp/>bar<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>displayed<sp/>indicating<sp/>the<sp/>number<sp/>of<sp/>files<sp/>processed.</highlight></codeline>
+<codeline lineno="48"><highlight class="normal"></highlight></codeline>
+<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self<sp/>(PostCommitHook):<sp/>The<sp/>instance<sp/>of<sp/>the<sp/>post-commit<sp/>hook<sp/></highlight><highlight class="keyword">class</highlight><highlight class="normal">.</highlight></codeline>
+<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="52"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>file_list<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a70b845318fc7ac3b607daf26378e19ec" kindref="member">list_all_files_in_dir</ref>(self.<ref refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a53f73d69cc0f00763ee4830e4f0f7393" kindref="member">dir_path</ref>)</highlight></codeline>
+<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>total_files<sp/>=<sp/>len(file_list)</highlight></codeline>
+<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Processing<sp/>{total_files}<sp/>files<sp/>in<sp/>folder<sp/>[{self.dir_path}]&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>tqdm(total=total_files,<sp/>desc=</highlight><highlight class="stringliteral">&quot;Processing<sp/>files&quot;</highlight><highlight class="normal">,<sp/>unit=</highlight><highlight class="stringliteral">&quot;file&quot;</highlight><highlight class="normal">,<sp/>ncols=80,<sp/>ascii=</highlight><highlight class="keyword">True</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>pbar:</highlight></codeline>
+<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>file_path<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>file_list:</highlight></codeline>
+<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>analyzer<sp/>=<sp/><ref refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook" kindref="compound">FileAnalyzerGenHook</ref>(file_path,<sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a81e9c55709205aaf4ebbe2b41683baf2" kindref="member">api_client</ref>)</highlight></codeline>
+<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>analyzer.run()</highlight></codeline>
+<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>file_error:</highlight></codeline>
+<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Error<sp/>processing<sp/>file<sp/>[{file_path}]:<sp/>{file_error}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pbar.update(1)<sp/><sp/></highlight><highlight class="comment">#<sp/>Even<sp/>if<sp/>there<sp/>is<sp/>an<sp/>error,<sp/>move<sp/>the<sp/>progress<sp/>bar<sp/>forward</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;File<sp/>[{self.dir_path}]<sp/>was<sp/>not<sp/>processed<sp/>due<sp/>to<sp/>error:<sp/>{e}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/folder_analyzer.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/git__analyzer_8py.xml b/docs345/xml/git__analyzer_8py.xml
new file mode 100644
index 0000000..0414b73
--- /dev/null
+++ b/docs345/xml/git__analyzer_8py.xml
@@ -0,0 +1,212 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="git__analyzer_8py" kind="file" language="Python">
+    <compoundname>git_analyzer.py</compoundname>
+    <innerclass refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook" prot="public">penify_hook::git_analyzer::GitDocGenHook</innerclass>
+    <innernamespace refid="namespacepenify__hook">penify_hook</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1git__analyzer">penify_hook::git_analyzer</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacepenify__hook_1_1git__analyzer" refkind="compound"><highlight class="keyword">import</highlight><highlight class="normal"><sp/>os</highlight></codeline>
+<codeline lineno="2"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>re</highlight></codeline>
+<codeline lineno="3"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>git<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>Repo</highlight></codeline>
+<codeline lineno="4"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>tqdm<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>tqdm</highlight></codeline>
+<codeline lineno="5"><highlight class="normal"></highlight></codeline>
+<codeline lineno="6"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1base__analyzer" kindref="compound">penify_hook.base_analyzer</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>BaseAnalyzer</highlight></codeline>
+<codeline lineno="7"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1utils" kindref="compound">penify_hook.utils</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>get_repo_details,<sp/>recursive_search_git_folder</highlight></codeline>
+<codeline lineno="8"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>.api_client<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>APIClient</highlight></codeline>
+<codeline lineno="9"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>logging</highlight></codeline>
+<codeline lineno="10"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>.ui_utils<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>(</highlight></codeline>
+<codeline lineno="11"><highlight class="normal"><sp/><sp/><sp/><sp/>print_info,<sp/>print_success,<sp/>print_warning,<sp/>print_error,</highlight></codeline>
+<codeline lineno="12"><highlight class="normal"><sp/><sp/><sp/><sp/>print_processing,<sp/>print_status,<sp/>create_progress_bar,</highlight></codeline>
+<codeline lineno="13"><highlight class="normal"><sp/><sp/><sp/><sp/>format_file_path</highlight></codeline>
+<codeline lineno="14"><highlight class="normal">)</highlight></codeline>
+<codeline lineno="15"><highlight class="normal"></highlight></codeline>
+<codeline lineno="16"><highlight class="normal"></highlight><highlight class="comment">#<sp/>Set<sp/>up<sp/>logger</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="17" refid="namespacepenify__hook_1_1git__analyzer_1ac4ce143fdca789a79c66852c37d7363a" refkind="member"><highlight class="normal">logger<sp/>=<sp/>logging.getLogger(__name__)</highlight></codeline>
+<codeline lineno="18"><highlight class="normal"></highlight></codeline>
+<codeline lineno="19" refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook" kindref="compound">GitDocGenHook</ref>(<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer" kindref="compound">BaseAnalyzer</ref>):</highlight></codeline>
+<codeline lineno="20" refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a92275fddb43dbef6dfdb6c1ed6e96d0c" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a92275fddb43dbef6dfdb6c1ed6e96d0c" kindref="member">__init__</ref>(self,<sp/>repo_path:<sp/>str,<sp/>api_client:<sp/>APIClient):</highlight></codeline>
+<codeline lineno="21"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>super().<ref refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a92275fddb43dbef6dfdb6c1ed6e96d0c" kindref="member">__init__</ref>(repo_path,<sp/>api_client)</highlight></codeline>
+<codeline lineno="22"><highlight class="normal"></highlight></codeline>
+<codeline lineno="23" refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a17549766100e91eb94b5f1a1d34bf481" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a17549766100e91eb94b5f1a1d34bf481" kindref="member">get_modified_files_in_last_commit</ref>(self):</highlight></codeline>
+<codeline lineno="24"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Get<sp/>the<sp/>list<sp/>of<sp/>files<sp/>modified<sp/>in<sp/>the<sp/>last<sp/>commit.</highlight></codeline>
+<codeline lineno="25"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="26"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>retrieves<sp/>the<sp/>files<sp/>that<sp/>were<sp/>modified<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the<sp/>most<sp/>recent</highlight></codeline>
+<codeline lineno="27"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>commit<sp/>of<sp/>the<sp/>repository.<sp/>It<sp/>accesses<sp/>the<sp/>last<sp/>commit<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>iterates</highlight></codeline>
+<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>through<sp/>the<sp/>differences<sp/>to<sp/>compile<sp/>a<sp/>list<sp/>of<sp/>unique<sp/>file<sp/>paths<sp/>that<sp/>were</highlight></codeline>
+<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>changed.<sp/>The<sp/>function<sp/>returns<sp/>this<sp/>list<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>further<sp/>processing<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>analysis.</highlight></codeline>
+<codeline lineno="31"><highlight class="normal"></highlight></codeline>
+<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>list:<sp/>A<sp/>list<sp/>of<sp/>file<sp/>paths<sp/>that<sp/>were<sp/>modified<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the<sp/>last<sp/>commit.</highlight></codeline>
+<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="35"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>last_commit<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a3a9ddfa1dfba81fe21214fe486389369" kindref="member">repo</ref>.head.commit</highlight></codeline>
+<codeline lineno="36"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>modified_files<sp/>=<sp/>[]</highlight></codeline>
+<codeline lineno="37"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>diff<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>last_commit.diff(</highlight><highlight class="stringliteral">&apos;HEAD~1&apos;</highlight><highlight class="normal">):</highlight></codeline>
+<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>diff.a_path<sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>modified_files:</highlight></codeline>
+<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>modified_files.append(diff.a_path)</highlight></codeline>
+<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>modified_files</highlight></codeline>
+<codeline lineno="41"><highlight class="normal"></highlight></codeline>
+<codeline lineno="42" refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a974d2f51315ed6a1965a7fd7e2ced0cd" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a974d2f51315ed6a1965a7fd7e2ced0cd" kindref="member">get_modified_lines</ref>(self,<sp/>diff_text):</highlight></codeline>
+<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Extract<sp/>modified<sp/>line<sp/>numbers<sp/>from<sp/>a<sp/>diff<sp/>text.</highlight></codeline>
+<codeline lineno="44"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="45"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>processes<sp/>a<sp/>diff<sp/>text<sp/>to<sp/>identify<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>extract<sp/>the<sp/>line</highlight></codeline>
+<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>numbers<sp/>that<sp/>have<sp/>been<sp/>modified.<sp/>It<sp/>distinguishes<sp/>between<sp/>added<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>deleted<sp/>lines<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>keeps<sp/>track<sp/>of<sp/>the<sp/>current<sp/>line<sp/>number<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>it<sp/>parses</highlight></codeline>
+<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>through<sp/>the<sp/>diff.<sp/>The<sp/>function<sp/>handles<sp/>hunk<sp/>headers<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>ensures<sp/>that<sp/>any</highlight></codeline>
+<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>deletions<sp/>at<sp/>the<sp/>end<sp/>of<sp/>the<sp/>file<sp/>are<sp/>also<sp/>captured.</highlight></codeline>
+<codeline lineno="50"><highlight class="normal"></highlight></codeline>
+<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>diff_text<sp/>(str):<sp/>A<sp/>string<sp/>containing<sp/>the<sp/>diff<sp/>text<sp/>to<sp/>be<sp/>processed.</highlight></codeline>
+<codeline lineno="53"><highlight class="normal"></highlight></codeline>
+<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>list:<sp/>A<sp/>sorted<sp/>list<sp/>of<sp/>unique<sp/>line<sp/>numbers<sp/>that<sp/>have<sp/>been<sp/>modified.</highlight></codeline>
+<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="57"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>modified_lines<sp/>=<sp/>[]</highlight></codeline>
+<codeline lineno="58"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>current_line<sp/>=<sp/>0</highlight></codeline>
+<codeline lineno="59"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>deletion_start<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="60"><highlight class="normal"></highlight></codeline>
+<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>line<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>diff_text.splitlines():</highlight></codeline>
+<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>line.startswith(</highlight><highlight class="stringliteral">&apos;@@&apos;</highlight><highlight class="normal">):</highlight></codeline>
+<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Parse<sp/>the<sp/>hunk<sp/>header</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>_,<sp/>old,<sp/>new,<sp/>_<sp/>=<sp/>line.split(</highlight><highlight class="stringliteral">&apos;<sp/>&apos;</highlight><highlight class="normal">,<sp/>3)</highlight></codeline>
+<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>current_line<sp/>=<sp/>int(new.split(</highlight><highlight class="stringliteral">&apos;,&apos;</highlight><highlight class="normal">)[0].strip(</highlight><highlight class="stringliteral">&apos;+&apos;</highlight><highlight class="normal">))</highlight></codeline>
+<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>deletion_start<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">elif</highlight><highlight class="normal"><sp/>line.startswith(</highlight><highlight class="stringliteral">&apos;-&apos;</highlight><highlight class="normal">):</highlight></codeline>
+<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>This<sp/>is<sp/>a<sp/>deleted<sp/>line</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>deletion_start<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>deletion_start<sp/>=<sp/>current_line</highlight></codeline>
+<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">elif</highlight><highlight class="normal"><sp/>line.startswith(</highlight><highlight class="stringliteral">&apos;+&apos;</highlight><highlight class="normal">):</highlight></codeline>
+<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>This<sp/>is<sp/>an<sp/>added<sp/>line</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="73"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>modified_lines.append(current_line)</highlight></codeline>
+<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>current_line<sp/>+=<sp/>1</highlight></codeline>
+<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>deletion_start<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>modified_lines.append(deletion_start)</highlight></codeline>
+<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>deletion_start<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="78"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>This<sp/>is<sp/>an<sp/>unchanged<sp/>line</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>current_line<sp/>+=<sp/>1</highlight></codeline>
+<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>deletion_start<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>modified_lines.append(deletion_start)</highlight></codeline>
+<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>deletion_start<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="84"><highlight class="normal"></highlight></codeline>
+<codeline lineno="85"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Handle<sp/>case<sp/>where<sp/>deletion<sp/>is<sp/>at<sp/>the<sp/>end<sp/>of<sp/>the<sp/>file</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="86"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>deletion_start<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>modified_lines.append(deletion_start)</highlight></codeline>
+<codeline lineno="88"><highlight class="normal"></highlight></codeline>
+<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>sorted(set(modified_lines))<sp/><sp/></highlight><highlight class="comment">#<sp/>Remove<sp/>duplicates<sp/>and<sp/>sort</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="90"><highlight class="normal"></highlight></codeline>
+<codeline lineno="91" refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a05313caa22b173ce75638f0db08eeb85" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a05313caa22b173ce75638f0db08eeb85" kindref="member">process_file</ref>(self,<sp/>file_path):</highlight></codeline>
+<codeline lineno="92"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Process<sp/>a<sp/>file<sp/>by<sp/>checking<sp/>its<sp/>type,<sp/>reading<sp/>its<sp/>content,<sp/>and<sp/>sending<sp/>it</highlight></codeline>
+<codeline lineno="93"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>to<sp/>an<sp/>API.</highlight></codeline>
+<codeline lineno="94"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="95"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>method<sp/>constructs<sp/>the<sp/>absolute<sp/>path<sp/>of<sp/>the<sp/>specified<sp/>file<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="96"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>verifies<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>the<sp/>file<sp/>has<sp/>a<sp/>valid<sp/>extension.<sp/>If<sp/>the<sp/>file<sp/>type<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="97"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>supported,<sp/>it<sp/>reads<sp/>the<sp/>content<sp/>of<sp/>the<sp/>file<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>retrieves<sp/>the</highlight></codeline>
+<codeline lineno="98"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>differences<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>the<sp/>last<sp/>commit<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the<sp/>repository.<sp/>If<sp/>changes<sp/>are</highlight></codeline>
+<codeline lineno="99"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>detected,<sp/>it<sp/>sends<sp/>the<sp/>file<sp/>content<sp/>along<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>the<sp/>modified<sp/>lines<sp/>to<sp/>an</highlight></codeline>
+<codeline lineno="100"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>API<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>further<sp/>processing.<sp/>If<sp/>the<sp/>API<sp/>response<sp/>indicates<sp/>no<sp/>changes,</highlight></codeline>
+<codeline lineno="101"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>the<sp/>original<sp/>file<sp/>will<sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>be<sp/>overwritten.</highlight></codeline>
+<codeline lineno="102"><highlight class="normal"></highlight></codeline>
+<codeline lineno="103"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="104"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>file_path<sp/>(str):<sp/>The<sp/>relative<sp/>path<sp/>to<sp/>the<sp/>file<sp/>to<sp/>be<sp/>processed.</highlight></codeline>
+<codeline lineno="105"><highlight class="normal"></highlight></codeline>
+<codeline lineno="106"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="107"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>bool:<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>the<sp/>file<sp/>was<sp/>successfully<sp/>processed<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>updated,<sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="108"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>otherwise.</highlight></codeline>
+<codeline lineno="109"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="110"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>file_abs_path<sp/>=<sp/>os.path.join(self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a957e81a1ab561f6cecfbe999e7b85499" kindref="member">repo_path</ref>,<sp/>file_path)</highlight></codeline>
+<codeline lineno="111"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>file_extension<sp/>=<sp/>os.path.splitext(file_path)[1].lower()</highlight></codeline>
+<codeline lineno="112"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="113"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>file_extension:</highlight></codeline>
+<codeline lineno="114"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logger.info(f</highlight><highlight class="stringliteral">&quot;File<sp/>{file_path}<sp/>has<sp/>no<sp/>extension.<sp/>Skipping.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="115"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="116"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="117"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>file_extension<sp/>=<sp/>file_extension[1:]<sp/><sp/></highlight><highlight class="comment">#<sp/>Remove<sp/>the<sp/>leading<sp/>dot</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="118"><highlight class="normal"></highlight></codeline>
+<codeline lineno="119"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>file_extension<sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a0cac0310ec635aa64a34857cf30ce1eb" kindref="member">supported_file_types</ref>:</highlight></codeline>
+<codeline lineno="120"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logger.info(f</highlight><highlight class="stringliteral">&quot;File<sp/>type<sp/>{file_extension}<sp/>is<sp/>not<sp/>supported.<sp/>Skipping<sp/>{file_path}.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="121"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="122"><highlight class="normal"></highlight></codeline>
+<codeline lineno="123"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>open(file_abs_path,<sp/></highlight><highlight class="stringliteral">&apos;r&apos;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>file:</highlight></codeline>
+<codeline lineno="124"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>content<sp/>=<sp/>file.read()</highlight></codeline>
+<codeline lineno="125"><highlight class="normal"></highlight></codeline>
+<codeline lineno="126"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Get<sp/>the<sp/>diff<sp/>of<sp/>the<sp/>file<sp/>in<sp/>the<sp/>last<sp/>commit</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="127"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>last_commit<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a3a9ddfa1dfba81fe21214fe486389369" kindref="member">repo</ref>.head.commit</highlight></codeline>
+<codeline lineno="128"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>prev_commit<sp/>=<sp/>last_commit.parents[0]<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>last_commit.parents<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>last_commit</highlight></codeline>
+<codeline lineno="129"><highlight class="normal"></highlight></codeline>
+<codeline lineno="130"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Use<sp/>git<sp/>command<sp/>to<sp/>get<sp/>the<sp/>diff</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="131"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>diff_text<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a3a9ddfa1dfba81fe21214fe486389369" kindref="member">repo</ref>.git.diff(prev_commit.hexsha,<sp/>last_commit.hexsha,<sp/></highlight><highlight class="stringliteral">&apos;--&apos;</highlight><highlight class="normal">,<sp/>file_path)</highlight></codeline>
+<codeline lineno="132"><highlight class="normal"></highlight></codeline>
+<codeline lineno="133"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>diff_text:</highlight></codeline>
+<codeline lineno="134"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logger.info(f</highlight><highlight class="stringliteral">&quot;No<sp/>changes<sp/>detected<sp/>for<sp/>{file_path}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="135"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="136"><highlight class="normal"></highlight></codeline>
+<codeline lineno="137"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>modified_lines<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a974d2f51315ed6a1965a7fd7e2ced0cd" kindref="member">get_modified_lines</ref>(diff_text)</highlight></codeline>
+<codeline lineno="138"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Send<sp/>data<sp/>to<sp/>API</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="139"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>response<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a81e9c55709205aaf4ebbe2b41683baf2" kindref="member">api_client</ref>.send_file_for_docstring_generation(file_path,<sp/>content,<sp/>modified_lines,<sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a9cca3465b0cc00d78324b0a9eac1d7f5" kindref="member">repo_details</ref>)</highlight></codeline>
+<codeline lineno="140"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>response<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="141"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="142"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="143"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>response<sp/>==<sp/>content:</highlight></codeline>
+<codeline lineno="144"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logger.info(f</highlight><highlight class="stringliteral">&quot;No<sp/>changes<sp/>detected<sp/>for<sp/>{file_path}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="145"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="146"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>If<sp/>the<sp/>response<sp/>is<sp/>successful,<sp/>replace<sp/>the<sp/>file<sp/>content</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="147"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>open(file_abs_path,<sp/></highlight><highlight class="stringliteral">&apos;w&apos;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>file:</highlight></codeline>
+<codeline lineno="148"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>file.write(response)</highlight></codeline>
+<codeline lineno="149"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logger.info(f</highlight><highlight class="stringliteral">&quot;Updated<sp/>file<sp/>{file_path}<sp/>with<sp/>generated<sp/>documentation&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="150"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="151"><highlight class="normal"></highlight></codeline>
+<codeline lineno="152" refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a3beba14e92d717391a74bb70b1fab0ae" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a3beba14e92d717391a74bb70b1fab0ae" kindref="member">run</ref>(self):</highlight></codeline>
+<codeline lineno="153"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Run<sp/>the<sp/>post-commit<sp/>hook.</highlight></codeline>
+<codeline lineno="154"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="155"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>method<sp/>retrieves<sp/>the<sp/>list<sp/>of<sp/>modified<sp/>files<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>the<sp/>last<sp/>commit</highlight></codeline>
+<codeline lineno="156"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>processes<sp/>each<sp/>file.<sp/>It<sp/>stages<sp/>any<sp/>files<sp/>that<sp/>have<sp/>been<sp/>modified</highlight></codeline>
+<codeline lineno="157"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>during<sp/>processing<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>creates<sp/>an<sp/>auto-commit<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>changes<sp/>were<sp/>made.<sp/>A</highlight></codeline>
+<codeline lineno="158"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>progress<sp/>bar<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>displayed<sp/>to<sp/>indicate<sp/>the<sp/>processing<sp/>status<sp/>of<sp/>each</highlight></codeline>
+<codeline lineno="159"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>file.<sp/>The<sp/>method<sp/>handles<sp/>any<sp/>exceptions<sp/>that<sp/>occur<sp/>during<sp/>file</highlight></codeline>
+<codeline lineno="160"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>processing,<sp/>printing<sp/>an<sp/>error<sp/>message<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>each<sp/>file<sp/>that<sp/>fails<sp/>to</highlight></codeline>
+<codeline lineno="161"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>process.<sp/>If<sp/>any<sp/>modifications<sp/>are<sp/>made<sp/>to<sp/>the<sp/>files,<sp/>an<sp/>auto-commit<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="162"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>created<sp/>to<sp/>save<sp/>those<sp/>changes.</highlight></codeline>
+<codeline lineno="163"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="164"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logger.info(&quot;Starting<sp/>doc_gen_hook<sp/>processing&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="165"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" kindref="member">print_info</ref>(</highlight><highlight class="stringliteral">&quot;Starting<sp/>doc_gen_hook<sp/>processing&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="166"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="167"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>modified_files<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a17549766100e91eb94b5f1a1d34bf481" kindref="member">get_modified_files_in_last_commit</ref>()</highlight></codeline>
+<codeline lineno="168"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>changes_made<sp/>=<sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="169"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>total_files<sp/>=<sp/>len(modified_files)</highlight></codeline>
+<codeline lineno="170"><highlight class="normal"></highlight></codeline>
+<codeline lineno="171"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a12b92532b1458af94f3649d411b5505c" kindref="member">create_progress_bar</ref>(total_files,<sp/></highlight><highlight class="stringliteral">&quot;Processing<sp/>files&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;file&quot;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>pbar:</highlight></codeline>
+<codeline lineno="172"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>file<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>modified_files:</highlight></codeline>
+<codeline lineno="173"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1adfcbbfe39029ab6d1dd33e7bf75ae115" kindref="member">print_processing</ref>(file)</highlight></codeline>
+<codeline lineno="174"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logging.info(f</highlight><highlight class="stringliteral">&quot;Processing<sp/>file:<sp/>{file}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="175"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="176"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>self.<ref refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a05313caa22b173ce75638f0db08eeb85" kindref="member">process_file</ref>(file):</highlight></codeline>
+<codeline lineno="177"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Stage<sp/>the<sp/>modified<sp/>file</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="178"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a3a9ddfa1dfba81fe21214fe486389369" kindref="member">repo</ref>.git.add(file)</highlight></codeline>
+<codeline lineno="179"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>changes_made<sp/>=<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="180"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1aa6e684c00e26199440137a87ed9b195c" kindref="member">print_status</ref>(</highlight><highlight class="stringliteral">&apos;success&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;Documentation<sp/>updated&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="181"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="182"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1aa6e684c00e26199440137a87ed9b195c" kindref="member">print_status</ref>(</highlight><highlight class="stringliteral">&apos;warning&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;No<sp/>changes<sp/>needed&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="183"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>file_error:</highlight></codeline>
+<codeline lineno="184"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>error_msg<sp/>=<sp/>f</highlight><highlight class="stringliteral">&quot;Error<sp/>processing<sp/>file<sp/>[{file}]:<sp/>{file_error}&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="185"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logger.error(error_msg)</highlight></codeline>
+<codeline lineno="186"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1aa6e684c00e26199440137a87ed9b195c" kindref="member">print_status</ref>(</highlight><highlight class="stringliteral">&apos;error&apos;</highlight><highlight class="normal">,<sp/>error_msg)</highlight></codeline>
+<codeline lineno="187"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pbar.update(1)<sp/><sp/></highlight><highlight class="comment">#<sp/>Update<sp/>the<sp/>progress<sp/>bar</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="188"><highlight class="normal"></highlight></codeline>
+<codeline lineno="189"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>If<sp/>any<sp/>file<sp/>was<sp/>modified,<sp/>create<sp/>a<sp/>new<sp/>commit</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="190"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>changes_made:</highlight></codeline>
+<codeline lineno="191"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>self.repo.git.commit(&apos;-m&apos;,<sp/>&apos;Auto-commit:<sp/>Updated<sp/>files<sp/>after<sp/>doc_gen_hook<sp/>processing.&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="192"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logger.info(</highlight><highlight class="stringliteral">&quot;Auto-commit<sp/>created<sp/>with<sp/>changes.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="193"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a2b16aa6b68a9edea5f29f84f1c4be79a" kindref="member">print_success</ref>(</highlight><highlight class="stringliteral">&quot;\n✓<sp/>Auto-commit<sp/>created<sp/>with<sp/>changes&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="194"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="195"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logger.info(</highlight><highlight class="stringliteral">&quot;doc_gen_hook<sp/>complete.<sp/>No<sp/>changes<sp/>made.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="196"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" kindref="member">print_info</ref>(</highlight><highlight class="stringliteral">&quot;\n✓<sp/>doc_gen_hook<sp/>complete.<sp/>No<sp/>changes<sp/>made.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/git_analyzer.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/hook__commands_8py.xml b/docs345/xml/hook__commands_8py.xml
new file mode 100644
index 0000000..4f9c773
--- /dev/null
+++ b/docs345/xml/hook__commands_8py.xml
@@ -0,0 +1,69 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="hook__commands_8py" kind="file" language="Python">
+    <compoundname>hook_commands.py</compoundname>
+    <innernamespace refid="namespacepenify__hook">penify_hook</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1commands">penify_hook::commands</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1commands_1_1hook__commands">penify_hook::commands::hook_commands</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacepenify__hook_1_1commands_1_1hook__commands" refkind="compound"><highlight class="keyword">import</highlight><highlight class="normal"><sp/>sys</highlight></codeline>
+<codeline lineno="2"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>pathlib<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>Path</highlight></codeline>
+<codeline lineno="3"><highlight class="normal"></highlight></codeline>
+<codeline lineno="4" refid="namespacepenify__hook_1_1commands_1_1hook__commands_1ae82fd46e5a9219da1478b0476b8214b1" refkind="member"><highlight class="normal">HOOK_FILENAME<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;post-commit&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="5" refid="namespacepenify__hook_1_1commands_1_1hook__commands_1a6a45aad71c8d32ce11a6dff8cee8bee7" refkind="member"><highlight class="normal">HOOK_TEMPLATE<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;#!/bin/sh</highlight></codeline>
+<codeline lineno="6"><highlight class="stringliteral">#<sp/>This<sp/>is<sp/>a<sp/>post-commit<sp/>hook<sp/>generated<sp/>by<sp/>penify.</highlight></codeline>
+<codeline lineno="7"><highlight class="stringliteral">#<sp/>Automatically<sp/>generates<sp/>documentation<sp/>for<sp/>changed<sp/>files<sp/>after<sp/>each<sp/>commit.</highlight></codeline>
+<codeline lineno="8"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="9"><highlight class="stringliteral">penify<sp/>docgen<sp/>-gf<sp/>{git_folder_path}<sp/>-t<sp/>{token}</highlight></codeline>
+<codeline lineno="10"><highlight class="stringliteral">&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="11"><highlight class="normal"></highlight></codeline>
+<codeline lineno="12" refid="namespacepenify__hook_1_1commands_1_1hook__commands_1adff8f5d3bf1c3795974a391ee95b72b2" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1commands_1_1hook__commands_1adff8f5d3bf1c3795974a391ee95b72b2" kindref="member">install_git_hook</ref>(location,<sp/>token):</highlight></codeline>
+<codeline lineno="13"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Install<sp/>a<sp/>post-commit<sp/>hook<sp/>in<sp/>the<sp/>specified<sp/>location<sp/>that<sp/>generates</highlight></codeline>
+<codeline lineno="14"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>documentation</highlight></codeline>
+<codeline lineno="15"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>changed<sp/>files<sp/>after<sp/>each<sp/>commit.</highlight></codeline>
+<codeline lineno="16"><highlight class="normal"></highlight></codeline>
+<codeline lineno="17"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="18"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>location<sp/>(str):<sp/>The<sp/>path<sp/>to<sp/>the<sp/>Git<sp/>repository<sp/>where<sp/>the<sp/>hook<sp/>should<sp/>be<sp/>installed.</highlight></codeline>
+<codeline lineno="19"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>token<sp/>(str):<sp/>The<sp/>authentication<sp/>token<sp/>required<sp/>to<sp/>access<sp/>the<sp/>documentation<sp/>generation</highlight></codeline>
+<codeline lineno="20"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>service.</highlight></codeline>
+<codeline lineno="21"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="22"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>hooks_dir<sp/>=<sp/>Path(location)<sp/>/<sp/>&quot;.git/hooks&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="23"><highlight class="normal"><sp/><sp/><sp/><sp/>hook_path<sp/>=<sp/>hooks_dir<sp/>/<sp/>HOOK_FILENAME</highlight></codeline>
+<codeline lineno="24"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>hooks_dir.exists():</highlight></codeline>
+<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Error:<sp/>The<sp/>hooks<sp/>directory<sp/>{hooks_dir}<sp/>does<sp/>not<sp/>exist.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="27"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>sys.exit(1)</highlight></codeline>
+<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/>hook_content<sp/>=<sp/>HOOK_TEMPLATE.format(token=token,<sp/>git_folder_path=location)</highlight></codeline>
+<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/>hook_path.write_text(hook_content)</highlight></codeline>
+<codeline lineno="31"><highlight class="normal"><sp/><sp/><sp/><sp/>hook_path.chmod(0o755)<sp/><sp/></highlight><highlight class="comment">#<sp/>Make<sp/>the<sp/>hook<sp/>script<sp/>executable</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="32"><highlight class="normal"></highlight></codeline>
+<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Post-commit<sp/>hook<sp/>installed<sp/>in<sp/>{hook_path}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Documentation<sp/>will<sp/>now<sp/>be<sp/>automatically<sp/>generated<sp/>after<sp/>each<sp/>commit.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="35"><highlight class="normal"></highlight></codeline>
+<codeline lineno="36" refid="namespacepenify__hook_1_1commands_1_1hook__commands_1a81543eb5fa835fd1237f24e8bce6201d" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1commands_1_1hook__commands_1a81543eb5fa835fd1237f24e8bce6201d" kindref="member">uninstall_git_hook</ref>(location):</highlight></codeline>
+<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Uninstalls<sp/>the<sp/>post-commit<sp/>hook<sp/>from<sp/>the<sp/>specified<sp/>location.</highlight></codeline>
+<codeline lineno="38"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="39"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>attempts<sp/>to<sp/>remove<sp/>a<sp/>post-commit<sp/>git<sp/>hook<sp/>located<sp/>at<sp/>the</highlight></codeline>
+<codeline lineno="40"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>given<sp/>path.<sp/>It<sp/>constructs<sp/>the<sp/>path<sp/>to<sp/>the<sp/>hook<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>checks<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>it<sp/>exists.</highlight></codeline>
+<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/>If<sp/>the<sp/>hook<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>found,<sp/>it<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>deleted,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>a<sp/>confirmation<sp/>message<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="42"><highlight class="normal"><sp/><sp/><sp/><sp/>printed.<sp/>If<sp/>no<sp/>hook<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>found,<sp/>a<sp/>message<sp/>indicating<sp/>this<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>also<sp/>printed.</highlight></codeline>
+<codeline lineno="43"><highlight class="normal"></highlight></codeline>
+<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>location<sp/>(Path):<sp/>The<sp/>base<sp/>directory<sp/>where<sp/>the<sp/>.git/hooks<sp/>directory<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>located.</highlight></codeline>
+<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="47"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>hook_path<sp/>=<sp/>Path(location)<sp/>/<sp/>&quot;.git/hooks&quot;</highlight><highlight class="normal"><sp/>/<sp/>HOOK_FILENAME</highlight></codeline>
+<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>hook_path.exists():</highlight></codeline>
+<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>hook_path.unlink()</highlight></codeline>
+<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Post-commit<sp/>hook<sp/>uninstalled<sp/>from<sp/>{hook_path}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;No<sp/>post-commit<sp/>hook<sp/>found<sp/>in<sp/>{hook_path}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/hook_commands.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/index.xml b/docs345/xml/index.xml
new file mode 100644
index 0000000..01b2ebc
--- /dev/null
+++ b/docs345/xml/index.xml
@@ -0,0 +1,351 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygenindex xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="index.xsd" version="1.9.4" xml:lang="en-US">
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+    <member refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1aa67c06dd12b1bafaeaee81c41dcb7e25" kind="variable"><name>folder_path</name></member>
+    <member refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a957e81a1ab561f6cecfbe999e7b85499" kind="variable"><name>repo_path</name></member>
+    <member refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a3a9ddfa1dfba81fe21214fe486389369" kind="variable"><name>repo</name></member>
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+    <member refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1ab702c0c3ba81d159d7c3bcd7ea2abba4" kind="variable"><name>relative_file_path</name></member>
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+  </compound>
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+  </compound>
+  <compound refid="classException" kind="class"><name>Exception</name>
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+  <compound refid="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands" kind="page"><name>md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands</name>
+  </compound>
+  <compound refid="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows" kind="page"><name>md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows</name>
+  </compound>
+  <compound refid="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README" kind="page"><name>md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README</name>
+  </compound>
+  <compound refid="dir_624fa2a8bce97f0444ac5cca335d4e23" kind="dir"><name>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands</name>
+  </compound>
+  <compound refid="dir_1648a057408aae8db85b8e3797335623" kind="dir"><name>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs</name>
+  </compound>
+  <compound refid="dir_b3b22d2ab7966b65f6b237e3231b41be" kind="dir"><name>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli</name>
+  </compound>
+  <compound refid="dir_f88c3381c1861b3f7ca1f3d63cf244b5" kind="dir"><name>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook</name>
+  </compound>
+  <compound refid="dir_063e2d5fe58a131099a7fe4200cca78c" kind="dir"><name>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests</name>
+  </compound>
+</doxygenindex>
diff --git a/docs345/xml/index.xsd b/docs345/xml/index.xsd
new file mode 100644
index 0000000..cfb7041
--- /dev/null
+++ b/docs345/xml/index.xsd
@@ -0,0 +1,71 @@
+<?xml version='1.0' encoding='utf-8' ?>
+<xsd:schema xmlns:xsd="http://www.w3.org/2001/XMLSchema">
+  <xsd:import namespace="http://www.w3.org/XML/1998/namespace" schemaLocation="xml.xsd"/>
+
+  <xsd:element name="doxygenindex" type="DoxygenType"/>
+
+  <xsd:complexType name="DoxygenType">
+    <xsd:sequence>
+      <xsd:element name="compound" type="CompoundType" minOccurs="0" maxOccurs="unbounded"/>
+    </xsd:sequence>
+    <xsd:attribute name="version" type="xsd:string" use="required"/>
+    <xsd:attribute ref="xml:lang" use="required"/>
+  </xsd:complexType>
+
+  <xsd:complexType name="CompoundType">
+    <xsd:sequence>
+      <xsd:element name="name" type="xsd:string"/>
+      <xsd:element name="member" type="MemberType" minOccurs="0" maxOccurs="unbounded"/>
+    </xsd:sequence>
+    <xsd:attribute name="refid" type="xsd:string" use="required"/>
+    <xsd:attribute name="kind" type="CompoundKind" use="required"/>
+  </xsd:complexType>
+
+  <xsd:complexType name="MemberType">
+    <xsd:sequence>
+      <xsd:element name="name" type="xsd:string"/>
+    </xsd:sequence>
+    <xsd:attribute name="refid" type="xsd:string" use="required"/>
+    <xsd:attribute name="kind" type="MemberKind" use="required"/>
+  </xsd:complexType>
+  
+  <xsd:simpleType name="CompoundKind">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="class"/>
+      <xsd:enumeration value="struct"/>
+      <xsd:enumeration value="union"/>
+      <xsd:enumeration value="interface"/>
+      <xsd:enumeration value="protocol"/>
+      <xsd:enumeration value="category"/>
+      <xsd:enumeration value="exception"/>
+      <xsd:enumeration value="file"/>
+      <xsd:enumeration value="namespace"/>
+      <xsd:enumeration value="group"/>
+      <xsd:enumeration value="page"/>
+      <xsd:enumeration value="example"/>
+      <xsd:enumeration value="dir"/>
+      <xsd:enumeration value="type"/>
+      <xsd:enumeration value="concept"/>
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="MemberKind">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="define"/>
+      <xsd:enumeration value="property"/>
+      <xsd:enumeration value="event"/>
+      <xsd:enumeration value="variable"/>
+      <xsd:enumeration value="typedef"/>
+      <xsd:enumeration value="enum"/>
+      <xsd:enumeration value="enumvalue"/>
+      <xsd:enumeration value="function"/>
+      <xsd:enumeration value="signal"/>
+      <xsd:enumeration value="prototype"/>
+      <xsd:enumeration value="friend"/>
+      <xsd:enumeration value="dcop"/>
+      <xsd:enumeration value="slot"/>
+    </xsd:restriction>
+  </xsd:simpleType>
+
+</xsd:schema>
+
diff --git a/docs345/xml/jira__client_8py.xml b/docs345/xml/jira__client_8py.xml
new file mode 100644
index 0000000..d7cc43a
--- /dev/null
+++ b/docs345/xml/jira__client_8py.xml
@@ -0,0 +1,472 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="jira__client_8py" kind="file" language="Python">
+    <compoundname>jira_client.py</compoundname>
+    <innerclass refid="classpenify__hook_1_1jira__client_1_1JiraClient" prot="public">penify_hook::jira_client::JiraClient</innerclass>
+    <innernamespace refid="namespacepenify__hook">penify_hook</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1jira__client">penify_hook::jira_client</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacepenify__hook_1_1jira__client" refkind="compound"><highlight class="keyword">import</highlight><highlight class="normal"><sp/>re</highlight></codeline>
+<codeline lineno="2"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>logging</highlight></codeline>
+<codeline lineno="3"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>typing<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>Optional,<sp/>Dict,<sp/>List,<sp/>Any</highlight></codeline>
+<codeline lineno="4"><highlight class="normal"></highlight></codeline>
+<codeline lineno="5"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1ui__utils" kindref="compound">penify_hook.ui_utils</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>print_info,<sp/>print_success</highlight></codeline>
+<codeline lineno="6"><highlight class="normal"></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="7"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>jira<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>JIRA</highlight></codeline>
+<codeline lineno="8" refid="namespacepenify__hook_1_1jira__client_1a5593ea3415081eca1eea92e4c1ad1aa2" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>JIRA_AVAILABLE<sp/>=<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="9"><highlight class="normal"></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>ImportError:</highlight></codeline>
+<codeline lineno="10"><highlight class="normal"><sp/><sp/><sp/><sp/>JIRA_AVAILABLE<sp/>=<sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="11"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="12" refid="classpenify__hook_1_1jira__client_1_1JiraClient" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1jira__client_1_1JiraClient" kindref="compound">JiraClient</ref>:</highlight></codeline>
+<codeline lineno="13"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="14"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>Client<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>interacting<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>JIRA<sp/>API</highlight></codeline>
+<codeline lineno="15"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="16"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="17" refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a47efc1ec07389c960f2dfb37ba8c09f5" refkind="member"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a47efc1ec07389c960f2dfb37ba8c09f5" kindref="member">__init__</ref>(self,<sp/>jira_url:<sp/>str<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">,<sp/>jira_user:<sp/>str<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">,<sp/>jira_api_token:<sp/>str<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">):</highlight></codeline>
+<codeline lineno="18"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="19"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Initialize<sp/>the<sp/>JIRA<sp/>client.</highlight></codeline>
+<codeline lineno="20"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="21"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="22"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_url:<sp/>Base<sp/>URL<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>JIRA<sp/>instance<sp/>(e.g.,<sp/></highlight><highlight class="stringliteral">&quot;https://your-domain.atlassian.net&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="23"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_user:<sp/>JIRA<sp/>username<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/>email</highlight></codeline>
+<codeline lineno="24"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_api_token:<sp/>JIRA<sp/>API<sp/>token</highlight></codeline>
+<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="26" refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a3c0cfecff02a75cb7001509a595b8197" refkind="member"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a3c0cfecff02a75cb7001509a595b8197" kindref="member">jira_url</ref><sp/>=<sp/>jira_url</highlight></codeline>
+<codeline lineno="27" refid="classpenify__hook_1_1jira__client_1_1JiraClient_1ae56104d5aa7bda7bb26d169c4b46038c" refkind="member"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1ae56104d5aa7bda7bb26d169c4b46038c" kindref="member">jira_user</ref><sp/>=<sp/>jira_user</highlight></codeline>
+<codeline lineno="28" refid="classpenify__hook_1_1jira__client_1_1JiraClient_1afc5c90e53b702f9fc27e2ee7d3f991b9" refkind="member"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1afc5c90e53b702f9fc27e2ee7d3f991b9" kindref="member">jira_api_token</ref><sp/>=<sp/>jira_api_token</highlight></codeline>
+<codeline lineno="29" refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6" refkind="member"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6" kindref="member">jira_client</ref><sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="31"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>JIRA_AVAILABLE:</highlight></codeline>
+<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logging.warning(</highlight><highlight class="stringliteral">&quot;JIRA<sp/>package<sp/>not<sp/>available.<sp/>JIRA<sp/>integration<sp/>will<sp/>not<sp/>work.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>jira_url<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>jira_user<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>jira_api_token:</highlight></codeline>
+<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6" kindref="member">jira_client</ref><sp/>=<sp/>JIRA(</highlight></codeline>
+<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>server=jira_url,</highlight></codeline>
+<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>basic_auth=(jira_user,<sp/>jira_api_token)</highlight></codeline>
+<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>)</highlight></codeline>
+<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logging.info(</highlight><highlight class="stringliteral">&quot;JIRA<sp/>client<sp/>initialized<sp/>successfully&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="42"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logging.error(f</highlight><highlight class="stringliteral">&quot;Failed<sp/>to<sp/>initialize<sp/>JIRA<sp/>client:<sp/>{e}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6" kindref="member">jira_client</ref><sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="46" refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a00d0f9ae006313a21576362d26ac5ec8" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a00d0f9ae006313a21576362d26ac5ec8" kindref="member">is_connected</ref>(self)<sp/>-&gt;<sp/>bool:</highlight></codeline>
+<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Check<sp/>if<sp/>the<sp/>JIRA<sp/>client<sp/>is<sp/>connected.</highlight></codeline>
+<codeline lineno="48"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="49"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>verifies<sp/>whether<sp/>the<sp/>JIRA<sp/>client<sp/>has<sp/>successfully</highlight></codeline>
+<codeline lineno="50"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>established<sp/>a<sp/>connection.<sp/>It<sp/>returns<sp/>`</highlight><highlight class="keyword">True</highlight><highlight class="normal">`<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>the<sp/>client<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>connected,</highlight></codeline>
+<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>`</highlight><highlight class="keyword">False</highlight><highlight class="normal">`<sp/>otherwise.</highlight></codeline>
+<codeline lineno="52"><highlight class="normal"></highlight></codeline>
+<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>bool:<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>the<sp/>JIRA<sp/>client<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>connected,<sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"><sp/>otherwise</highlight></codeline>
+<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="56"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6" kindref="member">jira_client</ref><sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="58" refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a093d6456fe053ef7a7862d5d6851910c" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a093d6456fe053ef7a7862d5d6851910c" kindref="member">extract_issue_keys_from_branch</ref>(self,<sp/>branch_name:<sp/>str)<sp/>-&gt;<sp/>List[str]:</highlight></codeline>
+<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Extracts<sp/>JIRA<sp/>issue<sp/>keys<sp/>from<sp/>a<sp/>branch<sp/>name.</highlight></codeline>
+<codeline lineno="60"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="61"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>searches<sp/>through<sp/>a<sp/>given<sp/>git<sp/>branch<sp/>name<sp/>to<sp/>find<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>any<sp/>JIRA<sp/>issue<sp/>keys<sp/>that<sp/>match<sp/>the<sp/>pattern.<sp/>Common<sp/>conventions</highlight></codeline>
+<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>JIRA<sp/>issue<sp/>keys<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>branch<sp/>names<sp/>include:<sp/>-</highlight></codeline>
+<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>feature/PROJECT-123-description<sp/>-<sp/>bugfix/PROJECT-123-fix-something<sp/>-</highlight></codeline>
+<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>hotfix/PROJECT-123/short-desc</highlight></codeline>
+<codeline lineno="66"><highlight class="normal"></highlight></codeline>
+<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>branch_name<sp/>(str):<sp/>The<sp/>name<sp/>of<sp/>the<sp/>git<sp/>branch<sp/>to<sp/>search<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>JIRA<sp/>issue<sp/>keys.</highlight></codeline>
+<codeline lineno="69"><highlight class="normal"></highlight></codeline>
+<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>List[str]:<sp/>A<sp/>list<sp/>of<sp/>unique<sp/>JIRA<sp/>issue<sp/>keys<sp/>found<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the<sp/>branch<sp/>name.</highlight></codeline>
+<codeline lineno="72"><highlight class="normal"></highlight></codeline>
+<codeline lineno="73"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Examples:</highlight></codeline>
+<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a093d6456fe053ef7a7862d5d6851910c" kindref="member">extract_issue_keys_from_branch</ref>(</highlight><highlight class="stringliteral">&quot;feature/PROJ-456-add-new-feature&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Output:<sp/>[&apos;PROJ-456&apos;]</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="77"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Common<sp/>JIRA<sp/>issue<sp/>key<sp/>pattern:<sp/>PROJECT-123</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="78"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pattern<sp/>=<sp/></highlight><highlight class="stringliteral">r&apos;[A-Z][A-Z0-9_]+-[0-9]+&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>matches<sp/>=<sp/>re.findall(pattern,<sp/>branch_name)</highlight></codeline>
+<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>matches:</highlight></codeline>
+<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" kindref="member">print_info</ref>(f</highlight><highlight class="stringliteral">&quot;Fetching<sp/>relevant<sp/>JIRA<sp/>issues&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>list(set(matches))<sp/><sp/></highlight><highlight class="comment">#<sp/>Remove<sp/>duplicates</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="84" refid="classpenify__hook_1_1jira__client_1_1JiraClient_1ad2823ad1d3baaedd38039913c3a97fd7" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1ad2823ad1d3baaedd38039913c3a97fd7" kindref="member">extract_issue_keys</ref>(self,<sp/>text:<sp/>str)<sp/>-&gt;<sp/>List[str]:</highlight></codeline>
+<codeline lineno="85"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Extract<sp/>JIRA<sp/>issue<sp/>keys<sp/>from<sp/>a<sp/>given<sp/>text.</highlight></codeline>
+<codeline lineno="86"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="87"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>searches<sp/>through<sp/>the<sp/>provided<sp/>text<sp/>to<sp/>find<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>all</highlight></codeline>
+<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>unique<sp/>JIRA<sp/>issue<sp/>keys.<sp/>A<sp/>JIRA<sp/>issue<sp/>key<sp/>typically<sp/>follows<sp/>the<sp/>pattern</highlight></codeline>
+<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>of<sp/>PROJECT-123,<sp/>where<sp/>PROJECT<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>alphanumeric<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>consists<sp/>of<sp/>at<sp/>least</highlight></codeline>
+<codeline lineno="90"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>one<sp/>uppercase<sp/>letter<sp/>followed<sp/>by<sp/>one<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/>more<sp/>alphanumeric<sp/>characters,</highlight></codeline>
+<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>123<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>a<sp/>numeric<sp/>sequence.</highlight></codeline>
+<codeline lineno="92"><highlight class="normal"></highlight></codeline>
+<codeline lineno="93"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="94"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>text<sp/>(str):<sp/>The<sp/>text<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>which<sp/>to<sp/>search<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>JIRA<sp/>issue<sp/>keys.</highlight></codeline>
+<codeline lineno="95"><highlight class="normal"></highlight></codeline>
+<codeline lineno="96"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="97"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>List[str]:<sp/>A<sp/>list<sp/>of<sp/>unique<sp/>JIRA<sp/>issue<sp/>keys<sp/>found<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the<sp/>text.</highlight></codeline>
+<codeline lineno="98"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="99"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Common<sp/>JIRA<sp/>issue<sp/>key<sp/>pattern:<sp/>PROJECT-123</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="100"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pattern<sp/>=<sp/></highlight><highlight class="stringliteral">r&apos;[A-Z][A-Z0-9_]+-[0-9]+&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="101"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>matches<sp/>=<sp/>re.findall(pattern,<sp/>text)</highlight></codeline>
+<codeline lineno="102"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>list(set(matches))<sp/><sp/></highlight><highlight class="comment">#<sp/>Remove<sp/>duplicates</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="103"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="104" refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a65f6924819084b7c8d268956a784804a" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a65f6924819084b7c8d268956a784804a" kindref="member">get_issue_details</ref>(self,<sp/>issue_key:<sp/>str)<sp/>-&gt;<sp/>Optional[Dict[str,<sp/>Any]]:</highlight></codeline>
+<codeline lineno="105"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Retrieve<sp/>details<sp/>of<sp/>a<sp/>JIRA<sp/>issue<sp/>based<sp/>on<sp/>its<sp/>key.</highlight></codeline>
+<codeline lineno="106"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="107"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>fetches<sp/>detailed<sp/>information<sp/>about<sp/>a<sp/>specified<sp/>JIRA<sp/>issue</highlight></codeline>
+<codeline lineno="108"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>using<sp/>the<sp/>provided<sp/>issue<sp/>key.<sp/>It<sp/>checks<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>the<sp/>JIRA<sp/>client<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>connected</highlight></codeline>
+<codeline lineno="109"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>before<sp/>attempting<sp/>to<sp/>retrieve<sp/>the<sp/>issue.<sp/>If<sp/>the<sp/>client<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>connected,</highlight></codeline>
+<codeline lineno="110"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>it<sp/>logs<sp/>a<sp/>warning<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>returns<sp/>`</highlight><highlight class="keywordtype">None</highlight><highlight class="normal">`.<sp/>The<sp/>function<sp/>then<sp/>attempts<sp/>to</highlight></codeline>
+<codeline lineno="111"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>fetch<sp/>the<sp/>issue<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>the<sp/>JIRA<sp/>server<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>constructs<sp/>a<sp/>dictionary</highlight></codeline>
+<codeline lineno="112"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>containing<sp/>various<sp/>details<sp/>about<sp/>the<sp/>issue<sp/>such<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>its<sp/>key,<sp/>summary,</highlight></codeline>
+<codeline lineno="113"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>status,<sp/>description,<sp/>assignee,<sp/>reporter,<sp/>type,<sp/>priority,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>URL.<sp/>If<sp/>any</highlight></codeline>
+<codeline lineno="114"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>errors<sp/>occur<sp/>during<sp/>this<sp/>process,<sp/>they<sp/>are<sp/>logged,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>`</highlight><highlight class="keywordtype">None</highlight><highlight class="normal">`<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="115"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>returned.</highlight></codeline>
+<codeline lineno="116"><highlight class="normal"></highlight></codeline>
+<codeline lineno="117"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="118"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>issue_key<sp/>(str):<sp/>The<sp/>JIRA<sp/>issue<sp/>key<sp/>(e.g.,<sp/></highlight><highlight class="stringliteral">&quot;PROJECT-123&quot;</highlight><highlight class="normal">).</highlight></codeline>
+<codeline lineno="119"><highlight class="normal"></highlight></codeline>
+<codeline lineno="120"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="121"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Dict[str,<sp/>Any]<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">:<sp/>A<sp/>dictionary<sp/>containing<sp/>the<sp/>details<sp/>of<sp/>the<sp/>JIRA</highlight></codeline>
+<codeline lineno="122"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>issue<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>found,<sp/>otherwise<sp/>`</highlight><highlight class="keywordtype">None</highlight><highlight class="normal">`.</highlight></codeline>
+<codeline lineno="123"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="124"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a00d0f9ae006313a21576362d26ac5ec8" kindref="member">is_connected</ref>():</highlight></codeline>
+<codeline lineno="125"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logging.warning(</highlight><highlight class="stringliteral">&quot;JIRA<sp/>client<sp/>not<sp/>connected&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="126"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="127"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="128"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="129"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>issue<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6" kindref="member">jira_client</ref>.issue(issue_key)</highlight></codeline>
+<codeline lineno="130"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>{</highlight></codeline>
+<codeline lineno="131"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;key&apos;</highlight><highlight class="normal">:<sp/>issue.key,</highlight></codeline>
+<codeline lineno="132"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;summary&apos;</highlight><highlight class="normal">:<sp/>issue.fields.summary,</highlight></codeline>
+<codeline lineno="133"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;status&apos;</highlight><highlight class="normal">:<sp/>issue.fields.status.name,</highlight></codeline>
+<codeline lineno="134"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;description&apos;</highlight><highlight class="normal">:<sp/>issue.fields.description,</highlight></codeline>
+<codeline lineno="135"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;assignee&apos;</highlight><highlight class="normal">:<sp/>issue.fields.assignee.displayName<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>issue.fields.assignee<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="136"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;reporter&apos;</highlight><highlight class="normal">:<sp/>issue.fields.reporter.displayName<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>issue.fields.reporter<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="137"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;type&apos;</highlight><highlight class="normal">:<sp/>issue.fields.issuetype.name,</highlight></codeline>
+<codeline lineno="138"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;priority&apos;</highlight><highlight class="normal">:<sp/>issue.fields.priority.name<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>hasattr(issue.fields,<sp/></highlight><highlight class="stringliteral">&apos;priority&apos;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>issue.fields.priority<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="139"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;url&apos;</highlight><highlight class="normal">:<sp/>f</highlight><highlight class="stringliteral">&quot;{self.jira_url}/browse/{issue.key}&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="140"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="141"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="142"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logging.error(f</highlight><highlight class="stringliteral">&quot;Error<sp/>fetching<sp/>issue<sp/>{issue_key}:<sp/>{e}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="143"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="144"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="145" refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aa1f374116c64cd5f1492ec7f7e40f9c1" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aa1f374116c64cd5f1492ec7f7e40f9c1" kindref="member">add_comment</ref>(self,<sp/>issue_key:<sp/>str,<sp/>comment:<sp/>str)<sp/>-&gt;<sp/>bool:</highlight></codeline>
+<codeline lineno="146"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Add<sp/>a<sp/>comment<sp/>to<sp/>a<sp/>JIRA<sp/>issue.</highlight></codeline>
+<codeline lineno="147"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="148"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="149"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>issue_key<sp/>(str):<sp/>JIRA<sp/>issue<sp/>key<sp/>(e.g.,<sp/>&quot;PROJECT-123&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="150"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>comment<sp/>(str):<sp/>Comment<sp/>text<sp/>to<sp/>add</highlight></codeline>
+<codeline lineno="151"><highlight class="normal"></highlight></codeline>
+<codeline lineno="152"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="153"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>bool:<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>the<sp/>comment<sp/>was<sp/>added<sp/>successfully,<sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"><sp/>otherwise</highlight></codeline>
+<codeline lineno="154"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="155"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a00d0f9ae006313a21576362d26ac5ec8" kindref="member">is_connected</ref>():</highlight></codeline>
+<codeline lineno="156"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logging.warning(</highlight><highlight class="stringliteral">&quot;JIRA<sp/>client<sp/>not<sp/>connected&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="157"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="158"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="159"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="160"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6" kindref="member">jira_client</ref>.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aa1f374116c64cd5f1492ec7f7e40f9c1" kindref="member">add_comment</ref>(issue_key,<sp/>comment)</highlight></codeline>
+<codeline lineno="161"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logging.info(f</highlight><highlight class="stringliteral">&quot;Comment<sp/>added<sp/>to<sp/>{issue_key}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="162"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="163"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="164"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logging.error(f</highlight><highlight class="stringliteral">&quot;Error<sp/>adding<sp/>comment<sp/>to<sp/>{issue_key}:<sp/>{e}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="165"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="166"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="167" refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aca8837552d37bfd611de23441a240826" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aca8837552d37bfd611de23441a240826" kindref="member">update_issue_status</ref>(self,<sp/>issue_key:<sp/>str,<sp/>transition_name:<sp/>str)<sp/>-&gt;<sp/>bool:</highlight></codeline>
+<codeline lineno="168"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Update<sp/>the<sp/>status<sp/>of<sp/>a<sp/>JIRA<sp/>issue.</highlight></codeline>
+<codeline lineno="169"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="170"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="171"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>issue_key<sp/>(str):<sp/>The<sp/>key<sp/>of<sp/>the<sp/>JIRA<sp/>issue<sp/>to<sp/>be<sp/>updated.</highlight></codeline>
+<codeline lineno="172"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>transition_name<sp/>(str):<sp/>The<sp/>name<sp/>of<sp/>the<sp/>desired<sp/>transition.</highlight></codeline>
+<codeline lineno="173"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="174"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="175"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>bool:<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>the<sp/>status<sp/>was<sp/>successfully<sp/>updated,<sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"><sp/>otherwise.</highlight></codeline>
+<codeline lineno="176"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="177"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a00d0f9ae006313a21576362d26ac5ec8" kindref="member">is_connected</ref>():</highlight></codeline>
+<codeline lineno="178"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logging.warning(</highlight><highlight class="stringliteral">&quot;JIRA<sp/>client<sp/>not<sp/>connected&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="179"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="180"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="181"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="182"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Get<sp/>available<sp/>transitions</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="183"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>transitions<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6" kindref="member">jira_client</ref>.transitions(issue_key)</highlight></codeline>
+<codeline lineno="184"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="185"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Find<sp/>the<sp/>transition<sp/>ID<sp/>based<sp/>on<sp/>name</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="186"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>transition_id<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="187"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>t<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>transitions:</highlight></codeline>
+<codeline lineno="188"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>t[</highlight><highlight class="stringliteral">&apos;name&apos;</highlight><highlight class="normal">].lower()<sp/>==<sp/>transition_name.lower():</highlight></codeline>
+<codeline lineno="189"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>transition_id<sp/>=<sp/>t[</highlight><highlight class="stringliteral">&apos;id&apos;</highlight><highlight class="normal">]</highlight></codeline>
+<codeline lineno="190"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">break</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="191"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="192"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>transition_id:</highlight></codeline>
+<codeline lineno="193"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6" kindref="member">jira_client</ref>.transition_issue(issue_key,<sp/>transition_id)</highlight></codeline>
+<codeline lineno="194"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logging.info(f</highlight><highlight class="stringliteral">&quot;Updated<sp/>{issue_key}<sp/>status<sp/>to<sp/>{transition_name}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="195"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="196"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="197"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logging.warning(f</highlight><highlight class="stringliteral">&quot;Transition<sp/>&apos;{transition_name}&apos;<sp/>not<sp/>found<sp/>for<sp/>{issue_key}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="198"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="199"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="200"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="201"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logging.error(f</highlight><highlight class="stringliteral">&quot;Error<sp/>updating<sp/>status<sp/>for<sp/>{issue_key}:<sp/>{e}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="202"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="203"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="204" refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a49ea1149758f7f5212149d357b13cc23" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a49ea1149758f7f5212149d357b13cc23" kindref="member">format_commit_message_with_jira_info</ref>(self,<sp/>commit_title:<sp/>str,<sp/>commit_description:<sp/>str,<sp/>issue_keys:<sp/>List[str]<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">)<sp/>-&gt;<sp/>tuple:</highlight></codeline>
+<codeline lineno="205"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Format<sp/>commit<sp/>message<sp/>with<sp/>JIRA<sp/>issue<sp/>information.</highlight></codeline>
+<codeline lineno="206"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="207"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="208"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>commit_title<sp/>(str):<sp/>The<sp/>original<sp/>commit<sp/>title.</highlight></codeline>
+<codeline lineno="209"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>commit_description<sp/>(str):<sp/>The<sp/>original<sp/>commit<sp/>description.</highlight></codeline>
+<codeline lineno="210"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>issue_keys<sp/>(List[str]?):<sp/>A<sp/>list<sp/>of<sp/>JIRA<sp/>issue<sp/>keys<sp/>to<sp/>include<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the<sp/>commit<sp/>message.<sp/>If<sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="211"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>provided,<sp/>issue<sp/>keys<sp/>will<sp/>be<sp/>extracted<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>both<sp/>the<sp/>title<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>the</highlight></codeline>
+<codeline lineno="212"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>description.</highlight></codeline>
+<codeline lineno="213"><highlight class="normal"></highlight></codeline>
+<codeline lineno="214"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="215"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>tuple:<sp/>A<sp/>tuple<sp/>containing<sp/>the<sp/>updated<sp/>commit<sp/>title<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>description<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>JIRA</highlight></codeline>
+<codeline lineno="216"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>information<sp/>included.</highlight></codeline>
+<codeline lineno="217"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="218"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>If<sp/>no<sp/>issue<sp/>keys<sp/>provided,<sp/>extract<sp/>them<sp/>from<sp/>title<sp/>and<sp/>description</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="219"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>issue_keys:</highlight></codeline>
+<codeline lineno="220"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>title_keys<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1ad2823ad1d3baaedd38039913c3a97fd7" kindref="member">extract_issue_keys</ref>(commit_title)</highlight></codeline>
+<codeline lineno="221"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>desc_keys<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1ad2823ad1d3baaedd38039913c3a97fd7" kindref="member">extract_issue_keys</ref>(commit_description)</highlight></codeline>
+<codeline lineno="222"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>issue_keys<sp/>=<sp/>list(set(title_keys<sp/>+<sp/>desc_keys))</highlight></codeline>
+<codeline lineno="223"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="224"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>issue_keys<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a00d0f9ae006313a21576362d26ac5ec8" kindref="member">is_connected</ref>():</highlight></codeline>
+<codeline lineno="225"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>commit_title,<sp/>commit_description</highlight></codeline>
+<codeline lineno="226"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="227"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Format<sp/>the<sp/>title<sp/>to<sp/>include<sp/>the<sp/>issue<sp/>key<sp/>if<sp/>not<sp/>already<sp/>there</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="228"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>updated_title<sp/>=<sp/>commit_title</highlight></codeline>
+<codeline lineno="229"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>issue_keys<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>any(key<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>commit_title<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>key<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>issue_keys):</highlight></codeline>
+<codeline lineno="230"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Add<sp/>the<sp/>first<sp/>issue<sp/>key<sp/>to<sp/>the<sp/>title</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="231"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>updated_title<sp/>=<sp/>f</highlight><highlight class="stringliteral">&quot;{issue_keys[0]}:<sp/>{commit_title}&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="232"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="233"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Add<sp/>issue<sp/>details<sp/>to<sp/>the<sp/>description</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="234"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>updated_description<sp/>=<sp/>commit_description</highlight></codeline>
+<codeline lineno="235"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="236"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>issue_details_section<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;\n\n##<sp/>Related<sp/>JIRA<sp/>Issues\n\n&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="237"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>has_issue_details<sp/>=<sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="238"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="239"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>issue_key<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>issue_keys:</highlight></codeline>
+<codeline lineno="240"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>details<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a65f6924819084b7c8d268956a784804a" kindref="member">get_issue_details</ref>(issue_key)</highlight></codeline>
+<codeline lineno="241"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>details:</highlight></codeline>
+<codeline lineno="242"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>has_issue_details<sp/>=<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="243"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>issue_details_section<sp/>+=<sp/>(</highlight></codeline>
+<codeline lineno="244"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>f</highlight><highlight class="stringliteral">&quot;*<sp/>**[{details[&apos;key&apos;]}]({details[&apos;url&apos;]})**:<sp/>{details[&apos;summary&apos;]}\n&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="245"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>f</highlight><highlight class="stringliteral">&quot;<sp/><sp/>*<sp/>Status:<sp/>{details[&apos;status&apos;]}\n&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="246"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>f</highlight><highlight class="stringliteral">&quot;<sp/><sp/>*<sp/>Type:<sp/>{details[&apos;type&apos;]}\n&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="247"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>)</highlight></codeline>
+<codeline lineno="248"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="249"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>has_issue_details:</highlight></codeline>
+<codeline lineno="250"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>updated_description<sp/>+=<sp/>issue_details_section</highlight></codeline>
+<codeline lineno="251"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="252"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>updated_title,<sp/>updated_description</highlight></codeline>
+<codeline lineno="253"><highlight class="normal"></highlight></codeline>
+<codeline lineno="254" refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aa967169a4b7970c67c0947b9ac56f746" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aa967169a4b7970c67c0947b9ac56f746" kindref="member">get_detailed_issue_context</ref>(self,<sp/>issue_key:<sp/>str)<sp/>-&gt;<sp/>Dict[str,<sp/>Any]:</highlight></codeline>
+<codeline lineno="255"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Retrieve<sp/>comprehensive<sp/>details<sp/>about<sp/>a<sp/>JIRA<sp/>issue<sp/>including<sp/>context<sp/>for</highlight></codeline>
+<codeline lineno="256"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>better<sp/>commit<sp/>messages.</highlight></codeline>
+<codeline lineno="257"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="258"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>fetches<sp/>detailed<sp/>information<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>a<sp/>specified<sp/>JIRA<sp/>issue</highlight></codeline>
+<codeline lineno="259"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>constructs<sp/>a<sp/>dictionary<sp/>containing<sp/>various<sp/>context<sp/>fields<sp/>such<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="260"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>the<sp/>issue<sp/>summary,<sp/>description,<sp/>type,<sp/>status,<sp/>priority,<sp/>comments,<sp/>URL,</highlight></codeline>
+<codeline lineno="261"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>additional<sp/>custom<sp/>fields<sp/>like<sp/>acceptance<sp/>criteria<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>sprint</highlight></codeline>
+<codeline lineno="262"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>information.<sp/>If<sp/>any<sp/>errors<sp/>occur<sp/>during<sp/>the<sp/>fetching<sp/>process,</highlight></codeline>
+<codeline lineno="263"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>appropriate<sp/>warnings<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/>errors<sp/>are<sp/>logged.</highlight></codeline>
+<codeline lineno="264"><highlight class="normal"></highlight></codeline>
+<codeline lineno="265"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="266"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>issue_key<sp/>(str):<sp/>The<sp/>JIRA<sp/>issue<sp/>key<sp/>(e.g.,<sp/></highlight><highlight class="stringliteral">&quot;PROJECT-123&quot;</highlight><highlight class="normal">).</highlight></codeline>
+<codeline lineno="267"><highlight class="normal"></highlight></codeline>
+<codeline lineno="268"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="269"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Dict[str,<sp/>Any]:<sp/>A<sp/>dictionary<sp/>containing<sp/>business<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>technical<sp/>context<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>the<sp/>issue.</highlight></codeline>
+<codeline lineno="270"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="271"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a00d0f9ae006313a21576362d26ac5ec8" kindref="member">is_connected</ref>():</highlight></codeline>
+<codeline lineno="272"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logging.warning(</highlight><highlight class="stringliteral">&quot;JIRA<sp/>client<sp/>not<sp/>connected&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="273"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>{}</highlight></codeline>
+<codeline lineno="274"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="275"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="276"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>issue<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6" kindref="member">jira_client</ref>.issue(issue_key)</highlight></codeline>
+<codeline lineno="277"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="278"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Get<sp/>issue<sp/>history<sp/>and<sp/>comments<sp/>for<sp/>context</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="279"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>comments<sp/>=<sp/>[]</highlight></codeline>
+<codeline lineno="280"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="281"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>comment<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6" kindref="member">jira_client</ref>.comments(issue):</highlight></codeline>
+<codeline lineno="282"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>comments.append(comment.body)</highlight></codeline>
+<codeline lineno="283"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="284"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logging.warning(f</highlight><highlight class="stringliteral">&quot;Could<sp/>not<sp/>fetch<sp/>comments<sp/>for<sp/>{issue_key}:<sp/>{e}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="285"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="286"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Build<sp/>a<sp/>comprehensive<sp/>context<sp/>object</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="287"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>context<sp/>=<sp/>{</highlight></codeline>
+<codeline lineno="288"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;key&apos;</highlight><highlight class="normal">:<sp/>issue.key,</highlight></codeline>
+<codeline lineno="289"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;summary&apos;</highlight><highlight class="normal">:<sp/>issue.fields.summary,</highlight></codeline>
+<codeline lineno="290"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;description&apos;</highlight><highlight class="normal">:<sp/>issue.fields.description<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&quot;&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="291"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;type&apos;</highlight><highlight class="normal">:<sp/>issue.fields.issuetype.name,</highlight></codeline>
+<codeline lineno="292"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;status&apos;</highlight><highlight class="normal">:<sp/>issue.fields.status.name,</highlight></codeline>
+<codeline lineno="293"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;priority&apos;</highlight><highlight class="normal">:<sp/>issue.fields.priority.name<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>hasattr(issue.fields,<sp/></highlight><highlight class="stringliteral">&apos;priority&apos;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>issue.fields.priority<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&quot;None&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="294"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;comments&apos;</highlight><highlight class="normal">:<sp/>comments[:3],<sp/><sp/></highlight><highlight class="comment">#<sp/>Limit<sp/>to<sp/>latest<sp/>3<sp/>comments</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="295"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;url&apos;</highlight><highlight class="normal">:<sp/>f</highlight><highlight class="stringliteral">&quot;{self.jira_url}/browse/{issue.key}&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="296"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="297"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="298"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Add<sp/>acceptance<sp/>criteria<sp/>if<sp/>available<sp/>(common<sp/>custom<sp/>fields)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="299"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Field<sp/>names<sp/>may<sp/>vary<sp/>by<sp/>JIRA<sp/>instance</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="300"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>acceptance_criteria<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="301"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="302"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>field_name<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>[</highlight><highlight class="stringliteral">&apos;customfield_10001&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;acceptance_criteria&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;customfield_10207&apos;</highlight><highlight class="normal">]:</highlight></codeline>
+<codeline lineno="303"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>hasattr(issue.fields,<sp/>field_name):</highlight></codeline>
+<codeline lineno="304"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>field_value<sp/>=<sp/>getattr(issue.fields,<sp/>field_name)</highlight></codeline>
+<codeline lineno="305"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>field_value:</highlight></codeline>
+<codeline lineno="306"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>acceptance_criteria<sp/>=<sp/>field_value</highlight></codeline>
+<codeline lineno="307"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">break</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="308"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception:</highlight></codeline>
+<codeline lineno="309"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">pass</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="310"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="311"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>acceptance_criteria:</highlight></codeline>
+<codeline lineno="312"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>context[</highlight><highlight class="stringliteral">&apos;acceptance_criteria&apos;</highlight><highlight class="normal">]<sp/>=<sp/>acceptance_criteria</highlight></codeline>
+<codeline lineno="313"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="314"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Try<sp/>to<sp/>extract<sp/>sprint<sp/>information</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="315"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="316"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>sprint_field<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="317"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>field_name<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>dir(issue.fields):</highlight></codeline>
+<codeline lineno="318"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;sprint&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>field_name.lower():</highlight></codeline>
+<codeline lineno="319"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>sprint_field<sp/>=<sp/>field_name</highlight></codeline>
+<codeline lineno="320"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">break</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="321"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="322"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>sprint_field:</highlight></codeline>
+<codeline lineno="323"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>sprint_value<sp/>=<sp/>getattr(issue.fields,<sp/>sprint_field)</highlight></codeline>
+<codeline lineno="324"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>sprint_value:</highlight></codeline>
+<codeline lineno="325"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>isinstance(sprint_value,<sp/>list)<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>len(sprint_value)<sp/>&gt;<sp/>0:</highlight></codeline>
+<codeline lineno="326"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>context[</highlight><highlight class="stringliteral">&apos;sprint&apos;</highlight><highlight class="normal">]<sp/>=<sp/>sprint_value[0]</highlight></codeline>
+<codeline lineno="327"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="328"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>context[</highlight><highlight class="stringliteral">&apos;sprint&apos;</highlight><highlight class="normal">]<sp/>=<sp/>str(sprint_value)</highlight></codeline>
+<codeline lineno="329"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="330"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logging.debug(f</highlight><highlight class="stringliteral">&quot;Could<sp/>not<sp/>extract<sp/>sprint<sp/>information:<sp/>{e}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="331"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="332"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>context</highlight></codeline>
+<codeline lineno="333"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="334"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="335"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logging.error(f</highlight><highlight class="stringliteral">&quot;Error<sp/>fetching<sp/>detailed<sp/>information<sp/>for<sp/>{issue_key}:<sp/>{e}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="336"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>{}</highlight></codeline>
+<codeline lineno="337"><highlight class="normal"></highlight></codeline>
+<codeline lineno="338" refid="classpenify__hook_1_1jira__client_1_1JiraClient_1afb41ce6f13c30b1265d439ddf04bf2cd" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1afb41ce6f13c30b1265d439ddf04bf2cd" kindref="member">get_commit_context_from_issues</ref>(self,<sp/>issue_keys:<sp/>List[str])<sp/>-&gt;<sp/>Dict[str,<sp/>Any]:</highlight></codeline>
+<codeline lineno="339"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Gather<sp/>contextual<sp/>information<sp/>from<sp/>JIRA<sp/>issues<sp/>to<sp/>improve<sp/>commit</highlight></codeline>
+<codeline lineno="340"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>messages.</highlight></codeline>
+<codeline lineno="341"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="342"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>processes<sp/>a<sp/>list<sp/>of<sp/>JIRA<sp/>issue<sp/>keys,<sp/>retrieves<sp/>detailed</highlight></codeline>
+<codeline lineno="343"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>context<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>each<sp/>issue,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>aggregates<sp/>it<sp/>into<sp/>a<sp/>dictionary<sp/>that<sp/>can<sp/>be</highlight></codeline>
+<codeline lineno="344"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>used<sp/>to<sp/>enhance<sp/>commit<sp/>messages.<sp/>It<sp/>first<sp/>retrieves<sp/>the<sp/>primary<sp/>issue</highlight></codeline>
+<codeline lineno="345"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>(the<sp/>first<sp/>key<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the<sp/>list)<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>then<sp/>gathers<sp/>basic<sp/>details<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>any</highlight></codeline>
+<codeline lineno="346"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>related<sp/>issues.<sp/>The<sp/>resulting<sp/>context<sp/>includes<sp/>information<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>both<sp/>the</highlight></codeline>
+<codeline lineno="347"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>primary<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>related<sp/>issues,<sp/>along<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>all<sp/>issue<sp/>keys.</highlight></codeline>
+<codeline lineno="348"><highlight class="normal"></highlight></codeline>
+<codeline lineno="349"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="350"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>issue_keys:<sp/>List<sp/>of<sp/>JIRA<sp/>issue<sp/>keys<sp/>to<sp/>gather<sp/>information<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="351"><highlight class="normal"></highlight></codeline>
+<codeline lineno="352"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="353"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Dict<sp/>containing<sp/>business<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>technical<sp/>context<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>the<sp/>issues</highlight></codeline>
+<codeline lineno="354"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="355"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>issue_keys<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a00d0f9ae006313a21576362d26ac5ec8" kindref="member">is_connected</ref>():</highlight></codeline>
+<codeline lineno="356"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>{}</highlight></codeline>
+<codeline lineno="357"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="358"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Get<sp/>the<sp/>primary<sp/>issue<sp/>(first<sp/>in<sp/>the<sp/>list)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="359"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>primary_issue<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aa967169a4b7970c67c0947b9ac56f746" kindref="member">get_detailed_issue_context</ref>(issue_keys[0])</highlight></codeline>
+<codeline lineno="360"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="361"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Get<sp/>basic<sp/>info<sp/>for<sp/>related<sp/>issues</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="362"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>related_issues<sp/>=<sp/>[]</highlight></codeline>
+<codeline lineno="363"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>key<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>issue_keys[1:]:<sp/><sp/></highlight><highlight class="comment">#<sp/>Skip<sp/>the<sp/>first<sp/>one<sp/>as<sp/>it&apos;s<sp/>the<sp/>primary</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="364"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>details<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a65f6924819084b7c8d268956a784804a" kindref="member">get_issue_details</ref>(key)</highlight></codeline>
+<codeline lineno="365"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>details:</highlight></codeline>
+<codeline lineno="366"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>related_issues.append(details)</highlight></codeline>
+<codeline lineno="367"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="368"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Build<sp/>context<sp/>dictionary<sp/>for<sp/>commit<sp/>message<sp/>enhancement</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="369"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>context<sp/>=<sp/>{</highlight></codeline>
+<codeline lineno="370"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;primary_issue&apos;</highlight><highlight class="normal">:<sp/>primary_issue,</highlight></codeline>
+<codeline lineno="371"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;related_issues&apos;</highlight><highlight class="normal">:<sp/>related_issues,</highlight></codeline>
+<codeline lineno="372"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;all_keys&apos;</highlight><highlight class="normal">:<sp/>issue_keys</highlight></codeline>
+<codeline lineno="373"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="374"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="375"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>context</highlight></codeline>
+<codeline lineno="376"><highlight class="normal"></highlight></codeline>
+<codeline lineno="377" refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a70d2c5a6432aa6f238da0ff65d49a760" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a70d2c5a6432aa6f238da0ff65d49a760" kindref="member">enhance_commit_message</ref>(self,<sp/>title:<sp/>str,<sp/>description:<sp/>str,<sp/>issue_keys:<sp/>List[str])<sp/>-&gt;<sp/>tuple:</highlight></codeline>
+<codeline lineno="378"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Enhance<sp/>a<sp/>commit<sp/>message<sp/>with<sp/>business<sp/>and<sp/>technical<sp/>context<sp/>from<sp/>JIRA</highlight></codeline>
+<codeline lineno="379"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>issues.</highlight></codeline>
+<codeline lineno="380"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="381"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="382"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>title<sp/>(str):<sp/>Original<sp/>commit<sp/>title.</highlight></codeline>
+<codeline lineno="383"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>description<sp/>(str):<sp/>Original<sp/>commit<sp/>description.</highlight></codeline>
+<codeline lineno="384"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>issue_keys<sp/>(List[str]):<sp/>List<sp/>of<sp/>JIRA<sp/>issue<sp/>keys<sp/>to<sp/>include<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the<sp/>enhanced<sp/>commit<sp/>message.</highlight></codeline>
+<codeline lineno="385"><highlight class="normal"></highlight></codeline>
+<codeline lineno="386"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="387"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>tuple:<sp/>A<sp/>tuple<sp/>containing<sp/>the<sp/>enhanced<sp/>commit<sp/>title<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>description<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>added</highlight></codeline>
+<codeline lineno="388"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>context<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>JIRA<sp/>issues.</highlight></codeline>
+<codeline lineno="389"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="390"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>issue_keys<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a00d0f9ae006313a21576362d26ac5ec8" kindref="member">is_connected</ref>():</highlight></codeline>
+<codeline lineno="391"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>title,<sp/>description</highlight></codeline>
+<codeline lineno="392"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="393"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Get<sp/>context<sp/>information<sp/>from<sp/>issues</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="394"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>context<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1afb41ce6f13c30b1265d439ddf04bf2cd" kindref="member">get_commit_context_from_issues</ref>(issue_keys)</highlight></codeline>
+<codeline lineno="395"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>context<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>context.get(</highlight><highlight class="stringliteral">&apos;primary_issue&apos;</highlight><highlight class="normal">):</highlight></codeline>
+<codeline lineno="396"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a49ea1149758f7f5212149d357b13cc23" kindref="member">format_commit_message_with_jira_info</ref>(title,<sp/>description,<sp/>issue_keys)</highlight></codeline>
+<codeline lineno="397"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="398"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Get<sp/>primary<sp/>issue</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="399"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>primary<sp/>=<sp/>context[</highlight><highlight class="stringliteral">&apos;primary_issue&apos;</highlight><highlight class="normal">]</highlight></codeline>
+<codeline lineno="400"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="401"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Enhance<sp/>title<sp/>with<sp/>primary<sp/>issue<sp/>key<sp/>and<sp/>summary<sp/>if<sp/>not<sp/>already<sp/>included</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="402"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>enhanced_title<sp/>=<sp/>title</highlight></codeline>
+<codeline lineno="403"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>any(key<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>title<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>key<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>issue_keys):</highlight></codeline>
+<codeline lineno="404"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>key<sp/>=<sp/>primary[</highlight><highlight class="stringliteral">&apos;key&apos;</highlight><highlight class="normal">]</highlight></codeline>
+<codeline lineno="405"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Keep<sp/>original<sp/>title,<sp/>but<sp/>prefix<sp/>with<sp/>issue<sp/>key</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="406"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>enhanced_title<sp/>=<sp/>f</highlight><highlight class="stringliteral">&quot;{key}:<sp/>{title}&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="407"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="408"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Enhance<sp/>description<sp/>with<sp/>business<sp/>and<sp/>technical<sp/>context</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="409"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>enhanced_description<sp/>=<sp/>description</highlight></codeline>
+<codeline lineno="410"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="411"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Add<sp/>business<sp/>context<sp/>section</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="412"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>business_section<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;\n\n##<sp/>Business<sp/>Context\n\n&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="413"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>business_section<sp/>+=<sp/>f</highlight><highlight class="stringliteral">&quot;**Issue**:<sp/>[{primary[&apos;key&apos;]}]({primary[&apos;url&apos;]})<sp/>-<sp/>{primary[&apos;summary&apos;]}\n&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="414"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>business_section<sp/>+=<sp/>f</highlight><highlight class="stringliteral">&quot;**Type**:<sp/>{primary[&apos;type&apos;]}\n&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="415"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>business_section<sp/>+=<sp/>f</highlight><highlight class="stringliteral">&quot;**Status**:<sp/>{primary[&apos;status&apos;]}\n&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="416"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>business_section<sp/>+=<sp/>f</highlight><highlight class="stringliteral">&quot;**Priority**:<sp/>{primary[&apos;priority&apos;]}\n&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="417"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="418"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;sprint&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>primary:</highlight></codeline>
+<codeline lineno="419"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>business_section<sp/>+=<sp/>f</highlight><highlight class="stringliteral">&quot;**Sprint**:<sp/>{primary[&apos;sprint&apos;]}\n&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="420"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="421"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;acceptance_criteria&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>primary:</highlight></codeline>
+<codeline lineno="422"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>business_section<sp/>+=<sp/>f</highlight><highlight class="stringliteral">&quot;\n**Acceptance<sp/>Criteria**:\n{primary[&apos;acceptance_criteria&apos;]}\n&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="423"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="424"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>primary.get(</highlight><highlight class="stringliteral">&apos;description&apos;</highlight><highlight class="normal">):</highlight></codeline>
+<codeline lineno="425"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Include<sp/>a<sp/>condensed<sp/>version<sp/>of<sp/>the<sp/>description<sp/>if<sp/>it&apos;s<sp/>not<sp/>too<sp/>long</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="426"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>desc<sp/>=<sp/>primary[</highlight><highlight class="stringliteral">&apos;description&apos;</highlight><highlight class="normal">]</highlight></codeline>
+<codeline lineno="427"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>len(desc)<sp/>&gt;<sp/>300:</highlight></codeline>
+<codeline lineno="428"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>desc<sp/>=<sp/>desc[:300]<sp/>+<sp/></highlight><highlight class="stringliteral">&quot;...&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="429"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>business_section<sp/>+=<sp/>f</highlight><highlight class="stringliteral">&quot;\n**Issue<sp/>Description**:\n{desc}\n&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="430"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="431"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Add<sp/>technical<sp/>context<sp/>from<sp/>comments<sp/>if<sp/>available</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="432"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>primary.get(</highlight><highlight class="stringliteral">&apos;comments&apos;</highlight><highlight class="normal">):</highlight></codeline>
+<codeline lineno="433"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>tech_section<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;\n##<sp/>Technical<sp/>Notes\n\n&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="434"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="435"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Extract<sp/>technical<sp/>details<sp/>from<sp/>comments<sp/>(often<sp/>devs<sp/>discuss<sp/>implementation<sp/>details<sp/>here)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="436"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>comment<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>primary[</highlight><highlight class="stringliteral">&apos;comments&apos;</highlight><highlight class="normal">]:</highlight></codeline>
+<codeline lineno="437"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>len(comment)<sp/>&gt;<sp/>200:<sp/><sp/></highlight><highlight class="comment">#<sp/>Only<sp/>include<sp/>shorter<sp/>technical<sp/>notes</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="438"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>comment<sp/>=<sp/>comment[:200]<sp/>+<sp/></highlight><highlight class="stringliteral">&quot;...&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="439"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>tech_section<sp/>+=<sp/>f</highlight><highlight class="stringliteral">&quot;-<sp/>{comment}\n\n&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="440"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="441"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>len(tech_section)<sp/>&gt;<sp/>50:<sp/><sp/></highlight><highlight class="comment">#<sp/>Only<sp/>add<sp/>if<sp/>there&apos;s<sp/>substantial<sp/>content</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="442"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>enhanced_description<sp/>+=<sp/>business_section<sp/>+<sp/>tech_section</highlight></codeline>
+<codeline lineno="443"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="444"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>enhanced_description<sp/>+=<sp/>business_section</highlight></codeline>
+<codeline lineno="445"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="446"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>enhanced_description<sp/>+=<sp/>business_section</highlight></codeline>
+<codeline lineno="447"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="448"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Add<sp/>related<sp/>issues<sp/>section</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="449"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>context.get(</highlight><highlight class="stringliteral">&apos;related_issues&apos;</highlight><highlight class="normal">):</highlight></codeline>
+<codeline lineno="450"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>related_section<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;\n##<sp/>Related<sp/>Issues\n\n&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="451"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>issue<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>context[</highlight><highlight class="stringliteral">&apos;related_issues&apos;</highlight><highlight class="normal">]:</highlight></codeline>
+<codeline lineno="452"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>related_section<sp/>+=<sp/>f</highlight><highlight class="stringliteral">&quot;-<sp/>[{issue[&apos;key&apos;]}]({issue[&apos;url&apos;]}):<sp/>{issue[&apos;summary&apos;]}<sp/>({issue[&apos;status&apos;]})\n&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="453"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="454"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>enhanced_description<sp/>+=<sp/>related_section</highlight></codeline>
+<codeline lineno="455"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="456"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>enhanced_title,<sp/>enhanced_description</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/llm__client_8py.xml b/docs345/xml/llm__client_8py.xml
new file mode 100644
index 0000000..e41b329
--- /dev/null
+++ b/docs345/xml/llm__client_8py.xml
@@ -0,0 +1,192 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="llm__client_8py" kind="file" language="Python">
+    <compoundname>llm_client.py</compoundname>
+    <innerclass refid="classpenify__hook_1_1llm__client_1_1LLMClient" prot="public">penify_hook::llm_client::LLMClient</innerclass>
+    <innernamespace refid="namespacepenify__hook">penify_hook</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1llm__client">penify_hook::llm_client</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacepenify__hook_1_1llm__client" refkind="compound"><highlight class="keyword">import</highlight><highlight class="normal"><sp/>json</highlight></codeline>
+<codeline lineno="2"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>os</highlight></codeline>
+<codeline lineno="3"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>sys</highlight></codeline>
+<codeline lineno="4"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>typing<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>Dict,<sp/>Optional,<sp/>List,<sp/>Any,<sp/>Union</highlight></codeline>
+<codeline lineno="5"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>time</highlight></codeline>
+<codeline lineno="6"><highlight class="normal"></highlight></codeline>
+<codeline lineno="7"><highlight class="normal"></highlight><highlight class="comment">#<sp/>Removed<sp/>eager<sp/>litellm<sp/>import<sp/>and<sp/>timing<sp/>code</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="8"><highlight class="normal"></highlight><highlight class="comment">#<sp/>Will<sp/>lazy<sp/>load<sp/>litellm<sp/>only<sp/>when<sp/>needed</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="9"><highlight class="normal"></highlight></codeline>
+<codeline lineno="10" refid="classpenify__hook_1_1llm__client_1_1LLMClient" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1llm__client_1_1LLMClient" kindref="compound">LLMClient</ref>:</highlight></codeline>
+<codeline lineno="11"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="12"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>Client<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>interacting<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>LLM<sp/>models<sp/>using<sp/>LiteLLM.</highlight></codeline>
+<codeline lineno="13"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="14"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="15" refid="classpenify__hook_1_1llm__client_1_1LLMClient_1a76d92354f585ab4bb291169f9f530764" refkind="member"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1llm__client_1_1LLMClient_1a76d92354f585ab4bb291169f9f530764" kindref="member">__init__</ref>(self,<sp/>model:<sp/>str<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">,<sp/>api_base:<sp/>str<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">,<sp/>api_key:<sp/>str<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">):</highlight></codeline>
+<codeline lineno="16"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="17"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Initialize<sp/>the<sp/>LLM<sp/>client.</highlight></codeline>
+<codeline lineno="18"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="19"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="20"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>model:<sp/>LLM<sp/>model<sp/>to<sp/>use<sp/>(e.g.,<sp/>&quot;gpt-4&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;ollama/llama2&quot;</highlight><highlight class="normal">,<sp/>etc.)</highlight></codeline>
+<codeline lineno="21"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_base:<sp/>Base<sp/>URL<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>API<sp/>requests<sp/>(e.g.,<sp/></highlight><highlight class="stringliteral">&quot;http://localhost:11434&quot;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>Ollama)</highlight></codeline>
+<codeline lineno="22"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_key:<sp/>API<sp/>key<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>LLM<sp/>service</highlight></codeline>
+<codeline lineno="23"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="24"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Configure<sp/>litellm<sp/>if<sp/>parameters<sp/>are<sp/>provided</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="25" refid="classpenify__hook_1_1llm__client_1_1LLMClient_1abc2cb6b1d6d9b5dc16401ca078ec8c10" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1llm__client_1_1LLMClient_1abc2cb6b1d6d9b5dc16401ca078ec8c10" kindref="member">model</ref><sp/>=<sp/>model</highlight></codeline>
+<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>api_base:</highlight></codeline>
+<codeline lineno="27"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>os.environ[</highlight><highlight class="stringliteral">&quot;OPENAI_API_BASE&quot;</highlight><highlight class="normal">]<sp/>=<sp/>api_base</highlight></codeline>
+<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>api_key:</highlight></codeline>
+<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>os.environ[</highlight><highlight class="stringliteral">&quot;OPENAI_API_KEY&quot;</highlight><highlight class="normal">]<sp/>=<sp/>api_key</highlight></codeline>
+<codeline lineno="30" refid="classpenify__hook_1_1llm__client_1_1LLMClient_1a76c2e9805f805624ab9c55a9f1f8d362" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1llm__client_1_1LLMClient_1a76c2e9805f805624ab9c55a9f1f8d362" kindref="member">_litellm</ref><sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="31"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@property</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="33" refid="classpenify__hook_1_1llm__client_1_1LLMClient_1ad6f06658ca922793f879474f2234518e" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1llm__client_1_1LLMClient_1ad6f06658ca922793f879474f2234518e" kindref="member">litellm</ref>(self):</highlight></codeline>
+<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Lazy<sp/>load<sp/>litellm<sp/>only<sp/>when<sp/>needed.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>self.<ref refid="classpenify__hook_1_1llm__client_1_1LLMClient_1a76c2e9805f805624ab9c55a9f1f8d362" kindref="member">_litellm</ref><sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>litellm</highlight></codeline>
+<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1llm__client_1_1LLMClient_1a76c2e9805f805624ab9c55a9f1f8d362" kindref="member">_litellm</ref><sp/>=<sp/>litellm</highlight></codeline>
+<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>self.<ref refid="classpenify__hook_1_1llm__client_1_1LLMClient_1a76c2e9805f805624ab9c55a9f1f8d362" kindref="member">_litellm</ref></highlight></codeline>
+<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="40" refid="classpenify__hook_1_1llm__client_1_1LLMClient_1a2ad3014dac466ee1d8e00306d0cf2000" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1llm__client_1_1LLMClient_1a2ad3014dac466ee1d8e00306d0cf2000" kindref="member">generate_commit_summary</ref>(self,<sp/>diff:<sp/>str,<sp/>message:<sp/>str,<sp/>generate_description:<sp/>bool,<sp/>repo_details:<sp/>Dict,<sp/>jira_context:<sp/>Dict<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">)<sp/>-&gt;<sp/>Dict:</highlight></codeline>
+<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Generate<sp/>a<sp/>commit<sp/>summary<sp/>using<sp/>the<sp/>LLM.</highlight></codeline>
+<codeline lineno="42"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="43"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>generates<sp/>a<sp/>concise<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>descriptive<sp/>commit<sp/>summary<sp/>based</highlight></codeline>
+<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>on<sp/>the<sp/>provided<sp/>Git<sp/>diff,<sp/>user<sp/>instructions,<sp/>repository<sp/>details,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>optional<sp/>JIRA<sp/>context.<sp/>It<sp/>constructs<sp/>a<sp/>prompt<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>LLM<sp/>to<sp/>produce<sp/>a</highlight></codeline>
+<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>commit<sp/>title<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>an<sp/>optional<sp/>detailed<sp/>description,<sp/>adhering<sp/>to<sp/>Semantic</highlight></codeline>
+<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Commit<sp/>Messages<sp/>guidelines.<sp/>If<sp/>the<sp/>JIRA<sp/>context<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>provided,<sp/>it<sp/>enriches</highlight></codeline>
+<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>the<sp/>prompt<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>relevant<sp/>issue<sp/>information.</highlight></codeline>
+<codeline lineno="49"><highlight class="normal"></highlight></codeline>
+<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>diff<sp/>(str):<sp/>Git<sp/>diff<sp/>of<sp/>changes.</highlight></codeline>
+<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>message<sp/>(str):<sp/>User-provided<sp/>commit<sp/>message<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/>instructions.</highlight></codeline>
+<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>generate_description<sp/>(bool):<sp/>Flag<sp/>indicating<sp/>whether<sp/>to<sp/>include<sp/>a<sp/>detailed<sp/>description<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the</highlight></codeline>
+<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>summary.</highlight></codeline>
+<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>repo_details<sp/>(Dict):<sp/>Details<sp/>about<sp/>the<sp/>repository.</highlight></codeline>
+<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_context<sp/>(Dict?):<sp/>Optional<sp/>JIRA<sp/>issue<sp/>context<sp/>to<sp/>enhance<sp/>the<sp/>summary.</highlight></codeline>
+<codeline lineno="57"><highlight class="normal"></highlight></codeline>
+<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Dict:<sp/>A<sp/>dictionary<sp/>containing<sp/>the<sp/>title<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>description<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>commit.<sp/>If</highlight></codeline>
+<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>generate_description<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>the<sp/></highlight><highlight class="stringliteral">&apos;description&apos;</highlight><highlight class="normal"><sp/>key<sp/>may<sp/>be<sp/>absent.</highlight></codeline>
+<codeline lineno="62"><highlight class="normal"></highlight></codeline>
+<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Raises:</highlight></codeline>
+<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>ValueError:<sp/>If<sp/>the<sp/>LLM<sp/>model<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>configured.</highlight></codeline>
+<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="66"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>self.<ref refid="classpenify__hook_1_1llm__client_1_1LLMClient_1abc2cb6b1d6d9b5dc16401ca078ec8c10" kindref="member">model</ref>:</highlight></codeline>
+<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">raise</highlight><highlight class="normal"><sp/>ValueError(</highlight><highlight class="stringliteral">&quot;LLM<sp/>model<sp/>not<sp/>configured.<sp/>Please<sp/>provide<sp/>a<sp/>model<sp/>when<sp/>initializing<sp/>LLMClient.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Limit<sp/>diff<sp/>size<sp/>to<sp/>avoid<sp/>token<sp/>limits</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>max_diff_chars<sp/>=<sp/>10000</highlight></codeline>
+<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>len(diff)<sp/>&gt;<sp/>max_diff_chars:</highlight></codeline>
+<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>diff<sp/>=<sp/>diff[:max_diff_chars]<sp/>+<sp/>f</highlight><highlight class="stringliteral">&quot;\n...<sp/>(diff<sp/>truncated,<sp/>total<sp/>{len(diff)}<sp/>characters)&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="73"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Create<sp/>prompt<sp/>for<sp/>the<sp/>LLM</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>prompt<sp/>=<sp/>f</highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="76"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Based<sp/>on<sp/>the<sp/>Git<sp/>diff<sp/>below,<sp/>generate<sp/>a<sp/>concise<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>descriptive<sp/>commit<sp/>summary.</highlight></codeline>
+<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="78"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>User<sp/>instructions:<sp/>{message}</highlight></codeline>
+<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="80"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="81"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Add<sp/>JIRA<sp/>context<sp/>if<sp/>available</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>jira_context<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>jira_context.get(</highlight><highlight class="stringliteral">&apos;primary_issue&apos;</highlight><highlight class="normal">):</highlight></codeline>
+<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>primary<sp/>=<sp/>jira_context[</highlight><highlight class="stringliteral">&apos;primary_issue&apos;</highlight><highlight class="normal">]</highlight></codeline>
+<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>prompt<sp/>+=<sp/>f</highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="85"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="86"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>JIRA<sp/>ISSUE<sp/>INFORMATION:</highlight></codeline>
+<codeline lineno="87"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Issue<sp/>Key:<sp/>{primary[&apos;key&apos;</highlight><highlight class="normal">]}</highlight></codeline>
+<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Summary:<sp/>{primary[</highlight><highlight class="stringliteral">&apos;summary&apos;</highlight><highlight class="normal">]}</highlight></codeline>
+<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Type:<sp/>{primary[</highlight><highlight class="stringliteral">&apos;type&apos;</highlight><highlight class="normal">]}</highlight></codeline>
+<codeline lineno="90"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Status:<sp/>{primary[</highlight><highlight class="stringliteral">&apos;status&apos;</highlight><highlight class="normal">]}</highlight></codeline>
+<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="92"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="93"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;description&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>primary<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>primary[</highlight><highlight class="stringliteral">&apos;description&apos;</highlight><highlight class="normal">]:</highlight></codeline>
+<codeline lineno="94"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Include<sp/>a<sp/>condensed<sp/>version<sp/>of<sp/>the<sp/>description</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="95"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>description<sp/>=<sp/>primary[</highlight><highlight class="stringliteral">&apos;description&apos;</highlight><highlight class="normal">]</highlight></codeline>
+<codeline lineno="96"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>len(description)<sp/>&gt;<sp/>500:</highlight></codeline>
+<codeline lineno="97"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>description<sp/>=<sp/>description[:500]<sp/>+<sp/></highlight><highlight class="stringliteral">&quot;...&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="98"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>prompt<sp/>+=<sp/>f</highlight><highlight class="stringliteral">&quot;Description:<sp/>{description}\n&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="99"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="100"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;acceptance_criteria&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>primary:</highlight></codeline>
+<codeline lineno="101"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>prompt<sp/>+=<sp/>f</highlight><highlight class="stringliteral">&quot;Acceptance<sp/>Criteria:<sp/>{primary[&apos;acceptance_criteria&apos;]}\n&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="102"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="103"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>prompt<sp/>+=<sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="104"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="105"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Please<sp/>make<sp/>sure<sp/>your<sp/>commit<sp/>message<sp/>addresses<sp/>the<sp/>business<sp/>requirements<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the<sp/>JIRA<sp/>issue</highlight></codeline>
+<codeline lineno="106"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">while</highlight><highlight class="normal"><sp/>accurately<sp/>describing<sp/>the<sp/>technical<sp/>changes<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the<sp/>diff.</highlight></codeline>
+<codeline lineno="107"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="108"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="109"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>prompt<sp/>+=<sp/>f&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="110"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="111"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Git<sp/>diff:</highlight></codeline>
+<codeline lineno="112"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>```</highlight></codeline>
+<codeline lineno="113"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{diff}</highlight></codeline>
+<codeline lineno="114"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>```</highlight></codeline>
+<codeline lineno="115"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="116"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Please<sp/>provide:</highlight></codeline>
+<codeline lineno="117"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>1.<sp/>A<sp/>short,<sp/>focused<sp/>commit<sp/>title<sp/>(50-72<sp/>characters)<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>a<sp/>Semantic<sp/>Commit<sp/>Messages<sp/>format.<sp/>Format:<sp/>&lt;type&gt;(&lt;scope&gt;):<sp/>&lt;subject&gt;</highlight></codeline>
+<codeline lineno="118"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight><highlight class="stringliteral">&apos;2.<sp/>A<sp/>detailed<sp/>description<sp/>that<sp/>explains<sp/>what<sp/>was<sp/>changed,<sp/>why<sp/>it<sp/>was<sp/>changed<sp/>in<sp/>both<sp/>business<sp/>and<sp/>technical<sp/>aspects,<sp/>and<sp/>any<sp/>important<sp/>context&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>generate_description<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;&apos;</highlight><highlight class="normal">}</highlight></codeline>
+<codeline lineno="119"><highlight class="normal"></highlight></codeline>
+<codeline lineno="120"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>List<sp/>of<sp/>Semantic<sp/>Commit<sp/>Message<sp/>types<sp/>that<sp/>you<sp/>can<sp/>use:</highlight></codeline>
+<codeline lineno="121"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>feat:<sp/>(new<sp/>feature<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>user,<sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>a<sp/>new<sp/>feature<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>build<sp/>script)</highlight></codeline>
+<codeline lineno="122"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>fix:<sp/>(bug<sp/>fix<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>user,<sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>a<sp/>fix<sp/>to<sp/>a<sp/>build<sp/>script)</highlight></codeline>
+<codeline lineno="123"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>docs:<sp/>(changes<sp/>to<sp/>the<sp/>documentation)</highlight></codeline>
+<codeline lineno="124"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>style:<sp/>(formatting,<sp/>missing<sp/>semi<sp/>colons,<sp/>etc;<sp/>no<sp/>production<sp/>code<sp/>change)</highlight></codeline>
+<codeline lineno="125"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>refactor:<sp/>(refactoring<sp/>production<sp/>code,<sp/>eg.<sp/>renaming<sp/>a<sp/>variable)</highlight></codeline>
+<codeline lineno="126"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>test:<sp/>(adding<sp/>missing<sp/>tests,<sp/>refactoring<sp/>tests;<sp/>no<sp/>production<sp/>code<sp/>change)</highlight></codeline>
+<codeline lineno="127"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>chore:<sp/>(updating<sp/>grunt<sp/>tasks<sp/>etc;<sp/>no<sp/>production<sp/>code<sp/>change)</highlight></codeline>
+<codeline lineno="128"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="129"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Format<sp/>your<sp/>response<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>valid<sp/>JSON<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;title&apos;</highlight><highlight class="normal"><sp/>{</highlight><highlight class="stringliteral">&quot;and<sp/>&apos;description&apos;&quot;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>generate_description<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;&apos;</highlight><highlight class="normal">}<sp/>keys.</highlight></codeline>
+<codeline lineno="130"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="131"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="132"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="133"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>the<sp/>LLM<sp/>using<sp/>litellm<sp/>-<sp/>now<sp/>using<sp/>the<sp/>lazy-loaded<sp/>property</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="134"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>response<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1llm__client_1_1LLMClient_1ad6f06658ca922793f879474f2234518e" kindref="member">litellm</ref>.completion(</highlight></codeline>
+<codeline lineno="135"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>model=self.<ref refid="classpenify__hook_1_1llm__client_1_1LLMClient_1abc2cb6b1d6d9b5dc16401ca078ec8c10" kindref="member">model</ref>,</highlight></codeline>
+<codeline lineno="136"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>messages=[{</highlight><highlight class="stringliteral">&quot;role&quot;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&quot;user&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;content&quot;</highlight><highlight class="normal">:<sp/>prompt}],</highlight></codeline>
+<codeline lineno="137"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>temperature=0.2,</highlight></codeline>
+<codeline lineno="138"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>max_tokens=800<sp/><sp/></highlight><highlight class="comment">#<sp/>Increased<sp/>token<sp/>limit<sp/>to<sp/>accommodate<sp/>detailed<sp/>descriptions</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="139"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>)<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="140"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>content<sp/>=<sp/>response.choices[0].message.content</highlight></codeline>
+<codeline lineno="141"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="142"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Extract<sp/>JSON<sp/>from<sp/>the<sp/>response</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="143"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="144"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Try<sp/>to<sp/>parse<sp/>the<sp/>entire<sp/>content<sp/>as<sp/>JSON</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="145"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>=<sp/>json.loads(content)</highlight></codeline>
+<codeline lineno="146"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>isinstance(result,<sp/>dict)<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;title&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>result<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;description&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>result:</highlight></codeline>
+<codeline lineno="147"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">raise</highlight><highlight class="normal"><sp/>ValueError(</highlight><highlight class="stringliteral">&quot;Invalid<sp/>JSON<sp/>structure&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="148"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="149"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>json.JSONDecodeError:</highlight></codeline>
+<codeline lineno="150"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>If<sp/>that<sp/>fails,<sp/>try<sp/>to<sp/>extract<sp/>JSON<sp/>from<sp/>the<sp/>content</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="151"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>re</highlight></codeline>
+<codeline lineno="152"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>json_match<sp/>=<sp/>re.search(</highlight><highlight class="stringliteral">r&apos;```json\s*(.*?)\s*```&apos;</highlight><highlight class="normal">,<sp/>content,<sp/>re.DOTALL)</highlight></codeline>
+<codeline lineno="153"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>json_match:</highlight></codeline>
+<codeline lineno="154"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>=<sp/>json.loads(json_match.group(1))</highlight></codeline>
+<codeline lineno="155"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="156"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Last<sp/>resort:<sp/>extract<sp/>title<sp/>and<sp/>description<sp/>directly</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="157"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>lines<sp/>=<sp/>content.split(</highlight><highlight class="stringliteral">&apos;\n&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="158"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>title<sp/>=<sp/>next((line<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>line<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>lines<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>line.strip()),<sp/></highlight><highlight class="stringliteral">&quot;Generated<sp/>commit&quot;</highlight><highlight class="normal">).strip()</highlight></codeline>
+<codeline lineno="159"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>description<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;\n&quot;</highlight><highlight class="normal">.join(line<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>line<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>lines[1:]<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>line.strip())</highlight></codeline>
+<codeline lineno="160"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>=<sp/>{</highlight></codeline>
+<codeline lineno="161"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;title&quot;</highlight><highlight class="normal">:<sp/>title,</highlight></codeline>
+<codeline lineno="162"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;description&quot;</highlight><highlight class="normal">:<sp/>description</highlight></codeline>
+<codeline lineno="163"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="164"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="165"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>generate_description<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;description&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>result:</highlight></codeline>
+<codeline lineno="166"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>If<sp/>description<sp/>is<sp/>missing<sp/>and<sp/>user<sp/>requested<sp/>it,<sp/>add<sp/>a<sp/>placeholder</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="167"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>del<sp/>result[</highlight><highlight class="stringliteral">&apos;description&apos;</highlight><highlight class="normal">]</highlight></codeline>
+<codeline lineno="168"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>result</highlight></codeline>
+<codeline lineno="169"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="170"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="171"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>sys.exit(f</highlight><highlight class="stringliteral">&quot;Error<sp/>generating<sp/>commit<sp/>summary:<sp/>{e}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="172"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Fallback<sp/>to<sp/>a<sp/>basic<sp/>summary<sp/>if<sp/>LLM<sp/>fails</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="173"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Error<sp/>generating<sp/>commit<sp/>summary<sp/>with<sp/>LLM:<sp/>{e}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="174"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>{</highlight></codeline>
+<codeline lineno="175"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;title&quot;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&quot;Update<sp/>code&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="176"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/llm_client.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/login__command_8py.xml b/docs345/xml/login__command_8py.xml
new file mode 100644
index 0000000..c498a49
--- /dev/null
+++ b/docs345/xml/login__command_8py.xml
@@ -0,0 +1,40 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="login__command_8py" kind="file" language="Python">
+    <compoundname>login_command.py</compoundname>
+    <innernamespace refid="namespacepenify__hook">penify_hook</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1login__command">penify_hook::login_command</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacepenify__hook_1_1login__command_1aae63db4c484797bead34b7d874020c6a" refkind="member"><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1login__command_1aae63db4c484797bead34b7d874020c6a" kindref="member">setup_login_parser</ref>(parser):</highlight></codeline>
+<codeline lineno="2"><highlight class="normal"><sp/><sp/><sp/><sp/>parser.add_argument(</highlight><highlight class="stringliteral">&quot;--token&quot;</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;Specify<sp/>API<sp/>token<sp/>directly&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="3"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Add<sp/>all<sp/>other<sp/>necessary<sp/>arguments<sp/>for<sp/>login<sp/>command</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="4"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="5" refid="namespacepenify__hook_1_1login__command_1ae4bf932fbafeff834b0a0c5a37f74ccd" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1login__command_1ae4bf932fbafeff834b0a0c5a37f74ccd" kindref="member">handle_login</ref>(args):</highlight></codeline>
+<codeline lineno="6"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Handle<sp/>the<sp/>login<sp/>command.</highlight></codeline>
+<codeline lineno="7"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="8"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>Initiates<sp/>a<sp/>user<sp/>login<sp/>process<sp/>by<sp/>calling<sp/>the<sp/>`login`<sp/>function<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>the</highlight></codeline>
+<codeline lineno="9"><highlight class="normal"><sp/><sp/><sp/><sp/>`<ref refid="namespacepenify__hook_1_1commands_1_1auth__commands" kindref="compound">penify_hook.commands.auth_commands</ref>`<sp/>module<sp/>using<sp/>predefined<sp/>constants</highlight></codeline>
+<codeline lineno="10"><highlight class="normal"><sp/><sp/><sp/><sp/>`API_URL`<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>`DASHBOARD_URL`<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>the<sp/>`<ref refid="namespacepenify__hook_1_1constants" kindref="compound">penify_hook.constants</ref>`<sp/>module.</highlight></codeline>
+<codeline lineno="11"><highlight class="normal"></highlight></codeline>
+<codeline lineno="12"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="13"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>args<sp/>(argparse.Namespace):<sp/>Parsed<sp/>arguments<sp/>containing<sp/>necessary<sp/>parameters<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>login<sp/>command.</highlight></codeline>
+<codeline lineno="14"><highlight class="normal"></highlight></codeline>
+<codeline lineno="15"><highlight class="normal"><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="16"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">:<sp/>This<sp/>function<sp/>does<sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>any<sp/>value;<sp/>it<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>expected<sp/>to<sp/>handle<sp/>the</highlight></codeline>
+<codeline lineno="17"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>login<sp/>process<sp/>internally.</highlight></codeline>
+<codeline lineno="18"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="19"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="20"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1constants" kindref="compound">penify_hook.constants</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>API_URL,<sp/>DASHBOARD_URL</highlight></codeline>
+<codeline lineno="21"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1commands_1_1auth__commands" kindref="compound">penify_hook.commands.auth_commands</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>login</highlight></codeline>
+<codeline lineno="22"><highlight class="normal"></highlight></codeline>
+<codeline lineno="23"><highlight class="normal"></highlight></codeline>
+<codeline lineno="24"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Only<sp/>import<sp/>dependencies<sp/>needed<sp/>for<sp/>login<sp/>functionality<sp/>here</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1commands_1_1auth__commands_1a78f375c58bb6f69f98675e6a9ac84655" kindref="member">login</ref>(API_URL,<sp/>DASHBOARD_URL)</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/login_command.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/main_8py.xml b/docs345/xml/main_8py.xml
new file mode 100644
index 0000000..83db594
--- /dev/null
+++ b/docs345/xml/main_8py.xml
@@ -0,0 +1,104 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="main_8py" kind="file" language="Python">
+    <compoundname>main.py</compoundname>
+    <innernamespace refid="namespacepenify__hook">penify_hook</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1main">penify_hook::main</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacepenify__hook_1_1main" refkind="compound"><highlight class="keyword">import</highlight><highlight class="normal"><sp/>argparse</highlight></codeline>
+<codeline lineno="2"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>sys</highlight></codeline>
+<codeline lineno="3"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>time</highlight></codeline>
+<codeline lineno="4"><highlight class="normal"></highlight></codeline>
+<codeline lineno="5"><highlight class="normal"></highlight></codeline>
+<codeline lineno="6" refid="namespacepenify__hook_1_1main_1a16838b20df4bd14ee4b5e1dd2906738f" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1main_1a16838b20df4bd14ee4b5e1dd2906738f" kindref="member">main</ref>():</highlight></codeline>
+<codeline lineno="7"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Main<sp/>function<sp/>to<sp/>handle<sp/>command-line<sp/>interface<sp/>(CLI)<sp/>interactions<sp/>with</highlight></codeline>
+<codeline lineno="8"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>Penify<sp/>services.</highlight></codeline>
+<codeline lineno="9"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="10"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>tool<sp/>provides<sp/>a<sp/>command-line<sp/>interface<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>generating<sp/>smart<sp/>commit</highlight></codeline>
+<codeline lineno="11"><highlight class="normal"><sp/><sp/><sp/><sp/>messages,<sp/>configuring<sp/>local-LLM<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>JIRA,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>generating<sp/>code</highlight></codeline>
+<codeline lineno="12"><highlight class="normal"><sp/><sp/><sp/><sp/>documentation.<sp/>It<sp/>supports<sp/>basic<sp/>commands<sp/>that<sp/>do<sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>require<sp/>login<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="13"><highlight class="normal"><sp/><sp/><sp/><sp/>advanced<sp/>commands<sp/>that<sp/>require<sp/>user<sp/>authentication.<sp/>The<sp/>`--version`<sp/>flag</highlight></codeline>
+<codeline lineno="14"><highlight class="normal"><sp/><sp/><sp/><sp/>can<sp/>be<sp/>used<sp/>to<sp/>display<sp/>the<sp/>version<sp/>information.</highlight></codeline>
+<codeline lineno="15"><highlight class="normal"></highlight></codeline>
+<codeline lineno="16"><highlight class="normal"><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="17"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>int:<sp/>Exit<sp/>status<sp/>of<sp/>the<sp/>program<sp/>(0<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>success,<sp/>1<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>error).</highlight></codeline>
+<codeline lineno="18"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="19"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="20"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>parser<sp/>=<sp/>argparse.ArgumentParser(</highlight></codeline>
+<codeline lineno="21"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>description=&quot;&quot;&quot;Penify<sp/>CLI<sp/>tool<sp/>for:</highlight></codeline>
+<codeline lineno="22"><highlight class="stringliteral">1.<sp/>AI<sp/>commit<sp/>message<sp/>generation<sp/>with<sp/>JIRA<sp/>integration<sp/>to<sp/>enhance<sp/>commit<sp/>messages.</highlight></codeline>
+<codeline lineno="23"><highlight class="stringliteral">2.<sp/>Generating<sp/>Code<sp/>Documentation,<sp/>it<sp/>requires<sp/>SignUp<sp/>to<sp/>Penify</highlight></codeline>
+<codeline lineno="24"><highlight class="stringliteral">3.<sp/>For<sp/>more<sp/>information,<sp/>visit<sp/>https://penify.wiki/dpc1&quot;&quot;&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>formatter_class=argparse.RawDescriptionHelpFormatter</highlight></codeline>
+<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/>)</highlight></codeline>
+<codeline lineno="27"><highlight class="normal"></highlight></codeline>
+<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Add<sp/>version<sp/>flag</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/>parser.add_argument(</highlight><highlight class="stringliteral">&apos;--version&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;-v&apos;</highlight><highlight class="normal">,<sp/>action=</highlight><highlight class="stringliteral">&apos;store_true&apos;</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&apos;Show<sp/>version<sp/>information&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="30"><highlight class="normal"></highlight></codeline>
+<codeline lineno="31"><highlight class="normal"><sp/><sp/><sp/><sp/>subparsers<sp/>=<sp/>parser.add_subparsers(title=</highlight><highlight class="stringliteral">&quot;options&quot;</highlight><highlight class="normal">,<sp/>dest=</highlight><highlight class="stringliteral">&quot;subcommands&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="32"><highlight class="normal"></highlight></codeline>
+<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Group<sp/>commands<sp/>logically</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/>basic_title<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;Basic<sp/>Commands<sp/>(No<sp/>login<sp/>required)&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/>advanced_title<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;Advanced<sp/>Commands<sp/>(Login<sp/>required)&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="36"><highlight class="normal"></highlight></codeline>
+<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Create<sp/>grouped<sp/>subparsers<sp/>(visually<sp/>separated<sp/>in<sp/>help<sp/>output)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/>parser.add_argument_group(basic_title)</highlight></codeline>
+<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/>parser.add_argument_group(advanced_title)</highlight></codeline>
+<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Set<sp/>up<sp/>subparsers<sp/>with<sp/>proper<sp/>imports<sp/>upfront</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="42"><highlight class="normal"><sp/><sp/><sp/><sp/>commit_parser<sp/>=<sp/>subparsers.add_parser(</highlight><highlight class="stringliteral">&quot;commit&quot;</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;Generate<sp/>smart<sp/>commit<sp/>messages<sp/>using<sp/>local-LLM(no<sp/>login<sp/>required).&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>.commands.commit_commands<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>setup_commit_parser</highlight></codeline>
+<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1commit__commands_1a8627583116eb78e31a4d3cdc16d2f15c" kindref="member">setup_commit_parser</ref>(commit_parser)</highlight></codeline>
+<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/>config_parser<sp/>=<sp/>subparsers.add_parser(</highlight><highlight class="stringliteral">&quot;config&quot;</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;Configure<sp/>local-LLM<sp/>and<sp/>JIRA.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>.config_command<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>setup_config_parser</highlight></codeline>
+<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1config__command_1a4f3eb92164a69df1446d745f8a09285e" kindref="member">setup_config_parser</ref>(config_parser)</highlight></codeline>
+<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/>login_parser<sp/>=<sp/>subparsers.add_parser(</highlight><highlight class="stringliteral">&quot;login&quot;</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;Log<sp/>in<sp/>to<sp/>Penify<sp/>to<sp/>use<sp/>advanced<sp/>features<sp/>like<sp/>&apos;docgen&apos;<sp/>generation.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>.login_command<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>setup_login_parser</highlight></codeline>
+<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1login__command_1aae63db4c484797bead34b7d874020c6a" kindref="member">setup_login_parser</ref>(login_parser)</highlight></codeline>
+<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/>docgen_parser<sp/>=<sp/>subparsers.add_parser(</highlight><highlight class="stringliteral">&quot;docgen&quot;</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;[REQUIRES<sp/>LOGIN]<sp/>Generate<sp/>code<sp/>documentation<sp/>for<sp/>the<sp/>Git<sp/>diff,<sp/>file<sp/>or<sp/>folder.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>.commands.doc_commands<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>setup_docgen_parser</highlight></codeline>
+<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1doc__commands_1acc7f4ead1b11951d885fa5c151c2cbe0" kindref="member">setup_docgen_parser</ref>(docgen_parser)</highlight></codeline>
+<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Parse<sp/>args<sp/>without<sp/>validation<sp/>first<sp/>to<sp/>check<sp/>for<sp/>simple<sp/>flags<sp/>like<sp/>--version</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;--version&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>sys.argv<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;-v&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>sys.argv:</highlight></codeline>
+<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>importlib.metadata<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>version</highlight></codeline>
+<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;penify<sp/>version<sp/>{version(&apos;penify&apos;)}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(</highlight><highlight class="stringliteral">&quot;penify<sp/>version<sp/>0.2.2&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0</highlight></codeline>
+<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Parse<sp/>the<sp/>arguments<sp/>to<sp/>determine<sp/>which<sp/>command<sp/>was<sp/>requested</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/>args<sp/>=<sp/>parser.parse_args()<sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Handle<sp/>the<sp/>commands</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>args.subcommands<sp/>==<sp/></highlight><highlight class="stringliteral">&quot;commit&quot;</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1ui__utils" kindref="compound">penify_hook.ui_utils</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>print_info</highlight></codeline>
+<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" kindref="member">print_info</ref>(</highlight><highlight class="stringliteral">&quot;Please<sp/>wait<sp/>while<sp/>we<sp/>generate<sp/>the<sp/>commit<sp/>message...&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="73"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>.commands.commit_commands<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>handle_commit</highlight></codeline>
+<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1commands_1_1commit__commands_1af4f739f524c38b437e4e47673d683e23" kindref="member">handle_commit</ref>(args)</highlight></codeline>
+<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">elif</highlight><highlight class="normal"><sp/>args.subcommands<sp/>==<sp/></highlight><highlight class="stringliteral">&quot;config&quot;</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>.config_command<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>handle_config</highlight></codeline>
+<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1config__command_1a240e5331681eb574ac319d7458783bde" kindref="member">handle_config</ref>(args)</highlight></codeline>
+<codeline lineno="78"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">elif</highlight><highlight class="normal"><sp/>args.subcommands<sp/>==<sp/></highlight><highlight class="stringliteral">&quot;login&quot;</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>.login_command<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>handle_login</highlight></codeline>
+<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1login__command_1ae4bf932fbafeff834b0a0c5a37f74ccd" kindref="member">handle_login</ref>(args)</highlight></codeline>
+<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">elif</highlight><highlight class="normal"><sp/>args.subcommands<sp/>==<sp/></highlight><highlight class="stringliteral">&quot;docgen&quot;</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>.commands.doc_commands<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>handle_docgen</highlight></codeline>
+<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a2006ab13bff718ef783868a910c0b704" kindref="member">handle_docgen</ref>(args)</highlight></codeline>
+<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="85"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>parser.print_help()</highlight></codeline>
+<codeline lineno="86"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1</highlight></codeline>
+<codeline lineno="87"><highlight class="normal"></highlight></codeline>
+<codeline lineno="88"><highlight class="normal"></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>__name__<sp/>==<sp/></highlight><highlight class="stringliteral">&quot;__main__&quot;</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/>sys.exit(<ref refid="namespacepenify__hook_1_1main_1a16838b20df4bd14ee4b5e1dd2906738f" kindref="member">main</ref>())</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/main.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README.xml b/docs345/xml/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README.xml
new file mode 100644
index 0000000..3f93092
--- /dev/null
+++ b/docs345/xml/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README.xml
@@ -0,0 +1,163 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README" kind="page">
+    <compoundname>md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README</compoundname>
+    <title>Penify CLI Tool</title>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+<para><image type="html" name="https://github.com/yourorganization/penify-cli/workflows/Tests/badge.svg" alt="Tests" inline="yes"></image>
+ <image type="html" name="./coverage.svg" alt="Coverage" inline="yes"></image>
+</para>
+<para>A CLI tool to generate smart commit messages, code documentation, and more.</para>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md157">
+<title>Features</title>
+<para><itemizedlist>
+<listitem><para>Automatically generate documentation for your code</para>
+</listitem><listitem><para>Support for multiple programming languages</para>
+</listitem><listitem><para>Git hook integration for automatic documentation on commits</para>
+</listitem><listitem><para>Folder and file analysis</para>
+</listitem></itemizedlist>
+</para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md158">
+<title>Installation</title>
+<para>Install from PyPI:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">pip<sp/>install<sp/>penify</highlight></codeline>
+</programlisting></para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md159">
+<title>Usage</title>
+<para>Penify CLI provides several subcommands for different functionalities, organized into basic commands (no login required) and advanced commands (login required).</para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md160">
+<title>Basic Commands (No login required)</title>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md161">
+<title>Commit</title>
+<para>Generate smart commit messages using local LLM:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>commit<sp/>[-m<sp/>&quot;Optional<sp/>message&quot;]<sp/>[-e]<sp/>[-d]</highlight></codeline>
+</programlisting></para>
+<para>Options:<itemizedlist>
+<listitem><para><computeroutput>-m, --message</computeroutput>: Optional custom commit message</para>
+</listitem><listitem><para><computeroutput>-e, --terminal</computeroutput>: Open editor to modify commit message before committing</para>
+</listitem><listitem><para><computeroutput>-d, --description</computeroutput>: Generate commit message with both title and description (without this flag, only title is generated)</para>
+</listitem></itemizedlist>
+</para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md162">
+<title>Config</title>
+<para>Configure local LLM and JIRA settings:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#<sp/>Configure<sp/>LLM<sp/>settings</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>config<sp/>llm<sp/>--model<sp/>MODEL_NAME<sp/>[--api-base<sp/>API_URL]<sp/>[--api-key<sp/>API_KEY]</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Configure<sp/>LLM<sp/>settings<sp/>through<sp/>web<sp/>interface</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>config<sp/>llm-web</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Configure<sp/>JIRA<sp/>settings</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>config<sp/>jira<sp/>--url<sp/>JIRA_URL<sp/>--username<sp/>USERNAME<sp/>--api-token<sp/>TOKEN<sp/>[--verify]</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Configure<sp/>JIRA<sp/>settings<sp/>through<sp/>web<sp/>interface</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>config<sp/>jira-web</highlight></codeline>
+</programlisting></para>
+</sect2>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md163">
+<title>Advanced Commands (Login required)</title>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md164">
+<title>Login</title>
+<para>To log in and obtain an API token:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>login</highlight></codeline>
+</programlisting></para>
+<para>This command will open a browser window for authentication. After successful login, the API key will be saved locally for future use.</para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md165">
+<title>Documentation Generation</title>
+<para>Generate documentation for Git diff, files or folders:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#<sp/>Generate<sp/>documentation<sp/>for<sp/>latest<sp/>Git<sp/>commit<sp/>diff</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Generate<sp/>documentation<sp/>for<sp/>specific<sp/>file<sp/>or<sp/>folder</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>/path/to/file/or/folder</highlight></codeline>
+</programlisting></para>
+<para>Options:<itemizedlist>
+<listitem><para><computeroutput>-l, --location</computeroutput>: Path to specific file or folder for documentation generation (defaults to current directory)</para>
+</listitem></itemizedlist>
+</para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md166">
+<title>Git Hook Management</title>
+<para>Install or uninstall Git post-commit hooks:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#<sp/>Install<sp/>Git<sp/>hook</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>install-hook<sp/>[-l<sp/>/path/to/repo]</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Uninstall<sp/>Git<sp/>hook</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>uninstall-hook<sp/>[-l<sp/>/path/to/repo]</highlight></codeline>
+</programlisting></para>
+<para>Options:<itemizedlist>
+<listitem><para><computeroutput>-l, --location</computeroutput>: Path to the Git repository (defaults to current directory)</para>
+</listitem></itemizedlist>
+</para>
+</sect2>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md167">
+<title>Authentication</title>
+<para>Penify CLI uses an API token for authentication with advanced features.</para>
+<para>If no token is available and you try to access an advanced feature, you&apos;ll be prompted to log in.</para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md168">
+<title>Local LLM Configuration</title>
+<para>For commit message generation, Penify can use a local LLM. Configure it using:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>config<sp/>llm<sp/>--model<sp/>MODEL_NAME<sp/>--api-base<sp/>API_URL<sp/>--api-key<sp/>API_KEY</highlight></codeline>
+</programlisting></para>
+<para>Common configurations:<itemizedlist>
+<listitem><para>OpenAI: <computeroutput>--model gpt-3.5-turbo --api-base <ulink url="https://api.openai.com/v1">https://api.openai.com/v1</ulink> --api-key YOUR_KEY</computeroutput></para>
+</listitem><listitem><para>Anthropic: <computeroutput>--model claude-2 --api-base <ulink url="https://api.anthropic.com">https://api.anthropic.com</ulink> --api-key YOUR_KEY</computeroutput></para>
+</listitem></itemizedlist>
+</para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md169">
+<title>JIRA Integration</title>
+<para>Configure JIRA integration to enhance commit messages with issue details:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>config<sp/>jira<sp/>--url<sp/>https://your-domain.atlassian.net<sp/>--username<sp/>your-email@example.com<sp/>--api-token<sp/>YOUR_API_TOKEN</highlight></codeline>
+</programlisting></para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md170">
+<title>Development</title>
+<para>To set up the development environment:</para>
+<para><orderedlist>
+<listitem><para>Clone the repository: <programlisting filename=".bash"><codeline><highlight class="normal">git<sp/>clone<sp/>https://github.com/SingularityX-ai/penify-cli.git</highlight></codeline>
+</programlisting></para>
+</listitem><listitem><para>Install the package in editable mode: <programlisting filename=".bash"><codeline><highlight class="normal">pip<sp/>install<sp/>-e<sp/>.</highlight></codeline>
+</programlisting></para>
+</listitem></orderedlist>
+</para>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md171">
+<title>Running Tests</title>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">pytest</highlight></codeline>
+</programlisting></para>
+</sect2>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md172">
+<title>License</title>
+<para>This project is licensed under the MIT License.</para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md173">
+<title>Author</title>
+<para>Suman Saurabh (<ulink url="mailto:ss.sumansaurabh92@gmail.com">ss.sumansaurabh92@gmail.com</ulink>)</para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md174">
+<title>Contributing</title>
+<para>Contributions are welcome! Please feel free to submit a Pull Request.</para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md175">
+<title>Issues</title>
+<para>If you encounter any problems or have suggestions, please file an issue on the <ulink url="https://github.com/SingularityX-ai/penify/issues">GitHub repository</ulink>.</para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md176">
+<title>Support</title>
+<para>For automated API Documentation, Architecture Documentation, Code Documentation, Pull Request Documentation, or if you need a demo, please join our <ulink url="https://discord.gg/wqrc8JeV">Discord support channel</ulink>. </para>
+</sect1>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/README.md"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands.xml b/docs345/xml/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands.xml
new file mode 100644
index 0000000..ddb149f
--- /dev/null
+++ b/docs345/xml/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands.xml
@@ -0,0 +1,172 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands" kind="page">
+    <compoundname>md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands</compoundname>
+    <title>Penify CLI - Commit Commands</title>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+<para>The <computeroutput>commit</computeroutput> command allows you to generate smart, AI-powered commit messages for your Git changes. This document explains all available options and combinations.</para>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md1">
+<title>Basic Usage</title>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>commit</highlight></codeline>
+</programlisting></para>
+<para>By default, this command:<itemizedlist>
+<listitem><para>Analyzes your staged Git changes</para>
+</listitem><listitem><para>Generates a concise commit title only</para>
+</listitem><listitem><para>Uses local LLM if configured, or falls back to Penify API</para>
+</listitem></itemizedlist>
+</para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md2">
+<title>Command Options</title>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md3">
+<title>&lt;tt&gt;-m, --message&lt;/tt&gt;</title>
+<para>Provide context for the commit message generation:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>commit<sp/>-m<sp/>&quot;Fix<sp/>login<sp/>flow&quot;</highlight></codeline>
+</programlisting></para>
+<para>This hint helps the AI understand your intention and improves the quality of the generated message.</para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md4">
+<title>&lt;tt&gt;-e, --terminal&lt;/tt&gt;</title>
+<para>Open an editor to review and edit the generated commit message before committing:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>commit<sp/>-e</highlight></codeline>
+</programlisting></para>
+<para>This opens your default Git editor with the generated message for review.</para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md5">
+<title>&lt;tt&gt;-d, --description&lt;/tt&gt;</title>
+<para>Generate a detailed commit message with both title and description:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>commit<sp/>-d</highlight></codeline>
+</programlisting></para>
+<para>Without this flag, only the commit title is generated.</para>
+</sect2>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md6">
+<title>Option Combinations</title>
+<para>You can combine these options for different workflows:</para>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md7">
+<title>Generate Title Only with Context</title>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>commit<sp/>-m<sp/>&quot;Update<sp/>login<sp/>UI&quot;</highlight></codeline>
+</programlisting></para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md8">
+<title>Generate Title and Description with Context</title>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>commit<sp/>-m<sp/>&quot;Update<sp/>login<sp/>UI&quot;<sp/>-d</highlight></codeline>
+</programlisting></para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md9">
+<title>Generate and Edit Full Commit Message</title>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>commit<sp/>-d<sp/>-e</highlight></codeline>
+</programlisting></para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md10">
+<title>Generate, Edit, and Provide Context</title>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>commit<sp/>-m<sp/>&quot;Refactor<sp/>authentication&quot;<sp/>-d<sp/>-e</highlight></codeline>
+</programlisting></para>
+</sect2>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md11">
+<title>LLM and JIRA Integration</title>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md12">
+<title>Using Local LLM</title>
+<para>If you&apos;ve configured a local LLM using <computeroutput>penify config llm</computeroutput>, the commit command will automatically use it for message generation.</para>
+<para>Benefits:<itemizedlist>
+<listitem><para>Privacy: your code changes don&apos;t leave your machine</para>
+</listitem><listitem><para>Speed: no network latency</para>
+</listitem><listitem><para>Works offline</para>
+</listitem></itemizedlist>
+</para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md13">
+<title>JIRA Enhancement</title>
+<para>If you&apos;ve configured JIRA integration using <computeroutput>penify config jira</computeroutput>, the commit command will:</para>
+<para><orderedlist>
+<listitem><para>Detect JIRA issue references in your changes</para>
+</listitem><listitem><para>Fetch issue details from your JIRA instance</para>
+</listitem><listitem><para>Include issue information in the commit message</para>
+</listitem><listitem><para>Format the commit message according to JIRA&apos;s smart commit format</para>
+</listitem></orderedlist>
+</para>
+<para>Example output: <programlisting><codeline><highlight class="normal">PROJ-123:<sp/>Fix<sp/>authentication<sp/>bug<sp/>in<sp/>login<sp/>flow</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>Updated<sp/>OAuth<sp/>token<sp/>validation</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Fixed<sp/>session<sp/>timeout<sp/>handling</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Added<sp/>unit<sp/>tests<sp/>for<sp/>edge<sp/>cases</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">[PROJ-123]</highlight></codeline>
+</programlisting></para>
+</sect2>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md14">
+<title>Configuration Requirements</title>
+<para>For the <computeroutput>commit</computeroutput> command to work:</para>
+<para><orderedlist>
+<listitem><para>You must have configured either:<itemizedlist>
+<listitem><para>Local LLM via <computeroutput>penify config llm</computeroutput>, OR</para>
+</listitem><listitem><para>Logged in via <computeroutput>penify login</computeroutput></para>
+</listitem></itemizedlist>
+</para>
+</listitem><listitem><para>For JIRA enhancement (optional):<itemizedlist>
+<listitem><para>Configure JIRA via <computeroutput>penify config jira</computeroutput></para>
+</listitem></itemizedlist>
+</para>
+</listitem></orderedlist>
+</para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md15">
+<title>Examples</title>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md16">
+<title>Basic Commit with Default Settings</title>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#<sp/>Stage<sp/>your<sp/>changes</highlight></codeline>
+<codeline><highlight class="normal">git<sp/>add<sp/>.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Generate<sp/>commit<sp/>message</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>commit</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Commit<sp/>with<sp/>the<sp/>generated<sp/>message</highlight></codeline>
+<codeline><highlight class="normal">git<sp/>commit<sp/>-m<sp/>&quot;Generated<sp/>message<sp/>here&quot;</highlight></codeline>
+</programlisting></para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md17">
+<title>Full Workflow with All Features</title>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#<sp/>Stage<sp/>your<sp/>changes</highlight></codeline>
+<codeline><highlight class="normal">git<sp/>add<sp/>.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Generate<sp/>detailed<sp/>commit<sp/>message<sp/>with<sp/>JIRA<sp/>integration,<sp/></highlight></codeline>
+<codeline><highlight class="normal">#<sp/>provide<sp/>context,<sp/>and<sp/>open<sp/>editor<sp/>for<sp/>review</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>commit<sp/>-m<sp/>&quot;Fix<sp/>login<sp/>issue&quot;<sp/>-d<sp/>-e</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>The<sp/>commit<sp/>is<sp/>automatically<sp/>completed<sp/>after<sp/>you<sp/>save<sp/>and<sp/>exit<sp/>the<sp/>editor</highlight></codeline>
+</programlisting></para>
+</sect2>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md18">
+<title>Troubleshooting</title>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md19">
+<title>Common Issues</title>
+<para><orderedlist>
+<listitem><para>**&quot;No LLM model or API token provided&quot;**<itemizedlist>
+<listitem><para>Run <computeroutput>penify config llm</computeroutput> to configure a local LLM, or</para>
+</listitem><listitem><para>Run <computeroutput>penify login</computeroutput> to authenticate with Penify</para>
+</listitem></itemizedlist>
+</para>
+</listitem><listitem><para>**&quot;Failed to connect to JIRA&quot;**<itemizedlist>
+<listitem><para>Check your JIRA configuration with <computeroutput>cat ~/.penify</computeroutput></para>
+</listitem><listitem><para>Verify your network connection</para>
+</listitem><listitem><para>Ensure your JIRA credentials are valid</para>
+</listitem></itemizedlist>
+</para>
+</listitem><listitem><para>**&quot;Error initializing LLM client&quot;**<itemizedlist>
+<listitem><para>Verify your LLM configuration settings</para>
+</listitem><listitem><para>Ensure the LLM API is accessible </para>
+</listitem></itemizedlist>
+</para>
+</listitem></orderedlist>
+</para>
+</sect2>
+</sect1>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/commit-commands.md"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands.xml b/docs345/xml/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands.xml
new file mode 100644
index 0000000..6606065
--- /dev/null
+++ b/docs345/xml/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands.xml
@@ -0,0 +1,205 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands" kind="page">
+    <compoundname>md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands</compoundname>
+    <title>Penify CLI - Configuration Commands</title>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+<para>The <computeroutput>config</computeroutput> command allows you to set up and manage configuration settings for Penify CLI. This document explains all available configuration options and how to use them.</para>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md21">
+<title>Configuration Overview</title>
+<para>Penify CLI stores configuration in a JSON file at <computeroutput>~/.penify/config.json</computeroutput>. The configuration includes:</para>
+<para><itemizedlist>
+<listitem><para>LLM (Large Language Model) settings for local commit message generation</para>
+</listitem><listitem><para>JIRA integration settings for enhanced commit messages</para>
+</listitem><listitem><para>API tokens and other credentials</para>
+</listitem></itemizedlist>
+</para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md22">
+<title>Basic Usage</title>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#<sp/>Configure<sp/>LLM<sp/>settings</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>config<sp/>llm</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Configure<sp/>JIRA<sp/>integration</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>config<sp/>jira</highlight></codeline>
+</programlisting></para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md23">
+<title>LLM Configuration</title>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md24">
+<title>Web Interface</title>
+<para>Running <computeroutput>penify config llm</computeroutput> opens a web interface in your browser where you can configure:</para>
+<para><orderedlist>
+<listitem><para><bold>Model</bold>: The LLM model to use (e.g., <computeroutput>gpt-3.5-turbo</computeroutput>)</para>
+</listitem><listitem><para><bold>API Base URL</bold>: The endpoint URL for your LLM API (e.g., <computeroutput><ulink url="https://api.openai.com/v1">https://api.openai.com/v1</ulink></computeroutput>)</para>
+</listitem><listitem><para><bold>API Key</bold>: Your authentication key for the LLM API</para>
+</listitem></orderedlist>
+</para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md25">
+<title>Supported LLMs</title>
+<para>Penify CLI supports various LLM providers:</para>
+<sect3 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md26">
+<title>OpenAI</title>
+<para><itemizedlist>
+<listitem><para>Model: <computeroutput>gpt-3.5-turbo</computeroutput> or <computeroutput>gpt-4</computeroutput></para>
+</listitem><listitem><para>API Base: <computeroutput><ulink url="https://api.openai.com/v1">https://api.openai.com/v1</ulink></computeroutput></para>
+</listitem><listitem><para>API Key: Your OpenAI API key</para>
+</listitem></itemizedlist>
+</para>
+</sect3>
+<sect3 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md27">
+<title>Anthropic</title>
+<para><itemizedlist>
+<listitem><para>Model: <computeroutput>claude-instant-1</computeroutput> or <computeroutput>claude-2</computeroutput></para>
+</listitem><listitem><para>API Base: <computeroutput><ulink url="https://api.anthropic.com/v1">https://api.anthropic.com/v1</ulink></computeroutput></para>
+</listitem><listitem><para>API Key: Your Anthropic API key</para>
+</listitem></itemizedlist>
+</para>
+</sect3>
+<sect3 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md28">
+<title>Ollama (Local)</title>
+<para><itemizedlist>
+<listitem><para>Model: <computeroutput>llama2</computeroutput> or any model you have installed</para>
+</listitem><listitem><para>API Base: <computeroutput><ulink url="http://localhost:11434">http://localhost:11434</ulink></computeroutput></para>
+</listitem><listitem><para>API Key: (leave blank)</para>
+</listitem></itemizedlist>
+</para>
+</sect3>
+<sect3 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md29">
+<title>Azure OpenAI</title>
+<para><itemizedlist>
+<listitem><para>Model: Your deployed model name</para>
+</listitem><listitem><para>API Base: Your Azure endpoint</para>
+</listitem><listitem><para>API Key: Your Azure API key</para>
+</listitem></itemizedlist>
+</para>
+</sect3>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md30">
+<title>Configuration File Structure</title>
+<para>After configuration, your <computeroutput>~/.penify/config.json</computeroutput> will contain:</para>
+<para><programlisting filename=".json"><codeline><highlight class="normal">{</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>&quot;llm&quot;:<sp/>{</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>&quot;model&quot;:<sp/>&quot;gpt-3.5-turbo&quot;,</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>&quot;api_base&quot;:<sp/>&quot;https://api.openai.com/v1&quot;,</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>&quot;api_key&quot;:<sp/>&quot;sk-...&quot;</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>}</highlight></codeline>
+<codeline><highlight class="normal">}</highlight></codeline>
+</programlisting></para>
+</sect2>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md31">
+<title>JIRA Configuration</title>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md32">
+<title>Web Interface</title>
+<para>Running <computeroutput>penify config jira</computeroutput> opens a web interface where you can configure:</para>
+<para><orderedlist>
+<listitem><para><bold>JIRA URL</bold>: Your JIRA instance URL (e.g., <computeroutput><ulink url="https://yourcompany.atlassian.net">https://yourcompany.atlassian.net</ulink></computeroutput>)</para>
+</listitem><listitem><para><bold>Username</bold>: Your JIRA username (typically your email)</para>
+</listitem><listitem><para><bold>API Token</bold>: Your JIRA API token</para>
+</listitem></orderedlist>
+</para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md33">
+<title>Creating a JIRA API Token</title>
+<para><orderedlist>
+<listitem><para>Log in to <ulink url="https://id.atlassian.com/manage-profile/security/api-tokens">https://id.atlassian.com/manage-profile/security/api-tokens</ulink></para>
+</listitem><listitem><para>Click &quot;Create API token&quot;</para>
+</listitem><listitem><para>Give it a name (e.g., &quot;Penify CLI&quot;)</para>
+</listitem><listitem><para>Copy the generated token and paste it into the configuration</para>
+</listitem></orderedlist>
+</para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md34">
+<title>Configuration File Structure</title>
+<para>After configuration, your <computeroutput>~/.penify/config.json</computeroutput> will contain:</para>
+<para><programlisting filename=".json"><codeline><highlight class="normal">{</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>&quot;jira&quot;:<sp/>{</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>&quot;url&quot;:<sp/>&quot;https://yourcompany.atlassian.net&quot;,</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>&quot;username&quot;:<sp/>&quot;your.email@example.com&quot;,</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>&quot;api_token&quot;:<sp/>&quot;your-jira-api-token&quot;</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>}</highlight></codeline>
+<codeline><highlight class="normal">}</highlight></codeline>
+</programlisting></para>
+</sect2>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md35">
+<title>Configuration Locations</title>
+<para>Penify CLI looks for configuration in multiple locations:</para>
+<para><orderedlist>
+<listitem><para>Project-specific: <computeroutput>.penify/config.json</computeroutput> in the Git repository root</para>
+</listitem><listitem><para>User-specific: <computeroutput>~/.penify/config.json</computeroutput> in your home directory</para>
+</listitem></orderedlist>
+</para>
+<para>The project-specific configuration takes precedence if both exist.</para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md36">
+<title>Environment Variables</title>
+<para>You can override configuration settings using environment variables:</para>
+<para><itemizedlist>
+<listitem><para><computeroutput>PENIFY_API_TOKEN</computeroutput>: Override the stored API token</para>
+</listitem><listitem><para><computeroutput>PENIFY_LLM_MODEL</computeroutput>: Override the configured LLM model</para>
+</listitem><listitem><para><computeroutput>PENIFY_LLM_API_BASE</computeroutput>: Override the configured LLM API base URL</para>
+</listitem><listitem><para><computeroutput>PENIFY_LLM_API_KEY</computeroutput>: Override the configured LLM API key</para>
+</listitem><listitem><para><computeroutput>PENIFY_JIRA_URL</computeroutput>: Override the configured JIRA URL</para>
+</listitem><listitem><para><computeroutput>PENIFY_JIRA_USER</computeroutput>: Override the configured JIRA username</para>
+</listitem><listitem><para><computeroutput>PENIFY_JIRA_TOKEN</computeroutput>: Override the configured JIRA API token</para>
+</listitem></itemizedlist>
+</para>
+<para>Example: <programlisting filename=".bash"><codeline><highlight class="normal">export<sp/>PENIFY_LLM_MODEL=&quot;gpt-4&quot;</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>commit</highlight></codeline>
+</programlisting></para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md37">
+<title>Command-Line Configuration</title>
+<para>For advanced users or scripting, you can directly edit the configuration file:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#<sp/>View<sp/>current<sp/>configuration</highlight></codeline>
+<codeline><highlight class="normal">cat<sp/>~/.penify/config.json</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Edit<sp/>configuration<sp/>with<sp/>your<sp/>preferred<sp/>editor</highlight></codeline>
+<codeline><highlight class="normal">nano<sp/>~/.penify/config.json</highlight></codeline>
+</programlisting></para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md38">
+<title>Sharing Configuration</title>
+<para>You can share configuration between machines by copying the <computeroutput>.penify/config.json</computeroutput> file. However, be cautious with API keys and credentials.</para>
+<para>For team settings, consider:<orderedlist>
+<listitem><para>Using a project-specific <computeroutput>.penify/config.json</computeroutput> with shared settings</para>
+</listitem><listitem><para>Excluding API keys from shared configuration</para>
+</listitem><listitem><para>Using environment variables for sensitive credentials</para>
+</listitem></orderedlist>
+</para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md39">
+<title>Troubleshooting</title>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md40">
+<title>Common Issues</title>
+<para><orderedlist>
+<listitem><para>**&quot;Error reading configuration file&quot;**<itemizedlist>
+<listitem><para>Check if the file exists: <computeroutput>ls -la ~/.penify</computeroutput></para>
+</listitem><listitem><para>Ensure it contains valid JSON: <computeroutput>cat ~/.penify/config.json</computeroutput></para>
+</listitem></itemizedlist>
+</para>
+</listitem><listitem><para>**&quot;Failed to connect to LLM API&quot;**<itemizedlist>
+<listitem><para>Verify API base URL and API key</para>
+</listitem><listitem><para>Check network connectivity to the API endpoint</para>
+</listitem><listitem><para>Ensure your account has access to the specified model</para>
+</listitem></itemizedlist>
+</para>
+</listitem><listitem><para>**&quot;Failed to connect to JIRA&quot;**<itemizedlist>
+<listitem><para>Check JIRA URL format (should include <computeroutput><ulink url="https://">https://</ulink></computeroutput>)</para>
+</listitem><listitem><para>Verify username and API token</para>
+</listitem><listitem><para>Ensure your JIRA account has API access permissions </para>
+</listitem></itemizedlist>
+</para>
+</listitem></orderedlist>
+</para>
+</sect2>
+</sect1>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/config-commands.md"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage.xml b/docs345/xml/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage.xml
new file mode 100644
index 0000000..e1fa5b4
--- /dev/null
+++ b/docs345/xml/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage.xml
@@ -0,0 +1,197 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage" kind="page">
+    <compoundname>md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage</compoundname>
+    <title>Penify CLI - Detailed Usage Guide</title>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+<para>This document provides in-depth information about all features and capabilities of the Penify CLI tool.</para>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md42">
+<title>Table of Contents</title>
+<para><itemizedlist>
+<listitem><para>Penify CLI - Detailed Usage Guide<itemizedlist>
+<listitem><para>Table of Contents</para>
+</listitem><listitem><para>Authentication<itemizedlist>
+<listitem><para>Login Process</para>
+</listitem><listitem><para>API Token Storage</para>
+</listitem><listitem><para>Token Precedence</para>
+</listitem></itemizedlist>
+</para>
+</listitem><listitem><para>Command Overview</para>
+</listitem><listitem><para>Commit Message Generation</para>
+</listitem><listitem><para>Code Documentation Generation<itemizedlist>
+<listitem><para>Use Cases</para>
+</listitem><listitem><para>Authentication Requirement</para>
+</listitem></itemizedlist>
+</para>
+</listitem><listitem><para>Configuration Settings</para>
+</listitem><listitem><para>Git Hooks<itemizedlist>
+<listitem><para>Post-Commit Hook</para>
+</listitem><listitem><para>Custom Hook Location</para>
+</listitem></itemizedlist>
+</para>
+</listitem><listitem><para>Advanced Use Cases<itemizedlist>
+<listitem><para>CI/CD Integration</para>
+</listitem><listitem><para>Remote Repository Documentation</para>
+</listitem></itemizedlist>
+</para>
+</listitem><listitem><para>Troubleshooting<itemizedlist>
+<listitem><para>Common Issues</para>
+</listitem><listitem><para>Logs</para>
+</listitem><listitem><para>Support</para>
+</listitem></itemizedlist>
+</para>
+</listitem></itemizedlist>
+</para>
+</listitem></itemizedlist>
+</para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md43">
+<title>Authentication</title>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md44">
+<title>Login Process</title>
+<para>When you run <computeroutput>penify login</computeroutput>, the tool:</para>
+<para><orderedlist>
+<listitem><para>Opens your default web browser</para>
+</listitem><listitem><para>Redirects you to Penify&apos;s login page</para>
+</listitem><listitem><para>Captures the authentication token after successful login</para>
+</listitem><listitem><para>Saves the token in <computeroutput>~/.penify</computeroutput> file</para>
+</listitem></orderedlist>
+</para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md45">
+<title>API Token Storage</title>
+<para>API tokens are stored in your home directory in the <computeroutput>.penify</computeroutput> file. This JSON file contains:</para>
+<para><programlisting filename=".json"><codeline><highlight class="normal">{</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>&quot;api_keys&quot;:<sp/>&quot;your-api-token&quot;,</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>&quot;llm&quot;:<sp/>{<sp/>&quot;model&quot;:<sp/>&quot;...&quot;,<sp/>&quot;api_base&quot;:<sp/>&quot;...&quot;,<sp/>&quot;api_key&quot;:<sp/>&quot;...&quot;<sp/>},</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>&quot;jira&quot;:<sp/>{<sp/>&quot;url&quot;:<sp/>&quot;...&quot;,<sp/>&quot;username&quot;:<sp/>&quot;...&quot;,<sp/>&quot;api_token&quot;:<sp/>&quot;...&quot;<sp/>}</highlight></codeline>
+<codeline><highlight class="normal">}</highlight></codeline>
+</programlisting></para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md46">
+<title>Token Precedence</title>
+<para><orderedlist>
+<listitem><para>Environment variable <computeroutput>PENIFY_API_TOKEN</computeroutput> (highest priority)</para>
+</listitem><listitem><para>Token in <computeroutput>~/.penify</computeroutput> file</para>
+</listitem></orderedlist>
+</para>
+</sect2>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md47">
+<title>Command Overview</title>
+<para><programlisting><codeline><highlight class="normal">penify</highlight></codeline>
+<codeline><highlight class="normal">├──<sp/>commit<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Generate<sp/>smart<sp/>commit<sp/>messages</highlight></codeline>
+<codeline><highlight class="normal">├──<sp/>config<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Configure<sp/>local<sp/>LLM<sp/>and<sp/>JIRA</highlight></codeline>
+<codeline><highlight class="normal">│<sp/><sp/><sp/>├──<sp/>llm<sp/><sp/><sp/><sp/><sp/><sp/><sp/>Configure<sp/>local<sp/>LLM<sp/>settings</highlight></codeline>
+<codeline><highlight class="normal">│<sp/><sp/><sp/>└──<sp/>jira<sp/><sp/><sp/><sp/><sp/><sp/>Configure<sp/>JIRA<sp/>integration</highlight></codeline>
+<codeline><highlight class="normal">├──<sp/>login<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Log<sp/>in<sp/>to<sp/>Penify<sp/>account</highlight></codeline>
+<codeline><highlight class="normal">└──<sp/>docgen<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Generate<sp/>code<sp/>documentation</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>├──<sp/>install-hook<sp/><sp/><sp/><sp/><sp/>Install<sp/>Git<sp/>post-commit<sp/>hook</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>└──<sp/>uninstall-hook<sp/><sp/><sp/>Remove<sp/>Git<sp/>post-commit<sp/>hook</highlight></codeline>
+</programlisting></para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md48">
+<title>Commit Message Generation</title>
+<para>The <computeroutput>commit</computeroutput> command analyzes your staged changes and generates meaningful commit messages. It can:</para>
+<para><itemizedlist>
+<listitem><para>Use a local LLM if configured</para>
+</listitem><listitem><para>Enhance messages with JIRA issue details</para>
+</listitem><listitem><para>Provide both title and description</para>
+</listitem></itemizedlist>
+</para>
+<para>For specific options and examples, see <ref refid="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands" kindref="compound">docs/commit-commands.md</ref>.</para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md49">
+<title>Code Documentation Generation</title>
+<para>The <computeroutput>docgen</computeroutput> command generates documentation for your code:</para>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md50">
+<title>Use Cases</title>
+<para><orderedlist>
+<listitem><para><bold>Current Git Diff</bold>: Default behavior, documents only changed files</para>
+</listitem><listitem><para><bold>Specific File</bold>: Pass a file path with <computeroutput>-l path/to/file.py</computeroutput></para>
+</listitem><listitem><para><bold>Entire Folder</bold>: Pass a folder path with <computeroutput>-l path/to/folder</computeroutput></para>
+</listitem></orderedlist>
+</para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md51">
+<title>Authentication Requirement</title>
+<para>This feature requires authentication with a Penify account. Run <computeroutput>penify login</computeroutput> before using documentation features.</para>
+</sect2>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md52">
+<title>Configuration Settings</title>
+<para>Configure local settings using the <computeroutput>config</computeroutput> command:</para>
+<para><itemizedlist>
+<listitem><para><bold>LLM Settings</bold>: Configure a local LLM for commit message generation</para>
+</listitem><listitem><para><bold>JIRA Settings</bold>: Set up JIRA integration for enhanced commit messages</para>
+</listitem></itemizedlist>
+</para>
+<para>For detailed configuration options, see <ref refid="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands" kindref="compound">docs/config-commands.md</ref>.</para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md53">
+<title>Git Hooks</title>
+<para>Penify can install Git hooks to automate documentation generation:</para>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md54">
+<title>Post-Commit Hook</title>
+<para><itemizedlist>
+<listitem><para><bold>Install</bold>: <computeroutput>penify docgen install-hook</computeroutput></para>
+</listitem><listitem><para><bold>What it does</bold>: Automatically generates documentation for changed files after each commit</para>
+</listitem><listitem><para><bold>Uninstall</bold>: <computeroutput>penify docgen uninstall-hook</computeroutput></para>
+</listitem></itemizedlist>
+</para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md55">
+<title>Custom Hook Location</title>
+<para>You can specify a custom location for Git hooks:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>docgen<sp/>install-hook<sp/>-l<sp/>/path/to/git/repo</highlight></codeline>
+</programlisting></para>
+</sect2>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md56">
+<title>Advanced Use Cases</title>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md57">
+<title>CI/CD Integration</title>
+<para>For CI/CD pipelines:</para>
+<para><orderedlist>
+<listitem><para>Set <computeroutput>PENIFY_API_TOKEN</computeroutput> as an environment variable</para>
+</listitem><listitem><para>Run commands without requiring interactive login</para>
+</listitem></orderedlist>
+</para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md58">
+<title>Remote Repository Documentation</title>
+<para>Generate documentation for an entire repository:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">git<sp/>clone<sp/>https://github.com/user/repo</highlight></codeline>
+<codeline><highlight class="normal">cd<sp/>repo</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>.</highlight></codeline>
+</programlisting></para>
+</sect2>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md59">
+<title>Troubleshooting</title>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md60">
+<title>Common Issues</title>
+<para><orderedlist>
+<listitem><para><bold>API Key Errors</bold>: Ensure you&apos;ve run <computeroutput>penify login</computeroutput> or set <computeroutput>PENIFY_API_TOKEN</computeroutput></para>
+</listitem><listitem><para><bold>LLM Configuration</bold>: Check your LLM settings with <computeroutput>cat ~/.penify</computeroutput></para>
+</listitem><listitem><para><bold>JIRA Integration</bold>: Verify JIRA credentials in your configuration</para>
+</listitem></orderedlist>
+</para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md61">
+<title>Logs</title>
+<para>For more detailed logs, you can set the environment variable:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">export<sp/>PENIFY_DEBUG=1</highlight></codeline>
+</programlisting></para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md62">
+<title>Support</title>
+<para>For additional help, visit <ulink url="https://docs.penify.dev/">https://docs.penify.dev/</ulink> or contact <ulink url="mailto:support@penify.dev">support@penify.dev</ulink> </para>
+</sect2>
+</sect1>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/detailed-usage.md"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.xml b/docs345/xml/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.xml
new file mode 100644
index 0000000..7107276
--- /dev/null
+++ b/docs345/xml/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.xml
@@ -0,0 +1,317 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands" kind="page">
+    <compoundname>md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands</compoundname>
+    <title>Penify CLI - Documentation Generation Commands</title>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+<para>This document provides a detailed guide to all permutations and combinations of the <computeroutput>docgen</computeroutput> command, including extensive information about Git hook commands for automating documentation generation.</para>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md64">
+<title>Table of Contents</title>
+<para><itemizedlist>
+<listitem><para>Basic Usage</para>
+</listitem><listitem><para>Command Options</para>
+</listitem><listitem><para>Option Combinations</para>
+</listitem><listitem><para>Git Hook Commands<itemizedlist>
+<listitem><para>Hook Installation</para>
+</listitem><listitem><para>Hook Customization</para>
+</listitem><listitem><para>Hook Uninstallation</para>
+</listitem></itemizedlist>
+</para>
+</listitem><listitem><para>Advanced Use Cases</para>
+</listitem><listitem><para>Troubleshooting</para>
+</listitem></itemizedlist>
+</para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md65">
+<title>Basic Usage</title>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>docgen</highlight></codeline>
+</programlisting></para>
+<para>By default, this command:<itemizedlist>
+<listitem><para>Analyzes the current Git diff (changes since last commit)</para>
+</listitem><listitem><para>Generates documentation for changed files only</para>
+</listitem><listitem><para>Requires authentication via <computeroutput>penify login</computeroutput></para>
+</listitem></itemizedlist>
+</para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md66">
+<title>Command Options</title>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md67">
+<title>&lt;tt&gt;-l, --location&lt;/tt&gt;</title>
+<para>Specify a target for documentation generation:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#<sp/>Generate<sp/>documentation<sp/>for<sp/>a<sp/>specific<sp/>file</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>path/to/file.py</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Generate<sp/>documentation<sp/>for<sp/>a<sp/>specific<sp/>folder</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>path/to/folder</highlight></codeline>
+</programlisting></para>
+<para>Without this flag, Penify analyzes only Git-tracked modified files.</para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md68">
+<title>Subcommands</title>
+<sect3 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md69">
+<title>&lt;tt&gt;install-hook&lt;/tt&gt;</title>
+<para>Install a Git post-commit hook to automatically generate documentation:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>docgen<sp/>install-hook</highlight></codeline>
+</programlisting></para>
+</sect3>
+<sect3 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md70">
+<title>&lt;tt&gt;uninstall-hook&lt;/tt&gt;</title>
+<para>Remove the Git post-commit hook:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>docgen<sp/>uninstall-hook</highlight></codeline>
+</programlisting></para>
+</sect3>
+</sect2>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md71">
+<title>Option Combinations</title>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md72">
+<title>Generate Documentation for Current Git Diff</title>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#<sp/>Basic<sp/>usage<sp/>-<sp/>current<sp/>Git<sp/>diff</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen</highlight></codeline>
+</programlisting></para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md73">
+<title>Generate Documentation for a Specific File</title>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#<sp/>Single<sp/>file<sp/>documentation</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>src/main.py</highlight></codeline>
+</programlisting></para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md74">
+<title>Generate Documentation for a Folder</title>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#<sp/>Folder<sp/>documentation</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>src/models/</highlight></codeline>
+</programlisting></para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md75">
+<title>Install Hook in Current Repository</title>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#<sp/>Install<sp/>hook<sp/>in<sp/>current<sp/>Git<sp/>repository</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>install-hook</highlight></codeline>
+</programlisting></para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md76">
+<title>Install Hook in Specific Repository</title>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#<sp/>Install<sp/>hook<sp/>in<sp/>a<sp/>specific<sp/>Git<sp/>repository</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>install-hook<sp/>-l<sp/>/path/to/repo</highlight></codeline>
+</programlisting></para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md77">
+<title>Uninstall Hook from Current Repository</title>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#<sp/>Uninstall<sp/>hook<sp/>from<sp/>current<sp/>Git<sp/>repository</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>uninstall-hook</highlight></codeline>
+</programlisting></para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md78">
+<title>Uninstall Hook from Specific Repository</title>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#<sp/>Uninstall<sp/>hook<sp/>from<sp/>a<sp/>specific<sp/>Git<sp/>repository</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>uninstall-hook<sp/>-l<sp/>/path/to/repo</highlight></codeline>
+</programlisting></para>
+</sect2>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md79">
+<title>Git Hook Commands</title>
+<para>Penify provides Git hook commands to automate documentation generation as part of your Git workflow.</para>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md80">
+<title>Hook Installation</title>
+<sect3 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md81">
+<title>How Hooks Work</title>
+<para>When you install a Git hook with <computeroutput>penify docgen install-hook</computeroutput>, Penify:</para>
+<para><orderedlist>
+<listitem><para>Creates a post-commit hook script in the <computeroutput>.git/hooks</computeroutput> directory</para>
+</listitem><listitem><para>Makes the script executable</para>
+</listitem><listitem><para>Configures the hook to run <computeroutput>penify docgen</computeroutput> after each commit</para>
+</listitem></orderedlist>
+</para>
+</sect3>
+<sect3 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md82">
+<title>Hook Script Content</title>
+<para>The generated post-commit hook contains:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#!/bin/sh</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>This<sp/>is<sp/>a<sp/>post-commit<sp/>hook<sp/>generated<sp/>by<sp/>penify.</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Automatically<sp/>generates<sp/>documentation<sp/>for<sp/>changed<sp/>files<sp/>after<sp/>each<sp/>commit.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-gf<sp/>/path/to/git/repository<sp/>-t<sp/>your_api_token</highlight></codeline>
+</programlisting></para>
+</sect3>
+<sect3 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md83">
+<title>Installation Location</title>
+<para>By default, hooks are installed in the current Git repository. You can specify a different location:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>docgen<sp/>install-hook<sp/>-l<sp/>/path/to/repo</highlight></codeline>
+</programlisting></para>
+</sect3>
+<sect3 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md84">
+<title>Installation Requirements</title>
+<para>To install hooks, you need:<itemizedlist>
+<listitem><para>A valid Penify API token (login first with <computeroutput>penify login</computeroutput>)</para>
+</listitem><listitem><para>Write permissions to the <computeroutput>.git/hooks</computeroutput> directory</para>
+</listitem></itemizedlist>
+</para>
+</sect3>
+<sect3 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md85">
+<title>Verifying Installation</title>
+<para>After installation, you can verify that the hook is installed:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">cat<sp/>.git/hooks/post-commit</highlight></codeline>
+</programlisting></para>
+</sect3>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md86">
+<title>Hook Customization</title>
+<para>You can customize the post-commit hook after installation:</para>
+<sect3 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md87">
+<title>Modifying Hook Behavior</title>
+<para><orderedlist>
+<listitem><para>Edit the <computeroutput>.git/hooks/post-commit</computeroutput> file</para>
+</listitem><listitem><para>Add additional options to the <computeroutput>penify docgen</computeroutput> command</para>
+</listitem><listitem><para>Add other commands to run after commit</para>
+</listitem></orderedlist>
+</para>
+<para>Example of a customized hook:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#!/bin/sh</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>This<sp/>is<sp/>a<sp/>post-commit<sp/>hook<sp/>generated<sp/>by<sp/>penify.</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Automatically<sp/>generates<sp/>documentation<sp/>for<sp/>changed<sp/>files<sp/>after<sp/>each<sp/>commit.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Generate<sp/>documentation</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-gf<sp/>/path/to/git/repository<sp/>-t<sp/>your_api_token</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Additional<sp/>custom<sp/>commands</highlight></codeline>
+<codeline><highlight class="normal">echo<sp/>&quot;Documentation<sp/>generation<sp/>complete!&quot;</highlight></codeline>
+</programlisting></para>
+</sect3>
+<sect3 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md88">
+<title>Advanced Hook Scenarios</title>
+<para><bold>Conditional Documentation Generation</bold>:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#!/bin/sh</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Only<sp/>generate<sp/>documentation<sp/>for<sp/>commits<sp/>to<sp/>the<sp/>main<sp/>branch</highlight></codeline>
+<codeline><highlight class="normal">BRANCH=$(git<sp/>rev-parse<sp/>--abbrev-ref<sp/>HEAD)</highlight></codeline>
+<codeline><highlight class="normal">if<sp/>[<sp/>&quot;$BRANCH&quot;<sp/>=<sp/>&quot;main&quot;<sp/>];<sp/>then</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>penify<sp/>docgen<sp/>-gf<sp/>/path/to/git/repository<sp/>-t<sp/>your_api_token</highlight></codeline>
+<codeline><highlight class="normal">fi</highlight></codeline>
+</programlisting></para>
+<para><bold>Documenting Specific Files/Folders</bold>:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#!/bin/sh</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Only<sp/>document<sp/>Python<sp/>files<sp/>in<sp/>the<sp/>src<sp/>directory</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>src/<sp/>-gf<sp/>/path/to/git/repository<sp/>-t<sp/>your_api_token</highlight></codeline>
+</programlisting></para>
+</sect3>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md89">
+<title>Hook Uninstallation</title>
+<sect3 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md90">
+<title>Standard Uninstallation</title>
+<para>To remove a hook from the current repository:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>docgen<sp/>uninstall-hook</highlight></codeline>
+</programlisting></para>
+</sect3>
+<sect3 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md91">
+<title>Specific Repository Uninstallation</title>
+<para>To remove a hook from a specific repository:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>docgen<sp/>uninstall-hook<sp/>-l<sp/>/path/to/repo</highlight></codeline>
+</programlisting></para>
+</sect3>
+<sect3 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md92">
+<title>Manual Hook Removal</title>
+<para>If needed, you can manually remove the hook:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">rm<sp/>.git/hooks/post-commit</highlight></codeline>
+</programlisting></para>
+</sect3>
+<sect3 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md93">
+<title>Verifying Uninstallation</title>
+<para>Check that the hook was successfully removed:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">ls<sp/>-la<sp/>.git/hooks/post-commit<sp/><sp/>#<sp/>Should<sp/>return<sp/>&quot;No<sp/>such<sp/>file<sp/>or<sp/>directory&quot;</highlight></codeline>
+</programlisting></para>
+</sect3>
+</sect2>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md94">
+<title>Advanced Use Cases</title>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md95">
+<title>Continuous Integration</title>
+<para>Run documentation generation in CI pipelines:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#<sp/>In<sp/>your<sp/>CI<sp/>script</highlight></codeline>
+<codeline><highlight class="normal">export<sp/>PENIFY_API_TOKEN=your_api_token</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>src/</highlight></codeline>
+</programlisting></para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md96">
+<title>Batch Documentation</title>
+<para>Generate documentation for multiple repositories:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#<sp/>Bash<sp/>script<sp/>for<sp/>batch<sp/>documentation</highlight></codeline>
+<codeline><highlight class="normal">for<sp/>repo<sp/>in<sp/>repo1<sp/>repo2<sp/>repo3;<sp/>do</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>cd<sp/>/path/to/$repo</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>penify<sp/>docgen<sp/>-l<sp/>.</highlight></codeline>
+<codeline><highlight class="normal">done</highlight></codeline>
+</programlisting></para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md97">
+<title>Custom Git Hook Integration</title>
+<para>Integrate with other Git hooks:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#<sp/>In<sp/>.git/hooks/pre-push</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>src/</highlight></codeline>
+</programlisting></para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md98">
+<title>Documenting Release Tags</title>
+<para>Generate documentation when creating a release tag:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#<sp/>Document<sp/>everything<sp/>when<sp/>creating<sp/>a<sp/>tag</highlight></codeline>
+<codeline><highlight class="normal">git<sp/>tag<sp/>-a<sp/>v1.0.0</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>.<sp/><sp/>#<sp/>Document<sp/>entire<sp/>codebase</highlight></codeline>
+<codeline><highlight class="normal">git<sp/>commit<sp/>--amend<sp/>-m<sp/>&quot;Release<sp/>v1.0.0<sp/>with<sp/>updated<sp/>documentation&quot;</highlight></codeline>
+</programlisting></para>
+</sect2>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md99">
+<title>Troubleshooting</title>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md100">
+<title>Common Issues</title>
+<para><orderedlist>
+<listitem><para>**&quot;Authentication required&quot;**<itemizedlist>
+<listitem><para>Run <computeroutput>penify login</computeroutput> before using documentation features</para>
+</listitem><listitem><para>Check your API token with <computeroutput>cat ~/.penify</computeroutput></para>
+</listitem></itemizedlist>
+</para>
+</listitem><listitem><para>**&quot;Permission denied when installing hook&quot;**<itemizedlist>
+<listitem><para>Check Git repository permissions</para>
+</listitem><listitem><para>Try running with sudo (if appropriate for your environment)</para>
+</listitem><listitem><para>Ensure the <computeroutput>.git/hooks</computeroutput> directory exists</para>
+</listitem></itemizedlist>
+</para>
+</listitem><listitem><para>**&quot;Hook installed but not running&quot;**<itemizedlist>
+<listitem><para>Check if the hook is executable: <computeroutput>ls -la .git/hooks/post-commit</computeroutput></para>
+</listitem><listitem><para>Make it executable if needed: <computeroutput>chmod +x .git/hooks/post-commit</computeroutput></para>
+</listitem><listitem><para>Check for syntax errors in the hook script</para>
+</listitem></itemizedlist>
+</para>
+</listitem><listitem><para>**&quot;File or directory not found&quot;**<itemizedlist>
+<listitem><para>Verify the path provided to the <computeroutput>-l</computeroutput> option</para>
+</listitem><listitem><para>Ensure you&apos;re running the command from the correct directory</para>
+</listitem></itemizedlist>
+</para>
+</listitem><listitem><para>**&quot;Hook uninstallation failed&quot;**<itemizedlist>
+<listitem><para>Check permissions on the <computeroutput>.git/hooks</computeroutput> directory</para>
+</listitem><listitem><para>Try manual removal: <computeroutput>rm .git/hooks/post-commit</computeroutput></para>
+</listitem></itemizedlist>
+</para>
+</listitem></orderedlist>
+</para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md101">
+<title>Debugging</title>
+<para>For detailed output when running documentation commands:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">export<sp/>PENIFY_DEBUG=1</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>src/</highlight></codeline>
+</programlisting></para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md102">
+<title>Getting Help</title>
+<para>For command-specific help:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>docgen<sp/>--help</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>install-hook<sp/>--help</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>uninstall-hook<sp/>--help</highlight></codeline>
+</programlisting> </para>
+</sect2>
+</sect1>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/doc_commands.md"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows.xml b/docs345/xml/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows.xml
new file mode 100644
index 0000000..2e80f2e
--- /dev/null
+++ b/docs345/xml/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows.xml
@@ -0,0 +1,161 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows" kind="page">
+    <compoundname>md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows</compoundname>
+    <title>Penify CLI Example Workflows</title>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+<para>This document demonstrates how to use Penify CLI in real-world development workflows to improve your productivity.</para>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md104">
+<title>Workflow 1: Efficient Git Commits with AI</title>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md105">
+<title>Setup</title>
+<para>First, configure your local LLM for offline operation:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>config<sp/>llm</highlight></codeline>
+</programlisting></para>
+<para>Configure your JIRA integration for enhanced commit messages:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>config<sp/>jira</highlight></codeline>
+</programlisting></para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md106">
+<title>Daily Workflow</title>
+<para><orderedlist>
+<listitem><para>Make your code changes as usual</para>
+</listitem><listitem><para>When ready to commit, use Penify to generate a smart commit message:</para>
+</listitem></orderedlist>
+</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>commit</highlight></codeline>
+</programlisting></para>
+<para><orderedlist>
+<listitem><para>Review and confirm the generated commit message</para>
+</listitem><listitem><para>Git commit and push as usual</para>
+</listitem></orderedlist>
+</para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md107">
+<title>Benefits</title>
+<para><itemizedlist>
+<listitem><para>Consistent and descriptive commit messages</para>
+</listitem><listitem><para>Automatic inclusion of relevant JIRA ticket information</para>
+</listitem><listitem><para>Time saved from writing detailed commit messages</para>
+</listitem></itemizedlist>
+</para>
+</sect2>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md108">
+<title>Workflow 2: Documentation Generation Pipeline</title>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md109">
+<title>Setup</title>
+<para>Login to Penify to access advanced documentation features:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>login</highlight></codeline>
+</programlisting></para>
+<para>Install the Git hook for automatic documentation generation:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>docgen<sp/>install-hook</highlight></codeline>
+</programlisting></para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md110">
+<title>Daily Workflow</title>
+<para><orderedlist>
+<listitem><para>Make your code changes as usual</para>
+</listitem><listitem><para>Commit your changes</para>
+</listitem><listitem><para>Documentation is automatically generated for changed files</para>
+</listitem><listitem><para>Review the generated documentation</para>
+</listitem></orderedlist>
+</para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md111">
+<title>Manual Documentation</title>
+<para>For specific files or folders:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>src/components/authentication</highlight></codeline>
+</programlisting></para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md112">
+<title>Benefits</title>
+<para><itemizedlist>
+<listitem><para>Always up-to-date documentation</para>
+</listitem><listitem><para>Consistent documentation style</para>
+</listitem><listitem><para>Time saved from writing detailed documentation</para>
+</listitem></itemizedlist>
+</para>
+</sect2>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md113">
+<title>Workflow 3: Code Review Enhancement</title>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md114">
+<title>Setup</title>
+<para>Ensure you&apos;re logged into Penify:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>login</highlight></codeline>
+</programlisting></para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md115">
+<title>Workflow</title>
+<para><orderedlist>
+<listitem><para>Before submitting a PR, generate documentation for changed files:</para>
+</listitem></orderedlist>
+</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>docgen</highlight></codeline>
+</programlisting></para>
+<para><orderedlist>
+<listitem><para>Include the generated documentation in your PR</para>
+</listitem><listitem><para>Reviewers can better understand your changes with the AI-generated explanations</para>
+</listitem></orderedlist>
+</para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md116">
+<title>Benefits</title>
+<para><itemizedlist>
+<listitem><para>Improved PR quality</para>
+</listitem><listitem><para>Faster code reviews</para>
+</listitem><listitem><para>Better team understanding of code changes</para>
+</listitem></itemizedlist>
+</para>
+</sect2>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md117">
+<title>Workflow 4: Onboarding New Team Members</title>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md118">
+<title>For Team Leads</title>
+<para>Generate comprehensive documentation for the entire codebase:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>.</highlight></codeline>
+</programlisting></para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md119">
+<title>For New Team Members</title>
+<para>Generate focused documentation for components you&apos;re working on:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>src/components/my-feature</highlight></codeline>
+</programlisting></para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md120">
+<title>Benefits</title>
+<para><itemizedlist>
+<listitem><para>Faster onboarding</para>
+</listitem><listitem><para>Better understanding of code structure</para>
+</listitem><listitem><para>Reduced questions to senior team members</para>
+</listitem></itemizedlist>
+</para>
+</sect2>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md121">
+<title>Workflow 5: Legacy Code Understanding</title>
+<para>When working with unfamiliar legacy code:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#<sp/>Document<sp/>a<sp/>specific<sp/>complex<sp/>file</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>src/legacy/complex_module.py</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Document<sp/>an<sp/>entire<sp/>legacy<sp/>component</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>src/legacy/old_component</highlight></codeline>
+</programlisting></para>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md122">
+<title>Benefits</title>
+<para><itemizedlist>
+<listitem><para>Quickly understand complex legacy systems</para>
+</listitem><listitem><para>Reduce time spent deciphering undocumented code</para>
+</listitem><listitem><para>Make safer changes to legacy systems </para>
+</listitem></itemizedlist>
+</para>
+</sect2>
+</sect1>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/example-workflows.md"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/namespacepenify__hook.xml b/docs345/xml/namespacepenify__hook.xml
new file mode 100644
index 0000000..2d5d9d8
--- /dev/null
+++ b/docs345/xml/namespacepenify__hook.xml
@@ -0,0 +1,26 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacepenify__hook" kind="namespace" language="Python">
+    <compoundname>penify_hook</compoundname>
+    <innernamespace refid="namespacepenify__hook_1_1api__client">penify_hook::api_client</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1base__analyzer">penify_hook::base_analyzer</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1commands">penify_hook::commands</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1commit__analyzer">penify_hook::commit_analyzer</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1config__command">penify_hook::config_command</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1constants">penify_hook::constants</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1file__analyzer">penify_hook::file_analyzer</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1folder__analyzer">penify_hook::folder_analyzer</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1git__analyzer">penify_hook::git_analyzer</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1jira__client">penify_hook::jira_client</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1llm__client">penify_hook::llm_client</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1login__command">penify_hook::login_command</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1main">penify_hook::main</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1ui__utils">penify_hook::ui_utils</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1utils">penify_hook::utils</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/namespacepenify__hook_1_1api__client.xml b/docs345/xml/namespacepenify__hook_1_1api__client.xml
new file mode 100644
index 0000000..763c4c4
--- /dev/null
+++ b/docs345/xml/namespacepenify__hook_1_1api__client.xml
@@ -0,0 +1,12 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacepenify__hook_1_1api__client" kind="namespace" language="Python">
+    <compoundname>penify_hook::api_client</compoundname>
+    <innerclass refid="classpenify__hook_1_1api__client_1_1APIClient" prot="public">penify_hook::api_client::APIClient</innerclass>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/namespacepenify__hook_1_1base__analyzer.xml b/docs345/xml/namespacepenify__hook_1_1base__analyzer.xml
new file mode 100644
index 0000000..82a8bc2
--- /dev/null
+++ b/docs345/xml/namespacepenify__hook_1_1base__analyzer.xml
@@ -0,0 +1,12 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacepenify__hook_1_1base__analyzer" kind="namespace" language="Python">
+    <compoundname>penify_hook::base_analyzer</compoundname>
+    <innerclass refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer" prot="public">penify_hook::base_analyzer::BaseAnalyzer</innerclass>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/base_analyzer.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/namespacepenify__hook_1_1commands.xml b/docs345/xml/namespacepenify__hook_1_1commands.xml
new file mode 100644
index 0000000..4abe35e
--- /dev/null
+++ b/docs345/xml/namespacepenify__hook_1_1commands.xml
@@ -0,0 +1,16 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacepenify__hook_1_1commands" kind="namespace" language="Python">
+    <compoundname>penify_hook::commands</compoundname>
+    <innernamespace refid="namespacepenify__hook_1_1commands_1_1auth__commands">penify_hook::commands::auth_commands</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1commands_1_1commit__commands">penify_hook::commands::commit_commands</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1commands_1_1config__commands">penify_hook::commands::config_commands</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1commands_1_1doc__commands">penify_hook::commands::doc_commands</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1commands_1_1hook__commands">penify_hook::commands::hook_commands</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/__init__.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/namespacepenify__hook_1_1commands_1_1auth__commands.xml b/docs345/xml/namespacepenify__hook_1_1commands_1_1auth__commands.xml
new file mode 100644
index 0000000..32d304a
--- /dev/null
+++ b/docs345/xml/namespacepenify__hook_1_1commands_1_1auth__commands.xml
@@ -0,0 +1,82 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacepenify__hook_1_1commands_1_1auth__commands" kind="namespace" language="Python">
+    <compoundname>penify_hook::commands::auth_commands</compoundname>
+      <sectiondef kind="func">
+      <memberdef kind="function" id="namespacepenify__hook_1_1commands_1_1auth__commands_1aa3956ca1749d4218ea1dc6e5b6218b24" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.commands.auth_commands.save_credentials</definition>
+        <argsstring>(api_key)</argsstring>
+        <name>save_credentials</name>
+        <qualifiedname>penify_hook.commands.auth_commands.save_credentials</qualifiedname>
+        <param>
+          <type>api_key</type>
+          <defname>api_key</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Save the token and API keys based on priority:
+1. .env file in Git repo root (if in a git repo)
+2. .penify file in home directory (global fallback)
+
+Args:
+    api_key: The API key to save
+    
+Returns:
+    bool: True if saved successfully, False otherwise
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/auth_commands.py" line="11" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/auth_commands.py" bodystart="11" bodyend="81"/>
+        <references refid="namespacepenify__hook_1_1utils_1a95c3f9c80860d6a2e2d061d2fb660a3f" compoundref="utils_8py" startline="62" endline="72">penify_hook.utils.recursive_search_git_folder</references>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1auth__commands_1a78f375c58bb6f69f98675e6a9ac84655" compoundref="auth__commands_8py" startline="82" endline="181">penify_hook.commands.auth_commands.login</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1commands_1_1auth__commands_1a78f375c58bb6f69f98675e6a9ac84655" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.commands.auth_commands.login</definition>
+        <argsstring>(api_url, dashboard_url)</argsstring>
+        <name>login</name>
+        <qualifiedname>penify_hook.commands.auth_commands.login</qualifiedname>
+        <param>
+          <type>api_url</type>
+          <defname>api_url</defname>
+        </param>
+        <param>
+          <type>dashboard_url</type>
+          <defname>dashboard_url</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Open the login page in a web browser and listen for the redirect URL to
+capture the token.
+
+This function generates a random redirect port, constructs the full
+login URL with the provided dashboard URL, opens the login page in the
+default web browser, and sets up a simple HTTP server to listen for the
+redirect. Upon receiving the redirect, it extracts the token from the
+query parameters, fetches API keys using the token, saves them if
+successful, and handles login failures by notifying the user.
+
+Args:
+    api_url (str): The URL of the API service to fetch API keys.
+    dashboard_url (str): The URL of the dashboard where the user will be redirected after logging
+        in.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/auth_commands.py" line="82" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/auth_commands.py" bodystart="82" bodyend="181"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1auth__commands_1aa3956ca1749d4218ea1dc6e5b6218b24" compoundref="auth__commands_8py" startline="11" endline="81">penify_hook.commands.auth_commands.save_credentials</references>
+        <referencedby refid="namespacepenify__hook_1_1login__command_1ae4bf932fbafeff834b0a0c5a37f74ccd" compoundref="login__command_8py" startline="5" endline="26">penify_hook.login_command.handle_login</referencedby>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/auth_commands.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/namespacepenify__hook_1_1commands_1_1commit__commands.xml b/docs345/xml/namespacepenify__hook_1_1commands_1_1commit__commands.xml
new file mode 100644
index 0000000..1179792
--- /dev/null
+++ b/docs345/xml/namespacepenify__hook_1_1commands_1_1commit__commands.xml
@@ -0,0 +1,176 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacepenify__hook_1_1commands_1_1commit__commands" kind="namespace" language="Python">
+    <compoundname>penify_hook::commands::commit_commands</compoundname>
+      <sectiondef kind="func">
+      <memberdef kind="function" id="namespacepenify__hook_1_1commands_1_1commit__commands_1a62564c4e8ad59fc46d56cb0f9122a71a" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.commands.commit_commands.commit_code</definition>
+        <argsstring>(api_url, token, message, open_terminal, generate_description, llm_model=None, llm_api_base=None, llm_api_key=None, jira_url=None, jira_user=None, jira_api_token=None)</argsstring>
+        <name>commit_code</name>
+        <qualifiedname>penify_hook.commands.commit_commands.commit_code</qualifiedname>
+        <param>
+          <type>api_url</type>
+          <defname>api_url</defname>
+        </param>
+        <param>
+          <type>token</type>
+          <defname>token</defname>
+        </param>
+        <param>
+          <type>message</type>
+          <defname>message</defname>
+        </param>
+        <param>
+          <type>open_terminal</type>
+          <defname>open_terminal</defname>
+        </param>
+        <param>
+          <type>generate_description</type>
+          <defname>generate_description</defname>
+        </param>
+        <param>
+          <type>llm_model</type>
+          <defname>llm_model</defname>
+          <defval>None</defval>
+        </param>
+        <param>
+          <type>llm_api_base</type>
+          <defname>llm_api_base</defname>
+          <defval>None</defval>
+        </param>
+        <param>
+          <type>llm_api_key</type>
+          <defname>llm_api_key</defname>
+          <defval>None</defval>
+        </param>
+        <param>
+          <type>jira_url</type>
+          <defname>jira_url</defname>
+          <defval>None</defval>
+        </param>
+        <param>
+          <type>jira_user</type>
+          <defname>jira_user</defname>
+          <defval>None</defval>
+        </param>
+        <param>
+          <type>jira_api_token</type>
+          <defname>jira_api_token</defname>
+          <defval>None</defval>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Enhance Git commits with AI-powered commit messages.
+
+This function allows for the generation of enhanced commit messages
+using natural language processing models and optionally integrates with
+JIRA for additional context. It processes the current Git folder to find
+relevant files and generates a detailed commit message based on the
+provided parameters.
+
+Args:
+    api_url (str): URL of the API endpoint.
+    token (str): Authentication token for the API.
+    message (str): Initial commit message provided by the user.
+    open_terminal (bool): Whether to open the terminal after committing.
+    generate_description (bool): Whether to generate a detailed description in the commit message.
+    llm_model (str?): The language model to use for generating the commit message. Defaults to
+        None.
+    llm_api_base (str?): Base URL of the LLM API. Defaults to None.
+    llm_api_key (str?): API key for accessing the LLM service. Defaults to None.
+    jira_url (str?): URL of the JIRA instance. Defaults to None.
+    jira_user (str?): Username for authenticating with JIRA. Defaults to None.
+    jira_api_token (str?): API token for accessing JIRA. Defaults to None.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/commit_commands.py" line="8" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/commit_commands.py" bodystart="10" bodyend="99"/>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a6f0acd7dd91abfe67d0807803bc3b65f" compoundref="ui__utils_8py" startline="144" endline="155">penify_hook.ui_utils.print_error</references>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" compoundref="ui__utils_8py" startline="108" endline="119">penify_hook.ui_utils.print_info</references>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a1ffbb9671dbe233770268e2dd66a67fa" compoundref="ui__utils_8py" startline="132" endline="143">penify_hook.ui_utils.print_warning</references>
+        <references refid="namespacepenify__hook_1_1utils_1a95c3f9c80860d6a2e2d061d2fb660a3f" compoundref="utils_8py" startline="62" endline="72">penify_hook.utils.recursive_search_git_folder</references>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1commit__commands_1af4f739f524c38b437e4e47673d683e23" compoundref="commit__commands_8py" startline="128" endline="169">penify_hook.commands.commit_commands.handle_commit</referencedby>
+        <referencedby refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a43c2ff3707124aa48e8eb581106b8691" compoundref="test__commit__commands_8py" startline="324" endline="358">tests.test_commit_commands.TestCommitCommands.test_commit_code_error_handling</referencedby>
+        <referencedby refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1af9c09013055ec39ddde86b487aefcf8b" compoundref="test__commit__commands_8py" startline="201" endline="260">tests.test_commit_commands.TestCommitCommands.test_commit_code_with_jira_client</referencedby>
+        <referencedby refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1acea0d934ee0f2b914b0b893736e8fe4e" compoundref="test__commit__commands_8py" startline="270" endline="317">tests.test_commit_commands.TestCommitCommands.test_commit_code_with_jira_connection_failure</referencedby>
+        <referencedby refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1acc4b1e4189792a3f7c11d2a745f479c0" compoundref="test__commit__commands_8py" startline="140" endline="190">tests.test_commit_commands.TestCommitCommands.test_commit_code_with_llm_client</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1commands_1_1commit__commands_1a8627583116eb78e31a4d3cdc16d2f15c" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.commands.commit_commands.setup_commit_parser</definition>
+        <argsstring>(parser)</argsstring>
+        <name>setup_commit_parser</name>
+        <qualifiedname>penify_hook.commands.commit_commands.setup_commit_parser</qualifiedname>
+        <param>
+          <type>parser</type>
+          <defname>parser</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Generates a parser for setting up a command to generate smart commit
+messages.
+
+This function sets up an argument parser that can be used to generate
+commit messages with contextual information. It allows users to specify
+options such as including a message, opening an edit terminal before
+committing, and generating a detailed commit message.
+
+Args:
+    parser (argparse.ArgumentParser): The ArgumentParser object to be configured.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/commit_commands.py" line="100" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/commit_commands.py" bodystart="100" bodyend="127"/>
+        <referencedby refid="namespacepenify__hook_1_1main_1a16838b20df4bd14ee4b5e1dd2906738f" compoundref="main_8py" startline="6" endline="87">penify_hook.main.main</referencedby>
+        <referencedby refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a4d04b125e102190a768f65f1948f15bc" compoundref="test__commit__commands_8py" startline="359" endline="382">tests.test_commit_commands.TestCommitCommands.test_setup_commit_parser</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1commands_1_1commit__commands_1af4f739f524c38b437e4e47673d683e23" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.commands.commit_commands.handle_commit</definition>
+        <argsstring>(args)</argsstring>
+        <name>handle_commit</name>
+        <qualifiedname>penify_hook.commands.commit_commands.handle_commit</qualifiedname>
+        <param>
+          <type>args</type>
+          <defname>args</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Handle the commit functionality by processing arguments and invoking the
+appropriate commands.
+
+This function processes the provided command-line arguments to configure
+settings for commit operations, including LLM (Language Model) and Jira
+configurations. It then calls the `commit_code` function with these
+configurations to perform the actual commit operation.
+
+Args:
+    args (argparse.Namespace): The parsed command-line arguments containing options like terminal,
+        description, message, etc.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/commit_commands.py" line="128" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/commit_commands.py" bodystart="128" bodyend="169"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1commit__commands_1a62564c4e8ad59fc46d56cb0f9122a71a" compoundref="commit__commands_8py" startline="10" endline="99">penify_hook.commands.commit_commands.commit_code</references>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a15bf3685c4dcb5c15ba6a4055e484cf2" compoundref="config__commands_8py" startline="264" endline="292">penify_hook.commands.config_commands.get_jira_config</references>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a6492bc8e7df6e38bb06ad05e572d4cc0" compoundref="config__commands_8py" startline="235" endline="263">penify_hook.commands.config_commands.get_llm_config</references>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a5503d51c905e2f1b299b12d2a73bd812" compoundref="config__commands_8py" startline="553" endline="582">penify_hook.commands.config_commands.get_token</references>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" compoundref="ui__utils_8py" startline="108" endline="119">penify_hook.ui_utils.print_info</references>
+        <referencedby refid="namespacepenify__hook_1_1main_1a16838b20df4bd14ee4b5e1dd2906738f" compoundref="main_8py" startline="6" endline="87">penify_hook.main.main</referencedby>
+        <referencedby refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1ac13e368262340af98b30fd8ebdac6597" compoundref="test__commit__commands_8py" startline="390" endline="435">tests.test_commit_commands.TestCommitCommands.test_handle_commit</referencedby>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/commit_commands.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/namespacepenify__hook_1_1commands_1_1config__commands.xml b/docs345/xml/namespacepenify__hook_1_1commands_1_1config__commands.xml
new file mode 100644
index 0000000..87c5934
--- /dev/null
+++ b/docs345/xml/namespacepenify__hook_1_1commands_1_1config__commands.xml
@@ -0,0 +1,349 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacepenify__hook_1_1commands_1_1config__commands" kind="namespace" language="Python">
+    <compoundname>penify_hook::commands::config_commands</compoundname>
+      <sectiondef kind="var">
+      <memberdef kind="variable" id="namespacepenify__hook_1_1commands_1_1config__commands_1a152642ab83cf6219b604bda6122aba67" prot="public" static="no" mutable="no">
+        <type>bool</type>
+        <definition>bool penify_hook::commands::config_commands::DOTENV_AVAILABLE</definition>
+        <argsstring></argsstring>
+        <name>DOTENV_AVAILABLE</name>
+        <qualifiedname>penify_hook.commands.config_commands.DOTENV_AVAILABLE</qualifiedname>
+        <initializer>=  True</initializer>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" line="17" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" bodystart="17" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacepenify__hook_1_1commands_1_1config__commands_1a4b202072a3a3b8515c9c254622e9c880" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook::commands::config_commands.path</definition>
+        <argsstring></argsstring>
+        <name>path</name>
+        <qualifiedname>penify_hook.commands.config_commands.path</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" line="321" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" bodystart="321" bodyend="-1"/>
+      </memberdef>
+      </sectiondef>
+      <sectiondef kind="func">
+      <memberdef kind="function" id="namespacepenify__hook_1_1commands_1_1config__commands_1aabe277132ce0bc0aacef951cf1dee2ae" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>None</type>
+        <definition> None penify_hook.commands.config_commands.load_env_files</definition>
+        <argsstring>()</argsstring>
+        <name>load_env_files</name>
+        <qualifiedname>penify_hook.commands.config_commands.load_env_files</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Load environment variables from .env files in various locations,
+with proper priority (later files override earlier ones):
+1. User home directory .env (lowest priority)
+2. Git repo root directory .env (if in a git repo)
+3. Current directory .env (highest priority)
+
+This function is called when the module is imported, ensuring env variables
+are available throughout the application lifecycle.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" line="22" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" bodystart="22" bodyend="64"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1aabe277132ce0bc0aacef951cf1dee2ae" compoundref="config__commands_8py" startline="22" endline="64">penify_hook.commands.config_commands.load_env_files</references>
+        <references refid="namespacepenify__hook_1_1utils_1a95c3f9c80860d6a2e2d061d2fb660a3f" compoundref="utils_8py" startline="62" endline="72">penify_hook.utils.recursive_search_git_folder</references>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1config__commands_1a15bf3685c4dcb5c15ba6a4055e484cf2" compoundref="config__commands_8py" startline="264" endline="292">penify_hook.commands.config_commands.get_jira_config</referencedby>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1config__commands_1a6492bc8e7df6e38bb06ad05e572d4cc0" compoundref="config__commands_8py" startline="235" endline="263">penify_hook.commands.config_commands.get_llm_config</referencedby>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1config__commands_1a5503d51c905e2f1b299b12d2a73bd812" compoundref="config__commands_8py" startline="553" endline="582">penify_hook.commands.config_commands.get_token</referencedby>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1config__commands_1aabe277132ce0bc0aacef951cf1dee2ae" compoundref="config__commands_8py" startline="22" endline="64">penify_hook.commands.config_commands.load_env_files</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1commands_1_1config__commands_1a6559a82d0bf727703d550d1003d3ed20" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>Path</type>
+        <definition> Path penify_hook.commands.config_commands.get_penify_config</definition>
+        <argsstring>()</argsstring>
+        <name>get_penify_config</name>
+        <qualifiedname>penify_hook.commands.config_commands.get_penify_config</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Get the home directory for the .penify configuration file.
+
+This function searches for the `.penify` file in the current directory
+and its parent directories until it finds it or reaches the home
+directory. If not found, it creates the `.penify` directory and an empty
+`config.json` file.
+
+Returns:
+    Path: The path to the `config.json` file within the `.penify` directory.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" line="68" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" bodystart="68" bodyend="104"/>
+        <references refid="namespacepenify__hook_1_1utils_1a95c3f9c80860d6a2e2d061d2fb660a3f" compoundref="utils_8py" startline="62" endline="72">penify_hook.utils.recursive_search_git_folder</references>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1config__commands_1a5503d51c905e2f1b299b12d2a73bd812" compoundref="config__commands_8py" startline="553" endline="582">penify_hook.commands.config_commands.get_token</referencedby>
+        <referencedby refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a2e8162082bcdd5652bb37bdb14cf453a" compoundref="test__config__commands_8py" startline="22" endline="55">tests.test_config_commands.TestConfigCommands.test_get_penify_config_existing_dir</referencedby>
+        <referencedby refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a33d4760eee3b67e1cde3aed755ebb948" compoundref="test__config__commands_8py" startline="60" endline="94">tests.test_config_commands.TestConfigCommands.test_get_penify_config_new_dir</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1commands_1_1config__commands_1a3caf2b062dd33b1f1d7ddc7224f0ff87" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>Any</type>
+        <definition> Any penify_hook.commands.config_commands.get_env_var_or_default</definition>
+        <argsstring>(str env_var, Any default=None)</argsstring>
+        <name>get_env_var_or_default</name>
+        <qualifiedname>penify_hook.commands.config_commands.get_env_var_or_default</qualifiedname>
+        <param>
+          <type>str</type>
+          <declname>env_var</declname>
+        </param>
+        <param>
+          <type>Any</type>
+          <declname>default</declname>
+          <defval>None</defval>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Get environment variable or return default value.
+
+Args:
+    env_var: The environment variable name
+    default: Default value if environment variable is not set
+    
+Returns:
+    Value of the environment variable or default
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" line="105" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" bodystart="105" bodyend="118"/>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1config__commands_1a15bf3685c4dcb5c15ba6a4055e484cf2" compoundref="config__commands_8py" startline="264" endline="292">penify_hook.commands.config_commands.get_jira_config</referencedby>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1config__commands_1a6492bc8e7df6e38bb06ad05e572d4cc0" compoundref="config__commands_8py" startline="235" endline="263">penify_hook.commands.config_commands.get_llm_config</referencedby>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1config__commands_1a5503d51c905e2f1b299b12d2a73bd812" compoundref="config__commands_8py" startline="553" endline="582">penify_hook.commands.config_commands.get_token</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1commands_1_1config__commands_1a4617bc5956e502c9555dc0dda0376df4" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.commands.config_commands.save_llm_config</definition>
+        <argsstring>(model, api_base, api_key)</argsstring>
+        <name>save_llm_config</name>
+        <qualifiedname>penify_hook.commands.config_commands.save_llm_config</qualifiedname>
+        <param>
+          <type>model</type>
+          <defname>model</defname>
+        </param>
+        <param>
+          <type>api_base</type>
+          <defname>api_base</defname>
+        </param>
+        <param>
+          <type>api_key</type>
+          <defname>api_key</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Save LLM configuration settings to .env file.
+
+This function saves LLM configuration in the following priority:
+1. Git repo root .env (if inside a git repo)
+2. User home directory .env
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" line="119" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" bodystart="119" bodyend="176"/>
+        <references refid="namespacepenify__hook_1_1utils_1a95c3f9c80860d6a2e2d061d2fb660a3f" compoundref="utils_8py" startline="62" endline="72">penify_hook.utils.recursive_search_git_folder</references>
+        <referencedby refid="namespacepenify__hook_1_1config__command_1a240e5331681eb574ac319d7458783bde" compoundref="config__command_8py" startline="41" endline="98">penify_hook.config_command.handle_config</referencedby>
+        <referencedby refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a73a264dfb21e16003e095b79f6eab2ac" compoundref="test__config__commands_8py" startline="269" endline="300">tests.test_config_commands.TestConfigCommands.test_save_llm_config_failure</referencedby>
+        <referencedby refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1acd8df8219441b9e9871b903a681400d9" compoundref="test__config__commands_8py" startline="227" endline="265">tests.test_config_commands.TestConfigCommands.test_save_llm_config_success</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1commands_1_1config__commands_1ab2486ac2bf16b4a671e49625bfa4f9b4" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.commands.config_commands.save_jira_config</definition>
+        <argsstring>(url, username, api_token)</argsstring>
+        <name>save_jira_config</name>
+        <qualifiedname>penify_hook.commands.config_commands.save_jira_config</qualifiedname>
+        <param>
+          <type>url</type>
+          <defname>url</defname>
+        </param>
+        <param>
+          <type>username</type>
+          <defname>username</defname>
+        </param>
+        <param>
+          <type>api_token</type>
+          <defname>api_token</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Save JIRA configuration settings to .env file.
+
+This function saves JIRA configuration in the following priority:
+1. Git repo root .env (if inside a git repo)
+2. User home directory .env
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" line="177" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" bodystart="177" bodyend="234"/>
+        <references refid="namespacepenify__hook_1_1utils_1a95c3f9c80860d6a2e2d061d2fb660a3f" compoundref="utils_8py" startline="62" endline="72">penify_hook.utils.recursive_search_git_folder</references>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1config__commands_1af115198ea5d6808ccb98733957f50b06" compoundref="config__commands_8py" startline="424" endline="552">penify_hook.commands.config_commands.config_jira_web</referencedby>
+        <referencedby refid="namespacepenify__hook_1_1config__command_1a240e5331681eb574ac319d7458783bde" compoundref="config__command_8py" startline="41" endline="98">penify_hook.config_command.handle_config</referencedby>
+        <referencedby refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1af8d62310da2d768e21770f8f01ff5375" compoundref="test__config__commands_8py" startline="305" endline="345">tests.test_config_commands.TestConfigCommands.test_save_jira_config_success</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1commands_1_1config__commands_1a6492bc8e7df6e38bb06ad05e572d4cc0" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>Dict[str, str]</type>
+        <definition> Dict[str, str] penify_hook.commands.config_commands.get_llm_config</definition>
+        <argsstring>()</argsstring>
+        <name>get_llm_config</name>
+        <qualifiedname>penify_hook.commands.config_commands.get_llm_config</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Get LLM configuration from environment variables.
+
+Environment variables:
+- PENIFY_LLM_MODEL: Model name
+- PENIFY_LLM_API_BASE: API base URL
+- PENIFY_LLM_API_KEY: API key
+
+Returns:
+    dict: Configuration dictionary with model, api_base, and api_key
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" line="235" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" bodystart="235" bodyend="263"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a3caf2b062dd33b1f1d7ddc7224f0ff87" compoundref="config__commands_8py" startline="105" endline="118">penify_hook.commands.config_commands.get_env_var_or_default</references>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1aabe277132ce0bc0aacef951cf1dee2ae" compoundref="config__commands_8py" startline="22" endline="64">penify_hook.commands.config_commands.load_env_files</references>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1commit__commands_1af4f739f524c38b437e4e47673d683e23" compoundref="commit__commands_8py" startline="128" endline="169">penify_hook.commands.commit_commands.handle_commit</referencedby>
+        <referencedby refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1abd12f028b89aa9cd1152c0b9ece5d3cd" compoundref="test__config__commands_8py" startline="129" endline="154">tests.test_config_commands.TestConfigCommands.test_get_llm_config_empty</referencedby>
+        <referencedby refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1adf9f2233a3f4cc5725b9d4f05758b167" compoundref="test__config__commands_8py" startline="97" endline="126">tests.test_config_commands.TestConfigCommands.test_get_llm_config_exists</referencedby>
+        <referencedby refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a473984d31452b56acd6ce4011a1248bd" compoundref="test__config__commands_8py" startline="158" endline="185">tests.test_config_commands.TestConfigCommands.test_get_llm_config_invalid_json</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1commands_1_1config__commands_1a15bf3685c4dcb5c15ba6a4055e484cf2" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>Dict[str, str]</type>
+        <definition> Dict[str, str] penify_hook.commands.config_commands.get_jira_config</definition>
+        <argsstring>()</argsstring>
+        <name>get_jira_config</name>
+        <qualifiedname>penify_hook.commands.config_commands.get_jira_config</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Get JIRA configuration from environment variables.
+
+Environment variables:
+- PENIFY_JIRA_URL: JIRA URL
+- PENIFY_JIRA_USER: JIRA username
+- PENIFY_JIRA_TOKEN: JIRA API token
+
+Returns:
+    dict: Configuration dictionary with url, username, and api_token
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" line="264" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" bodystart="264" bodyend="292"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a3caf2b062dd33b1f1d7ddc7224f0ff87" compoundref="config__commands_8py" startline="105" endline="118">penify_hook.commands.config_commands.get_env_var_or_default</references>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1aabe277132ce0bc0aacef951cf1dee2ae" compoundref="config__commands_8py" startline="22" endline="64">penify_hook.commands.config_commands.load_env_files</references>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1config__commands_1af115198ea5d6808ccb98733957f50b06" compoundref="config__commands_8py" startline="424" endline="552">penify_hook.commands.config_commands.config_jira_web</referencedby>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1commit__commands_1af4f739f524c38b437e4e47673d683e23" compoundref="commit__commands_8py" startline="128" endline="169">penify_hook.commands.commit_commands.handle_commit</referencedby>
+        <referencedby refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1aee37b97432821d19758c6325d4c74bcf" compoundref="test__config__commands_8py" startline="188" endline="222">tests.test_config_commands.TestConfigCommands.test_get_jira_config_exists</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1commands_1_1config__commands_1a185dfc34a655ed80e6c95939b6f3c35c" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.commands.config_commands.config_llm_web</definition>
+        <argsstring>()</argsstring>
+        <name>config_llm_web</name>
+        <qualifiedname>penify_hook.commands.config_commands.config_llm_web</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Open a web browser interface for configuring LLM settings.
+
+This function starts a temporary HTTP server that serves an HTML
+template for configuring Large Language Model (LLM) settings. It handles
+GET and POST requests to retrieve the current configuration, save new
+configurations, and suppress log messages.  The server runs on a random
+port between 30000 and 50000, and it is accessible via a URL like
+http://localhost:&lt;redirect_port&gt;. The function opens this URL in the
+default web browser for configuration. Once configured, the server shuts
+down.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" line="293" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" bodystart="293" bodyend="423"/>
+        <referencedby refid="namespacepenify__hook_1_1config__command_1a240e5331681eb574ac319d7458783bde" compoundref="config__command_8py" startline="41" endline="98">penify_hook.config_command.handle_config</referencedby>
+        <referencedby refid="classtests_1_1test__web__config_1_1TestWebConfig_1afc6440352201d207ea8b4d26f8ccfa35" compoundref="test__web__config_8py" startline="18" endline="55">tests.test_web_config.TestWebConfig.test_config_llm_web_server_setup</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1commands_1_1config__commands_1af115198ea5d6808ccb98733957f50b06" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.commands.config_commands.config_jira_web</definition>
+        <argsstring>()</argsstring>
+        <name>config_jira_web</name>
+        <qualifiedname>penify_hook.commands.config_commands.config_jira_web</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Open a web browser interface for configuring JIRA settings.
+
+This function sets up a simple HTTP server using Python&apos;s built-in
+`http.server` module to handle GET and POST requests. The server serves
+an HTML page for configuration and handles saving the JIRA configuration
+details through API tokens and URLs. Upon successful configuration, it
+shuts down the server gracefully.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" line="424" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" bodystart="424" bodyend="552"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a15bf3685c4dcb5c15ba6a4055e484cf2" compoundref="config__commands_8py" startline="264" endline="292">penify_hook.commands.config_commands.get_jira_config</references>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1ab2486ac2bf16b4a671e49625bfa4f9b4" compoundref="config__commands_8py" startline="177" endline="234">penify_hook.commands.config_commands.save_jira_config</references>
+        <referencedby refid="namespacepenify__hook_1_1config__command_1a240e5331681eb574ac319d7458783bde" compoundref="config__command_8py" startline="41" endline="98">penify_hook.config_command.handle_config</referencedby>
+        <referencedby refid="classtests_1_1test__web__config_1_1TestWebConfig_1a06e600222e426b003850509cb1d3190a" compoundref="test__web__config_8py" startline="59" endline="95">tests.test_web_config.TestWebConfig.test_config_jira_web_server_setup</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1commands_1_1config__commands_1a5503d51c905e2f1b299b12d2a73bd812" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>Optional[str]</type>
+        <definition> Optional[str] penify_hook.commands.config_commands.get_token</definition>
+        <argsstring>()</argsstring>
+        <name>get_token</name>
+        <qualifiedname>penify_hook.commands.config_commands.get_token</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Get the API token based on priority:
+1. Environment variable PENIFY_API_TOKEN from any .env file
+2. Config file &apos;api_keys&apos; value
+
+Returns:
+    str or None: API token if found, None otherwise
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" line="553" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" bodystart="553" bodyend="582"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a3caf2b062dd33b1f1d7ddc7224f0ff87" compoundref="config__commands_8py" startline="105" endline="118">penify_hook.commands.config_commands.get_env_var_or_default</references>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a6559a82d0bf727703d550d1003d3ed20" compoundref="config__commands_8py" startline="68" endline="104">penify_hook.commands.config_commands.get_penify_config</references>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1aabe277132ce0bc0aacef951cf1dee2ae" compoundref="config__commands_8py" startline="22" endline="64">penify_hook.commands.config_commands.load_env_files</references>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1commit__commands_1af4f739f524c38b437e4e47673d683e23" compoundref="commit__commands_8py" startline="128" endline="169">penify_hook.commands.commit_commands.handle_commit</referencedby>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a2006ab13bff718ef783868a910c0b704" compoundref="doc__commands_8py" startline="125" endline="158">penify_hook.commands.doc_commands.handle_docgen</referencedby>
+        <referencedby refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a6c0207be563c3de59a6d16277805114c" compoundref="test__config__commands_8py" startline="378" endline="409">tests.test_config_commands.TestConfigCommands.test_get_token_from_config</referencedby>
+        <referencedby refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a3355f7d313bebaa71694387cf2bc5232" compoundref="test__config__commands_8py" startline="349" endline="374">tests.test_config_commands.TestConfigCommands.test_get_token_from_env</referencedby>
+        <referencedby refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a400ca5d9fcdc159714e8df54920f9436" compoundref="test__config__commands_8py" startline="413" endline="450">tests.test_config_commands.TestConfigCommands.test_get_token_not_found</referencedby>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/namespacepenify__hook_1_1commands_1_1doc__commands.xml b/docs345/xml/namespacepenify__hook_1_1commands_1_1doc__commands.xml
new file mode 100644
index 0000000..7fc41b1
--- /dev/null
+++ b/docs345/xml/namespacepenify__hook_1_1commands_1_1doc__commands.xml
@@ -0,0 +1,155 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacepenify__hook_1_1commands_1_1doc__commands" kind="namespace" language="Python">
+    <compoundname>penify_hook::commands::doc_commands</compoundname>
+      <sectiondef kind="var">
+      <memberdef kind="variable" id="namespacepenify__hook_1_1commands_1_1doc__commands_1a3e42540047da37565afffeaf106cb948" prot="public" static="no" mutable="no">
+        <type>string</type>
+        <definition>string penify_hook::commands::doc_commands.docgen_description</definition>
+        <argsstring></argsstring>
+        <name>docgen_description</name>
+        <qualifiedname>penify_hook.commands.doc_commands.docgen_description</qualifiedname>
+        <initializer>=  &quot;&quot;&quot;Generate code documentation using Penify.
+
+This command requires you to be logged in to your Penify account.
+You can generate documentation for:
+- Current Git diff (default)
+- Specific file
+- Specific folder
+&quot;&quot;&quot;</initializer>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/doc_commands.py" line="74" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/doc_commands.py" bodystart="74" bodyend="-1"/>
+      </memberdef>
+      </sectiondef>
+      <sectiondef kind="func">
+      <memberdef kind="function" id="namespacepenify__hook_1_1commands_1_1doc__commands_1a4daac68bc563432bf25c85dc78081a25" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.commands.doc_commands.generate_doc</definition>
+        <argsstring>(api_url, token, location=None)</argsstring>
+        <name>generate_doc</name>
+        <qualifiedname>penify_hook.commands.doc_commands.generate_doc</qualifiedname>
+        <param>
+          <type>api_url</type>
+          <defname>api_url</defname>
+        </param>
+        <param>
+          <type>token</type>
+          <defname>token</defname>
+        </param>
+        <param>
+          <type>location</type>
+          <defname>location</defname>
+          <defval>None</defval>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Generates documentation based on the given parameters.
+
+This function initializes an API client using the provided API URL and
+token. It then generates documentation by analyzing the specified
+location, which can be a folder, a file, or the current working
+directory if no location is provided. The function handles different
+types of analysis based on the input location and reports any errors
+encountered during the process.
+
+Args:
+    api_url (str): The URL of the API to connect to for documentation generation.
+    token (str): The authentication token for accessing the API.
+    location (str?): The path to a specific file or folder to analyze. If not provided, the
+        current working directory is used.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/doc_commands.py" line="8" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/doc_commands.py" bodystart="8" bodyend="73"/>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a2006ab13bff718ef783868a910c0b704" compoundref="doc__commands_8py" startline="125" endline="158">penify_hook.commands.doc_commands.handle_docgen</referencedby>
+        <referencedby refid="namespacetests_1_1test__doc__commands_1aec76cc25c23476794234cdadbcaef0c0" compoundref="test__doc__commands_8py" startline="136" endline="168">tests.test_doc_commands.test_generate_doc_error_handling</referencedby>
+        <referencedby refid="namespacetests_1_1test__doc__commands_1a0e74c920f258f442914771164fe26b45" compoundref="test__doc__commands_8py" startline="63" endline="99">tests.test_doc_commands.test_generate_doc_file_location</referencedby>
+        <referencedby refid="namespacetests_1_1test__doc__commands_1a4bb75610e40d94d42bc169b25403c186" compoundref="test__doc__commands_8py" startline="101" endline="135">tests.test_doc_commands.test_generate_doc_folder_location</referencedby>
+        <referencedby refid="namespacetests_1_1test__doc__commands_1a806110833eb0aad547156faf014b31d8" compoundref="test__doc__commands_8py" startline="23" endline="61">tests.test_doc_commands.test_generate_doc_no_location</referencedby>
+        <referencedby refid="namespacetests_1_1test__doc__commands_1a335e7fd4912192c7276cf31bbebc6eb0" compoundref="test__doc__commands_8py" startline="313" endline="335">tests.test_doc_commands.test_generate_doc_with_file_exception</referencedby>
+        <referencedby refid="namespacetests_1_1test__doc__commands_1a64165ddfdb3071a88422f080f0e529a3" compoundref="test__doc__commands_8py" startline="336" endline="358">tests.test_doc_commands.test_generate_doc_with_folder_exception</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1commands_1_1doc__commands_1acc7f4ead1b11951d885fa5c151c2cbe0" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.commands.doc_commands.setup_docgen_parser</definition>
+        <argsstring>(parser)</argsstring>
+        <name>setup_docgen_parser</name>
+        <qualifiedname>penify_hook.commands.doc_commands.setup_docgen_parser</qualifiedname>
+        <param>
+          <type>parser</type>
+          <defname>parser</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Set up and configure a parser for documentation generation using Git
+commands.
+
+This function configures a parser with various subcommands and arguments
+necessary for generating documentation for Git diffs, files, or folders.
+It also installs and uninstalls commit hooks to automate documentation
+generation on commits.
+
+Args:
+    parser (argparse.ArgumentParser): The parser to configure.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/doc_commands.py" line="83" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/doc_commands.py" bodystart="83" bodyend="124"/>
+        <referencedby refid="namespacepenify__hook_1_1main_1a16838b20df4bd14ee4b5e1dd2906738f" compoundref="main_8py" startline="6" endline="87">penify_hook.main.main</referencedby>
+        <referencedby refid="namespacetests_1_1test__doc__commands_1a0f27751d0ba2acfe40ef7e85bccf47d7" compoundref="test__doc__commands_8py" startline="169" endline="199">tests.test_doc_commands.test_setup_docgen_parser</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1commands_1_1doc__commands_1a2006ab13bff718ef783868a910c0b704" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.commands.doc_commands.handle_docgen</definition>
+        <argsstring>(args)</argsstring>
+        <name>handle_docgen</name>
+        <qualifiedname>penify_hook.commands.doc_commands.handle_docgen</qualifiedname>
+        <param>
+          <type>args</type>
+          <defname>args</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Handle various subcommands related to document generation and hook
+management.
+
+This function processes different subcommands such as installing or
+uninstalling git hooks, and directly generating documentation based on
+provided arguments.
+
+Args:
+    args (Namespace): Parsed command-line arguments containing the subcommand and location
+        details.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/doc_commands.py" line="125" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/doc_commands.py" bodystart="125" bodyend="158"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a4daac68bc563432bf25c85dc78081a25" compoundref="doc__commands_8py" startline="8" endline="73">penify_hook.commands.doc_commands.generate_doc</references>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a5503d51c905e2f1b299b12d2a73bd812" compoundref="config__commands_8py" startline="553" endline="582">penify_hook.commands.config_commands.get_token</references>
+        <references refid="namespacepenify__hook_1_1commands_1_1hook__commands_1adff8f5d3bf1c3795974a391ee95b72b2" compoundref="hook__commands_8py" startline="12" endline="35">penify_hook.commands.hook_commands.install_git_hook</references>
+        <references refid="namespacepenify__hook_1_1commands_1_1hook__commands_1a81543eb5fa835fd1237f24e8bce6201d" compoundref="hook__commands_8py" startline="36" endline="54">penify_hook.commands.hook_commands.uninstall_git_hook</references>
+        <referencedby refid="namespacepenify__hook_1_1main_1a16838b20df4bd14ee4b5e1dd2906738f" compoundref="main_8py" startline="6" endline="87">penify_hook.main.main</referencedby>
+        <referencedby refid="namespacetests_1_1test__doc__commands_1ab158ffa48469b6c097a7a55fcb20c21a" compoundref="test__doc__commands_8py" startline="264" endline="290">tests.test_doc_commands.test_handle_docgen_generate</referencedby>
+        <referencedby refid="namespacetests_1_1test__doc__commands_1ab74688baa8c9b5ba302c2877a9789d05" compoundref="test__doc__commands_8py" startline="201" endline="232">tests.test_doc_commands.test_handle_docgen_install_hook</referencedby>
+        <referencedby refid="namespacetests_1_1test__doc__commands_1af9b01e5fc89255cac96747fa081c442c" compoundref="test__doc__commands_8py" startline="291" endline="312">tests.test_doc_commands.test_handle_docgen_no_token</referencedby>
+        <referencedby refid="namespacetests_1_1test__doc__commands_1a1458af9ad0128c3ca1263b552fd5e482" compoundref="test__doc__commands_8py" startline="234" endline="262">tests.test_doc_commands.test_handle_docgen_uninstall_hook</referencedby>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/doc_commands.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/namespacepenify__hook_1_1commands_1_1hook__commands.xml b/docs345/xml/namespacepenify__hook_1_1commands_1_1hook__commands.xml
new file mode 100644
index 0000000..753b073
--- /dev/null
+++ b/docs345/xml/namespacepenify__hook_1_1commands_1_1hook__commands.xml
@@ -0,0 +1,111 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacepenify__hook_1_1commands_1_1hook__commands" kind="namespace" language="Python">
+    <compoundname>penify_hook::commands::hook_commands</compoundname>
+      <sectiondef kind="var">
+      <memberdef kind="variable" id="namespacepenify__hook_1_1commands_1_1hook__commands_1ae82fd46e5a9219da1478b0476b8214b1" prot="public" static="no" mutable="no">
+        <type>string</type>
+        <definition>string penify_hook::commands::hook_commands.HOOK_FILENAME</definition>
+        <argsstring></argsstring>
+        <name>HOOK_FILENAME</name>
+        <qualifiedname>penify_hook.commands.hook_commands.HOOK_FILENAME</qualifiedname>
+        <initializer>=  &quot;post-commit&quot;</initializer>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/hook_commands.py" line="4" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/hook_commands.py" bodystart="4" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacepenify__hook_1_1commands_1_1hook__commands_1a6a45aad71c8d32ce11a6dff8cee8bee7" prot="public" static="no" mutable="no">
+        <type>string</type>
+        <definition>string penify_hook::commands::hook_commands.HOOK_TEMPLATE</definition>
+        <argsstring></argsstring>
+        <name>HOOK_TEMPLATE</name>
+        <qualifiedname>penify_hook.commands.hook_commands.HOOK_TEMPLATE</qualifiedname>
+        <initializer>=  &quot;&quot;&quot;#!/bin/sh
+# This is a post-commit hook generated by penify.
+# Automatically generates documentation for changed files after each commit.
+
+penify docgen -gf {git_folder_path} -t {token}
+&quot;&quot;&quot;</initializer>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/hook_commands.py" line="5" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/hook_commands.py" bodystart="5" bodyend="-1"/>
+      </memberdef>
+      </sectiondef>
+      <sectiondef kind="func">
+      <memberdef kind="function" id="namespacepenify__hook_1_1commands_1_1hook__commands_1adff8f5d3bf1c3795974a391ee95b72b2" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.commands.hook_commands.install_git_hook</definition>
+        <argsstring>(location, token)</argsstring>
+        <name>install_git_hook</name>
+        <qualifiedname>penify_hook.commands.hook_commands.install_git_hook</qualifiedname>
+        <param>
+          <type>location</type>
+          <defname>location</defname>
+        </param>
+        <param>
+          <type>token</type>
+          <defname>token</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Install a post-commit hook in the specified location that generates
+documentation
+for changed files after each commit.
+
+Args:
+    location (str): The path to the Git repository where the hook should be installed.
+    token (str): The authentication token required to access the documentation generation
+        service.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/hook_commands.py" line="12" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/hook_commands.py" bodystart="12" bodyend="35"/>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a2006ab13bff718ef783868a910c0b704" compoundref="doc__commands_8py" startline="125" endline="158">penify_hook.commands.doc_commands.handle_docgen</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1commands_1_1hook__commands_1a81543eb5fa835fd1237f24e8bce6201d" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.commands.hook_commands.uninstall_git_hook</definition>
+        <argsstring>(location)</argsstring>
+        <name>uninstall_git_hook</name>
+        <qualifiedname>penify_hook.commands.hook_commands.uninstall_git_hook</qualifiedname>
+        <param>
+          <type>location</type>
+          <defname>location</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Uninstalls the post-commit hook from the specified location.
+
+This function attempts to remove a post-commit git hook located at the
+given path. It constructs the path to the hook and checks if it exists.
+If the hook is found, it is deleted, and a confirmation message is
+printed. If no hook is found, a message indicating this is also printed.
+
+Args:
+    location (Path): The base directory where the .git/hooks directory is located.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/hook_commands.py" line="36" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/hook_commands.py" bodystart="36" bodyend="54"/>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a2006ab13bff718ef783868a910c0b704" compoundref="doc__commands_8py" startline="125" endline="158">penify_hook.commands.doc_commands.handle_docgen</referencedby>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/hook_commands.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/namespacepenify__hook_1_1commit__analyzer.xml b/docs345/xml/namespacepenify__hook_1_1commit__analyzer.xml
new file mode 100644
index 0000000..34e3580
--- /dev/null
+++ b/docs345/xml/namespacepenify__hook_1_1commit__analyzer.xml
@@ -0,0 +1,12 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacepenify__hook_1_1commit__analyzer" kind="namespace" language="Python">
+    <compoundname>penify_hook::commit_analyzer</compoundname>
+    <innerclass refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook" prot="public">penify_hook::commit_analyzer::CommitDocGenHook</innerclass>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commit_analyzer.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/namespacepenify__hook_1_1config__command.xml b/docs345/xml/namespacepenify__hook_1_1config__command.xml
new file mode 100644
index 0000000..b54b356
--- /dev/null
+++ b/docs345/xml/namespacepenify__hook_1_1config__command.xml
@@ -0,0 +1,78 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacepenify__hook_1_1config__command" kind="namespace" language="Python">
+    <compoundname>penify_hook::config_command</compoundname>
+      <sectiondef kind="func">
+      <memberdef kind="function" id="namespacepenify__hook_1_1config__command_1a4f3eb92164a69df1446d745f8a09285e" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.config_command.setup_config_parser</definition>
+        <argsstring>(parent_parser)</argsstring>
+        <name>setup_config_parser</name>
+        <qualifiedname>penify_hook.config_command.setup_config_parser</qualifiedname>
+        <param>
+          <type>parent_parser</type>
+          <defname>parent_parser</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Set up a configuration parser with subparsers for different types of
+configurations.
+
+This function configures and adds subcommands to the parent parser. Each
+subcommand corresponds to a specific type of configuration, such as LLM
+(Language Model) or JIRA. It allows users to configure settings for
+these systems through command-line arguments.
+
+Args:
+    parent_parser (argparse.ArgumentParser): The parent parser to which the config subparsers will be added.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/config_command.py" line="4" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/config_command.py" bodystart="4" bodyend="40"/>
+        <referencedby refid="namespacepenify__hook_1_1main_1a16838b20df4bd14ee4b5e1dd2906738f" compoundref="main_8py" startline="6" endline="87">penify_hook.main.main</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1config__command_1a240e5331681eb574ac319d7458783bde" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.config_command.handle_config</definition>
+        <argsstring>(args)</argsstring>
+        <name>handle_config</name>
+        <qualifiedname>penify_hook.config_command.handle_config</qualifiedname>
+        <param>
+          <type>args</type>
+          <defname>args</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Handle configuration settings based on the specified config type.
+
+This function processes different types of configurations such as LLM
+(Language Model) and JIRA. It saves configurations, sets up web-based
+configurations, and verifies JIRA connections.
+
+Args:
+    args (argparse.Namespace): Command-line arguments containing the type of configuration to handle.
+
+Returns:
+    int: Exit code indicating success or failure.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/config_command.py" line="41" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/config_command.py" bodystart="41" bodyend="98"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1af115198ea5d6808ccb98733957f50b06" compoundref="config__commands_8py" startline="424" endline="552">penify_hook.commands.config_commands.config_jira_web</references>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a185dfc34a655ed80e6c95939b6f3c35c" compoundref="config__commands_8py" startline="293" endline="423">penify_hook.commands.config_commands.config_llm_web</references>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1ab2486ac2bf16b4a671e49625bfa4f9b4" compoundref="config__commands_8py" startline="177" endline="234">penify_hook.commands.config_commands.save_jira_config</references>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a4617bc5956e502c9555dc0dda0376df4" compoundref="config__commands_8py" startline="119" endline="176">penify_hook.commands.config_commands.save_llm_config</references>
+        <referencedby refid="namespacepenify__hook_1_1main_1a16838b20df4bd14ee4b5e1dd2906738f" compoundref="main_8py" startline="6" endline="87">penify_hook.main.main</referencedby>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/config_command.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/namespacepenify__hook_1_1constants.xml b/docs345/xml/namespacepenify__hook_1_1constants.xml
new file mode 100644
index 0000000..1aafdc4
--- /dev/null
+++ b/docs345/xml/namespacepenify__hook_1_1constants.xml
@@ -0,0 +1,43 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacepenify__hook_1_1constants" kind="namespace" language="Python">
+    <compoundname>penify_hook::constants</compoundname>
+      <sectiondef kind="var">
+      <memberdef kind="variable" id="namespacepenify__hook_1_1constants_1af198b5d1fc2f44657a2061aa324af3e0" prot="public" static="no" mutable="no">
+        <type>string</type>
+        <definition>string penify_hook::constants.API_URL</definition>
+        <argsstring></argsstring>
+        <name>API_URL</name>
+        <qualifiedname>penify_hook.constants.API_URL</qualifiedname>
+        <initializer>=  &apos;http://localhost:8000/api&apos;</initializer>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/constants.py" line="1" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/constants.py" bodystart="1" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacepenify__hook_1_1constants_1a316c5a606e4440fb8224c6544c3a15f0" prot="public" static="no" mutable="no">
+        <type>string</type>
+        <definition>string penify_hook::constants.DASHBOARD_URL</definition>
+        <argsstring></argsstring>
+        <name>DASHBOARD_URL</name>
+        <qualifiedname>penify_hook.constants.DASHBOARD_URL</qualifiedname>
+        <initializer>=  &quot;https://dashboard.penify.dev/auth/localhost/login&quot;</initializer>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/constants.py" line="2" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/constants.py" bodystart="2" bodyend="-1"/>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/constants.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/namespacepenify__hook_1_1file__analyzer.xml b/docs345/xml/namespacepenify__hook_1_1file__analyzer.xml
new file mode 100644
index 0000000..1588f44
--- /dev/null
+++ b/docs345/xml/namespacepenify__hook_1_1file__analyzer.xml
@@ -0,0 +1,29 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacepenify__hook_1_1file__analyzer" kind="namespace" language="Python">
+    <compoundname>penify_hook::file_analyzer</compoundname>
+    <innerclass refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook" prot="public">penify_hook::file_analyzer::FileAnalyzerGenHook</innerclass>
+      <sectiondef kind="var">
+      <memberdef kind="variable" id="namespacepenify__hook_1_1file__analyzer_1af419a4965f079d58cac5a5281ddb1828" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook::file_analyzer.logger</definition>
+        <argsstring></argsstring>
+        <name>logger</name>
+        <qualifiedname>penify_hook.file_analyzer.logger</qualifiedname>
+        <initializer>=  logging.getLogger(__name__)</initializer>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/file_analyzer.py" line="18" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/file_analyzer.py" bodystart="18" bodyend="-1"/>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/file_analyzer.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/namespacepenify__hook_1_1folder__analyzer.xml b/docs345/xml/namespacepenify__hook_1_1folder__analyzer.xml
new file mode 100644
index 0000000..f75cafb
--- /dev/null
+++ b/docs345/xml/namespacepenify__hook_1_1folder__analyzer.xml
@@ -0,0 +1,12 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacepenify__hook_1_1folder__analyzer" kind="namespace" language="Python">
+    <compoundname>penify_hook::folder_analyzer</compoundname>
+    <innerclass refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook" prot="public">penify_hook::folder_analyzer::FolderAnalyzerGenHook</innerclass>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/folder_analyzer.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/namespacepenify__hook_1_1git__analyzer.xml b/docs345/xml/namespacepenify__hook_1_1git__analyzer.xml
new file mode 100644
index 0000000..9b156cc
--- /dev/null
+++ b/docs345/xml/namespacepenify__hook_1_1git__analyzer.xml
@@ -0,0 +1,29 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacepenify__hook_1_1git__analyzer" kind="namespace" language="Python">
+    <compoundname>penify_hook::git_analyzer</compoundname>
+    <innerclass refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook" prot="public">penify_hook::git_analyzer::GitDocGenHook</innerclass>
+      <sectiondef kind="var">
+      <memberdef kind="variable" id="namespacepenify__hook_1_1git__analyzer_1ac4ce143fdca789a79c66852c37d7363a" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook::git_analyzer.logger</definition>
+        <argsstring></argsstring>
+        <name>logger</name>
+        <qualifiedname>penify_hook.git_analyzer.logger</qualifiedname>
+        <initializer>=  logging.getLogger(__name__)</initializer>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/git_analyzer.py" line="17" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/git_analyzer.py" bodystart="17" bodyend="-1"/>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/git_analyzer.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/namespacepenify__hook_1_1jira__client.xml b/docs345/xml/namespacepenify__hook_1_1jira__client.xml
new file mode 100644
index 0000000..dbbe0fc
--- /dev/null
+++ b/docs345/xml/namespacepenify__hook_1_1jira__client.xml
@@ -0,0 +1,29 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacepenify__hook_1_1jira__client" kind="namespace" language="Python">
+    <compoundname>penify_hook::jira_client</compoundname>
+    <innerclass refid="classpenify__hook_1_1jira__client_1_1JiraClient" prot="public">penify_hook::jira_client::JiraClient</innerclass>
+      <sectiondef kind="var">
+      <memberdef kind="variable" id="namespacepenify__hook_1_1jira__client_1a5593ea3415081eca1eea92e4c1ad1aa2" prot="public" static="no" mutable="no">
+        <type>bool</type>
+        <definition>bool penify_hook::jira_client::JIRA_AVAILABLE</definition>
+        <argsstring></argsstring>
+        <name>JIRA_AVAILABLE</name>
+        <qualifiedname>penify_hook.jira_client.JIRA_AVAILABLE</qualifiedname>
+        <initializer>=  True</initializer>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" line="8" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" bodystart="8" bodyend="-1"/>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/namespacepenify__hook_1_1llm__client.xml b/docs345/xml/namespacepenify__hook_1_1llm__client.xml
new file mode 100644
index 0000000..5748cf6
--- /dev/null
+++ b/docs345/xml/namespacepenify__hook_1_1llm__client.xml
@@ -0,0 +1,12 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacepenify__hook_1_1llm__client" kind="namespace" language="Python">
+    <compoundname>penify_hook::llm_client</compoundname>
+    <innerclass refid="classpenify__hook_1_1llm__client_1_1LLMClient" prot="public">penify_hook::llm_client::LLMClient</innerclass>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/llm_client.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/namespacepenify__hook_1_1login__command.xml b/docs345/xml/namespacepenify__hook_1_1login__command.xml
new file mode 100644
index 0000000..30045f3
--- /dev/null
+++ b/docs345/xml/namespacepenify__hook_1_1login__command.xml
@@ -0,0 +1,65 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacepenify__hook_1_1login__command" kind="namespace" language="Python">
+    <compoundname>penify_hook::login_command</compoundname>
+      <sectiondef kind="func">
+      <memberdef kind="function" id="namespacepenify__hook_1_1login__command_1aae63db4c484797bead34b7d874020c6a" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.login_command.setup_login_parser</definition>
+        <argsstring>(parser)</argsstring>
+        <name>setup_login_parser</name>
+        <qualifiedname>penify_hook.login_command.setup_login_parser</qualifiedname>
+        <param>
+          <type>parser</type>
+          <defname>parser</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/login_command.py" line="1" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/login_command.py" bodystart="1" bodyend="4"/>
+        <referencedby refid="namespacepenify__hook_1_1main_1a16838b20df4bd14ee4b5e1dd2906738f" compoundref="main_8py" startline="6" endline="87">penify_hook.main.main</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1login__command_1ae4bf932fbafeff834b0a0c5a37f74ccd" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.login_command.handle_login</definition>
+        <argsstring>(args)</argsstring>
+        <name>handle_login</name>
+        <qualifiedname>penify_hook.login_command.handle_login</qualifiedname>
+        <param>
+          <type>args</type>
+          <defname>args</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Handle the login command.
+
+Initiates a user login process by calling the `login` function from the
+`penify_hook.commands.auth_commands` module using predefined constants
+`API_URL` and `DASHBOARD_URL` from the `penify_hook.constants` module.
+
+Args:
+    args (argparse.Namespace): Parsed arguments containing necessary parameters for the login command.
+
+Returns:
+    None: This function does not return any value; it is expected to handle the
+        login process internally.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/login_command.py" line="5" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/login_command.py" bodystart="5" bodyend="26"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1auth__commands_1a78f375c58bb6f69f98675e6a9ac84655" compoundref="auth__commands_8py" startline="82" endline="181">penify_hook.commands.auth_commands.login</references>
+        <referencedby refid="namespacepenify__hook_1_1main_1a16838b20df4bd14ee4b5e1dd2906738f" compoundref="main_8py" startline="6" endline="87">penify_hook.main.main</referencedby>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/login_command.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/namespacepenify__hook_1_1main.xml b/docs345/xml/namespacepenify__hook_1_1main.xml
new file mode 100644
index 0000000..786eb40
--- /dev/null
+++ b/docs345/xml/namespacepenify__hook_1_1main.xml
@@ -0,0 +1,50 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacepenify__hook_1_1main" kind="namespace" language="Python">
+    <compoundname>penify_hook::main</compoundname>
+      <sectiondef kind="func">
+      <memberdef kind="function" id="namespacepenify__hook_1_1main_1a16838b20df4bd14ee4b5e1dd2906738f" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.main.main</definition>
+        <argsstring>()</argsstring>
+        <name>main</name>
+        <qualifiedname>penify_hook.main.main</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Main function to handle command-line interface (CLI) interactions with
+Penify services.
+
+This tool provides a command-line interface for generating smart commit
+messages, configuring local-LLM and JIRA, and generating code
+documentation. It supports basic commands that do not require login and
+advanced commands that require user authentication. The `--version` flag
+can be used to display the version information.
+
+Returns:
+    int: Exit status of the program (0 for success, 1 for error).
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/main.py" line="6" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/main.py" bodystart="6" bodyend="87"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1commit__commands_1af4f739f524c38b437e4e47673d683e23" compoundref="commit__commands_8py" startline="128" endline="169">penify_hook.commands.commit_commands.handle_commit</references>
+        <references refid="namespacepenify__hook_1_1config__command_1a240e5331681eb574ac319d7458783bde" compoundref="config__command_8py" startline="41" endline="98">penify_hook.config_command.handle_config</references>
+        <references refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a2006ab13bff718ef783868a910c0b704" compoundref="doc__commands_8py" startline="125" endline="158">penify_hook.commands.doc_commands.handle_docgen</references>
+        <references refid="namespacepenify__hook_1_1login__command_1ae4bf932fbafeff834b0a0c5a37f74ccd" compoundref="login__command_8py" startline="5" endline="26">penify_hook.login_command.handle_login</references>
+        <references refid="namespacepenify__hook_1_1main_1a16838b20df4bd14ee4b5e1dd2906738f" compoundref="main_8py" startline="6" endline="87">penify_hook.main.main</references>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" compoundref="ui__utils_8py" startline="108" endline="119">penify_hook.ui_utils.print_info</references>
+        <references refid="namespacepenify__hook_1_1commands_1_1commit__commands_1a8627583116eb78e31a4d3cdc16d2f15c" compoundref="commit__commands_8py" startline="100" endline="127">penify_hook.commands.commit_commands.setup_commit_parser</references>
+        <references refid="namespacepenify__hook_1_1config__command_1a4f3eb92164a69df1446d745f8a09285e" compoundref="config__command_8py" startline="4" endline="40">penify_hook.config_command.setup_config_parser</references>
+        <references refid="namespacepenify__hook_1_1commands_1_1doc__commands_1acc7f4ead1b11951d885fa5c151c2cbe0" compoundref="doc__commands_8py" startline="83" endline="124">penify_hook.commands.doc_commands.setup_docgen_parser</references>
+        <references refid="namespacepenify__hook_1_1login__command_1aae63db4c484797bead34b7d874020c6a" compoundref="login__command_8py" startline="1" endline="4">penify_hook.login_command.setup_login_parser</references>
+        <referencedby refid="namespacepenify__hook_1_1main_1a16838b20df4bd14ee4b5e1dd2906738f" compoundref="main_8py" startline="6" endline="87">penify_hook.main.main</referencedby>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/main.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/namespacepenify__hook_1_1ui__utils.xml b/docs345/xml/namespacepenify__hook_1_1ui__utils.xml
new file mode 100644
index 0000000..194d4f6
--- /dev/null
+++ b/docs345/xml/namespacepenify__hook_1_1ui__utils.xml
@@ -0,0 +1,667 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacepenify__hook_1_1ui__utils" kind="namespace" language="Python">
+    <compoundname>penify_hook::ui_utils</compoundname>
+      <sectiondef kind="var">
+      <memberdef kind="variable" id="namespacepenify__hook_1_1ui__utils_1ab560cfade398ac1e0bd47befb52d9f71" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook::ui_utils.autoreset</definition>
+        <argsstring></argsstring>
+        <name>autoreset</name>
+        <qualifiedname>penify_hook.ui_utils.autoreset</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="12" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="12" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacepenify__hook_1_1ui__utils_1a9fdcb180915696f5d217032a62c3857c" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook::ui_utils.INFO_COLOR</definition>
+        <argsstring></argsstring>
+        <name>INFO_COLOR</name>
+        <qualifiedname>penify_hook.ui_utils.INFO_COLOR</qualifiedname>
+        <initializer>=  Fore.CYAN</initializer>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="15" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="15" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacepenify__hook_1_1ui__utils_1a22c450c5e2b5394618ecf9b636560df4" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook::ui_utils.SUCCESS_COLOR</definition>
+        <argsstring></argsstring>
+        <name>SUCCESS_COLOR</name>
+        <qualifiedname>penify_hook.ui_utils.SUCCESS_COLOR</qualifiedname>
+        <initializer>=  Fore.GREEN</initializer>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="16" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="16" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacepenify__hook_1_1ui__utils_1a177bc9b44157844c999e0c1c2c6936ff" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook::ui_utils.WARNING_COLOR</definition>
+        <argsstring></argsstring>
+        <name>WARNING_COLOR</name>
+        <qualifiedname>penify_hook.ui_utils.WARNING_COLOR</qualifiedname>
+        <initializer>=  Fore.YELLOW</initializer>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="17" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="17" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacepenify__hook_1_1ui__utils_1a4ab4e61dfab7973c87bef59c6e1977fe" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook::ui_utils.ERROR_COLOR</definition>
+        <argsstring></argsstring>
+        <name>ERROR_COLOR</name>
+        <qualifiedname>penify_hook.ui_utils.ERROR_COLOR</qualifiedname>
+        <initializer>=  Fore.RED</initializer>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="18" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="18" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacepenify__hook_1_1ui__utils_1aba01b8259f0d66cdc2b4a1b58f9736fc" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook::ui_utils.HIGHLIGHT_COLOR</definition>
+        <argsstring></argsstring>
+        <name>HIGHLIGHT_COLOR</name>
+        <qualifiedname>penify_hook.ui_utils.HIGHLIGHT_COLOR</qualifiedname>
+        <initializer>=  Fore.BLUE</initializer>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="19" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="19" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacepenify__hook_1_1ui__utils_1aca0fcee81606857497520ae4290bc9f5" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook::ui_utils.NEUTRAL_COLOR</definition>
+        <argsstring></argsstring>
+        <name>NEUTRAL_COLOR</name>
+        <qualifiedname>penify_hook.ui_utils.NEUTRAL_COLOR</qualifiedname>
+        <initializer>=  Fore.WHITE</initializer>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="20" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="20" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacepenify__hook_1_1ui__utils_1a3c6fe4bd17c1a5fe76587225ae4beb3e" prot="public" static="no" mutable="no">
+        <type>string</type>
+        <definition>string penify_hook::ui_utils.SUCCESS_SYMBOL</definition>
+        <argsstring></argsstring>
+        <name>SUCCESS_SYMBOL</name>
+        <qualifiedname>penify_hook.ui_utils.SUCCESS_SYMBOL</qualifiedname>
+        <initializer>=  &quot;✓&quot;</initializer>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="23" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="23" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacepenify__hook_1_1ui__utils_1a6eaea98f1a8cbe16a181647da2fc0a16" prot="public" static="no" mutable="no">
+        <type>string</type>
+        <definition>string penify_hook::ui_utils.WARNING_SYMBOL</definition>
+        <argsstring></argsstring>
+        <name>WARNING_SYMBOL</name>
+        <qualifiedname>penify_hook.ui_utils.WARNING_SYMBOL</qualifiedname>
+        <initializer>=  &quot;○&quot;</initializer>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="24" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="24" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacepenify__hook_1_1ui__utils_1aa564e1e1d016c8227d076542e74cecb0" prot="public" static="no" mutable="no">
+        <type>string</type>
+        <definition>string penify_hook::ui_utils.ERROR_SYMBOL</definition>
+        <argsstring></argsstring>
+        <name>ERROR_SYMBOL</name>
+        <qualifiedname>penify_hook.ui_utils.ERROR_SYMBOL</qualifiedname>
+        <initializer>=  &quot;✗&quot;</initializer>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="25" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="25" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacepenify__hook_1_1ui__utils_1a3b208e2750a38dd09467a73e4afd9756" prot="public" static="no" mutable="no">
+        <type>string</type>
+        <definition>string penify_hook::ui_utils.PROCESSING_SYMBOL</definition>
+        <argsstring></argsstring>
+        <name>PROCESSING_SYMBOL</name>
+        <qualifiedname>penify_hook.ui_utils.PROCESSING_SYMBOL</qualifiedname>
+        <initializer>=  &quot;⟳&quot;</initializer>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="26" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="26" bodyend="-1"/>
+      </memberdef>
+      </sectiondef>
+      <sectiondef kind="func">
+      <memberdef kind="function" id="namespacepenify__hook_1_1ui__utils_1a92c3e466d1912058167be2eacf85b9f6" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.ui_utils.format_info</definition>
+        <argsstring>(message)</argsstring>
+        <name>format_info</name>
+        <qualifiedname>penify_hook.ui_utils.format_info</qualifiedname>
+        <param>
+          <type>message</type>
+          <defname>message</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Format an informational message with appropriate color.
+
+Args:
+    message (str): The text of the informational message to be formatted.
+
+Returns:
+    str: The formatted informational message with the specified color.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="28" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="28" bodyend="38"/>
+        <referencedby refid="namespacepenify__hook_1_1ui__utils_1a12b92532b1458af94f3649d411b5505c" compoundref="ui__utils_8py" startline="190" endline="208">penify_hook.ui_utils.create_progress_bar</referencedby>
+        <referencedby refid="namespacepenify__hook_1_1ui__utils_1a3da02cd1140179a9ce60f62c85fccfef" compoundref="ui__utils_8py" startline="209" endline="232">penify_hook.ui_utils.create_stage_progress_bar</referencedby>
+        <referencedby refid="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" compoundref="ui__utils_8py" startline="108" endline="119">penify_hook.ui_utils.print_info</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1ui__utils_1a532cdb4de7c679ce8b29c3e9116c4776" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.ui_utils.format_success</definition>
+        <argsstring>(message)</argsstring>
+        <name>format_success</name>
+        <qualifiedname>penify_hook.ui_utils.format_success</qualifiedname>
+        <param>
+          <type>message</type>
+          <defname>message</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Format a success message with appropriate color.
+
+This function takes a message as input and wraps it in ANSI escape codes
+to display it in green, indicating a successful operation. The
+Style.RESET_ALL is applied at the end to ensure that any subsequent text
+is displayed in the default style.
+
+Args:
+    message (str): The message to be formatted as a success message.
+
+Returns:
+    str: The formatted success message with green color and reset style.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="39" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="39" bodyend="54"/>
+        <referencedby refid="namespacepenify__hook_1_1ui__utils_1a2b16aa6b68a9edea5f29f84f1c4be79a" compoundref="ui__utils_8py" startline="120" endline="131">penify_hook.ui_utils.print_success</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1ui__utils_1a0a6fd2613c6fe053b6e4356cd9e5cda2" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.ui_utils.format_warning</definition>
+        <argsstring>(message)</argsstring>
+        <name>format_warning</name>
+        <qualifiedname>penify_hook.ui_utils.format_warning</qualifiedname>
+        <param>
+          <type>message</type>
+          <defname>message</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Format a warning message with appropriate color.
+
+Args:
+    message (str): The warning message to be formatted.
+
+Returns:
+    str: The formatted warning message with the specified color.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="55" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="55" bodyend="65"/>
+        <referencedby refid="namespacepenify__hook_1_1ui__utils_1a1ffbb9671dbe233770268e2dd66a67fa" compoundref="ui__utils_8py" startline="132" endline="143">penify_hook.ui_utils.print_warning</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1ui__utils_1a4dd934568897433fa73f9cc182ac4a3e" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.ui_utils.format_error</definition>
+        <argsstring>(message)</argsstring>
+        <name>format_error</name>
+        <qualifiedname>penify_hook.ui_utils.format_error</qualifiedname>
+        <param>
+          <type>message</type>
+          <defname>message</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Format an error message with appropriate color.
+
+This function takes a plain error message and wraps it in ANSI escape
+codes to apply the specified error color, ensuring that the error
+message is visually distinct when output. The function supports various
+error colors defined by constants like `ERROR_COLOR`.
+
+Args:
+    message (str): The plain text error message to be formatted.
+
+Returns:
+    str: The formatted error message with the error color applied.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="66" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="66" bodyend="81"/>
+        <referencedby refid="namespacepenify__hook_1_1ui__utils_1a6f0acd7dd91abfe67d0807803bc3b65f" compoundref="ui__utils_8py" startline="144" endline="155">penify_hook.ui_utils.print_error</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1ui__utils_1adcb97fc26b405d2b9cdf5eb7aecc5452" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.ui_utils.format_highlight</definition>
+        <argsstring>(message)</argsstring>
+        <name>format_highlight</name>
+        <qualifiedname>penify_hook.ui_utils.format_highlight</qualifiedname>
+        <param>
+          <type>message</type>
+          <defname>message</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Format a highlighted message with appropriate color.
+
+Args:
+    message (str): The message to be formatted and highlighted.
+
+Returns:
+    str: The formatted message with applied highlight style.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="82" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="82" bodyend="92"/>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1ui__utils_1af3441fb3c2c3850b8b3b6455a9fdaba4" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.ui_utils.format_file_path</definition>
+        <argsstring>(file_path)</argsstring>
+        <name>format_file_path</name>
+        <qualifiedname>penify_hook.ui_utils.format_file_path</qualifiedname>
+        <param>
+          <type>file_path</type>
+          <defname>file_path</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Format a file path with appropriate color.
+
+This function takes a file path as input and wraps it in ANSI escape
+codes to apply a warning color. The original file path is then reset to
+default style using Style.RESET_ALL.
+
+Args:
+    file_path (str): The file path to be formatted.
+
+Returns:
+    str: The formatted file path with the warning color applied.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="93" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="93" bodyend="107"/>
+        <referencedby refid="namespacepenify__hook_1_1ui__utils_1adfcbbfe39029ab6d1dd33e7bf75ae115" compoundref="ui__utils_8py" startline="156" endline="168">penify_hook.ui_utils.print_processing</referencedby>
+        <referencedby refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a6ab39391dfb7686f2a2d21a702dd3073" compoundref="file__analyzer_8py" startline="96" endline="100">penify_hook.file_analyzer.FileAnalyzerGenHook.print_processing</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.ui_utils.print_info</definition>
+        <argsstring>(message)</argsstring>
+        <name>print_info</name>
+        <qualifiedname>penify_hook.ui_utils.print_info</qualifiedname>
+        <param>
+          <type>message</type>
+          <defname>message</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Print an informational message with appropriate formatting.
+
+This function takes a string message as input and prints it in a
+formatted manner. It utilizes the `format_info` function to apply any
+necessary formatting before printing.
+
+Args:
+    message (str): The message to be printed.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="108" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="108" bodyend="119"/>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a92c3e466d1912058167be2eacf85b9f6" compoundref="ui__utils_8py" startline="28" endline="38">penify_hook.ui_utils.format_info</references>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1commit__commands_1a62564c4e8ad59fc46d56cb0f9122a71a" compoundref="commit__commands_8py" startline="10" endline="99">penify_hook.commands.commit_commands.commit_code</referencedby>
+        <referencedby refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a093d6456fe053ef7a7862d5d6851910c" compoundref="jira__client_8py" startline="58" endline="83">penify_hook.jira_client.JiraClient.extract_issue_keys_from_branch</referencedby>
+        <referencedby refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a8496194276441fa2eb2fa014eaab9a37" compoundref="commit__analyzer_8py" startline="21" endline="72">penify_hook.commit_analyzer.CommitDocGenHook.get_summary</referencedby>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1commit__commands_1af4f739f524c38b437e4e47673d683e23" compoundref="commit__commands_8py" startline="128" endline="169">penify_hook.commands.commit_commands.handle_commit</referencedby>
+        <referencedby refid="namespacepenify__hook_1_1main_1a16838b20df4bd14ee4b5e1dd2906738f" compoundref="main_8py" startline="6" endline="87">penify_hook.main.main</referencedby>
+        <referencedby refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1adda13cc121d96342476ccf72b63a007f" compoundref="commit__analyzer_8py" startline="113" endline="161">penify_hook.commit_analyzer.CommitDocGenHook.process_jira_integration</referencedby>
+        <referencedby refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a3beba14e92d717391a74bb70b1fab0ae" compoundref="git__analyzer_8py" startline="152" endline="197">penify_hook.git_analyzer.GitDocGenHook.run</referencedby>
+        <referencedby refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a6370a03f7ed9175ef6f81e931a105ea9" compoundref="commit__analyzer_8py" startline="73" endline="112">penify_hook.commit_analyzer.CommitDocGenHook.run</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1ui__utils_1a2b16aa6b68a9edea5f29f84f1c4be79a" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.ui_utils.print_success</definition>
+        <argsstring>(message)</argsstring>
+        <name>print_success</name>
+        <qualifiedname>penify_hook.ui_utils.print_success</qualifiedname>
+        <param>
+          <type>message</type>
+          <defname>message</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Print a formatted success message.
+
+This function takes a string `message` and prints it as a formatted
+success message. The formatting includes adding a prefix &quot;Success: &quot; to
+the message and enclosing it within asterisks for emphasis.
+
+Args:
+    message (str): The message to be printed as a success message.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="120" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="120" bodyend="131"/>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a532cdb4de7c679ce8b29c3e9116c4776" compoundref="ui__utils_8py" startline="39" endline="54">penify_hook.ui_utils.format_success</references>
+        <referencedby refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a4f4dffbc432fac3e259d957dd1e187f1" compoundref="file__analyzer_8py" startline="101" endline="144">penify_hook.file_analyzer.FileAnalyzerGenHook.run</referencedby>
+        <referencedby refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a3beba14e92d717391a74bb70b1fab0ae" compoundref="git__analyzer_8py" startline="152" endline="197">penify_hook.git_analyzer.GitDocGenHook.run</referencedby>
+        <referencedby refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a6370a03f7ed9175ef6f81e931a105ea9" compoundref="commit__analyzer_8py" startline="73" endline="112">penify_hook.commit_analyzer.CommitDocGenHook.run</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1ui__utils_1a1ffbb9671dbe233770268e2dd66a67fa" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.ui_utils.print_warning</definition>
+        <argsstring>(message)</argsstring>
+        <name>print_warning</name>
+        <qualifiedname>penify_hook.ui_utils.print_warning</qualifiedname>
+        <param>
+          <type>message</type>
+          <defname>message</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Print a warning message with appropriate formatting.
+
+This function takes a warning message as input and prints it with
+formatted output. The formatting may include color, timestamp, or other
+styles to emphasize that it is a warning.
+
+Args:
+    message (str): The warning message to be printed.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="132" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="132" bodyend="143"/>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a0a6fd2613c6fe053b6e4356cd9e5cda2" compoundref="ui__utils_8py" startline="55" endline="65">penify_hook.ui_utils.format_warning</references>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1commit__commands_1a62564c4e8ad59fc46d56cb0f9122a71a" compoundref="commit__commands_8py" startline="10" endline="99">penify_hook.commands.commit_commands.commit_code</referencedby>
+        <referencedby refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a2cc6c22ef588fccf3eed9bbc57fb6d6e" compoundref="file__analyzer_8py" startline="27" endline="95">penify_hook.file_analyzer.FileAnalyzerGenHook.process_file</referencedby>
+        <referencedby refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1adda13cc121d96342476ccf72b63a007f" compoundref="commit__analyzer_8py" startline="113" endline="161">penify_hook.commit_analyzer.CommitDocGenHook.process_jira_integration</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1ui__utils_1a6f0acd7dd91abfe67d0807803bc3b65f" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.ui_utils.print_error</definition>
+        <argsstring>(message)</argsstring>
+        <name>print_error</name>
+        <qualifiedname>penify_hook.ui_utils.print_error</qualifiedname>
+        <param>
+          <type>message</type>
+          <defname>message</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Print an error message with appropriate formatting.
+
+This function takes a string message, formats it as an error message,
+and then prints it. The formatting typically includes prefixing the
+message with &quot;Error: &quot; to clearly indicate that it is an error.
+
+Args:
+    message (str): The error message to be printed.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="144" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="144" bodyend="155"/>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a4dd934568897433fa73f9cc182ac4a3e" compoundref="ui__utils_8py" startline="66" endline="81">penify_hook.ui_utils.format_error</references>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1commit__commands_1a62564c4e8ad59fc46d56cb0f9122a71a" compoundref="commit__commands_8py" startline="10" endline="99">penify_hook.commands.commit_commands.commit_code</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1ui__utils_1adfcbbfe39029ab6d1dd33e7bf75ae115" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.ui_utils.print_processing</definition>
+        <argsstring>(file_path)</argsstring>
+        <name>print_processing</name>
+        <qualifiedname>penify_hook.ui_utils.print_processing</qualifiedname>
+        <param>
+          <type>file_path</type>
+          <defname>file_path</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Print a processing message for a specified file.
+
+This function takes a file path, formats it using `format_file_path`,
+and then prints a formatted message indicating that the file is being
+processed. The formatted path is highlighted using `format_highlight`.
+
+Args:
+    file_path (str): The path of the file to be processed.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="156" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="156" bodyend="168"/>
+        <references refid="namespacepenify__hook_1_1ui__utils_1af3441fb3c2c3850b8b3b6455a9fdaba4" compoundref="ui__utils_8py" startline="93" endline="107">penify_hook.ui_utils.format_file_path</references>
+        <referencedby refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a3beba14e92d717391a74bb70b1fab0ae" compoundref="git__analyzer_8py" startline="152" endline="197">penify_hook.git_analyzer.GitDocGenHook.run</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1ui__utils_1aa6e684c00e26199440137a87ed9b195c" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.ui_utils.print_status</definition>
+        <argsstring>(status, message)</argsstring>
+        <name>print_status</name>
+        <qualifiedname>penify_hook.ui_utils.print_status</qualifiedname>
+        <param>
+          <type>status</type>
+          <defname>status</defname>
+        </param>
+        <param>
+          <type>message</type>
+          <defname>message</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Print a status message with an appropriate symbol.
+
+This function takes a status and a message, then prints them with a
+colored symbol that corresponds to the given status. The available
+statuses are &apos;success&apos;, &apos;warning&apos;, &apos;error&apos;, and any other value will
+default to a processing indicator.
+
+Args:
+    status (str): The status type (&apos;success&apos;, &apos;warning&apos;, &apos;error&apos;) or another string.
+    message (str): The message to be displayed along with the symbol.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="169" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="169" bodyend="189"/>
+        <referencedby refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a4f4dffbc432fac3e259d957dd1e187f1" compoundref="file__analyzer_8py" startline="101" endline="144">penify_hook.file_analyzer.FileAnalyzerGenHook.run</referencedby>
+        <referencedby refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a3beba14e92d717391a74bb70b1fab0ae" compoundref="git__analyzer_8py" startline="152" endline="197">penify_hook.git_analyzer.GitDocGenHook.run</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1ui__utils_1a12b92532b1458af94f3649d411b5505c" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.ui_utils.create_progress_bar</definition>
+        <argsstring>(total, desc=&quot;Processing&quot;, unit=&quot;item&quot;)</argsstring>
+        <name>create_progress_bar</name>
+        <qualifiedname>penify_hook.ui_utils.create_progress_bar</qualifiedname>
+        <param>
+          <type>total</type>
+          <defname>total</defname>
+        </param>
+        <param>
+          <type>desc</type>
+          <defname>desc</defname>
+          <defval>&quot;Processing&quot;</defval>
+        </param>
+        <param>
+          <type>unit</type>
+          <defname>unit</defname>
+          <defval>&quot;item&quot;</defval>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Create a tqdm progress bar with consistent styling.
+
+Args:
+    total (int): Total number of items to process.
+    desc (str): Description for the progress bar. Defaults to &quot;Processing&quot;.
+    unit (str): Unit label for the progress items. Defaults to &quot;item&quot;.
+
+Returns:
+    tqdm: A configured tqdm progress bar instance.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="190" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="190" bodyend="208"/>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a92c3e466d1912058167be2eacf85b9f6" compoundref="ui__utils_8py" startline="28" endline="38">penify_hook.ui_utils.format_info</references>
+        <referencedby refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a3beba14e92d717391a74bb70b1fab0ae" compoundref="git__analyzer_8py" startline="152" endline="197">penify_hook.git_analyzer.GitDocGenHook.run</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1ui__utils_1a3da02cd1140179a9ce60f62c85fccfef" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.ui_utils.create_stage_progress_bar</definition>
+        <argsstring>(stages, desc=&quot;Processing&quot;)</argsstring>
+        <name>create_stage_progress_bar</name>
+        <qualifiedname>penify_hook.ui_utils.create_stage_progress_bar</qualifiedname>
+        <param>
+          <type>stages</type>
+          <defname>stages</defname>
+        </param>
+        <param>
+          <type>desc</type>
+          <defname>desc</defname>
+          <defval>&quot;Processing&quot;</defval>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Create a tqdm progress bar for processing stages with consistent
+styling.
+
+This function initializes and returns a tqdm progress bar object for
+tracking the progress through a series of stages. It also provides a
+description for the progress bar to enhance its usability.
+
+Args:
+    stages (list): A list of strings representing individual stages in the process.
+    desc (str?): A description for the progress bar. Defaults to &quot;Processing&quot;.
+
+Returns:
+    tuple: A tuple containing the tqdm progress bar object and the list of stages.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="209" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="209" bodyend="232"/>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a92c3e466d1912058167be2eacf85b9f6" compoundref="ui__utils_8py" startline="28" endline="38">penify_hook.ui_utils.format_info</references>
+        <referencedby refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a4f4dffbc432fac3e259d957dd1e187f1" compoundref="file__analyzer_8py" startline="101" endline="144">penify_hook.file_analyzer.FileAnalyzerGenHook.run</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1ui__utils_1a5a7340d0fc60fb80f17514d60bf45f1d" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.ui_utils.update_stage</definition>
+        <argsstring>(pbar, stage_name)</argsstring>
+        <name>update_stage</name>
+        <qualifiedname>penify_hook.ui_utils.update_stage</qualifiedname>
+        <param>
+          <type>pbar</type>
+          <defname>pbar</defname>
+        </param>
+        <param>
+          <type>stage_name</type>
+          <defname>stage_name</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Update the progress bar with a new stage name.
+
+This function updates the provided tqdm progress bar to reflect the
+current stage of a process. It clears any existing postfix and sets a
+new description based on the provided stage name. The display is then
+refreshed to ensure that the update is visible immediately.
+
+Args:
+    pbar (tqdm): The progress bar object to be updated.
+    stage_name (str): A string representing the current stage of the process.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="233" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="233" bodyend="249"/>
+        <referencedby refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a2cc6c22ef588fccf3eed9bbc57fb6d6e" compoundref="file__analyzer_8py" startline="27" endline="95">penify_hook.file_analyzer.FileAnalyzerGenHook.process_file</referencedby>
+        <referencedby refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a4f4dffbc432fac3e259d957dd1e187f1" compoundref="file__analyzer_8py" startline="101" endline="144">penify_hook.file_analyzer.FileAnalyzerGenHook.run</referencedby>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+<para><verbatim>UI utilities for Penify CLI.
+
+This module provides utility functions for consistent UI formatting,
+colored output, and progress indicators across the Penify CLI application.
+</verbatim> </para>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/namespacepenify__hook_1_1utils.xml b/docs345/xml/namespacepenify__hook_1_1utils.xml
new file mode 100644
index 0000000..fea6e7d
--- /dev/null
+++ b/docs345/xml/namespacepenify__hook_1_1utils.xml
@@ -0,0 +1,96 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacepenify__hook_1_1utils" kind="namespace" language="Python">
+    <compoundname>penify_hook::utils</compoundname>
+    <innerclass refid="classpenify__hook_1_1utils_1_1GitRepoNotFoundError" prot="public">penify_hook::utils::GitRepoNotFoundError</innerclass>
+      <sectiondef kind="var">
+      <memberdef kind="variable" id="namespacepenify__hook_1_1utils_1a0c0c1ed6b197038085c94a90ceedfb01" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook::utils.logger</definition>
+        <argsstring></argsstring>
+        <name>logger</name>
+        <qualifiedname>penify_hook.utils.logger</qualifiedname>
+        <initializer>=  logging.getLogger(__name__)</initializer>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/utils.py" line="6" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/utils.py" bodystart="6" bodyend="-1"/>
+      </memberdef>
+      </sectiondef>
+      <sectiondef kind="func">
+      <memberdef kind="function" id="namespacepenify__hook_1_1utils_1ae236f3c4c8bf5dcddbb92b4c2065eea3" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.utils.get_repo_details</definition>
+        <argsstring>(Repo repo)</argsstring>
+        <name>get_repo_details</name>
+        <qualifiedname>penify_hook.utils.get_repo_details</qualifiedname>
+        <param>
+          <type>Repo</type>
+          <declname>repo</declname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Determine the details of a repository including its remote URL, hosting service, organization name, and repository name.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/utils.py" line="13" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/utils.py" bodystart="13" bodyend="61"/>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1utils_1a95c3f9c80860d6a2e2d061d2fb660a3f" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.utils.recursive_search_git_folder</definition>
+        <argsstring>(folder_path)</argsstring>
+        <name>recursive_search_git_folder</name>
+        <qualifiedname>penify_hook.utils.recursive_search_git_folder</qualifiedname>
+        <param>
+          <type>folder_path</type>
+          <defname>folder_path</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Recursively searches for a .git folder starting from the given directory.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/utils.py" line="62" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/utils.py" bodystart="62" bodyend="72"/>
+        <references refid="namespacepenify__hook_1_1utils_1a95c3f9c80860d6a2e2d061d2fb660a3f" compoundref="utils_8py" startline="62" endline="72">penify_hook.utils.recursive_search_git_folder</references>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1commit__commands_1a62564c4e8ad59fc46d56cb0f9122a71a" compoundref="commit__commands_8py" startline="10" endline="99">penify_hook.commands.commit_commands.commit_code</referencedby>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1config__commands_1a6559a82d0bf727703d550d1003d3ed20" compoundref="config__commands_8py" startline="68" endline="104">penify_hook.commands.config_commands.get_penify_config</referencedby>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1config__commands_1aabe277132ce0bc0aacef951cf1dee2ae" compoundref="config__commands_8py" startline="22" endline="64">penify_hook.commands.config_commands.load_env_files</referencedby>
+        <referencedby refid="namespacepenify__hook_1_1utils_1a95c3f9c80860d6a2e2d061d2fb660a3f" compoundref="utils_8py" startline="62" endline="72">penify_hook.utils.recursive_search_git_folder</referencedby>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1auth__commands_1aa3956ca1749d4218ea1dc6e5b6218b24" compoundref="auth__commands_8py" startline="11" endline="81">penify_hook.commands.auth_commands.save_credentials</referencedby>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1config__commands_1ab2486ac2bf16b4a671e49625bfa4f9b4" compoundref="config__commands_8py" startline="177" endline="234">penify_hook.commands.config_commands.save_jira_config</referencedby>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1config__commands_1a4617bc5956e502c9555dc0dda0376df4" compoundref="config__commands_8py" startline="119" endline="176">penify_hook.commands.config_commands.save_llm_config</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1utils_1a4ec5335a4026c22a34a3a8ccf665a5f2" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.utils.find_git_parent</definition>
+        <argsstring>(path)</argsstring>
+        <name>find_git_parent</name>
+        <qualifiedname>penify_hook.utils.find_git_parent</qualifiedname>
+        <param>
+          <type>path</type>
+          <defname>path</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Traverse up from the given path to find the nearest directory containing a .git subdirectory.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/utils.py" line="73" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/utils.py" bodystart="73" bodyend="84"/>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/utils.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/namespacesetup.xml b/docs345/xml/namespacesetup.xml
new file mode 100644
index 0000000..9527ed9
--- /dev/null
+++ b/docs345/xml/namespacesetup.xml
@@ -0,0 +1,195 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacesetup" kind="namespace" language="Python">
+    <compoundname>setup</compoundname>
+      <sectiondef kind="var">
+      <memberdef kind="variable" id="namespacesetup_1ab3a7a0638d76a01367c5bc3cc699447f" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>setup.name</definition>
+        <argsstring></argsstring>
+        <name>name</name>
+        <qualifiedname>setup.name</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" line="4" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" bodystart="4" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacesetup_1a2aa722b36a933088812b50ea79b97a5c" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>setup.version</definition>
+        <argsstring></argsstring>
+        <name>version</name>
+        <qualifiedname>setup.version</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" line="5" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" bodystart="5" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacesetup_1aff2375a361fd5865c77bd9aa093be747" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>setup.packages</definition>
+        <argsstring></argsstring>
+        <name>packages</name>
+        <qualifiedname>setup.packages</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" line="6" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" bodystart="6" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacesetup_1abead4f26b530856f858f0d44c7cf2588" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>setup.install_requires</definition>
+        <argsstring></argsstring>
+        <name>install_requires</name>
+        <qualifiedname>setup.install_requires</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" line="7" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" bodystart="7" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacesetup_1ada7058afc98897f073d3f3b8b9157059" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>setup.entry_points</definition>
+        <argsstring></argsstring>
+        <name>entry_points</name>
+        <qualifiedname>setup.entry_points</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" line="15" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" bodystart="15" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacesetup_1a3a57a4772d418a06835249cbade0d86a" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>setup.author</definition>
+        <argsstring></argsstring>
+        <name>author</name>
+        <qualifiedname>setup.author</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" line="20" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" bodystart="20" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacesetup_1a5b08034343aa2be607722a8b315f3625" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>setup.author_email</definition>
+        <argsstring></argsstring>
+        <name>author_email</name>
+        <qualifiedname>setup.author_email</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" line="21" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" bodystart="21" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacesetup_1aedf461ec52a946bda975938ba0b93ec0" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>setup.description</definition>
+        <argsstring></argsstring>
+        <name>description</name>
+        <qualifiedname>setup.description</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" line="22" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" bodystart="22" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacesetup_1a4cda9dbfb952875376a0749fe08a5bde" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>setup.long_description</definition>
+        <argsstring></argsstring>
+        <name>long_description</name>
+        <qualifiedname>setup.long_description</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" line="23" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" bodystart="23" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacesetup_1a3796ea10c998699d07d391414ff5d720" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>setup.long_description_content_type</definition>
+        <argsstring></argsstring>
+        <name>long_description_content_type</name>
+        <qualifiedname>setup.long_description_content_type</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" line="24" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" bodystart="24" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacesetup_1afc13124aa5c0124e84e1d965e3f4b0fb" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>setup.url</definition>
+        <argsstring></argsstring>
+        <name>url</name>
+        <qualifiedname>setup.url</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" line="25" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" bodystart="25" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacesetup_1abe96a9c38c1c61f9f0fdb002c482f785" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>setup.classifiers</definition>
+        <argsstring></argsstring>
+        <name>classifiers</name>
+        <qualifiedname>setup.classifiers</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" line="26" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" bodystart="26" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacesetup_1aa7ca7bc9391b217e81efeb03689d8dbf" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>setup.python_requires</definition>
+        <argsstring></argsstring>
+        <name>python_requires</name>
+        <qualifiedname>setup.python_requires</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" line="31" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" bodystart="31" bodyend="-1"/>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/namespacestd.xml b/docs345/xml/namespacestd.xml
new file mode 100644
index 0000000..0f0343b
--- /dev/null
+++ b/docs345/xml/namespacestd.xml
@@ -0,0 +1,110 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacestd" kind="namespace" language="Unknown">
+    <compoundname>std</compoundname>
+    <innerclass refid="classstd_1_1allocator" prot="public">std::allocator</innerclass>
+    <innerclass refid="classstd_1_1array" prot="public">std::array</innerclass>
+    <innerclass refid="classstd_1_1atomic" prot="public">std::atomic</innerclass>
+    <innerclass refid="classstd_1_1atomic__ref" prot="public">std::atomic_ref</innerclass>
+    <innerclass refid="classstd_1_1auto__ptr" prot="public">std::auto_ptr</innerclass>
+    <innerclass refid="classstd_1_1bad__alloc" prot="public">std::bad_alloc</innerclass>
+    <innerclass refid="classstd_1_1bad__cast" prot="public">std::bad_cast</innerclass>
+    <innerclass refid="classstd_1_1bad__exception" prot="public">std::bad_exception</innerclass>
+    <innerclass refid="classstd_1_1bad__typeid" prot="public">std::bad_typeid</innerclass>
+    <innerclass refid="classstd_1_1basic__fstream" prot="public">std::basic_fstream</innerclass>
+    <innerclass refid="classstd_1_1basic__ifstream" prot="public">std::basic_ifstream</innerclass>
+    <innerclass refid="classstd_1_1basic__ios" prot="public">std::basic_ios</innerclass>
+    <innerclass refid="classstd_1_1basic__iostream" prot="public">std::basic_iostream</innerclass>
+    <innerclass refid="classstd_1_1basic__istream" prot="public">std::basic_istream</innerclass>
+    <innerclass refid="classstd_1_1basic__istringstream" prot="public">std::basic_istringstream</innerclass>
+    <innerclass refid="classstd_1_1basic__ofstream" prot="public">std::basic_ofstream</innerclass>
+    <innerclass refid="classstd_1_1basic__ostream" prot="public">std::basic_ostream</innerclass>
+    <innerclass refid="classstd_1_1basic__ostringstream" prot="public">std::basic_ostringstream</innerclass>
+    <innerclass refid="classstd_1_1basic__string" prot="public">std::basic_string</innerclass>
+    <innerclass refid="classstd_1_1basic__string__view" prot="public">std::basic_string_view</innerclass>
+    <innerclass refid="classstd_1_1basic__stringstream" prot="public">std::basic_stringstream</innerclass>
+    <innerclass refid="classstd_1_1bitset" prot="public">std::bitset</innerclass>
+    <innerclass refid="classstd_1_1complex" prot="public">std::complex</innerclass>
+    <innerclass refid="classstd_1_1deque" prot="public">std::deque</innerclass>
+    <innerclass refid="classstd_1_1domain__error" prot="public">std::domain_error</innerclass>
+    <innerclass refid="classstd_1_1error__category" prot="public">std::error_category</innerclass>
+    <innerclass refid="classstd_1_1error__code" prot="public">std::error_code</innerclass>
+    <innerclass refid="classstd_1_1error__condition" prot="public">std::error_condition</innerclass>
+    <innerclass refid="classstd_1_1exception" prot="public">std::exception</innerclass>
+    <innerclass refid="classstd_1_1forward__list" prot="public">std::forward_list</innerclass>
+    <innerclass refid="classstd_1_1fstream" prot="public">std::fstream</innerclass>
+    <innerclass refid="classstd_1_1ifstream" prot="public">std::ifstream</innerclass>
+    <innerclass refid="classstd_1_1invalid__argument" prot="public">std::invalid_argument</innerclass>
+    <innerclass refid="classstd_1_1ios" prot="public">std::ios</innerclass>
+    <innerclass refid="classstd_1_1ios__base" prot="public">std::ios_base</innerclass>
+    <innerclass refid="classstd_1_1istream" prot="public">std::istream</innerclass>
+    <innerclass refid="classstd_1_1istringstream" prot="public">std::istringstream</innerclass>
+    <innerclass refid="classstd_1_1jthread" prot="public">std::jthread</innerclass>
+    <innerclass refid="classstd_1_1length__error" prot="public">std::length_error</innerclass>
+    <innerclass refid="classstd_1_1list" prot="public">std::list</innerclass>
+    <innerclass refid="classstd_1_1lock__guard" prot="public">std::lock_guard</innerclass>
+    <innerclass refid="classstd_1_1logic__error" prot="public">std::logic_error</innerclass>
+    <innerclass refid="classstd_1_1map" prot="public">std::map</innerclass>
+    <innerclass refid="classstd_1_1multimap" prot="public">std::multimap</innerclass>
+    <innerclass refid="classstd_1_1multiset" prot="public">std::multiset</innerclass>
+    <innerclass refid="classstd_1_1mutex" prot="public">std::mutex</innerclass>
+    <innerclass refid="classstd_1_1ofstream" prot="public">std::ofstream</innerclass>
+    <innerclass refid="classstd_1_1ostream" prot="public">std::ostream</innerclass>
+    <innerclass refid="classstd_1_1ostringstream" prot="public">std::ostringstream</innerclass>
+    <innerclass refid="classstd_1_1out__of__range" prot="public">std::out_of_range</innerclass>
+    <innerclass refid="classstd_1_1overflow__error" prot="public">std::overflow_error</innerclass>
+    <innerclass refid="classstd_1_1priority__queue" prot="public">std::priority_queue</innerclass>
+    <innerclass refid="classstd_1_1queue" prot="public">std::queue</innerclass>
+    <innerclass refid="classstd_1_1range__error" prot="public">std::range_error</innerclass>
+    <innerclass refid="classstd_1_1recursive__mutex" prot="public">std::recursive_mutex</innerclass>
+    <innerclass refid="classstd_1_1recursive__timed__mutex" prot="public">std::recursive_timed_mutex</innerclass>
+    <innerclass refid="classstd_1_1runtime__error" prot="public">std::runtime_error</innerclass>
+    <innerclass refid="classstd_1_1set" prot="public">std::set</innerclass>
+    <innerclass refid="classstd_1_1shared__lock" prot="public">std::shared_lock</innerclass>
+    <innerclass refid="classstd_1_1shared__mutex" prot="public">std::shared_mutex</innerclass>
+    <innerclass refid="classstd_1_1shared__ptr" prot="public">std::shared_ptr</innerclass>
+    <innerclass refid="classstd_1_1shared__timed__mutex" prot="public">std::shared_timed_mutex</innerclass>
+    <innerclass refid="classstd_1_1smart__ptr" prot="public">std::smart_ptr</innerclass>
+    <innerclass refid="classstd_1_1span" prot="public">std::span</innerclass>
+    <innerclass refid="classstd_1_1stack" prot="public">std::stack</innerclass>
+    <innerclass refid="classstd_1_1string" prot="public">std::string</innerclass>
+    <innerclass refid="classstd_1_1string__view" prot="public">std::string_view</innerclass>
+    <innerclass refid="classstd_1_1stringstream" prot="public">std::stringstream</innerclass>
+    <innerclass refid="classstd_1_1system__error" prot="public">std::system_error</innerclass>
+    <innerclass refid="classstd_1_1thread" prot="public">std::thread</innerclass>
+    <innerclass refid="classstd_1_1timed__mutex" prot="public">std::timed_mutex</innerclass>
+    <innerclass refid="classstd_1_1u16string" prot="public">std::u16string</innerclass>
+    <innerclass refid="classstd_1_1u16string__view" prot="public">std::u16string_view</innerclass>
+    <innerclass refid="classstd_1_1u32string" prot="public">std::u32string</innerclass>
+    <innerclass refid="classstd_1_1u32string__view" prot="public">std::u32string_view</innerclass>
+    <innerclass refid="classstd_1_1u8string" prot="public">std::u8string</innerclass>
+    <innerclass refid="classstd_1_1u8string__view" prot="public">std::u8string_view</innerclass>
+    <innerclass refid="classstd_1_1underflow__error" prot="public">std::underflow_error</innerclass>
+    <innerclass refid="classstd_1_1unique__lock" prot="public">std::unique_lock</innerclass>
+    <innerclass refid="classstd_1_1unique__ptr" prot="public">std::unique_ptr</innerclass>
+    <innerclass refid="classstd_1_1unordered__map" prot="public">std::unordered_map</innerclass>
+    <innerclass refid="classstd_1_1unordered__multimap" prot="public">std::unordered_multimap</innerclass>
+    <innerclass refid="classstd_1_1unordered__multiset" prot="public">std::unordered_multiset</innerclass>
+    <innerclass refid="classstd_1_1unordered__set" prot="public">std::unordered_set</innerclass>
+    <innerclass refid="classstd_1_1valarray" prot="public">std::valarray</innerclass>
+    <innerclass refid="classstd_1_1vector" prot="public">std::vector</innerclass>
+    <innerclass refid="classstd_1_1weak__ptr" prot="public">std::weak_ptr</innerclass>
+    <innerclass refid="classstd_1_1wfstream" prot="public">std::wfstream</innerclass>
+    <innerclass refid="classstd_1_1wifstream" prot="public">std::wifstream</innerclass>
+    <innerclass refid="classstd_1_1wios" prot="public">std::wios</innerclass>
+    <innerclass refid="classstd_1_1wistream" prot="public">std::wistream</innerclass>
+    <innerclass refid="classstd_1_1wistringstream" prot="public">std::wistringstream</innerclass>
+    <innerclass refid="classstd_1_1wofstream" prot="public">std::wofstream</innerclass>
+    <innerclass refid="classstd_1_1wostream" prot="public">std::wostream</innerclass>
+    <innerclass refid="classstd_1_1wostringstream" prot="public">std::wostringstream</innerclass>
+    <innerclass refid="classstd_1_1wstring" prot="public">std::wstring</innerclass>
+    <innerclass refid="classstd_1_1wstring__view" prot="public">std::wstring_view</innerclass>
+    <innerclass refid="classstd_1_1wstringstream" prot="public">std::wstringstream</innerclass>
+    <briefdescription>
+<para>STL namespace. </para>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="[STL]" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/namespacetests.xml b/docs345/xml/namespacetests.xml
new file mode 100644
index 0000000..3b5005f
--- /dev/null
+++ b/docs345/xml/namespacetests.xml
@@ -0,0 +1,16 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacetests" kind="namespace" language="Python">
+    <compoundname>tests</compoundname>
+    <innernamespace refid="namespacetests_1_1conftest">tests::conftest</innernamespace>
+    <innernamespace refid="namespacetests_1_1test__commit__commands">tests::test_commit_commands</innernamespace>
+    <innernamespace refid="namespacetests_1_1test__config__commands">tests::test_config_commands</innernamespace>
+    <innernamespace refid="namespacetests_1_1test__doc__commands">tests::test_doc_commands</innernamespace>
+    <innernamespace refid="namespacetests_1_1test__web__config">tests::test_web_config</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/__init__.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/namespacetests_1_1conftest.xml b/docs345/xml/namespacetests_1_1conftest.xml
new file mode 100644
index 0000000..9d124cb
--- /dev/null
+++ b/docs345/xml/namespacetests_1_1conftest.xml
@@ -0,0 +1,11 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacetests_1_1conftest" kind="namespace" language="Python">
+    <compoundname>tests::conftest</compoundname>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/conftest.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/namespacetests_1_1test__commit__commands.xml b/docs345/xml/namespacetests_1_1test__commit__commands.xml
new file mode 100644
index 0000000..b7c5e1f
--- /dev/null
+++ b/docs345/xml/namespacetests_1_1test__commit__commands.xml
@@ -0,0 +1,12 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacetests_1_1test__commit__commands" kind="namespace" language="Python">
+    <compoundname>tests::test_commit_commands</compoundname>
+    <innerclass refid="classtests_1_1test__commit__commands_1_1TestCommitCommands" prot="public">tests::test_commit_commands::TestCommitCommands</innerclass>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/namespacetests_1_1test__config__commands.xml b/docs345/xml/namespacetests_1_1test__config__commands.xml
new file mode 100644
index 0000000..9443c08
--- /dev/null
+++ b/docs345/xml/namespacetests_1_1test__config__commands.xml
@@ -0,0 +1,12 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacetests_1_1test__config__commands" kind="namespace" language="Python">
+    <compoundname>tests::test_config_commands</compoundname>
+    <innerclass refid="classtests_1_1test__config__commands_1_1TestConfigCommands" prot="public">tests::test_config_commands::TestConfigCommands</innerclass>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/namespacetests_1_1test__doc__commands.xml b/docs345/xml/namespacetests_1_1test__doc__commands.xml
new file mode 100644
index 0000000..50d67cf
--- /dev/null
+++ b/docs345/xml/namespacetests_1_1test__doc__commands.xml
@@ -0,0 +1,461 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacetests_1_1test__doc__commands" kind="namespace" language="Python">
+    <compoundname>tests::test_doc_commands</compoundname>
+      <sectiondef kind="func">
+      <memberdef kind="function" id="namespacetests_1_1test__doc__commands_1a806110833eb0aad547156faf014b31d8" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_doc_commands.test_generate_doc_no_location</definition>
+        <argsstring>(mock_getcwd, mock_api_client, mock_folder_analyzer, mock_file_analyzer, mock_git_analyzer)</argsstring>
+        <name>test_generate_doc_no_location</name>
+        <qualifiedname>tests.test_doc_commands.test_generate_doc_no_location</qualifiedname>
+        <param>
+          <type>mock_getcwd</type>
+          <defname>mock_getcwd</defname>
+        </param>
+        <param>
+          <type>mock_api_client</type>
+          <defname>mock_api_client</defname>
+        </param>
+        <param>
+          <type>mock_folder_analyzer</type>
+          <defname>mock_folder_analyzer</defname>
+        </param>
+        <param>
+          <type>mock_file_analyzer</type>
+          <defname>mock_file_analyzer</defname>
+        </param>
+        <param>
+          <type>mock_git_analyzer</type>
+          <defname>mock_git_analyzer</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test function to generate documentation without location information.
+
+This function sets up mocks for the API client, current working
+directory, and Git analyzer. It then calls the `generate_doc` function
+with a fake API URL and token. The function is expected to initialize
+the API client, configure the Git analyzer, and run it without any
+location information.
+
+Args:
+    mock_getcwd (MagicMock): Mock for os.getcwd().
+    mock_api_client (MagicMock): Mock for creating an API client.
+    mock_folder_analyzer (MagicMock): Mock for folder analysis.
+    mock_file_analyzer (MagicMock): Mock for file analysis.
+    mock_git_analyzer (MagicMock): Mock for Git analyzer setup.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" line="21" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" bodystart="23" bodyend="61"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a4daac68bc563432bf25c85dc78081a25" compoundref="doc__commands_8py" startline="8" endline="73">penify_hook.commands.doc_commands.generate_doc</references>
+      </memberdef>
+      <memberdef kind="function" id="namespacetests_1_1test__doc__commands_1a0e74c920f258f442914771164fe26b45" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_doc_commands.test_generate_doc_file_location</definition>
+        <argsstring>(mock_api_client, mock_folder_analyzer, mock_file_analyzer, mock_git_analyzer)</argsstring>
+        <name>test_generate_doc_file_location</name>
+        <qualifiedname>tests.test_doc_commands.test_generate_doc_file_location</qualifiedname>
+        <param>
+          <type>mock_api_client</type>
+          <defname>mock_api_client</defname>
+        </param>
+        <param>
+          <type>mock_folder_analyzer</type>
+          <defname>mock_folder_analyzer</defname>
+        </param>
+        <param>
+          <type>mock_file_analyzer</type>
+          <defname>mock_file_analyzer</defname>
+        </param>
+        <param>
+          <type>mock_git_analyzer</type>
+          <defname>mock_git_analyzer</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test generating a documentation file location.
+
+This function tests the process of generating a documentation file
+location using mock objects for API client, folder analyzer, file
+analyzer, and Git analyzer. It sets up the necessary mocks, calls the
+`generate_doc` function with specified parameters, and asserts that the
+appropriate methods on the mock objects are called as expected.
+
+Args:
+    mock_api_client (MagicMock): Mock object for the API client.
+    mock_folder_analyzer (MagicMock): Mock object for the folder analyzer.
+    mock_file_analyzer (MagicMock): Mock object for the file analyzer.
+    mock_git_analyzer (MagicMock): Mock object for the Git analyzer.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" line="62" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" bodystart="63" bodyend="99"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a4daac68bc563432bf25c85dc78081a25" compoundref="doc__commands_8py" startline="8" endline="73">penify_hook.commands.doc_commands.generate_doc</references>
+      </memberdef>
+      <memberdef kind="function" id="namespacetests_1_1test__doc__commands_1a4bb75610e40d94d42bc169b25403c186" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_doc_commands.test_generate_doc_folder_location</definition>
+        <argsstring>(mock_api_client, mock_folder_analyzer, mock_file_analyzer, mock_git_analyzer)</argsstring>
+        <name>test_generate_doc_folder_location</name>
+        <qualifiedname>tests.test_doc_commands.test_generate_doc_folder_location</qualifiedname>
+        <param>
+          <type>mock_api_client</type>
+          <defname>mock_api_client</defname>
+        </param>
+        <param>
+          <type>mock_folder_analyzer</type>
+          <defname>mock_folder_analyzer</defname>
+        </param>
+        <param>
+          <type>mock_file_analyzer</type>
+          <defname>mock_file_analyzer</defname>
+        </param>
+        <param>
+          <type>mock_git_analyzer</type>
+          <defname>mock_git_analyzer</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test the function to generate documentation for a folder location.
+
+It sets up mock objects for API client, folder analyzer, file analyzer,
+and Git analyzer, then calls the `generate_doc` function with specified
+parameters. Finally, it asserts that the correct methods on the mock
+objects were called as expected.
+
+Args:
+    mock_api_client (MagicMock): Mock object for the API client.
+    mock_folder_analyzer (MagicMock): Mock object for the folder analyzer.
+    mock_file_analyzer (MagicMock): Mock object for the file analyzer.
+    mock_git_analyzer (MagicMock): Mock object for the Git analyzer.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" line="100" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" bodystart="101" bodyend="135"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a4daac68bc563432bf25c85dc78081a25" compoundref="doc__commands_8py" startline="8" endline="73">penify_hook.commands.doc_commands.generate_doc</references>
+      </memberdef>
+      <memberdef kind="function" id="namespacetests_1_1test__doc__commands_1aec76cc25c23476794234cdadbcaef0c0" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_doc_commands.test_generate_doc_error_handling</definition>
+        <argsstring>(mock_api_client, mock_git_analyzer, mock_exit)</argsstring>
+        <name>test_generate_doc_error_handling</name>
+        <qualifiedname>tests.test_doc_commands.test_generate_doc_error_handling</qualifiedname>
+        <param>
+          <type>mock_api_client</type>
+          <defname>mock_api_client</defname>
+        </param>
+        <param>
+          <type>mock_git_analyzer</type>
+          <defname>mock_git_analyzer</defname>
+        </param>
+        <param>
+          <type>mock_exit</type>
+          <defname>mock_exit</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Generate a documentation string for the provided code snippet using
+Google Docstring style.
+
+Short one line description: Test function to ensure proper error
+handling during API calls with GitAnalyzer.  Multiline long description:
+This test function is designed to verify that the generate_doc function
+handles exceptions correctly when an error occurs during API interaction
+with GitAnalyzer. It sets up a mock API client and a mock Git analyzer,
+causing the analyzer to raise an exception to simulate a failure
+condition. The function then asserts that the exit code is set to 1 when
+the error handling mechanism is invoked.
+
+Args:
+    mock_api_client (MagicMock): A mock object simulating the API client.
+    mock_git_analyzer (MagicMock): A mock object simulating the Git analyzer, configured to raise an
+        exception.
+    mock_exit (MagicMock): A mock object representing the exit function, which should be called
+        with an error code.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" line="136" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" bodystart="136" bodyend="168"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a4daac68bc563432bf25c85dc78081a25" compoundref="doc__commands_8py" startline="8" endline="73">penify_hook.commands.doc_commands.generate_doc</references>
+      </memberdef>
+      <memberdef kind="function" id="namespacetests_1_1test__doc__commands_1a0f27751d0ba2acfe40ef7e85bccf47d7" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_doc_commands.test_setup_docgen_parser</definition>
+        <argsstring>()</argsstring>
+        <name>test_setup_docgen_parser</name>
+        <qualifiedname>tests.test_doc_commands.test_setup_docgen_parser</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test the setup_docgen_parser function to ensure it properly configures
+the ArgumentParser for docgen options.
+
+It verifies that the parser correctly sets up docgen options and handles
+different subcommands like &apos;install-hook&apos; and &apos;uninstall-hook&apos;.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" line="169" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" bodystart="169" bodyend="199"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1doc__commands_1acc7f4ead1b11951d885fa5c151c2cbe0" compoundref="doc__commands_8py" startline="83" endline="124">penify_hook.commands.doc_commands.setup_docgen_parser</references>
+      </memberdef>
+      <memberdef kind="function" id="namespacetests_1_1test__doc__commands_1ab74688baa8c9b5ba302c2877a9789d05" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_doc_commands.test_handle_docgen_install_hook</definition>
+        <argsstring>(mock_exit, mock_get_token, mock_generate_doc, mock_uninstall_hook, mock_install_hook)</argsstring>
+        <name>test_handle_docgen_install_hook</name>
+        <qualifiedname>tests.test_doc_commands.test_handle_docgen_install_hook</qualifiedname>
+        <param>
+          <type>mock_exit</type>
+          <defname>mock_exit</defname>
+        </param>
+        <param>
+          <type>mock_get_token</type>
+          <defname>mock_get_token</defname>
+        </param>
+        <param>
+          <type>mock_generate_doc</type>
+          <defname>mock_generate_doc</defname>
+        </param>
+        <param>
+          <type>mock_uninstall_hook</type>
+          <defname>mock_uninstall_hook</defname>
+        </param>
+        <param>
+          <type>mock_install_hook</type>
+          <defname>mock_install_hook</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test the handling of the &apos;install-hook&apos; subcommand.
+
+This function sets up a mock environment where it simulates the
+execution of the &apos;install-hook&apos; subcommand. It verifies that the
+`mock_install_hook` is called with the correct arguments, while
+`mock_generate_doc` and `mock_uninstall_hook` are not called.
+
+Args:
+    mock_exit (MagicMock): Mock object for sys.exit.
+    mock_get_token (MagicMock): Mock object to simulate fetching a token.
+    mock_generate_doc (MagicMock): Mock object to simulate generating documentation.
+    mock_uninstall_hook (MagicMock): Mock object to simulate uninstalling a hook.
+    mock_install_hook (MagicMock): Mock object to simulate installing a hook.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" line="200" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" bodystart="201" bodyend="232"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a2006ab13bff718ef783868a910c0b704" compoundref="doc__commands_8py" startline="125" endline="158">penify_hook.commands.doc_commands.handle_docgen</references>
+      </memberdef>
+      <memberdef kind="function" id="namespacetests_1_1test__doc__commands_1a1458af9ad0128c3ca1263b552fd5e482" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_doc_commands.test_handle_docgen_uninstall_hook</definition>
+        <argsstring>(mock_exit, mock_get_token, mock_generate_doc, mock_uninstall_hook, mock_install_hook)</argsstring>
+        <name>test_handle_docgen_uninstall_hook</name>
+        <qualifiedname>tests.test_doc_commands.test_handle_docgen_uninstall_hook</qualifiedname>
+        <param>
+          <type>mock_exit</type>
+          <defname>mock_exit</defname>
+        </param>
+        <param>
+          <type>mock_get_token</type>
+          <defname>mock_get_token</defname>
+        </param>
+        <param>
+          <type>mock_generate_doc</type>
+          <defname>mock_generate_doc</defname>
+        </param>
+        <param>
+          <type>mock_uninstall_hook</type>
+          <defname>mock_uninstall_hook</defname>
+        </param>
+        <param>
+          <type>mock_install_hook</type>
+          <defname>mock_install_hook</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test the uninstall-hook subcommand of the handle_docgen function.
+This test case sets up a mock environment and verifies that the
+uninstall-hook is called with the correct location, while generate_doc
+and install_hook are not called.
+
+Args:
+    mock_exit (MagicMock): A mock for the exit function.
+    mock_get_token (MagicMock): A mock for the get_token function.
+    mock_generate_doc (MagicMock): A mock for the generate_doc function.
+    mock_uninstall_hook (MagicMock): A mock for the uninstall_hook function.
+    mock_install_hook (MagicMock): A mock for the install_hook function.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" line="233" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" bodystart="234" bodyend="262"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a2006ab13bff718ef783868a910c0b704" compoundref="doc__commands_8py" startline="125" endline="158">penify_hook.commands.doc_commands.handle_docgen</references>
+      </memberdef>
+      <memberdef kind="function" id="namespacetests_1_1test__doc__commands_1ab158ffa48469b6c097a7a55fcb20c21a" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_doc_commands.test_handle_docgen_generate</definition>
+        <argsstring>(mock_get_token, mock_generate_doc, mock_uninstall_hook, mock_install_hook)</argsstring>
+        <name>test_handle_docgen_generate</name>
+        <qualifiedname>tests.test_doc_commands.test_handle_docgen_generate</qualifiedname>
+        <param>
+          <type>mock_get_token</type>
+          <defname>mock_get_token</defname>
+        </param>
+        <param>
+          <type>mock_generate_doc</type>
+          <defname>mock_generate_doc</defname>
+        </param>
+        <param>
+          <type>mock_uninstall_hook</type>
+          <defname>mock_uninstall_hook</defname>
+        </param>
+        <param>
+          <type>mock_install_hook</type>
+          <defname>mock_install_hook</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test the direct documentation generation functionality.
+
+This function tests the `handle_docgen` function when no subcommand is
+provided. It verifies that the document generation hook is called and
+the uninstall and install hooks are not called.
+
+Args:
+    mock_get_token (MagicMock): Mocked function to get authentication token.
+    mock_generate_doc (MagicMock): Mocked function for generating documentation.
+    mock_uninstall_hook (MagicMock): Mocked function for uninstalling the document generation hook.
+    mock_install_hook (MagicMock): Mocked function for installing the document generation hook.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" line="263" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" bodystart="264" bodyend="290"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a2006ab13bff718ef783868a910c0b704" compoundref="doc__commands_8py" startline="125" endline="158">penify_hook.commands.doc_commands.handle_docgen</references>
+      </memberdef>
+      <memberdef kind="function" id="namespacetests_1_1test__doc__commands_1af9b01e5fc89255cac96747fa081c442c" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_doc_commands.test_handle_docgen_no_token</definition>
+        <argsstring>(mock_exit, mock_get_token)</argsstring>
+        <name>test_handle_docgen_no_token</name>
+        <qualifiedname>tests.test_doc_commands.test_handle_docgen_no_token</qualifiedname>
+        <param>
+          <type>mock_exit</type>
+          <defname>mock_exit</defname>
+        </param>
+        <param>
+          <type>mock_get_token</type>
+          <defname>mock_get_token</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test the behavior of the `handle_docgen` function when no token is
+provided.
+
+This function asserts that if no token is returned by `mock_get_token`,
+the `handle_docgen` function will call `mock_exit` with a status code of
+1.
+
+Args:
+    mock_exit (MagicMock): A MagicMock object simulating the `exit` function.
+    mock_get_token (MagicMock): A MagicMock object simulating the `get_token` function.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" line="291" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" bodystart="291" bodyend="312"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a2006ab13bff718ef783868a910c0b704" compoundref="doc__commands_8py" startline="125" endline="158">penify_hook.commands.doc_commands.handle_docgen</references>
+      </memberdef>
+      <memberdef kind="function" id="namespacetests_1_1test__doc__commands_1a335e7fd4912192c7276cf31bbebc6eb0" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_doc_commands.test_generate_doc_with_file_exception</definition>
+        <argsstring>(mock_api_client, mock_getcwd)</argsstring>
+        <name>test_generate_doc_with_file_exception</name>
+        <qualifiedname>tests.test_doc_commands.test_generate_doc_with_file_exception</qualifiedname>
+        <param>
+          <type>mock_api_client</type>
+          <defname>mock_api_client</defname>
+        </param>
+        <param>
+          <type>mock_getcwd</type>
+          <defname>mock_getcwd</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Generate documentation from a Python source file.
+
+This function reads a Python file and generates a docstring based on its
+content. It uses mock objects to simulate API calls and directory
+operations during testing.
+
+Args:
+    mock_api_client (unittest.mock.MagicMock): A mock object for simulating API client behavior.
+    mock_getcwd (unittest.mock.MagicMock): A mock object for simulating the current working directory function.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" line="313" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" bodystart="313" bodyend="335"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a4daac68bc563432bf25c85dc78081a25" compoundref="doc__commands_8py" startline="8" endline="73">penify_hook.commands.doc_commands.generate_doc</references>
+      </memberdef>
+      <memberdef kind="function" id="namespacetests_1_1test__doc__commands_1a64165ddfdb3071a88422f080f0e529a3" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_doc_commands.test_generate_doc_with_folder_exception</definition>
+        <argsstring>(mock_api_client, mock_getcwd)</argsstring>
+        <name>test_generate_doc_with_folder_exception</name>
+        <qualifiedname>tests.test_doc_commands.test_generate_doc_with_folder_exception</qualifiedname>
+        <param>
+          <type>mock_api_client</type>
+          <defname>mock_api_client</defname>
+        </param>
+        <param>
+          <type>mock_getcwd</type>
+          <defname>mock_getcwd</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Generate documentation from a given API endpoint and save it to a
+folder.
+
+This function fetches data from the specified API endpoint, processes
+it, and saves the generated documentation in the provided folder. If an
+error occurs during the fetching process, a SystemExit exception is
+raised with an appropriate message.
+
+Args:
+    api_url (str): The URL of the API endpoint from which data will be fetched.
+    token (str): The authentication token required to access the API.
+    folder_path (str): The path to the folder where the documentation will be saved.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" line="336" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" bodystart="336" bodyend="358"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a4daac68bc563432bf25c85dc78081a25" compoundref="doc__commands_8py" startline="8" endline="73">penify_hook.commands.doc_commands.generate_doc</references>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/namespacetests_1_1test__web__config.xml b/docs345/xml/namespacetests_1_1test__web__config.xml
new file mode 100644
index 0000000..d68b4d9
--- /dev/null
+++ b/docs345/xml/namespacetests_1_1test__web__config.xml
@@ -0,0 +1,12 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacetests_1_1test__web__config" kind="namespace" language="Python">
+    <compoundname>tests::test_web_config</compoundname>
+    <innerclass refid="classtests_1_1test__web__config_1_1TestWebConfig" prot="public">tests::test_web_config::TestWebConfig</innerclass>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_web_config.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/penify-cli-documentation_8md.xml b/docs345/xml/penify-cli-documentation_8md.xml
new file mode 100644
index 0000000..83e4922
--- /dev/null
+++ b/docs345/xml/penify-cli-documentation_8md.xml
@@ -0,0 +1,220 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="penify-cli-documentation_8md" kind="file" language="Markdown">
+    <compoundname>penify-cli-documentation.md</compoundname>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline><highlight class="normal">---</highlight></codeline>
+<codeline><highlight class="normal">layout:<sp/>doc</highlight></codeline>
+<codeline><highlight class="normal">title:<sp/>Streamline<sp/>Git<sp/>Commits<sp/>and<sp/>Code<sp/>Documentation<sp/>with<sp/>Penify-CLI&apos;s<sp/>Automated<sp/>Generation</highlight></codeline>
+<codeline><highlight class="normal">description:<sp/>Discover<sp/>how<sp/>Penify-CLI<sp/>automates<sp/>both<sp/>Git<sp/>commit<sp/>messages<sp/>and<sp/>code<sp/>documentation,<sp/>with<sp/>Jira<sp/>integration<sp/>and<sp/>flexible<sp/>options.<sp/>Save<sp/>time,<sp/>improve<sp/>repository<sp/>clarity,<sp/>and<sp/>boost<sp/>productivity<sp/>with<sp/>this<sp/>detailed<sp/>guide<sp/>to<sp/>usage<sp/>and<sp/>best<sp/>practices.</highlight></codeline>
+<codeline><highlight class="normal">keywords:<sp/>Penify-CLI,<sp/>Git<sp/>commit<sp/>messages,<sp/>code<sp/>documentation,<sp/>Jira<sp/>integration,<sp/>automated<sp/>documentation,<sp/>version<sp/>control,<sp/>repository<sp/>management,<sp/>developer<sp/>productivity</highlight></codeline>
+<codeline><highlight class="normal">author:<sp/>Suman<sp/>Sauarbh</highlight></codeline>
+<codeline><highlight class="normal">---</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Penify<sp/>CLI<sp/>Documentation</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Penify<sp/>CLI<sp/>is<sp/>a<sp/>powerful<sp/>tool<sp/>for<sp/>enhancing<sp/>your<sp/>development<sp/>workflow<sp/>with<sp/>AI-powered<sp/>features<sp/>like<sp/>commit<sp/>message<sp/>generation,<sp/>code<sp/>documentation,<sp/>and<sp/>JIRA<sp/>integration.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Installation</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">pip<sp/>install<sp/>penify</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Getting<sp/>Started</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">After<sp/>installation,<sp/>you<sp/>can<sp/>check<sp/>the<sp/>version<sp/>of<sp/>Penify<sp/>CLI:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>--version</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Commands<sp/>Overview</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>`commit`:<sp/>Generate<sp/>smart<sp/>commit<sp/>messages<sp/>using<sp/>local-LLM</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>`config`:<sp/>Configure<sp/>local-LLM<sp/>and<sp/>JIRA<sp/>settings</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>`login`:<sp/>Log<sp/>in<sp/>to<sp/>Penify<sp/>to<sp/>use<sp/>advanced<sp/>features</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>`docgen`:<sp/>Generate<sp/>code<sp/>documentation<sp/>for<sp/>Git<sp/>diffs,<sp/>files,<sp/>or<sp/>folders</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Detailed<sp/>Command<sp/>Documentation</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Commit<sp/>Command</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">The<sp/>`commit`<sp/>command<sp/>generates<sp/>intelligent<sp/>commit<sp/>messages<sp/>using<sp/>local<sp/>LLM<sp/>models<sp/>or<sp/>Penify<sp/>services.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Usage:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>commit<sp/>[options]</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Options:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>`-m,<sp/>--message<sp/>TEXT`:<sp/>Provide<sp/>context<sp/>for<sp/>the<sp/>commit<sp/>message<sp/>generation</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>`-e,<sp/>--terminal`:<sp/>Open<sp/>an<sp/>editor<sp/>to<sp/>modify<sp/>the<sp/>generated<sp/>commit<sp/>message<sp/>before<sp/>applying<sp/>it</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>`-d,<sp/>--description`:<sp/>Generate<sp/>a<sp/>detailed<sp/>commit<sp/>message<sp/>with<sp/>both<sp/>title<sp/>and<sp/>description</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Examples:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">**Basic<sp/>usage:**</highlight></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>commit</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">**Provide<sp/>context<sp/>for<sp/>better<sp/>results:**</highlight></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>commit<sp/>-m<sp/>&quot;Fixed<sp/>the<sp/>login<sp/>button&quot;</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">**Generate<sp/>a<sp/>detailed<sp/>commit<sp/>message<sp/>and<sp/>open<sp/>editor:**</highlight></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>commit<sp/>-e<sp/>-d</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Requirements:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>Either<sp/>a<sp/>local<sp/>LLM<sp/>configuration<sp/>(via<sp/>`penify<sp/>config<sp/>llm`)<sp/>or<sp/>Penify<sp/>login</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>For<sp/>JIRA<sp/>integration,<sp/>configure<sp/>JIRA<sp/>settings<sp/>(via<sp/>`penify<sp/>config<sp/>jira`)</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">---</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Config<sp/>Command</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">The<sp/>`config`<sp/>command<sp/>helps<sp/>you<sp/>configure<sp/>local<sp/>LLM<sp/>settings<sp/>and<sp/>JIRA<sp/>integration<sp/>for<sp/>enhanced<sp/>commit<sp/>messages.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Usage:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>config<sp/>[subcommand]</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Subcommands:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>`llm`:<sp/>Configure<sp/>local<sp/>Large<sp/>Language<sp/>Model<sp/>settings</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>`jira`:<sp/>Configure<sp/>JIRA<sp/>integration<sp/>settings</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Examples:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">**Configure<sp/>local<sp/>LLM:**</highlight></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>config<sp/>llm</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline><highlight class="normal">This<sp/>opens<sp/>a<sp/>web<sp/>interface<sp/>to<sp/>configure:</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Model<sp/>name<sp/>(e.g.,<sp/>gpt-3.5-turbo,<sp/>llama2)</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>API<sp/>base<sp/>URL<sp/>(e.g.,<sp/>https://api.openai.com/v1)</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>API<sp/>key</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">**Configure<sp/>JIRA<sp/>integration:**</highlight></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>config<sp/>jira</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline><highlight class="normal">This<sp/>opens<sp/>a<sp/>web<sp/>interface<sp/>to<sp/>configure:</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>JIRA<sp/>URL<sp/>(e.g.,<sp/>https://your-domain.atlassian.net)</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Username<sp/>(typically<sp/>your<sp/>email)</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>API<sp/>token</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">---</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Login<sp/>Command</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">The<sp/>`login`<sp/>command<sp/>authenticates<sp/>you<sp/>with<sp/>Penify<sp/>for<sp/>advanced<sp/>features<sp/>like<sp/>code<sp/>documentation<sp/>generation.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Usage:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>login</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>What<sp/>happens:</highlight></codeline>
+<codeline><highlight class="normal">1.<sp/>A<sp/>browser<sp/>window<sp/>opens<sp/>to<sp/>the<sp/>Penify<sp/>login<sp/>page</highlight></codeline>
+<codeline><highlight class="normal">2.<sp/>After<sp/>successful<sp/>login,<sp/>your<sp/>API<sp/>key<sp/>is<sp/>automatically<sp/>saved</highlight></codeline>
+<codeline><highlight class="normal">3.<sp/>The<sp/>tool<sp/>is<sp/>now<sp/>authorized<sp/>to<sp/>use<sp/>Penify&apos;s<sp/>advanced<sp/>features</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Example:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>login</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">---</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Docgen<sp/>Command</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">The<sp/>`docgen`<sp/>command<sp/>generates<sp/>documentation<sp/>for<sp/>your<sp/>code<sp/>using<sp/>Penify&apos;s<sp/>AI<sp/>services.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Usage:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>[options]<sp/>[subcommand]</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Options:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>`-l,<sp/>--location<sp/>PATH`:<sp/>Path<sp/>to<sp/>a<sp/>specific<sp/>file<sp/>or<sp/>folder<sp/>to<sp/>document<sp/>(default:<sp/>current<sp/>working<sp/>directory)</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Subcommands:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>`install-hook`:<sp/>Install<sp/>a<sp/>Git<sp/>post-commit<sp/>hook<sp/>to<sp/>automatically<sp/>generate<sp/>documentation</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>`uninstall-hook`:<sp/>Remove<sp/>the<sp/>Git<sp/>post-commit<sp/>hook</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Examples:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">**Document<sp/>current<sp/>Git<sp/>diff:**</highlight></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">**Document<sp/>a<sp/>specific<sp/>file:**</highlight></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>src/main.py</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">**Document<sp/>an<sp/>entire<sp/>folder:**</highlight></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>src/components</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">**Install<sp/>the<sp/>Git<sp/>hook<sp/>for<sp/>automatic<sp/>documentation:**</highlight></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>install-hook</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">**Uninstall<sp/>the<sp/>Git<sp/>hook:**</highlight></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>uninstall-hook</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Requirements:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>Requires<sp/>login<sp/>to<sp/>Penify<sp/>(`penify<sp/>login`)</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Configuration<sp/>Files</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Penify<sp/>CLI<sp/>stores<sp/>configuration<sp/>in<sp/>the<sp/>following<sp/>locations:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>Global<sp/>configuration:<sp/>`~/.penify`</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Project-specific<sp/>configuration:<sp/>`.penify`<sp/>in<sp/>your<sp/>Git<sp/>repository<sp/>root</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Environment<sp/>Variables</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>`PENIFY_API_TOKEN`:<sp/>Can<sp/>be<sp/>used<sp/>to<sp/>provide<sp/>the<sp/>API<sp/>token<sp/>instead<sp/>of<sp/>logging<sp/>in</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Troubleshooting</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">If<sp/>you<sp/>encounter<sp/>issues:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">1.<sp/>Check<sp/>your<sp/>configuration<sp/>with<sp/>`cat<sp/>~/.penify`</highlight></codeline>
+<codeline><highlight class="normal">2.<sp/>Verify<sp/>network<sp/>connectivity<sp/>to<sp/>API<sp/>endpoints</highlight></codeline>
+<codeline><highlight class="normal">3.<sp/>Ensure<sp/>your<sp/>API<sp/>keys<sp/>and<sp/>tokens<sp/>are<sp/>valid</highlight></codeline>
+<codeline><highlight class="normal">4.<sp/>For<sp/>JIRA<sp/>integration<sp/>issues,<sp/>verify<sp/>your<sp/>JIRA<sp/>credentials</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Additional<sp/>Resources</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">For<sp/>more<sp/>information,<sp/>visit<sp/>the<sp/>[Penify<sp/>Documentation](https://docs.penify.dev/).</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/penify-cli-documentation.md"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/penify__hook_2____init_____8py.xml b/docs345/xml/penify__hook_2____init_____8py.xml
new file mode 100644
index 0000000..d3d0335
--- /dev/null
+++ b/docs345/xml/penify__hook_2____init_____8py.xml
@@ -0,0 +1,13 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="penify__hook_2____init_____8py" kind="file" language="Python">
+    <compoundname>__init__.py</compoundname>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/__init__.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/penify__hook_2commands_2____init_____8py.xml b/docs345/xml/penify__hook_2commands_2____init_____8py.xml
new file mode 100644
index 0000000..141dfec
--- /dev/null
+++ b/docs345/xml/penify__hook_2commands_2____init_____8py.xml
@@ -0,0 +1,16 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="penify__hook_2commands_2____init_____8py" kind="file" language="Python">
+    <compoundname>__init__.py</compoundname>
+    <innernamespace refid="namespacepenify__hook">penify_hook</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1commands">penify_hook::commands</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacepenify__hook_1_1commands" refkind="compound"><highlight class="comment">#<sp/>This<sp/>file<sp/>makes<sp/>the<sp/>commands<sp/>directory<sp/>a<sp/>proper<sp/>Python<sp/>package</highlight><highlight class="normal"></highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/__init__.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/setup_8py.xml b/docs345/xml/setup_8py.xml
new file mode 100644
index 0000000..b732c20
--- /dev/null
+++ b/docs345/xml/setup_8py.xml
@@ -0,0 +1,46 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="setup_8py" kind="file" language="Python">
+    <compoundname>setup.py</compoundname>
+    <innernamespace refid="namespacesetup">setup</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacesetup" refkind="compound"><highlight class="keyword">from</highlight><highlight class="normal"><sp/>setuptools<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>setup,<sp/>find_packages</highlight></codeline>
+<codeline lineno="2"><highlight class="normal"></highlight></codeline>
+<codeline lineno="3"><highlight class="normal"><ref refid="namespacesetup" kindref="compound">setup</ref>(</highlight></codeline>
+<codeline lineno="4" refid="namespacesetup_1ab3a7a0638d76a01367c5bc3cc699447f" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>name=</highlight><highlight class="stringliteral">&quot;penify&quot;</highlight><highlight class="normal">,<sp/><sp/></highlight><highlight class="comment">#<sp/>Changed<sp/>from<sp/>&quot;penify&quot;<sp/>to<sp/>a<sp/>more<sp/>unique<sp/>name</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="5" refid="namespacesetup_1a2aa722b36a933088812b50ea79b97a5c" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>version=</highlight><highlight class="stringliteral">&quot;0.3.0&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="6" refid="namespacesetup_1aff2375a361fd5865c77bd9aa093be747" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>packages=[</highlight><highlight class="stringliteral">&apos;penify_hook&apos;</highlight><highlight class="normal">],</highlight></codeline>
+<codeline lineno="7" refid="namespacesetup_1abead4f26b530856f858f0d44c7cf2588" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>install_requires=[</highlight></codeline>
+<codeline lineno="8"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;requests&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="9"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;tqdm&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="10"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;GitPython&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="11"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;colorama&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="12"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;litellm&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="13"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;jira&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="14"><highlight class="normal"><sp/><sp/><sp/><sp/>],</highlight></codeline>
+<codeline lineno="15" refid="namespacesetup_1ada7058afc98897f073d3f3b8b9157059" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>entry_points={</highlight></codeline>
+<codeline lineno="16"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;console_scripts&quot;</highlight><highlight class="normal">:<sp/>[</highlight></codeline>
+<codeline lineno="17"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;penify=penify_hook.main:main&quot;</highlight><highlight class="normal">,<sp/><sp/></highlight><highlight class="comment">#<sp/>Command<sp/>name<sp/>remains<sp/>the<sp/>same</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="18"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>],</highlight></codeline>
+<codeline lineno="19"><highlight class="normal"><sp/><sp/><sp/><sp/>},</highlight></codeline>
+<codeline lineno="20" refid="namespacesetup_1a3a57a4772d418a06835249cbade0d86a" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>author=</highlight><highlight class="stringliteral">&quot;Suman<sp/>Saurabh&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="21" refid="namespacesetup_1a5b08034343aa2be607722a8b315f3625" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>author_email=</highlight><highlight class="stringliteral">&quot;ss.sumansaurabh92@gmail.com&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="22" refid="namespacesetup_1aedf461ec52a946bda975938ba0b93ec0" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>description=</highlight><highlight class="stringliteral">&quot;A<sp/>penify<sp/>cli<sp/>tool<sp/>to<sp/>generate<sp/>Documentation,<sp/>Commit-summary.&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="23" refid="namespacesetup_1a4cda9dbfb952875376a0749fe08a5bde" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>long_description=open(</highlight><highlight class="stringliteral">&quot;README.md&quot;</highlight><highlight class="normal">).read(),</highlight></codeline>
+<codeline lineno="24" refid="namespacesetup_1a3796ea10c998699d07d391414ff5d720" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>long_description_content_type=</highlight><highlight class="stringliteral">&quot;text/markdown&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="25" refid="namespacesetup_1afc13124aa5c0124e84e1d965e3f4b0fb" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>url=</highlight><highlight class="stringliteral">&quot;https://github.com/SingularityX-ai/penify&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="26" refid="namespacesetup_1abe96a9c38c1c61f9f0fdb002c482f785" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>classifiers=[</highlight></codeline>
+<codeline lineno="27"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;Programming<sp/>Language<sp/>::<sp/>Python<sp/>::<sp/>3&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;License<sp/>::<sp/>OSI<sp/>Approved<sp/>::<sp/>MIT<sp/>License&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;Operating<sp/>System<sp/>::<sp/>OS<sp/>Independent&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/>],</highlight></codeline>
+<codeline lineno="31" refid="namespacesetup_1aa7ca7bc9391b217e81efeb03689d8dbf" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>python_requires=</highlight><highlight class="stringliteral">&apos;&gt;=3.6&apos;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="32"><highlight class="normal">)</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/test__commit__commands_8py.xml b/docs345/xml/test__commit__commands_8py.xml
new file mode 100644
index 0000000..210ffd1
--- /dev/null
+++ b/docs345/xml/test__commit__commands_8py.xml
@@ -0,0 +1,450 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="test__commit__commands_8py" kind="file" language="Python">
+    <compoundname>test_commit_commands.py</compoundname>
+    <innerclass refid="classtests_1_1test__commit__commands_1_1TestCommitCommands" prot="public">tests::test_commit_commands::TestCommitCommands</innerclass>
+    <innernamespace refid="namespacetests">tests</innernamespace>
+    <innernamespace refid="namespacetests_1_1test__commit__commands">tests::test_commit_commands</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacetests_1_1test__commit__commands" refkind="compound"><highlight class="keyword">import</highlight><highlight class="normal"><sp/>os</highlight></codeline>
+<codeline lineno="2"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>sys</highlight></codeline>
+<codeline lineno="3"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>pytest</highlight></codeline>
+<codeline lineno="4"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>unittest.mock<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>patch,<sp/>MagicMock,<sp/>call</highlight></codeline>
+<codeline lineno="5"><highlight class="normal"></highlight></codeline>
+<codeline lineno="6"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1commands_1_1commit__commands" kindref="compound">penify_hook.commands.commit_commands</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>commit_code,<sp/>setup_commit_parser,<sp/>handle_commit</highlight></codeline>
+<codeline lineno="7"><highlight class="normal"></highlight></codeline>
+<codeline lineno="8" refid="classtests_1_1test__commit__commands_1_1TestCommitCommands" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands" kindref="compound">TestCommitCommands</ref>:</highlight></codeline>
+<codeline lineno="9"><highlight class="normal"></highlight></codeline>
+<codeline lineno="10"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@pytest.fixture</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="11" refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1abcd2354a2af4afe19e57877628d3acc2" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1abcd2354a2af4afe19e57877628d3acc2" kindref="member">mock_api_client</ref>(self):</highlight></codeline>
+<codeline lineno="12"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Mocks<sp/>an<sp/>instance<sp/>of<sp/>APIClient<sp/>using<sp/>unittest.mock.</highlight></codeline>
+<codeline lineno="13"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="14"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>creates<sp/>a<sp/>mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>APIClient<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>yields<sp/>it<sp/>along</highlight></codeline>
+<codeline lineno="15"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>the<sp/>mocked<sp/>instance.<sp/>It<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>useful<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>testing<sp/>purposes<sp/>where<sp/>real</highlight></codeline>
+<codeline lineno="16"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>API<sp/>calls<sp/>should<sp/>be<sp/>avoided.</highlight></codeline>
+<codeline lineno="17"><highlight class="normal"></highlight></codeline>
+<codeline lineno="18"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Yields:</highlight></codeline>
+<codeline lineno="19"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>tuple:<sp/>A<sp/>tuple<sp/>containing<sp/>the<sp/>mock<sp/>of<sp/>APIClient<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>the<sp/>mocked<sp/>instance<sp/>of</highlight></codeline>
+<codeline lineno="20"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>APIClient.</highlight></codeline>
+<codeline lineno="21"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="22"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="23"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>patch(</highlight><highlight class="stringliteral">&apos;penify_hook.api_client.APIClient&apos;</highlight><highlight class="normal">,<sp/>create=</highlight><highlight class="keyword">True</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>mock:</highlight></codeline>
+<codeline lineno="24"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_client_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock.return_value<sp/>=<sp/>api_client_instance</highlight></codeline>
+<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">yield</highlight><highlight class="normal"><sp/>mock,<sp/>api_client_instance</highlight></codeline>
+<codeline lineno="27"><highlight class="normal"></highlight></codeline>
+<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@pytest.fixture</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="29" refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a20e78370ff5bd6223cc1dd4323a86ea4" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a20e78370ff5bd6223cc1dd4323a86ea4" kindref="member">mock_llm_client</ref>(self):</highlight></codeline>
+<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Mock<sp/>an<sp/>instance<sp/>of<sp/>LLMClient<sp/>for<sp/>testing<sp/>purposes.</highlight></codeline>
+<codeline lineno="31"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="32"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>yields<sp/>a<sp/>mock<sp/>object<sp/>representing<sp/>an<sp/>instance<sp/>of</highlight></codeline>
+<codeline lineno="33"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>LLMClient,<sp/>which<sp/>can<sp/>be<sp/>used<sp/>to<sp/>simulate<sp/>interactions<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>a<sp/>language</highlight></codeline>
+<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>model<sp/>during<sp/>testing.<sp/>The<sp/>mock<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>patched<sp/>to<sp/>replace<sp/>the<sp/>actual</highlight></codeline>
+<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>LLMClient<sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal">from<sp/>the<sp/><ref refid="namespacepenify__hook" kindref="compound">penify_hook</ref><sp/>module.</highlight></codeline>
+<codeline lineno="36"><highlight class="normal"></highlight></codeline>
+<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Yields:</highlight></codeline>
+<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>tuple:<sp/>A<sp/>tuple<sp/>containing<sp/>two<sp/>elements:</highlight></codeline>
+<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>-<sp/>mock<sp/>(MagicMock):<sp/>The<sp/>mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>LLMClient.</highlight></codeline>
+<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>-<sp/>llm_client_instance<sp/>(MagicMock):<sp/>An<sp/>instance<sp/>of<sp/>the<sp/>mocked<sp/>LLMClient.</highlight></codeline>
+<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="42"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="43"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>patch(</highlight><highlight class="stringliteral">&apos;penify_hook.llm_client.LLMClient&apos;</highlight><highlight class="normal">,<sp/>create=</highlight><highlight class="keyword">True</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>mock:</highlight></codeline>
+<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>llm_client_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock.return_value<sp/>=<sp/>llm_client_instance</highlight></codeline>
+<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">yield</highlight><highlight class="normal"><sp/>mock,<sp/>llm_client_instance</highlight></codeline>
+<codeline lineno="47"><highlight class="normal"></highlight></codeline>
+<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@pytest.fixture</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="49" refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a05adaa9a713ff1be657455d0667bc6be" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a05adaa9a713ff1be657455d0667bc6be" kindref="member">mock_jira_client</ref>(self):</highlight></codeline>
+<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Create<sp/>a<sp/>mock<sp/>JIRA<sp/>client<sp/>for<sp/>testing<sp/>purposes.</highlight></codeline>
+<codeline lineno="51"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="52"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>yields<sp/>a<sp/>tuple<sp/>containing<sp/>a<sp/>mock<sp/>JIRA<sp/>client<sp/>instance<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>its<sp/>`is_connected`<sp/>method.<sp/>The<sp/>mock<sp/>client<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>configured<sp/>to<sp/>simulate<sp/>an</highlight></codeline>
+<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>active<sp/>connection.<sp/>This<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>useful<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>unit<sp/>tests<sp/>that<sp/>require</highlight></codeline>
+<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>interaction<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>a<sp/>JIRA<sp/>client<sp/>without<sp/>making<sp/>actual<sp/>network<sp/>calls.</highlight></codeline>
+<codeline lineno="56"><highlight class="normal"></highlight></codeline>
+<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Yields:</highlight></codeline>
+<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>tuple:<sp/>A<sp/>tuple<sp/>containing<sp/>the<sp/>mocked<sp/>JIRA<sp/>client<sp/>instance<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>its</highlight></codeline>
+<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>`is_connected`<sp/>method.</highlight></codeline>
+<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="61"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="62"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>patch(</highlight><highlight class="stringliteral">&apos;penify_hook.jira_client.JiraClient&apos;</highlight><highlight class="normal">,<sp/>create=</highlight><highlight class="keyword">True</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>mock:</highlight></codeline>
+<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_instance.is_connected.return_value<sp/>=<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock.return_value<sp/>=<sp/>jira_instance</highlight></codeline>
+<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">yield</highlight><highlight class="normal"><sp/>mock,<sp/>jira_instance</highlight></codeline>
+<codeline lineno="67"><highlight class="normal"></highlight></codeline>
+<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@pytest.fixture</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="69" refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1aa9b25a4bf692b8736164695072a398f6" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1aa9b25a4bf692b8736164695072a398f6" kindref="member">mock_commit_doc_gen</ref>(self):</highlight></codeline>
+<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Mocks<sp/>the<sp/>CommitDocGenHook<sp/>class<sp/>and<sp/>returns<sp/>a<sp/>MagicMock<sp/>instance.</highlight></codeline>
+<codeline lineno="71"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="72"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>uses<sp/>the<sp/>`patch`<sp/>decorator<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>the<sp/>`unittest.mock`<sp/>module</highlight></codeline>
+<codeline lineno="73"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>to<sp/>create<sp/>a<sp/>mock<sp/>of<sp/>the<sp/>`CommitDocGenHook`<sp/></highlight><highlight class="keyword">class</highlight><highlight class="normal">.<sp/>It<sp/>then<sp/>sets<sp/>up<sp/>this</highlight></codeline>
+<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock<sp/>to<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>a<sp/>new<sp/>`MagicMock`<sp/>instance<sp/>when<sp/>invoked.<sp/>The<sp/>function</highlight></codeline>
+<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>yields<sp/>both<sp/>the<sp/>mock<sp/>object<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>the<sp/>mocked<sp/>instance,<sp/>allowing<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>easy</highlight></codeline>
+<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>testing<sp/>of<sp/>functions<sp/>that<sp/>rely<sp/>on<sp/>`CommitDocGenHook`.</highlight></codeline>
+<codeline lineno="77"><highlight class="normal"></highlight></codeline>
+<codeline lineno="78"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>tuple:<sp/>A<sp/>tuple<sp/>containing<sp/>two<sp/>elements:</highlight></codeline>
+<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>-<sp/>mock<sp/>(patch):<sp/>The<sp/>patch<sp/>object<sp/>used<sp/>to<sp/>mock<sp/>the<sp/>`CommitDocGenHook`</highlight></codeline>
+<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">class</highlight><highlight class="normal">.</highlight></codeline>
+<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>-<sp/>doc_gen_instance<sp/>(MagicMock):<sp/>The<sp/>mocked<sp/>instance<sp/>of</highlight></codeline>
+<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>`CommitDocGenHook`.</highlight></codeline>
+<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="85"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="86"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>patch(</highlight><highlight class="stringliteral">&apos;penify_hook.commit_analyzer.CommitDocGenHook&apos;</highlight><highlight class="normal">,<sp/>create=</highlight><highlight class="keyword">True</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>mock:</highlight></codeline>
+<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>doc_gen_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock.return_value<sp/>=<sp/>doc_gen_instance</highlight></codeline>
+<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">yield</highlight><highlight class="normal"><sp/>mock,<sp/>doc_gen_instance</highlight></codeline>
+<codeline lineno="90"><highlight class="normal"></highlight></codeline>
+<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@pytest.fixture</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="92" refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a2842f456a8c0f1bf0f4def17c183c04e" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a2842f456a8c0f1bf0f4def17c183c04e" kindref="member">mock_git_folder_search</ref>(self):</highlight></codeline>
+<codeline lineno="93"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Mock<sp/>the<sp/>`recursive_search_git_folder`<sp/>function<sp/>to<sp/>return<sp/>a<sp/>predefined</highlight></codeline>
+<codeline lineno="94"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>git<sp/>folder<sp/>path.</highlight></codeline>
+<codeline lineno="95"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="96"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>uses<sp/>the<sp/>`patch`<sp/>decorator<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>the<sp/>`unittest.mock`<sp/>module</highlight></codeline>
+<codeline lineno="97"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>to<sp/>intercept<sp/>calls<sp/>to<sp/>`penify_hook.utils.recursive_search_git_folder`.</highlight></codeline>
+<codeline lineno="98"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>When<sp/>called,<sp/>it<sp/>will<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;/mock/git/folder&apos;</highlight><highlight class="normal"><sp/>instead<sp/>of<sp/>performing<sp/>an</highlight></codeline>
+<codeline lineno="99"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>actual<sp/>search.<sp/>This<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>useful<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>testing<sp/>purposes<sp/>where<sp/>you<sp/>need<sp/>a</highlight></codeline>
+<codeline lineno="100"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>consistent<sp/>response<sp/>without<sp/>interacting<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>the<sp/>file<sp/>system.</highlight></codeline>
+<codeline lineno="101"><highlight class="normal"></highlight></codeline>
+<codeline lineno="102"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Yields:</highlight></codeline>
+<codeline lineno="103"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>MagicMock:<sp/>A<sp/>mock<sp/>object<sp/>that<sp/>simulates<sp/>the<sp/>`recursive_search_git_folder`<sp/>function.</highlight></codeline>
+<codeline lineno="104"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="105"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="106"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>patch(</highlight><highlight class="stringliteral">&apos;penify_hook.utils.recursive_search_git_folder&apos;</highlight><highlight class="normal">,<sp/>create=</highlight><highlight class="keyword">True</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>mock:</highlight></codeline>
+<codeline lineno="107"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock.return_value<sp/>=<sp/></highlight><highlight class="stringliteral">&apos;/mock/git/folder&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="108"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">yield</highlight><highlight class="normal"><sp/>mock</highlight></codeline>
+<codeline lineno="109"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="110"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@pytest.fixture</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="111" refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1afafbae3c9aeb0e50a75996256c02c8be" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1afafbae3c9aeb0e50a75996256c02c8be" kindref="member">mock_print_functions</ref>(self):</highlight></codeline>
+<codeline lineno="112"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Mocks<sp/>the<sp/>print<sp/>functions<sp/>from<sp/>`penify_hook.ui_utils`<sp/>for<sp/>testing</highlight></codeline>
+<codeline lineno="113"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>purposes.</highlight></codeline>
+<codeline lineno="114"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="115"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>uses<sp/>Python&apos;s<sp/>`unittest.mock.patch`<sp/>to<sp/>replace<sp/>the<sp/>actual</highlight></codeline>
+<codeline lineno="116"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">print</highlight><highlight class="normal"><sp/>functions<sp/>(`</highlight><highlight class="keywordflow">print</highlight><highlight class="normal">`,<sp/>`print_warning`,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>`print_error`)<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>mock</highlight></codeline>
+<codeline lineno="117"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>objects.<sp/>These<sp/>mock<sp/>objects<sp/>can<sp/>be<sp/>used<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>tests<sp/>to<sp/>capture<sp/>calls<sp/>made</highlight></codeline>
+<codeline lineno="118"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>to<sp/>these<sp/></highlight><highlight class="keywordflow">print</highlight><highlight class="normal"><sp/>functions<sp/>without<sp/>actually<sp/>printing<sp/>anything.</highlight></codeline>
+<codeline lineno="119"><highlight class="normal"></highlight></codeline>
+<codeline lineno="120"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Yields:</highlight></codeline>
+<codeline lineno="121"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>tuple:<sp/>A<sp/>tuple<sp/>containing<sp/>three<sp/>mock<sp/>objects<sp/>corresponding<sp/>to<sp/>`print_info`,</highlight></codeline>
+<codeline lineno="122"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>`print_warning`,</highlight></codeline>
+<codeline lineno="123"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>`print_error`.</highlight></codeline>
+<codeline lineno="124"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="125"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="126"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>patch(</highlight><highlight class="stringliteral">&apos;penify_hook.ui_utils.print_info&apos;</highlight><highlight class="normal">,<sp/>create=</highlight><highlight class="keyword">True</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>mock_info,<sp/>\</highlight></codeline>
+<codeline lineno="127"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>patch(</highlight><highlight class="stringliteral">&apos;penify_hook.ui_utils.print_warning&apos;</highlight><highlight class="normal">,<sp/>create=</highlight><highlight class="keyword">True</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>mock_warning,<sp/>\</highlight></codeline>
+<codeline lineno="128"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>patch(</highlight><highlight class="stringliteral">&apos;penify_hook.ui_utils.print_error&apos;</highlight><highlight class="normal">,<sp/>create=</highlight><highlight class="keyword">True</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>mock_error:</highlight></codeline>
+<codeline lineno="129"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">yield</highlight><highlight class="normal"><sp/>mock_info,<sp/>mock_warning,<sp/>mock_error</highlight></codeline>
+<codeline lineno="130"><highlight class="normal"></highlight></codeline>
+<codeline lineno="131"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.api_client.APIClient&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="132"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.llm_client.LLMClient&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="133"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commit_analyzer.CommitDocGenHook&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="134"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.utils.recursive_search_git_folder&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="135"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.ui_utils.print_info&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="136"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.ui_utils.print_warning&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="137"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.ui_utils.print_error&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="138" refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1acc4b1e4189792a3f7c11d2a745f479c0" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1acc4b1e4189792a3f7c11d2a745f479c0" kindref="member">test_commit_code_with_llm_client</ref>(self,<sp/>mock_error,<sp/>mock_warning,<sp/>mock_info,<sp/></highlight></codeline>
+<codeline lineno="139"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_git_folder_search,<sp/>mock_doc_gen,<sp/></highlight></codeline>
+<codeline lineno="140"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_llm_client,<sp/>mock_api_client):</highlight></codeline>
+<codeline lineno="141"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>committing<sp/>code<sp/>using<sp/>an<sp/>LLM<sp/>client.</highlight></codeline>
+<codeline lineno="142"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="143"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>sets<sp/>up<sp/>mock<sp/>objects<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>various<sp/>components<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>then<sp/>calls</highlight></codeline>
+<codeline lineno="144"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>the<sp/>`commit_code`<sp/>function<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>specified<sp/>parameters.<sp/>It<sp/>verifies<sp/>that</highlight></codeline>
+<codeline lineno="145"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>the<sp/>correct<sp/>mocks<sp/>are<sp/>created<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>called<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>the<sp/>appropriate<sp/>arguments.</highlight></codeline>
+<codeline lineno="146"><highlight class="normal"></highlight></codeline>
+<codeline lineno="147"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="148"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_error<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>error<sp/>handling.</highlight></codeline>
+<codeline lineno="149"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_warning<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>warning<sp/>logging.</highlight></codeline>
+<codeline lineno="150"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_info<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>info<sp/>logging.</highlight></codeline>
+<codeline lineno="151"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_git_folder_search<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/>to<sp/>simulate<sp/>git<sp/>folder<sp/>search.</highlight></codeline>
+<codeline lineno="152"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_doc_gen<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>document<sp/>generation.</highlight></codeline>
+<codeline lineno="153"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_llm_client<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>LLM<sp/>client<sp/>interaction.</highlight></codeline>
+<codeline lineno="154"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_api_client<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>API<sp/>client<sp/>interaction.</highlight></codeline>
+<codeline lineno="155"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="156"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="157"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup<sp/>mocks</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="158"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="159"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_api_client.return_value<sp/>=<sp/>api_instance</highlight></codeline>
+<codeline lineno="160"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="161"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>llm_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="162"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_llm_client.return_value<sp/>=<sp/>llm_instance</highlight></codeline>
+<codeline lineno="163"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="164"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>doc_gen_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="165"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_doc_gen.return_value<sp/>=<sp/>doc_gen_instance</highlight></codeline>
+<codeline lineno="166"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="167"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_git_folder_search.return_value<sp/>=<sp/></highlight><highlight class="stringliteral">&apos;/mock/git/folder&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="168"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="169"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function<sp/>with<sp/>LLM<sp/>parameters</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="170"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1commit__commands_1a62564c4e8ad59fc46d56cb0f9122a71a" kindref="member">commit_code</ref>(</highlight></codeline>
+<codeline lineno="171"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_url=</highlight><highlight class="stringliteral">&quot;http://api.example.com&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="172"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>token=</highlight><highlight class="stringliteral">&quot;api-token&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="173"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>message=</highlight><highlight class="stringliteral">&quot;test<sp/>commit&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="174"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>open_terminal=</highlight><highlight class="keyword">False</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="175"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>generate_description=</highlight><highlight class="keyword">True</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="176"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>llm_model=</highlight><highlight class="stringliteral">&quot;gpt-4&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="177"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>llm_api_base=</highlight><highlight class="stringliteral">&quot;http://llm-api.example.com&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="178"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>llm_api_key=</highlight><highlight class="stringliteral">&quot;llm-api-key&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="179"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>)</highlight></codeline>
+<codeline lineno="180"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="181"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Verify<sp/>calls</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="182"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_api_client.assert_called_once_with(</highlight><highlight class="stringliteral">&quot;http://api.example.com&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;api-token&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="183"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_llm_client.assert_called_once_with(</highlight></codeline>
+<codeline lineno="184"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>model=</highlight><highlight class="stringliteral">&quot;gpt-4&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="185"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_base=</highlight><highlight class="stringliteral">&quot;http://llm-api.example.com&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="186"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_key=</highlight><highlight class="stringliteral">&quot;llm-api-key&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="187"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>)</highlight></codeline>
+<codeline lineno="188"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_doc_gen.assert_called_once_with(</highlight><highlight class="stringliteral">&apos;/mock/git/folder&apos;</highlight><highlight class="normal">,<sp/>api_instance,<sp/>llm_instance,<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="189"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>doc_gen_instance.run.assert_called_once_with(</highlight><highlight class="stringliteral">&quot;test<sp/>commit&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal">,<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="190"><highlight class="normal"></highlight></codeline>
+<codeline lineno="191"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.api_client.APIClient&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="192"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.llm_client.LLMClient&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="193"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.jira_client.JiraClient&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="194"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commit_analyzer.CommitDocGenHook&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="195"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.utils.recursive_search_git_folder&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="196"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.ui_utils.print_info&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="197"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.ui_utils.print_warning&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="198"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.ui_utils.print_error&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="199" refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1af9c09013055ec39ddde86b487aefcf8b" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1af9c09013055ec39ddde86b487aefcf8b" kindref="member">test_commit_code_with_jira_client</ref>(self,<sp/>mock_error,<sp/>mock_warning,<sp/>mock_info,</highlight></codeline>
+<codeline lineno="200"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_git_folder_search,<sp/>mock_doc_gen,<sp/></highlight></codeline>
+<codeline lineno="201"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_jira_client,<sp/>mock_llm_client,<sp/>mock_api_client):</highlight></codeline>
+<codeline lineno="202"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>committing<sp/>code<sp/>using<sp/>a<sp/>JIRA<sp/>client.</highlight></codeline>
+<codeline lineno="203"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="204"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>tests<sp/>the<sp/>commit_code<sp/>function<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>various<sp/>parameters,</highlight></codeline>
+<codeline lineno="205"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>including<sp/>API<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>JIRA<sp/>credentials.<sp/>It<sp/>sets<sp/>up<sp/>mock<sp/>objects<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="206"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>dependencies<sp/>such<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>the<sp/>JIRA<sp/>client,<sp/>LLM<sp/>client,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>doc<sp/>generator<sp/>to</highlight></codeline>
+<codeline lineno="207"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>simulate<sp/>the<sp/>behavior<sp/>of<sp/>the<sp/>real<sp/>classes.<sp/>The<sp/>function<sp/>then<sp/>calls</highlight></codeline>
+<codeline lineno="208"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>commit_code<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>verifies<sp/>that<sp/>the<sp/>JIRA<sp/>client<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>doc<sp/>generator<sp/>are</highlight></codeline>
+<codeline lineno="209"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>called<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>the<sp/>correct<sp/>parameters.</highlight></codeline>
+<codeline lineno="210"><highlight class="normal"></highlight></codeline>
+<codeline lineno="211"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="212"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_error<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>simulating<sp/>error<sp/>logging.</highlight></codeline>
+<codeline lineno="213"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_warning<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>simulating<sp/>warning<sp/>logging.</highlight></codeline>
+<codeline lineno="214"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_info<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>simulating<sp/>info<sp/>logging.</highlight></codeline>
+<codeline lineno="215"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_git_folder_search<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>simulating<sp/>the<sp/>git<sp/>folder<sp/>search<sp/>function.</highlight></codeline>
+<codeline lineno="216"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_doc_gen<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>simulating<sp/>the<sp/>doc<sp/>generator<sp/>function.</highlight></codeline>
+<codeline lineno="217"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_jira_client<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>simulating<sp/>the<sp/>JIRA<sp/>client<sp/></highlight><highlight class="keyword">class</highlight><highlight class="normal">.</highlight></codeline>
+<codeline lineno="218"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_llm_client<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>simulating<sp/>the<sp/>LLM<sp/>client<sp/></highlight><highlight class="keyword">class</highlight><highlight class="normal">.</highlight></codeline>
+<codeline lineno="219"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_api_client<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>simulating<sp/>the<sp/>API<sp/>client<sp/></highlight><highlight class="keyword">class</highlight><highlight class="normal">.</highlight></codeline>
+<codeline lineno="220"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="221"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="222"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup<sp/>mocks</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="223"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="224"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_api_client.return_value<sp/>=<sp/>api_instance</highlight></codeline>
+<codeline lineno="225"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="226"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>llm_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="227"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_llm_client.return_value<sp/>=<sp/>llm_instance</highlight></codeline>
+<codeline lineno="228"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="229"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="230"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_instance.is_connected.return_value<sp/>=<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="231"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_jira_client.return_value<sp/>=<sp/>jira_instance</highlight></codeline>
+<codeline lineno="232"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="233"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>doc_gen_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="234"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_doc_gen.return_value<sp/>=<sp/>doc_gen_instance</highlight></codeline>
+<codeline lineno="235"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="236"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_git_folder_search.return_value<sp/>=<sp/></highlight><highlight class="stringliteral">&apos;/mock/git/folder&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="237"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="238"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function<sp/>with<sp/>JIRA<sp/>parameters</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="239"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1commit__commands_1a62564c4e8ad59fc46d56cb0f9122a71a" kindref="member">commit_code</ref>(</highlight></codeline>
+<codeline lineno="240"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_url=</highlight><highlight class="stringliteral">&quot;http://api.example.com&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="241"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>token=</highlight><highlight class="stringliteral">&quot;api-token&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="242"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>message=</highlight><highlight class="stringliteral">&quot;test<sp/>commit&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="243"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>open_terminal=</highlight><highlight class="keyword">False</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="244"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>generate_description=</highlight><highlight class="keyword">True</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="245"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>llm_model=</highlight><highlight class="stringliteral">&quot;gpt-4&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="246"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>llm_api_base=</highlight><highlight class="stringliteral">&quot;http://llm-api.example.com&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="247"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>llm_api_key=</highlight><highlight class="stringliteral">&quot;llm-api-key&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="248"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_url=</highlight><highlight class="stringliteral">&quot;https://jira.example.com&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="249"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_user=</highlight><highlight class="stringliteral">&quot;jira-user&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="250"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_api_token=</highlight><highlight class="stringliteral">&quot;jira-token&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="251"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>)</highlight></codeline>
+<codeline lineno="252"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="253"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Verify<sp/>calls</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="254"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_jira_client.assert_called_once_with(</highlight></codeline>
+<codeline lineno="255"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_url=</highlight><highlight class="stringliteral">&quot;https://jira.example.com&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="256"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_user=</highlight><highlight class="stringliteral">&quot;jira-user&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="257"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_api_token=</highlight><highlight class="stringliteral">&quot;jira-token&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="258"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>)</highlight></codeline>
+<codeline lineno="259"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_doc_gen.assert_called_once_with(</highlight><highlight class="stringliteral">&apos;/mock/git/folder&apos;</highlight><highlight class="normal">,<sp/>api_instance,<sp/>llm_instance,<sp/>jira_instance)</highlight></codeline>
+<codeline lineno="260"><highlight class="normal"></highlight></codeline>
+<codeline lineno="261"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.api_client.APIClient&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="262"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.jira_client.JiraClient&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="263"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commit_analyzer.CommitDocGenHook&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="264"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.utils.recursive_search_git_folder&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="265"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.ui_utils.print_info&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="266"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.ui_utils.print_warning&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="267"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.ui_utils.print_error&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="268" refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1acea0d934ee0f2b914b0b893736e8fe4e" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1acea0d934ee0f2b914b0b893736e8fe4e" kindref="member">test_commit_code_with_jira_connection_failure</ref>(self,<sp/>mock_error,<sp/>mock_warning,<sp/>mock_info,</highlight></codeline>
+<codeline lineno="269"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_git_folder_search,<sp/>mock_doc_gen,</highlight></codeline>
+<codeline lineno="270"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_jira_client,<sp/>mock_api_client):</highlight></codeline>
+<codeline lineno="271"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>the<sp/>commit_code<sp/>function<sp/>when<sp/>JIRA<sp/>connection<sp/>fails.</highlight></codeline>
+<codeline lineno="272"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="273"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>tests<sp/>the<sp/>scenario<sp/>where<sp/>the<sp/>JIRA<sp/>connection<sp/>fails<sp/>during</highlight></codeline>
+<codeline lineno="274"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>a<sp/>code<sp/>commit.<sp/>It<sp/>sets<sp/>up<sp/>various<sp/>mocks<sp/>to<sp/>simulate<sp/>different<sp/>components</highlight></codeline>
+<codeline lineno="275"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>of<sp/>the<sp/>system<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>then<sp/>calls<sp/>the<sp/>`commit_code`<sp/>function<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>specific</highlight></codeline>
+<codeline lineno="276"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>parameters.<sp/>The<sp/>function<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>expected<sp/>to<sp/>handle<sp/>the<sp/>JIRA<sp/>connection</highlight></codeline>
+<codeline lineno="277"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>failure<sp/>gracefully<sp/>by<sp/>logging<sp/>an<sp/>appropriate<sp/>warning.</highlight></codeline>
+<codeline lineno="278"><highlight class="normal"></highlight></codeline>
+<codeline lineno="279"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="280"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_error<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>error<sp/>logging.</highlight></codeline>
+<codeline lineno="281"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_warning<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>warning<sp/>logging.</highlight></codeline>
+<codeline lineno="282"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_info<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>info<sp/>logging.</highlight></codeline>
+<codeline lineno="283"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_git_folder_search<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>searching<sp/>the<sp/>Git<sp/>folder.</highlight></codeline>
+<codeline lineno="284"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_doc_gen<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>generating<sp/>documentation.</highlight></codeline>
+<codeline lineno="285"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_jira_client<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>creating<sp/>a<sp/>JIRA<sp/>client.</highlight></codeline>
+<codeline lineno="286"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_api_client<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>creating<sp/>an<sp/>API<sp/>client.</highlight></codeline>
+<codeline lineno="287"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="288"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="289"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup<sp/>mocks</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="290"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="291"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_api_client.return_value<sp/>=<sp/>api_instance</highlight></codeline>
+<codeline lineno="292"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="293"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="294"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_instance.is_connected.return_value<sp/>=<sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="295"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_jira_client.return_value<sp/>=<sp/>jira_instance</highlight></codeline>
+<codeline lineno="296"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="297"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>doc_gen_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="298"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_doc_gen.return_value<sp/>=<sp/>doc_gen_instance</highlight></codeline>
+<codeline lineno="299"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="300"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_git_folder_search.return_value<sp/>=<sp/></highlight><highlight class="stringliteral">&apos;/mock/git/folder&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="301"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="302"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="303"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1commit__commands_1a62564c4e8ad59fc46d56cb0f9122a71a" kindref="member">commit_code</ref>(</highlight></codeline>
+<codeline lineno="304"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_url=</highlight><highlight class="stringliteral">&quot;http://api.example.com&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="305"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>token=</highlight><highlight class="stringliteral">&quot;api-token&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="306"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>message=</highlight><highlight class="stringliteral">&quot;test<sp/>commit&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="307"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>open_terminal=</highlight><highlight class="keyword">False</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="308"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>generate_description=</highlight><highlight class="keyword">True</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="309"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>llm_model=</highlight><highlight class="keywordtype">None</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="310"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_url=</highlight><highlight class="stringliteral">&quot;https://jira.example.com&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="311"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_user=</highlight><highlight class="stringliteral">&quot;jira-user&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="312"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_api_token=</highlight><highlight class="stringliteral">&quot;jira-token&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="313"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>)</highlight></codeline>
+<codeline lineno="314"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="315"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Verify<sp/>JIRA<sp/>warning</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="316"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_doc_gen.assert_called_once_with(</highlight><highlight class="stringliteral">&apos;/mock/git/folder&apos;</highlight><highlight class="normal">,<sp/>api_instance,<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="317"><highlight class="normal"></highlight></codeline>
+<codeline lineno="318"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.api_client.APIClient&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="319"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commit_analyzer.CommitDocGenHook&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="320"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.utils.recursive_search_git_folder&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="321"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;sys.exit&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="322"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;builtins.print&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="323" refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a43c2ff3707124aa48e8eb581106b8691" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a43c2ff3707124aa48e8eb581106b8691" kindref="member">test_commit_code_error_handling</ref>(self,<sp/>mock_print,<sp/>mock_exit,<sp/></highlight></codeline>
+<codeline lineno="324"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_git_folder_search,<sp/>mock_doc_gen,<sp/>mock_api_client):</highlight></codeline>
+<codeline lineno="325"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>the<sp/>error<sp/>handling<sp/>in<sp/>the<sp/>test_commit_code<sp/>function.</highlight></codeline>
+<codeline lineno="326"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="327"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>sets<sp/>up<sp/>mocks<sp/>to<sp/>simulate<sp/>exceptions<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>test<sp/>the<sp/>error</highlight></codeline>
+<codeline lineno="328"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>handling<sp/>of<sp/>the<sp/>commit_code<sp/>function.<sp/>It<sp/>verifies<sp/>that<sp/>the<sp/>function</highlight></codeline>
+<codeline lineno="329"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>correctly<sp/>prints<sp/>an<sp/>error<sp/>message<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>exits<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>a<sp/>status<sp/>code<sp/>of<sp/>1<sp/>when</highlight></codeline>
+<codeline lineno="330"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>an<sp/>exception<sp/>occurs<sp/>during<sp/>documentation<sp/>generation.</highlight></codeline>
+<codeline lineno="331"><highlight class="normal"></highlight></codeline>
+<codeline lineno="332"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="333"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_print<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/></highlight><highlight class="keywordflow">print</highlight><highlight class="normal"><sp/>function,<sp/>used<sp/>to<sp/>verify<sp/>error<sp/>message<sp/>output.</highlight></codeline>
+<codeline lineno="334"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_exit<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>sys.exit<sp/>function,<sp/>used<sp/>to<sp/>verify<sp/>exit<sp/>behavior.</highlight></codeline>
+<codeline lineno="335"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_git_folder_search<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>git_folder_search<sp/>function,<sp/>returning<sp/>a<sp/>mock<sp/>Git<sp/>folder</highlight></codeline>
+<codeline lineno="336"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>path.</highlight></codeline>
+<codeline lineno="337"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_doc_gen<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>doc_gen<sp/>function,<sp/>simulating<sp/>an<sp/>exception<sp/>during</highlight></codeline>
+<codeline lineno="338"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>documentation<sp/>generation.</highlight></codeline>
+<codeline lineno="339"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_api_client<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>API<sp/>client<sp/></highlight><highlight class="keyword">class</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>directly<sp/>used<sp/>but<sp/>referenced<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the</highlight></codeline>
+<codeline lineno="340"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>function<sp/>signature.</highlight></codeline>
+<codeline lineno="341"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="342"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="343"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup<sp/>mocks</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="344"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_doc_gen.side_effect<sp/>=<sp/><ref refid="classException" kindref="compound">Exception</ref>(</highlight><highlight class="stringliteral">&quot;Test<sp/>error&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="345"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_git_folder_search.return_value<sp/>=<sp/></highlight><highlight class="stringliteral">&apos;/mock/git/folder&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="346"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="347"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="348"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1commit__commands_1a62564c4e8ad59fc46d56cb0f9122a71a" kindref="member">commit_code</ref>(</highlight></codeline>
+<codeline lineno="349"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_url=</highlight><highlight class="stringliteral">&quot;http://api.example.com&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="350"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>token=</highlight><highlight class="stringliteral">&quot;api-token&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="351"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>message=</highlight><highlight class="stringliteral">&quot;test<sp/>commit&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="352"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>open_terminal=</highlight><highlight class="keyword">False</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="353"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>generate_description=</highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="354"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>)</highlight></codeline>
+<codeline lineno="355"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="356"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_print.assert_called_once_with(</highlight><highlight class="stringliteral">&quot;Error:<sp/>Test<sp/>error&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="357"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_exit.assert_called_once_with(1)</highlight></codeline>
+<codeline lineno="358"><highlight class="normal"></highlight></codeline>
+<codeline lineno="359" refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a4d04b125e102190a768f65f1948f15bc" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a4d04b125e102190a768f65f1948f15bc" kindref="member">test_setup_commit_parser</ref>(self):</highlight></codeline>
+<codeline lineno="360"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Set<sp/>up<sp/>the<sp/>argument<sp/>parser<sp/>for<sp/>the<sp/>commit<sp/>command.</highlight></codeline>
+<codeline lineno="361"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="362"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>configures<sp/>an<sp/>argument<sp/>parser<sp/>to<sp/>handle<sp/>various<sp/>options</highlight></codeline>
+<codeline lineno="363"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>committing<sp/>changes.<sp/>It<sp/>adds<sp/>three<sp/>arguments:<sp/>-<sp/></highlight><highlight class="stringliteral">&apos;-m&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;--message&apos;</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="364"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>An<sp/>optional<sp/>argument<sp/>to<sp/>specify<sp/>a<sp/>contextual<sp/>commit<sp/>message<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>a</highlight></codeline>
+<codeline lineno="365"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>default<sp/>value<sp/>of<sp/></highlight><highlight class="stringliteral">&quot;N/A&quot;</highlight><highlight class="normal">.<sp/>-<sp/></highlight><highlight class="stringliteral">&apos;-e&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;--terminal&apos;</highlight><highlight class="normal">:<sp/>A<sp/>boolean<sp/>flag<sp/>to<sp/>open</highlight></codeline>
+<codeline lineno="366"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>an<sp/>edit<sp/>terminal<sp/>before<sp/>committing.<sp/>-<sp/></highlight><highlight class="stringliteral">&apos;-d&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;--description&apos;</highlight><highlight class="normal">:<sp/>A<sp/>boolean</highlight></codeline>
+<codeline lineno="367"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>flag<sp/>that,<sp/>when<sp/>set<sp/>to<sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal">,<sp/>indicates<sp/>the<sp/>generation<sp/>of<sp/>a<sp/>commit</highlight></codeline>
+<codeline lineno="368"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>message<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>title<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>description.</highlight></codeline>
+<codeline lineno="369"><highlight class="normal"></highlight></codeline>
+<codeline lineno="370"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="371"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>parser<sp/>(MagicMock):<sp/>The<sp/>argument<sp/>parser<sp/>to<sp/>be<sp/>configured.</highlight></codeline>
+<codeline lineno="372"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="373"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="374"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>parser<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="375"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1commit__commands_1a8627583116eb78e31a4d3cdc16d2f15c" kindref="member">setup_commit_parser</ref>(parser)</highlight></codeline>
+<codeline lineno="376"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="377"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Verify<sp/>parser<sp/>configuration</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="378"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>parser.add_argument.call_count<sp/>==<sp/>3</highlight></codeline>
+<codeline lineno="379"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>parser.add_argument.assert_any_call(</highlight><highlight class="stringliteral">&quot;-m&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;--message&quot;</highlight><highlight class="normal">,<sp/>required=</highlight><highlight class="keyword">False</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;Commit<sp/>with<sp/>contextual<sp/>commit<sp/>message.&quot;</highlight><highlight class="normal">,<sp/>default=</highlight><highlight class="stringliteral">&quot;N/A&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="380"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>parser.add_argument.assert_any_call(</highlight><highlight class="stringliteral">&quot;-e&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;--terminal&quot;</highlight><highlight class="normal">,<sp/>action=</highlight><highlight class="stringliteral">&quot;store_true&quot;</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;Open<sp/>edit<sp/>terminal<sp/>before<sp/>committing.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="381"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>parser.add_argument.assert_any_call(</highlight><highlight class="stringliteral">&quot;-d&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;--description&quot;</highlight><highlight class="normal">,<sp/>action=</highlight><highlight class="stringliteral">&quot;store_false&quot;</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;It<sp/>will<sp/>generate<sp/>commit<sp/>message<sp/>with<sp/>title<sp/>and<sp/>description.&quot;</highlight><highlight class="normal">,<sp/>default=</highlight><highlight class="keyword">False</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="382"><highlight class="normal"></highlight></codeline>
+<codeline lineno="383"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.commit_commands.get_token&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="384"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.commit_commands.get_jira_config&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="385"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.commit_commands.get_llm_config&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="386"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.commit_commands.commit_code&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="387"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.commit_commands.print_info&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="388"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.constants.API_URL&apos;,<sp/>&quot;http://api.example.com&quot;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="389" refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1ac13e368262340af98b30fd8ebdac6597" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1ac13e368262340af98b30fd8ebdac6597" kindref="member">test_handle_commit</ref>(self,<sp/>mock_print_info,<sp/>mock_commit_code,<sp/>mock_get_token,<sp/></highlight></codeline>
+<codeline lineno="390"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_llm_config,<sp/>mock_get_jira_config):</highlight></codeline>
+<codeline lineno="391"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>the<sp/>handle_commit<sp/>function<sp/>with<sp/>various<sp/>mock<sp/>objects.</highlight></codeline>
+<codeline lineno="392"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="393"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>sets<sp/>up<sp/>mocks<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>retrieving<sp/>LLM<sp/>configuration,<sp/>JIRA</highlight></codeline>
+<codeline lineno="394"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>configuration,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>commit<sp/>code.<sp/>It<sp/>then<sp/>creates<sp/>an<sp/>argument<sp/>object<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="395"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>calls<sp/>the<sp/>handle_commit<sp/>function.<sp/>Finally,<sp/>it<sp/>verifies<sp/>that<sp/>the<sp/>mock</highlight></codeline>
+<codeline lineno="396"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>functions<sp/>were<sp/>called<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>the<sp/>expected<sp/>arguments.</highlight></codeline>
+<codeline lineno="397"><highlight class="normal"></highlight></codeline>
+<codeline lineno="398"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="399"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_print_info<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>printing<sp/>information.</highlight></codeline>
+<codeline lineno="400"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_commit_code<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>committing<sp/>code.</highlight></codeline>
+<codeline lineno="401"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_token<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>retrieving<sp/>API<sp/>token.</highlight></codeline>
+<codeline lineno="402"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_llm_config<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>retrieving<sp/>LLM<sp/>configuration.</highlight></codeline>
+<codeline lineno="403"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_jira_config<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>retrieving<sp/>JIRA<sp/>configuration.</highlight></codeline>
+<codeline lineno="404"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="405"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="406"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup<sp/>mocks</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="407"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_llm_config.return_value<sp/>=<sp/>{</highlight></codeline>
+<codeline lineno="408"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;model&apos;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&apos;test-model&apos;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="409"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;api_base&apos;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&apos;http://llm-api.example.com&apos;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="410"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;api_key&apos;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&apos;llm-key&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="411"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="412"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_token.return_value<sp/>=<sp/></highlight><highlight class="stringliteral">&apos;api-token&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="413"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_jira_config.return_value<sp/>=<sp/>{</highlight></codeline>
+<codeline lineno="414"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;url&apos;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&apos;https://jira.example.com&apos;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="415"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;username&apos;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&apos;jira-user&apos;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="416"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;api_token&apos;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&apos;jira-token&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="417"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="418"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="419"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Create<sp/>args</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="420"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>args<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="421"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>args.message<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;test<sp/>commit&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="422"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>args.terminal<sp/>=<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="423"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>args.description<sp/>=<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="424"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="425"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="426"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1commit__commands_1af4f739f524c38b437e4e47673d683e23" kindref="member">handle_commit</ref>(args)</highlight></codeline>
+<codeline lineno="427"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="428"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Verify</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="429"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_print_info.assert_called_with(</highlight><highlight class="stringliteral">&quot;Generate<sp/>Commit<sp/>Description:<sp/>True&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="430"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_commit_code.assert_called_once_with(</highlight></codeline>
+<codeline lineno="431"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;http://api.example.com&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;api-token&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;test<sp/>commit&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal">,<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="432"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;test-model&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;http://llm-api.example.com&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;llm-key&apos;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="433"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;https://jira.example.com&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;jira-user&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;jira-token&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="434"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>)</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/test__config__commands_8py.xml b/docs345/xml/test__config__commands_8py.xml
new file mode 100644
index 0000000..cd7b938
--- /dev/null
+++ b/docs345/xml/test__config__commands_8py.xml
@@ -0,0 +1,465 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="test__config__commands_8py" kind="file" language="Python">
+    <compoundname>test_config_commands.py</compoundname>
+    <innerclass refid="classtests_1_1test__config__commands_1_1TestConfigCommands" prot="public">tests::test_config_commands::TestConfigCommands</innerclass>
+    <innernamespace refid="namespacetests">tests</innernamespace>
+    <innernamespace refid="namespacetests_1_1test__config__commands">tests::test_config_commands</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacetests_1_1test__config__commands" refkind="compound"><highlight class="keyword">import</highlight><highlight class="normal"><sp/>os</highlight></codeline>
+<codeline lineno="2"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>json</highlight></codeline>
+<codeline lineno="3"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>pytest</highlight></codeline>
+<codeline lineno="4"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>unittest.mock<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>patch,<sp/>mock_open,<sp/>MagicMock</highlight></codeline>
+<codeline lineno="5"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>pathlib<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>Path</highlight></codeline>
+<codeline lineno="6"><highlight class="normal"></highlight></codeline>
+<codeline lineno="7"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands" kindref="compound">penify_hook.commands.config_commands</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>(</highlight></codeline>
+<codeline lineno="8"><highlight class="normal"><sp/><sp/><sp/><sp/>get_penify_config,<sp/></highlight></codeline>
+<codeline lineno="9"><highlight class="normal"><sp/><sp/><sp/><sp/>get_llm_config,<sp/></highlight></codeline>
+<codeline lineno="10"><highlight class="normal"><sp/><sp/><sp/><sp/>get_jira_config,<sp/></highlight></codeline>
+<codeline lineno="11"><highlight class="normal"><sp/><sp/><sp/><sp/>save_llm_config,<sp/></highlight></codeline>
+<codeline lineno="12"><highlight class="normal"><sp/><sp/><sp/><sp/>save_jira_config,</highlight></codeline>
+<codeline lineno="13"><highlight class="normal"><sp/><sp/><sp/><sp/>get_token</highlight></codeline>
+<codeline lineno="14"><highlight class="normal">)</highlight></codeline>
+<codeline lineno="15"><highlight class="normal"></highlight></codeline>
+<codeline lineno="16" refid="classtests_1_1test__config__commands_1_1TestConfigCommands" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__config__commands_1_1TestConfigCommands" kindref="compound">TestConfigCommands</ref>:</highlight></codeline>
+<codeline lineno="17"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="18"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.config_commands.recursive_search_git_folder&apos;)</highlight><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">#<sp/>Updated<sp/>patch<sp/>path<sp/>here</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="19"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.config_commands.Path&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="20"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;os.makedirs&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="21"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;builtins.open&apos;,<sp/>new_callable=mock_open)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="22" refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a2e8162082bcdd5652bb37bdb14cf453a" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a2e8162082bcdd5652bb37bdb14cf453a" kindref="member">test_get_penify_config_existing_dir</ref>(self,<sp/>mock_file_open,<sp/>mock_makedirs,<sp/>mock_path,<sp/>mock_git_folder):</highlight></codeline>
+<codeline lineno="23"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>the<sp/>get_penify_config<sp/>function<sp/>when<sp/>the<sp/>.penify<sp/>config<sp/>directory</highlight></codeline>
+<codeline lineno="24"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>exists.</highlight></codeline>
+<codeline lineno="25"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="26"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>It<sp/>should<sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>create<sp/>a<sp/>new<sp/>directory<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>that<sp/>all<sp/>mocked</highlight></codeline>
+<codeline lineno="27"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>functions<sp/>were<sp/>called<sp/>correctly.</highlight></codeline>
+<codeline lineno="28"><highlight class="normal"></highlight></codeline>
+<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_open<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/>simulating<sp/>the<sp/>open()<sp/>function.</highlight></codeline>
+<codeline lineno="31"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_makedirs<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/>simulating<sp/>the<sp/>os.makedirs()<sp/>function.</highlight></codeline>
+<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_path<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/>simulating<sp/>the<sp/>Path<sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal">from<sp/>pathlib<sp/>module.</highlight></codeline>
+<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_git_folder<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/>simulating<sp/>the<sp/>git_folder_search()<sp/>function.</highlight></codeline>
+<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="35"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="36"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Mock<sp/>git<sp/>folder<sp/>search</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_git_folder.return_value<sp/>=<sp/></highlight><highlight class="stringliteral">&apos;/mock/git/folder&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Mock<sp/>Path<sp/>operations</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_path_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_path.return_value<sp/>=<sp/>mock_path_instance</highlight></codeline>
+<codeline lineno="42"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_path_instance.__truediv__.return_value<sp/>=<sp/>mock_path_instance</highlight></codeline>
+<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Path<sp/>exists<sp/>for<sp/>.penify<sp/>dir</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_path_instance.exists.return_value<sp/>=<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>=<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a6559a82d0bf727703d550d1003d3ed20" kindref="member">get_penify_config</ref>()</highlight></codeline>
+<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Assertions</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_git_folder.assert_called_once_with(os.getcwd())</highlight></codeline>
+<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_path.assert_called_once_with(</highlight><highlight class="stringliteral">&apos;/mock/git/folder&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_path_instance.__truediv__.assert_called_with(</highlight><highlight class="stringliteral">&apos;.penify&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>mock_makedirs.call_count<sp/>==<sp/>0<sp/><sp/></highlight><highlight class="comment">#<sp/>Should<sp/>not<sp/>create<sp/>directory</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.utils.recursive_search_git_folder&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.config_commands.Path&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;os.makedirs&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;builtins.open&apos;,<sp/>new_callable=mock_open)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="60" refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a33d4760eee3b67e1cde3aed755ebb948" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a33d4760eee3b67e1cde3aed755ebb948" kindref="member">test_get_penify_config_new_dir</ref>(self,<sp/>mock_file_open,<sp/>mock_makedirs,<sp/>mock_path,<sp/>mock_git_folder):</highlight></codeline>
+<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>the<sp/>behavior<sp/>of<sp/>get_penify_config<sp/>when<sp/>the<sp/>.penify<sp/>directory<sp/>does</highlight></codeline>
+<codeline lineno="62"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>exist.</highlight></codeline>
+<codeline lineno="63"><highlight class="normal"></highlight></codeline>
+<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>mocks<sp/>various<sp/>system<sp/>calls<sp/>to<sp/>simulate<sp/>a<sp/>scenario<sp/>where</highlight></codeline>
+<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>the<sp/>.penify<sp/>directory<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>present.<sp/>It<sp/>then<sp/>asserts<sp/>that<sp/>the</highlight></codeline>
+<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>appropriate<sp/>actions<sp/>are<sp/>taken<sp/>to<sp/>create<sp/>the<sp/>directory<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>write<sp/>an<sp/>empty</highlight></codeline>
+<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>JSON<sp/>file.</highlight></codeline>
+<codeline lineno="68"><highlight class="normal"></highlight></codeline>
+<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_open<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/>simulating<sp/>the<sp/>`open`<sp/>function.</highlight></codeline>
+<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_makedirs<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/>simulating<sp/>the<sp/>`os.makedirs`<sp/>function.</highlight></codeline>
+<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_path<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/>simulating<sp/>the<sp/>`Path`<sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal">from<sp/>`pathlib`.</highlight></codeline>
+<codeline lineno="73"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_git_folder<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/>simulating<sp/>a<sp/>git<sp/>folder<sp/>search<sp/>function.</highlight></codeline>
+<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="75"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="76"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Mock<sp/>git<sp/>folder<sp/>search</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_git_folder.return_value<sp/>=<sp/></highlight><highlight class="stringliteral">&apos;/mock/git/folder&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="78"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Mock<sp/>Path<sp/>operations</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_path_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_path.return_value<sp/>=<sp/>mock_path_instance</highlight></codeline>
+<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_path_instance.__truediv__.return_value<sp/>=<sp/>mock_path_instance</highlight></codeline>
+<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Path<sp/>doesn&apos;t<sp/>exist<sp/>for<sp/>.penify<sp/>dir</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="85"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_path_instance.exists.side_effect<sp/>=<sp/>[</highlight><highlight class="keyword">False</highlight><highlight class="normal">,<sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal">]</highlight></codeline>
+<codeline lineno="86"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>=<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a6559a82d0bf727703d550d1003d3ed20" kindref="member">get_penify_config</ref>()</highlight></codeline>
+<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="90"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Assertions</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_makedirs.assert_called_with(mock_path_instance,<sp/>exist_ok=</highlight><highlight class="keyword">True</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="92"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_open.assert_called_once()</highlight></codeline>
+<codeline lineno="93"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_open().write.assert_called_once_with(</highlight><highlight class="stringliteral">&apos;{}&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="94"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="95"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.config_commands.get_penify_config&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="96"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;builtins.open&apos;,<sp/>new_callable=mock_open,<sp/>read_data=&apos;{&quot;llm&quot;:<sp/>{&quot;model&quot;:<sp/>&quot;gpt-4&quot;,<sp/>&quot;api_base&quot;:<sp/>&quot;https://api.openai.com&quot;,<sp/>&quot;api_key&quot;:<sp/>&quot;test-key&quot;}}&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="97" refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1adf9f2233a3f4cc5725b9d4f05758b167" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1adf9f2233a3f4cc5725b9d4f05758b167" kindref="member">test_get_llm_config_exists</ref>(self,<sp/>mock_file_open,<sp/>mock_get_config):</highlight></codeline>
+<codeline lineno="98"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>the<sp/>get_llm_config<sp/>function<sp/>when<sp/>the<sp/>configuration<sp/>file<sp/>exists.</highlight></codeline>
+<codeline lineno="99"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="100"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>sets<sp/>up<sp/>a<sp/>mock<sp/>configuration<sp/>file<sp/>that<sp/>exists<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>returns</highlight></codeline>
+<codeline lineno="101"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>it<sp/>when<sp/>called.<sp/>It<sp/>then<sp/>calls<sp/>the<sp/>get_llm_config<sp/>function<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>asserts</highlight></codeline>
+<codeline lineno="102"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>that<sp/>it<sp/>returns<sp/>the<sp/>correct<sp/>configuration<sp/>dictionary.<sp/>Additionally,<sp/>it</highlight></codeline>
+<codeline lineno="103"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>checks<sp/>that<sp/>the<sp/>mock_file_open<sp/>function<sp/>was<sp/>called<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>the<sp/>correct</highlight></codeline>
+<codeline lineno="104"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>arguments.</highlight></codeline>
+<codeline lineno="105"><highlight class="normal"></highlight></codeline>
+<codeline lineno="106"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="107"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_open<sp/>(MagicMock):<sp/>A<sp/>mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>open()<sp/>function.</highlight></codeline>
+<codeline lineno="108"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_config<sp/>(MagicMock):<sp/>A<sp/>mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>get_config()<sp/>function.</highlight></codeline>
+<codeline lineno="109"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="110"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="111"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup<sp/>mock</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="112"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_config_file<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="113"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_config_file.exists.return_value<sp/>=<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="114"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_config.return_value<sp/>=<sp/>mock_config_file</highlight></codeline>
+<codeline lineno="115"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="116"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="117"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>=<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a6492bc8e7df6e38bb06ad05e572d4cc0" kindref="member">get_llm_config</ref>()</highlight></codeline>
+<codeline lineno="118"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="119"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Assertions</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="120"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>result<sp/>==<sp/>{</highlight></codeline>
+<codeline lineno="121"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;model&apos;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&apos;gpt-4&apos;</highlight><highlight class="normal">,<sp/></highlight></codeline>
+<codeline lineno="122"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;api_base&apos;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&apos;https://api.openai.com&apos;</highlight><highlight class="normal">,<sp/></highlight></codeline>
+<codeline lineno="123"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;api_key&apos;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&apos;test-key&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="124"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="125"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_open.assert_called_once_with(mock_config_file,<sp/></highlight><highlight class="stringliteral">&apos;r&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="126"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="127"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.config_commands.get_penify_config&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="128"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;builtins.open&apos;,<sp/>new_callable=mock_open,<sp/>read_data=&apos;{}&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="129" refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1abd12f028b89aa9cd1152c0b9ece5d3cd" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1abd12f028b89aa9cd1152c0b9ece5d3cd" kindref="member">test_get_llm_config_empty</ref>(self,<sp/>mock_file_open,<sp/>mock_get_config):</highlight></codeline>
+<codeline lineno="130"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>the<sp/>behavior<sp/>of<sp/>get_llm_config<sp/>when<sp/>called<sp/>with<sp/>an<sp/>empty</highlight></codeline>
+<codeline lineno="131"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>configuration<sp/>file.</highlight></codeline>
+<codeline lineno="132"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="133"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>sets<sp/>up<sp/>a<sp/>mock<sp/>configuration<sp/>file<sp/>that<sp/>exists<sp/>but<sp/>returns</highlight></codeline>
+<codeline lineno="134"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>no<sp/>content.<sp/>It<sp/>then<sp/>calls<sp/>the<sp/>`get_llm_config`<sp/>function<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>asserts<sp/>that</highlight></codeline>
+<codeline lineno="135"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>it<sp/>returns<sp/>an<sp/>empty<sp/>dictionary<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>that<sp/>the<sp/>file<sp/>open<sp/>method<sp/>was<sp/>called</highlight></codeline>
+<codeline lineno="136"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>exactly<sp/>once<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>the<sp/>correct<sp/>arguments.</highlight></codeline>
+<codeline lineno="137"><highlight class="normal"></highlight></codeline>
+<codeline lineno="138"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="139"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_open<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/>simulating<sp/>the<sp/>built-</highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>open<sp/>function.</highlight></codeline>
+<codeline lineno="140"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_config<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/>simulating<sp/>the<sp/>get_config<sp/>function.</highlight></codeline>
+<codeline lineno="141"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="142"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="143"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup<sp/>mock</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="144"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_config_file<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="145"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_config_file.exists.return_value<sp/>=<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="146"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_config.return_value<sp/>=<sp/>mock_config_file</highlight></codeline>
+<codeline lineno="147"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="148"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="149"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>=<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a6492bc8e7df6e38bb06ad05e572d4cc0" kindref="member">get_llm_config</ref>()</highlight></codeline>
+<codeline lineno="150"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="151"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Assertions</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="152"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>result<sp/>==<sp/>{}</highlight></codeline>
+<codeline lineno="153"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_open.assert_called_once_with(mock_config_file,<sp/></highlight><highlight class="stringliteral">&apos;r&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="154"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="155"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.config_commands.get_penify_config&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="156"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;builtins.open&apos;,<sp/>new_callable=mock_open,<sp/>read_data=&apos;invalid<sp/>json&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="157"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;builtins.print&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="158" refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a473984d31452b56acd6ce4011a1248bd" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a473984d31452b56acd6ce4011a1248bd" kindref="member">test_get_llm_config_invalid_json</ref>(self,<sp/>mock_print,<sp/>mock_file_open,<sp/>mock_get_config):</highlight></codeline>
+<codeline lineno="159"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>function<sp/>to<sp/>verify<sp/>the<sp/>behavior<sp/>of<sp/>get_llm_config<sp/>when<sp/>reading<sp/>an</highlight></codeline>
+<codeline lineno="160"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>invalid<sp/>JSON<sp/>file.</highlight></codeline>
+<codeline lineno="161"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="162"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>It<sp/>sets<sp/>up<sp/>a<sp/>mock<sp/>configuration<sp/>file<sp/>that<sp/>exists<sp/>but<sp/>contains<sp/>invalid</highlight></codeline>
+<codeline lineno="163"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>JSON.<sp/>The<sp/>function<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>expected<sp/>to<sp/>handle<sp/>this<sp/>gracefully<sp/>by<sp/>printing<sp/>an</highlight></codeline>
+<codeline lineno="164"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>error<sp/>message<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>returning<sp/>an<sp/>empty<sp/>dictionary.</highlight></codeline>
+<codeline lineno="165"><highlight class="normal"></highlight></codeline>
+<codeline lineno="166"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="167"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_print<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/></highlight><highlight class="keywordflow">print</highlight><highlight class="normal"><sp/>function.</highlight></codeline>
+<codeline lineno="168"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_open<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>open<sp/>function.</highlight></codeline>
+<codeline lineno="169"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_config<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>get_config<sp/>function,<sp/>which<sp/>returns<sp/>the<sp/>mock<sp/>configuration</highlight></codeline>
+<codeline lineno="170"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>file.</highlight></codeline>
+<codeline lineno="171"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="172"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="173"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup<sp/>mock</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="174"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_config_file<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="175"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_config_file.exists.return_value<sp/>=<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="176"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_config.return_value<sp/>=<sp/>mock_config_file</highlight></codeline>
+<codeline lineno="177"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="178"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="179"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>=<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a6492bc8e7df6e38bb06ad05e572d4cc0" kindref="member">get_llm_config</ref>()</highlight></codeline>
+<codeline lineno="180"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="181"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Assertions</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="182"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>result<sp/>==<sp/>{}</highlight></codeline>
+<codeline lineno="183"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_print.assert_called_once()</highlight></codeline>
+<codeline lineno="184"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;Error<sp/>reading<sp/>.penify<sp/>config<sp/>file&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>mock_print.call_args[0][0]</highlight></codeline>
+<codeline lineno="185"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="186"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.config_commands.get_penify_config&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="187"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;builtins.open&apos;,<sp/>new_callable=mock_open,<sp/>read_data=&apos;{&quot;jira&quot;:<sp/>{&quot;url&quot;:<sp/>&quot;https://jira.example.com&quot;,<sp/>&quot;username&quot;:<sp/>&quot;user&quot;,<sp/>&quot;api_token&quot;:<sp/>&quot;token&quot;}}&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="188" refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1aee37b97432821d19758c6325d4c74bcf" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1aee37b97432821d19758c6325d4c74bcf" kindref="member">test_get_jira_config_exists</ref>(self,<sp/>mock_file_open,<sp/>mock_get_config):</highlight></codeline>
+<codeline lineno="189"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>that<sp/>get_jira_config<sp/>returns<sp/>the<sp/>correct<sp/>JIRA<sp/>configuration<sp/>when</highlight></codeline>
+<codeline lineno="190"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>the<sp/>configuration<sp/>file<sp/>exists.</highlight></codeline>
+<codeline lineno="191"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="192"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>It<sp/>sets<sp/>up<sp/>a<sp/>mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>configuration<sp/>file<sp/>to<sp/>simulate<sp/>its<sp/>existence</highlight></codeline>
+<codeline lineno="193"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>verifies<sp/>that<sp/>the<sp/>function<sp/>reads<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>the<sp/>correct<sp/>file<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>returns</highlight></codeline>
+<codeline lineno="194"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>the<sp/>expected<sp/>JIRA<sp/>configuration<sp/>dictionary.<sp/>Additionally,<sp/>it<sp/>checks<sp/>that</highlight></codeline>
+<codeline lineno="195"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>the<sp/>mock<sp/>file<sp/>open<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>called<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>the<sp/>appropriate<sp/>arguments.</highlight></codeline>
+<codeline lineno="196"><highlight class="normal"></highlight></codeline>
+<codeline lineno="197"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="198"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_open<sp/>(MagicMock):<sp/>A<sp/>mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>`open`<sp/>function.</highlight></codeline>
+<codeline lineno="199"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_config<sp/>(MagicMock):<sp/>A<sp/>mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>`get_config`<sp/>function,<sp/>which<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>expected<sp/>to<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>a<sp/>mock</highlight></codeline>
+<codeline lineno="200"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>configuration<sp/>file<sp/>object.</highlight></codeline>
+<codeline lineno="201"><highlight class="normal"></highlight></codeline>
+<codeline lineno="202"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="203"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">:<sp/>This<sp/>test<sp/>function<sp/>does<sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>explicitly<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>anything.<sp/>Its<sp/>assertions</highlight></codeline>
+<codeline lineno="204"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>serve<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>the<sp/>verification<sp/>of<sp/>its<sp/>correctness.</highlight></codeline>
+<codeline lineno="205"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="206"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="207"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup<sp/>mock</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="208"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_config_file<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="209"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_config_file.exists.return_value<sp/>=<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="210"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_config.return_value<sp/>=<sp/>mock_config_file</highlight></codeline>
+<codeline lineno="211"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="212"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="213"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>=<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a15bf3685c4dcb5c15ba6a4055e484cf2" kindref="member">get_jira_config</ref>()</highlight></codeline>
+<codeline lineno="214"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="215"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Assertions</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="216"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>result<sp/>==<sp/>{</highlight></codeline>
+<codeline lineno="217"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;url&apos;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&apos;https://jira.example.com&apos;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="218"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;username&apos;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&apos;user&apos;</highlight><highlight class="normal">,<sp/></highlight></codeline>
+<codeline lineno="219"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;api_token&apos;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&apos;token&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="220"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="221"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_open.assert_called_once_with(mock_config_file,<sp/></highlight><highlight class="stringliteral">&apos;r&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="222"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="223"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.config_commands.get_penify_config&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="224"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;builtins.open&apos;,<sp/>new_callable=mock_open)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="225"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;json.dump&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="226"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;builtins.print&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="227" refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1acd8df8219441b9e9871b903a681400d9" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1acd8df8219441b9e9871b903a681400d9" kindref="member">test_save_llm_config_success</ref>(self,<sp/>mock_print,<sp/>mock_json_dump,<sp/>mock_file_open,<sp/>mock_get_config):</highlight></codeline>
+<codeline lineno="228"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>the<sp/>save_llm_config<sp/>function<sp/>successfully.</highlight></codeline>
+<codeline lineno="229"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="230"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>tests<sp/>that<sp/>the<sp/>save_llm_config<sp/>function<sp/>correctly<sp/>saves<sp/>an</highlight></codeline>
+<codeline lineno="231"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>LLM<sp/>configuration<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>handles<sp/>various<sp/>mock<sp/>objects<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>side<sp/>effects.<sp/>It</highlight></codeline>
+<codeline lineno="232"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>ensures<sp/>that<sp/>the<sp/>function<sp/>returns<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"><sp/>upon<sp/>successful<sp/>execution,<sp/>writes</highlight></codeline>
+<codeline lineno="233"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>the<sp/>expected<sp/>configuration<sp/>to<sp/>a<sp/>file,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>prints<sp/>a<sp/>confirmation<sp/>message.</highlight></codeline>
+<codeline lineno="234"><highlight class="normal"></highlight></codeline>
+<codeline lineno="235"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="236"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_print<sp/>(MagicMock):<sp/>A<sp/>mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/></highlight><highlight class="keywordflow">print</highlight><highlight class="normal"><sp/>function.</highlight></codeline>
+<codeline lineno="237"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_json_dump<sp/>(MagicMock):<sp/>A<sp/>mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>json.dump.</highlight></codeline>
+<codeline lineno="238"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_open<sp/>(MagicMock):<sp/>A<sp/>mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>file<sp/>opening.</highlight></codeline>
+<codeline lineno="239"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_config<sp/>(MagicMock):<sp/>A<sp/>mock<sp/>object<sp/>to<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>a<sp/>configuration<sp/>file<sp/>mock.</highlight></codeline>
+<codeline lineno="240"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="241"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="242"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup<sp/>mock</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="243"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_config_file<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="244"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_config.return_value<sp/>=<sp/>mock_config_file</highlight></codeline>
+<codeline lineno="245"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_open.return_value.__enter__.return_value<sp/>=<sp/>mock_file_open</highlight></codeline>
+<codeline lineno="246"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="247"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Mock<sp/>json.load<sp/>to<sp/>return<sp/>empty<sp/>dict<sp/>when<sp/>reading</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="248"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>patch(</highlight><highlight class="stringliteral">&apos;json.load&apos;</highlight><highlight class="normal">,<sp/>return_value={}):</highlight></codeline>
+<codeline lineno="249"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="250"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>=<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a4617bc5956e502c9555dc0dda0376df4" kindref="member">save_llm_config</ref>(</highlight><highlight class="stringliteral">&quot;gpt-4&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;https://api.openai.com&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;test-key&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="251"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="252"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Assertions</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="253"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>result<sp/>==<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="254"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_json_dump.assert_called_once()</highlight></codeline>
+<codeline lineno="255"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>expected_config<sp/>=<sp/>{</highlight></codeline>
+<codeline lineno="256"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;llm&apos;</highlight><highlight class="normal">:<sp/>{</highlight></codeline>
+<codeline lineno="257"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;model&apos;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&apos;gpt-4&apos;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="258"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;api_base&apos;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&apos;https://api.openai.com&apos;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="259"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;api_key&apos;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&apos;test-key&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="260"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="261"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="262"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>mock_json_dump.call_args[0][0]<sp/>==<sp/>expected_config</highlight></codeline>
+<codeline lineno="263"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_print.assert_called_once()</highlight></codeline>
+<codeline lineno="264"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;configuration<sp/>saved&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>mock_print.call_args[0][0]</highlight></codeline>
+<codeline lineno="265"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="266"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.config_commands.get_penify_config&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="267"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;builtins.open&apos;,<sp/>side_effect=IOError(&quot;Permission<sp/>denied&quot;)</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="268"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;builtins.print&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="269" refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a73a264dfb21e16003e095b79f6eab2ac" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a73a264dfb21e16003e095b79f6eab2ac" kindref="member">test_save_llm_config_failure</ref>(self,<sp/>mock_print,<sp/>mock_file_open,<sp/>mock_get_config):</highlight></codeline>
+<codeline lineno="270"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>function<sp/>to<sp/>verify<sp/>that<sp/>the<sp/>save_llm_config<sp/>function<sp/>returns<sp/>False</highlight></codeline>
+<codeline lineno="271"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>prints<sp/>an<sp/>error<sp/>message<sp/>when<sp/>it<sp/>fails<sp/>to<sp/>save<sp/>the<sp/>LLM<sp/>configuration</highlight></codeline>
+<codeline lineno="272"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>due<sp/>to<sp/>a<sp/>permission<sp/>error.</highlight></codeline>
+<codeline lineno="273"><highlight class="normal"></highlight></codeline>
+<codeline lineno="274"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>It<sp/>sets<sp/>up<sp/>a<sp/>mock<sp/>configuration<sp/>file<sp/>that<sp/>exists<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>calls<sp/>the</highlight></codeline>
+<codeline lineno="275"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>save_llm_config<sp/>function<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>valid<sp/>parameters.<sp/>The<sp/>function<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>expected</highlight></codeline>
+<codeline lineno="276"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>to<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">print</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&quot;Error<sp/>saving<sp/>LLM<sp/>configuration:<sp/>Permission</highlight></codeline>
+<codeline lineno="277"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>denied&quot;<sp/>in<sp/>case<sp/>of<sp/>a<sp/>failure.</highlight></codeline>
+<codeline lineno="278"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="279"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="280"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self<sp/>(TestLLMConfig):<sp/>An<sp/>instance<sp/>of<sp/>the<sp/>test<sp/></highlight><highlight class="keyword">class</highlight><highlight class="normal">.</highlight></codeline>
+<codeline lineno="281"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_print<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/>representing<sp/>the<sp/></highlight><highlight class="keywordflow">print</highlight><highlight class="normal"><sp/>function,<sp/>which<sp/>will<sp/>be<sp/>used</highlight></codeline>
+<codeline lineno="282"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>to<sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>that<sp/>it<sp/>was<sp/>called<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>the<sp/>expected<sp/>error<sp/>message.</highlight></codeline>
+<codeline lineno="283"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_open<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/>representing<sp/>the<sp/>open<sp/>function,<sp/>which<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>used<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="284"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>this<sp/>test<sp/>but<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>included<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>a<sp/>parameter<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>completeness.</highlight></codeline>
+<codeline lineno="285"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_config<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/>representing<sp/>the<sp/>get_config<sp/>function,<sp/>which<sp/>will<sp/>be</highlight></codeline>
+<codeline lineno="286"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>used<sp/>to<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>the<sp/>mock<sp/>configuration<sp/>file.</highlight></codeline>
+<codeline lineno="287"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="288"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="289"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup<sp/>mock</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="290"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_config_file<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="291"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_config_file.exists.return_value<sp/>=<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="292"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_config.return_value<sp/>=<sp/>mock_config_file</highlight></codeline>
+<codeline lineno="293"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="294"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="295"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>=<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a4617bc5956e502c9555dc0dda0376df4" kindref="member">save_llm_config</ref>(</highlight><highlight class="stringliteral">&quot;gpt-4&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;https://api.openai.com&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;test-key&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="296"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="297"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Assert</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="298"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>result<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="299"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_print.assert_called_with(</highlight><highlight class="stringliteral">&quot;Error<sp/>saving<sp/>LLM<sp/>configuration:<sp/>Permission<sp/>denied&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="300"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="301"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.config_commands.Path&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="302"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;builtins.open&apos;,<sp/>new_callable=mock_open)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="303"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;json.dump&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="304"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;builtins.print&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="305" refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1af8d62310da2d768e21770f8f01ff5375" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1af8d62310da2d768e21770f8f01ff5375" kindref="member">test_save_jira_config_success</ref>(self,<sp/>mock_print,<sp/>mock_json_dump,<sp/>mock_file_open,<sp/>mock_path):</highlight></codeline>
+<codeline lineno="306"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>the<sp/>save_jira_config<sp/>function<sp/>to<sp/>ensure<sp/>it<sp/>saves<sp/>JIRA<sp/>configuration</highlight></codeline>
+<codeline lineno="307"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>successfully.</highlight></codeline>
+<codeline lineno="308"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="309"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>sets<sp/>up<sp/>mocks<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>various<sp/>dependencies<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>tests<sp/>the</highlight></codeline>
+<codeline lineno="310"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>functionality<sp/>of<sp/>saving<sp/>a<sp/>JIRA<sp/>configuration.<sp/>It<sp/>asserts<sp/>that<sp/>the</highlight></codeline>
+<codeline lineno="311"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>function<sp/>returns<sp/>`</highlight><highlight class="keyword">True</highlight><highlight class="normal">`,<sp/>the<sp/>JSON<sp/>dump<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>called<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>the<sp/>correct</highlight></codeline>
+<codeline lineno="312"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>configuration,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>the<sp/></highlight><highlight class="keywordflow">print</highlight><highlight class="normal"><sp/>statement<sp/>contains<sp/>the<sp/>expected<sp/>message.</highlight></codeline>
+<codeline lineno="313"><highlight class="normal"></highlight></codeline>
+<codeline lineno="314"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="315"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_print<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/></highlight><highlight class="keywordflow">print</highlight><highlight class="normal"><sp/>function.</highlight></codeline>
+<codeline lineno="316"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_json_dump<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>json.dump<sp/>function.</highlight></codeline>
+<codeline lineno="317"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_open<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>open<sp/>function.</highlight></codeline>
+<codeline lineno="318"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_path<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>path<sp/>module.</highlight></codeline>
+<codeline lineno="319"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="320"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="321"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup<sp/>mock</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="322"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_home_dir<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="323"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_path.home.return_value<sp/>=<sp/>mock_home_dir</highlight></codeline>
+<codeline lineno="324"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_home_dir.__truediv__.return_value<sp/>=<sp/>mock_home_dir</highlight></codeline>
+<codeline lineno="325"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_home_dir.exists.return_value<sp/>=<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="326"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="327"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Mock<sp/>json.load<sp/>to<sp/>return<sp/>empty<sp/>dict<sp/>when<sp/>reading</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="328"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>patch(</highlight><highlight class="stringliteral">&apos;json.load&apos;</highlight><highlight class="normal">,<sp/>return_value={}):</highlight></codeline>
+<codeline lineno="329"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="330"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>=<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1ab2486ac2bf16b4a671e49625bfa4f9b4" kindref="member">save_jira_config</ref>(</highlight><highlight class="stringliteral">&quot;https://jira.example.com&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;user&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;token&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="331"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="332"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Assertions</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="333"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>result<sp/>==<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="334"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_json_dump.assert_called_once()</highlight></codeline>
+<codeline lineno="335"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>expected_config<sp/>=<sp/>{</highlight></codeline>
+<codeline lineno="336"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;jira&apos;</highlight><highlight class="normal">:<sp/>{</highlight></codeline>
+<codeline lineno="337"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;url&apos;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&apos;https://jira.example.com&apos;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="338"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;username&apos;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&apos;user&apos;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="339"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;api_token&apos;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&apos;token&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="340"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="341"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="342"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>mock_json_dump.call_args[0][0]<sp/>==<sp/>expected_config</highlight></codeline>
+<codeline lineno="343"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_print.assert_called_once()</highlight></codeline>
+<codeline lineno="344"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;configuration<sp/>saved&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>mock_print.call_args[0][0]</highlight></codeline>
+<codeline lineno="345"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="346"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;os.getenv&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="347"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.config_commands.Path&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="348"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;builtins.open&apos;,<sp/>new_callable=mock_open,<sp/>read_data=&apos;{&quot;api_keys&quot;:<sp/>&quot;config-token&quot;}&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="349" refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a3355f7d313bebaa71694387cf2bc5232" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a3355f7d313bebaa71694387cf2bc5232" kindref="member">test_get_token_from_env</ref>(self,<sp/>mock_file_open,<sp/>mock_path,<sp/>mock_getenv):</highlight></codeline>
+<codeline lineno="350"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>retrieving<sp/>a<sp/>token<sp/>from<sp/>the<sp/>environment<sp/>variable.</highlight></codeline>
+<codeline lineno="351"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="352"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>tests<sp/>the<sp/>behavior<sp/>of<sp/>`get_token`<sp/>when<sp/>an<sp/>environment</highlight></codeline>
+<codeline lineno="353"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>variable<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>set.<sp/>It<sp/>verifies<sp/>that<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>the<sp/></highlight><highlight class="stringliteral">&apos;PENIFY_API_TOKEN&apos;</highlight><highlight class="normal"><sp/>environment</highlight></codeline>
+<codeline lineno="354"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>variable<sp/>exists,<sp/>the<sp/>function<sp/>returns<sp/>its<sp/>value<sp/>without<sp/>attempting<sp/>to</highlight></codeline>
+<codeline lineno="355"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>read<sp/>a<sp/>file.</highlight></codeline>
+<codeline lineno="356"><highlight class="normal"></highlight></codeline>
+<codeline lineno="357"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="358"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_open<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>simulating<sp/>file<sp/>operations.</highlight></codeline>
+<codeline lineno="359"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_path<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>simulating<sp/>path<sp/>operations.</highlight></codeline>
+<codeline lineno="360"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_getenv<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>simulating<sp/>environment<sp/>variable<sp/>retrieval.</highlight></codeline>
+<codeline lineno="361"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="362"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="363"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup<sp/>mock<sp/>for<sp/>env<sp/>var</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="364"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_getenv.return_value<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;env-token&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="365"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="366"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="367"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>=<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a5503d51c905e2f1b299b12d2a73bd812" kindref="member">get_token</ref>()</highlight></codeline>
+<codeline lineno="368"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="369"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Assertions</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="370"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>result<sp/>==<sp/></highlight><highlight class="stringliteral">&quot;env-token&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="371"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_getenv.assert_called_once_with(</highlight><highlight class="stringliteral">&apos;PENIFY_API_TOKEN&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="372"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>File<sp/>should<sp/>not<sp/>be<sp/>read<sp/>if<sp/>env<sp/>var<sp/>exists</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="373"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>mock_file_open.call_count<sp/>==<sp/>0</highlight></codeline>
+<codeline lineno="374"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="375"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;os.getenv&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="376"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.config_commands.Path&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="377"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;builtins.open&apos;,<sp/>new_callable=mock_open,<sp/>read_data=&apos;{&quot;api_keys&quot;:<sp/>&quot;config-token&quot;}&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="378" refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a6c0207be563c3de59a6d16277805114c" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a6c0207be563c3de59a6d16277805114c" kindref="member">test_get_token_from_config</ref>(self,<sp/>mock_file_open,<sp/>mock_path,<sp/>mock_getenv):</highlight></codeline>
+<codeline lineno="379"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>retrieving<sp/>a<sp/>token<sp/>from<sp/>the<sp/>configuration.</highlight></codeline>
+<codeline lineno="380"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="381"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>sets<sp/>up<sp/>mocks<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>environment<sp/>variables<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>configuration</highlight></codeline>
+<codeline lineno="382"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>files,<sp/>calls<sp/>the<sp/>`get_token`<sp/>function,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>asserts<sp/>its<sp/>behavior.<sp/>It</highlight></codeline>
+<codeline lineno="383"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>verifies<sp/>that<sp/>when<sp/>the<sp/>environment<sp/>variable<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>found,<sp/>the<sp/>function</highlight></codeline>
+<codeline lineno="384"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>reads<sp/>a<sp/>token<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>a<sp/>configuration<sp/>file<sp/>located<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the<sp/>user</highlight><highlight class="stringliteral">&apos;s<sp/>home</highlight></codeline>
+<codeline lineno="385"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>directory.</highlight></codeline>
+<codeline lineno="386"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="387"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="388"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_open<sp/>(MagicMock):<sp/>A<sp/>mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>`open`<sp/>function.</highlight></codeline>
+<codeline lineno="389"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_path<sp/>(MagicMock):<sp/>A<sp/>mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>`pathlib.Path`<sp/></highlight><highlight class="keyword">class</highlight><highlight class="normal">.</highlight></codeline>
+<codeline lineno="390"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_getenv<sp/>(MagicMock):<sp/>A<sp/>mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>`os.getenv`<sp/>function.</highlight></codeline>
+<codeline lineno="391"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="392"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="393"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup<sp/>mock<sp/>for<sp/>env<sp/>var<sp/>(not<sp/>found)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="394"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_getenv.return_value<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="395"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="396"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup<sp/>mock<sp/>for<sp/>config<sp/>file</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="397"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_home_dir<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="398"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_path.home.return_value<sp/>=<sp/>mock_home_dir</highlight></codeline>
+<codeline lineno="399"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_home_dir.__truediv__.return_value<sp/>=<sp/>mock_home_dir</highlight></codeline>
+<codeline lineno="400"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_home_dir.exists.return_value<sp/>=<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="401"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="402"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="403"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>=<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a5503d51c905e2f1b299b12d2a73bd812" kindref="member">get_token</ref>()</highlight></codeline>
+<codeline lineno="404"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="405"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Assertions</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="406"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>result<sp/>==<sp/></highlight><highlight class="stringliteral">&quot;config-token&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="407"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_getenv.assert_called_once_with(</highlight><highlight class="stringliteral">&apos;PENIFY_API_TOKEN&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="408"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_open.assert_called_once_with(mock_home_dir,<sp/></highlight><highlight class="stringliteral">&apos;r&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="409"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="410"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;os.getenv&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="411"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.config_commands.Path&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="412"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;builtins.open&apos;,<sp/>new_callable=mock_open,<sp/>read_data=&apos;{&quot;other_key&quot;:<sp/>&quot;value&quot;}&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="413" refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a400ca5d9fcdc159714e8df54920f9436" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a400ca5d9fcdc159714e8df54920f9436" kindref="member">test_get_token_not_found</ref>(self,<sp/>mock_file_open,<sp/>mock_path,<sp/>mock_getenv):</highlight></codeline>
+<codeline lineno="414"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>the<sp/>get_token<sp/>function<sp/>when<sp/>the<sp/>API<sp/>token<sp/>environment<sp/>variable<sp/>is</highlight></codeline>
+<codeline lineno="415"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>found.</highlight></codeline>
+<codeline lineno="416"><highlight class="normal"></highlight></codeline>
+<codeline lineno="417"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>tests<sp/>the<sp/>scenario<sp/>where<sp/>the<sp/>`PENIFY_API_TOKEN`</highlight></codeline>
+<codeline lineno="418"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>environment<sp/>variable<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>set.<sp/>It<sp/>mocks<sp/>the<sp/>environment<sp/>variable<sp/>to</highlight></codeline>
+<codeline lineno="419"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>`</highlight><highlight class="keywordtype">None</highlight><highlight class="normal">`,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>verifies<sp/>that<sp/>the<sp/>function<sp/>returns<sp/>`</highlight><highlight class="keywordtype">None</highlight><highlight class="normal">`.<sp/>The<sp/>test</highlight></codeline>
+<codeline lineno="420"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>also<sp/>checks<sp/>that<sp/>the<sp/>environment<sp/>variable<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>accessed<sp/>once<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>that<sp/>a</highlight></codeline>
+<codeline lineno="421"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>file<sp/>open<sp/>operation<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>attempted<sp/>on<sp/>a<sp/>configuration<sp/>file<sp/>located<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the</highlight></codeline>
+<codeline lineno="422"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>user</highlight><highlight class="stringliteral">&apos;s<sp/>home<sp/>directory.</highlight></codeline>
+<codeline lineno="423"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="424"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="425"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_open<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>built-</highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>`open`<sp/>function.</highlight></codeline>
+<codeline lineno="426"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_path<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>`pathlib.Path`<sp/>module.</highlight></codeline>
+<codeline lineno="427"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_getenv<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>`os.getenv`<sp/>function.</highlight></codeline>
+<codeline lineno="428"><highlight class="normal"></highlight></codeline>
+<codeline lineno="429"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="430"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">:<sp/>The<sp/>function<sp/>does<sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>anything;<sp/>it<sp/>asserts<sp/>conditions<sp/>to<sp/>verify</highlight></codeline>
+<codeline lineno="431"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>correctness.</highlight></codeline>
+<codeline lineno="432"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="433"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="434"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup<sp/>mock<sp/>for<sp/>env<sp/>var<sp/>(not<sp/>found)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="435"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_getenv.return_value<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="436"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="437"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup<sp/>mock<sp/>for<sp/>config<sp/>file</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="438"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_home_dir<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="439"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_path.home.return_value<sp/>=<sp/>mock_home_dir</highlight></codeline>
+<codeline lineno="440"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_home_dir.__truediv__.return_value<sp/>=<sp/>mock_home_dir</highlight></codeline>
+<codeline lineno="441"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_home_dir.exists.return_value<sp/>=<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="442"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="443"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="444"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>=<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a5503d51c905e2f1b299b12d2a73bd812" kindref="member">get_token</ref>()</highlight></codeline>
+<codeline lineno="445"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="446"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Assertions</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="447"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>result<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="448"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_getenv.assert_called_once_with(</highlight><highlight class="stringliteral">&apos;PENIFY_API_TOKEN&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="449"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_open.assert_called_once_with(mock_home_dir,<sp/></highlight><highlight class="stringliteral">&apos;r&apos;</highlight><highlight class="normal">)</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/test__doc__commands_8py.xml b/docs345/xml/test__doc__commands_8py.xml
new file mode 100644
index 0000000..46e88a8
--- /dev/null
+++ b/docs345/xml/test__doc__commands_8py.xml
@@ -0,0 +1,372 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="test__doc__commands_8py" kind="file" language="Python">
+    <compoundname>test_doc_commands.py</compoundname>
+    <innernamespace refid="namespacetests">tests</innernamespace>
+    <innernamespace refid="namespacetests_1_1test__doc__commands">tests::test_doc_commands</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacetests_1_1test__doc__commands" refkind="compound"><highlight class="keyword">import</highlight><highlight class="normal"><sp/>pytest</highlight></codeline>
+<codeline lineno="2"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>sys</highlight></codeline>
+<codeline lineno="3"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>os</highlight></codeline>
+<codeline lineno="4"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>argparse<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>ArgumentParser</highlight></codeline>
+<codeline lineno="5"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>unittest.mock<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>patch,<sp/>MagicMock</highlight></codeline>
+<codeline lineno="6"><highlight class="normal"></highlight></codeline>
+<codeline lineno="7"><highlight class="normal">sys.path.insert(0,<sp/>os.path.abspath(os.path.join(os.path.dirname(__file__),<sp/></highlight><highlight class="stringliteral">&apos;..&apos;</highlight><highlight class="normal">)))</highlight></codeline>
+<codeline lineno="8"><highlight class="normal"></highlight></codeline>
+<codeline lineno="9"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1commands_1_1doc__commands" kindref="compound">penify_hook.commands.doc_commands</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>(</highlight></codeline>
+<codeline lineno="10"><highlight class="normal"><sp/><sp/><sp/><sp/>generate_doc,</highlight></codeline>
+<codeline lineno="11"><highlight class="normal"><sp/><sp/><sp/><sp/>setup_docgen_parser,</highlight></codeline>
+<codeline lineno="12"><highlight class="normal"><sp/><sp/><sp/><sp/>handle_docgen</highlight></codeline>
+<codeline lineno="13"><highlight class="normal">)</highlight></codeline>
+<codeline lineno="14"><highlight class="normal"></highlight></codeline>
+<codeline lineno="15"><highlight class="normal"></highlight></codeline>
+<codeline lineno="16"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.file_analyzer.FileAnalyzerGenHook&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="17"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.git_analyzer.GitDocGenHook&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="18"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.folder_analyzer.FolderAnalyzerGenHook&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="19"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.api_client.APIClient&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="20"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.doc_commands.os.getcwd&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="21" refid="namespacetests_1_1test__doc__commands_1a806110833eb0aad547156faf014b31d8" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacetests_1_1test__doc__commands_1a806110833eb0aad547156faf014b31d8" kindref="member">test_generate_doc_no_location</ref>(mock_getcwd,<sp/>mock_api_client,<sp/></highlight></codeline>
+<codeline lineno="22"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_folder_analyzer,<sp/>mock_file_analyzer,<sp/></highlight></codeline>
+<codeline lineno="23"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_git_analyzer):</highlight></codeline>
+<codeline lineno="24"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>function<sp/>to<sp/>generate<sp/>documentation<sp/>without<sp/>location<sp/>information.</highlight></codeline>
+<codeline lineno="25"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="26"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>sets<sp/>up<sp/>mocks<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>API<sp/>client,<sp/>current<sp/>working</highlight></codeline>
+<codeline lineno="27"><highlight class="normal"><sp/><sp/><sp/><sp/>directory,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>Git<sp/>analyzer.<sp/>It<sp/>then<sp/>calls<sp/>the<sp/>`generate_doc`<sp/>function</highlight></codeline>
+<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>a<sp/>fake<sp/>API<sp/>URL<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>token.<sp/>The<sp/>function<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>expected<sp/>to<sp/>initialize</highlight></codeline>
+<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/>the<sp/>API<sp/>client,<sp/>configure<sp/>the<sp/>Git<sp/>analyzer,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>run<sp/>it<sp/>without<sp/>any</highlight></codeline>
+<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/>location<sp/>information.</highlight></codeline>
+<codeline lineno="31"><highlight class="normal"></highlight></codeline>
+<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_getcwd<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>os.getcwd().</highlight></codeline>
+<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_api_client<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>creating<sp/>an<sp/>API<sp/>client.</highlight></codeline>
+<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_folder_analyzer<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>folder<sp/>analysis.</highlight></codeline>
+<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_analyzer<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>file<sp/>analysis.</highlight></codeline>
+<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_git_analyzer<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>Git<sp/>analyzer<sp/>setup.</highlight></codeline>
+<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="39"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="40"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_api_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="42"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_api_client.return_value<sp/>=<sp/>mock_api_instance</highlight></codeline>
+<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_getcwd.return_value<sp/>=<sp/></highlight><highlight class="stringliteral">&apos;/fake/current/dir&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_git_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_git_analyzer.return_value<sp/>=<sp/>mock_git_instance</highlight></codeline>
+<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a4daac68bc563432bf25c85dc78081a25" kindref="member">generate_doc</ref>(</highlight><highlight class="stringliteral">&apos;http://api.example.com&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;fake-token&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Assertions</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_api_client.assert_called_once_with(</highlight><highlight class="stringliteral">&apos;http://api.example.com&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;fake-token&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_git_analyzer.assert_called_once_with(</highlight><highlight class="stringliteral">&apos;/fake/current/dir&apos;</highlight><highlight class="normal">,<sp/>mock_api_instance)</highlight></codeline>
+<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_git_instance.run.assert_called_once()</highlight></codeline>
+<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>mock_file_analyzer.assert_not_called()</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>mock_folder_analyzer.assert_not_called()</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="56"><highlight class="normal"></highlight></codeline>
+<codeline lineno="57"><highlight class="normal"></highlight></codeline>
+<codeline lineno="58"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.git_analyzer.GitDocGenHook&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="59"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.folder_analyzer.FolderAnalyzerGenHook&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="60"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.api_client.APIClient&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="61"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.api_client.APIClient&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="62" refid="namespacetests_1_1test__doc__commands_1a0e74c920f258f442914771164fe26b45" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacetests_1_1test__doc__commands_1a0e74c920f258f442914771164fe26b45" kindref="member">test_generate_doc_file_location</ref>(mock_api_client,<sp/>mock_folder_analyzer,<sp/></highlight></codeline>
+<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_analyzer,<sp/>mock_git_analyzer):</highlight></codeline>
+<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>generating<sp/>a<sp/>documentation<sp/>file<sp/>location.</highlight></codeline>
+<codeline lineno="65"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="66"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>tests<sp/>the<sp/>process<sp/>of<sp/>generating<sp/>a<sp/>documentation<sp/>file</highlight></codeline>
+<codeline lineno="67"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>location<sp/>using<sp/>mock<sp/>objects<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>API<sp/>client,<sp/>folder<sp/>analyzer,<sp/>file</highlight></codeline>
+<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/>analyzer,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>Git<sp/>analyzer.<sp/>It<sp/>sets<sp/>up<sp/>the<sp/>necessary<sp/>mocks,<sp/>calls<sp/>the</highlight></codeline>
+<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/>`generate_doc`<sp/>function<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>specified<sp/>parameters,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>asserts<sp/>that<sp/>the</highlight></codeline>
+<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/>appropriate<sp/>methods<sp/>on<sp/>the<sp/>mock<sp/>objects<sp/>are<sp/>called<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>expected.</highlight></codeline>
+<codeline lineno="71"><highlight class="normal"></highlight></codeline>
+<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="73"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_api_client<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>API<sp/>client.</highlight></codeline>
+<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_folder_analyzer<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>folder<sp/>analyzer.</highlight></codeline>
+<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_analyzer<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>file<sp/>analyzer.</highlight></codeline>
+<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_git_analyzer<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>Git<sp/>analyzer.</highlight></codeline>
+<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="78"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="79"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_api_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_api_client.return_value<sp/>=<sp/>mock_api_instance</highlight></codeline>
+<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_file_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_file_analyzer.return_value<sp/>=<sp/>mock_file_instance</highlight></codeline>
+<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="85"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="86"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a4daac68bc563432bf25c85dc78081a25" kindref="member">generate_doc</ref>(</highlight><highlight class="stringliteral">&apos;http://api.example.com&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;fake-token&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;example.py&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Assertions</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_api_client.assert_called_once_with(</highlight><highlight class="stringliteral">&apos;http://api.example.com&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;fake-token&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="90"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_file_analyzer.assert_called_once_with(</highlight><highlight class="stringliteral">&apos;example.py&apos;</highlight><highlight class="normal">,<sp/>mock_api_instance)</highlight></codeline>
+<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_file_instance.run.assert_called_once()</highlight></codeline>
+<codeline lineno="92"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_git_analyzer.assert_not_called()</highlight></codeline>
+<codeline lineno="93"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_folder_analyzer.assert_not_called()</highlight></codeline>
+<codeline lineno="94"><highlight class="normal"></highlight></codeline>
+<codeline lineno="95"><highlight class="normal"></highlight></codeline>
+<codeline lineno="96"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.doc_commands.GitDocGenHook&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="97"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.doc_commands.FileAnalyzerGenHook&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="98"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.doc_commands.FolderAnalyzerGenHook&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="99"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.api_client.APIClient&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="100" refid="namespacetests_1_1test__doc__commands_1a4bb75610e40d94d42bc169b25403c186" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacetests_1_1test__doc__commands_1a4bb75610e40d94d42bc169b25403c186" kindref="member">test_generate_doc_folder_location</ref>(mock_api_client,<sp/>mock_folder_analyzer,<sp/></highlight></codeline>
+<codeline lineno="101"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_analyzer,<sp/>mock_git_analyzer):</highlight></codeline>
+<codeline lineno="102"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>the<sp/>function<sp/>to<sp/>generate<sp/>documentation<sp/>for<sp/>a<sp/>folder<sp/>location.</highlight></codeline>
+<codeline lineno="103"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="104"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>It<sp/>sets<sp/>up<sp/>mock<sp/>objects<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>API<sp/>client,<sp/>folder<sp/>analyzer,<sp/>file<sp/>analyzer,</highlight></codeline>
+<codeline lineno="105"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>Git<sp/>analyzer,<sp/>then<sp/>calls<sp/>the<sp/>`generate_doc`<sp/>function<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>specified</highlight></codeline>
+<codeline lineno="106"><highlight class="normal"><sp/><sp/><sp/><sp/>parameters.<sp/>Finally,<sp/>it<sp/>asserts<sp/>that<sp/>the<sp/>correct<sp/>methods<sp/>on<sp/>the<sp/>mock</highlight></codeline>
+<codeline lineno="107"><highlight class="normal"><sp/><sp/><sp/><sp/>objects<sp/>were<sp/>called<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>expected.</highlight></codeline>
+<codeline lineno="108"><highlight class="normal"></highlight></codeline>
+<codeline lineno="109"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="110"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_api_client<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>API<sp/>client.</highlight></codeline>
+<codeline lineno="111"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_folder_analyzer<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>folder<sp/>analyzer.</highlight></codeline>
+<codeline lineno="112"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_analyzer<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>file<sp/>analyzer.</highlight></codeline>
+<codeline lineno="113"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_git_analyzer<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>Git<sp/>analyzer.</highlight></codeline>
+<codeline lineno="114"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="115"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="116"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="117"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_api_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="118"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_api_client.return_value<sp/>=<sp/>mock_api_instance</highlight></codeline>
+<codeline lineno="119"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_folder_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="120"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_folder_analyzer.return_value<sp/>=<sp/>mock_folder_instance</highlight></codeline>
+<codeline lineno="121"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="122"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="123"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a4daac68bc563432bf25c85dc78081a25" kindref="member">generate_doc</ref>(</highlight><highlight class="stringliteral">&apos;http://api.example.com&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;fake-token&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;src&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="124"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="125"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Assertions</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="126"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_api_client.assert_called_once_with(</highlight><highlight class="stringliteral">&apos;http://api.example.com&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;fake-token&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="127"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_folder_analyzer.assert_called_once_with(</highlight><highlight class="stringliteral">&apos;src&apos;</highlight><highlight class="normal">,<sp/>mock_api_instance)</highlight></codeline>
+<codeline lineno="128"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_folder_instance.run.assert_called_once()</highlight></codeline>
+<codeline lineno="129"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_git_analyzer.assert_not_called()</highlight></codeline>
+<codeline lineno="130"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_file_analyzer.assert_not_called()</highlight></codeline>
+<codeline lineno="131"><highlight class="normal"></highlight></codeline>
+<codeline lineno="132"><highlight class="normal"></highlight></codeline>
+<codeline lineno="133"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;sys.exit&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="134"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.doc_commands.GitDocGenHook&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="135"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.api_client.APIClient&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="136" refid="namespacetests_1_1test__doc__commands_1aec76cc25c23476794234cdadbcaef0c0" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacetests_1_1test__doc__commands_1aec76cc25c23476794234cdadbcaef0c0" kindref="member">test_generate_doc_error_handling</ref>(mock_api_client,<sp/>mock_git_analyzer,<sp/>mock_exit):</highlight></codeline>
+<codeline lineno="137"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Generate<sp/>a<sp/>documentation<sp/>string<sp/>for<sp/>the<sp/>provided<sp/>code<sp/>snippet<sp/>using</highlight></codeline>
+<codeline lineno="138"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>Google<sp/>Docstring<sp/>style.</highlight></codeline>
+<codeline lineno="139"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="140"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>Short<sp/>one<sp/>line<sp/>description:<sp/>Test<sp/>function<sp/>to<sp/>ensure<sp/>proper<sp/>error</highlight></codeline>
+<codeline lineno="141"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>handling<sp/>during<sp/>API<sp/>calls<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>GitAnalyzer.<sp/><sp/>Multiline<sp/>long<sp/>description:</highlight></codeline>
+<codeline lineno="142"><highlight class="normal"><sp/><sp/><sp/><sp/>This<sp/>test<sp/>function<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>designed<sp/>to<sp/>verify<sp/>that<sp/>the<sp/>generate_doc<sp/>function</highlight></codeline>
+<codeline lineno="143"><highlight class="normal"><sp/><sp/><sp/><sp/>handles<sp/>exceptions<sp/>correctly<sp/>when<sp/>an<sp/>error<sp/>occurs<sp/>during<sp/>API<sp/>interaction</highlight></codeline>
+<codeline lineno="144"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>GitAnalyzer.<sp/>It<sp/>sets<sp/>up<sp/>a<sp/>mock<sp/>API<sp/>client<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>a<sp/>mock<sp/>Git<sp/>analyzer,</highlight></codeline>
+<codeline lineno="145"><highlight class="normal"><sp/><sp/><sp/><sp/>causing<sp/>the<sp/>analyzer<sp/>to<sp/></highlight><highlight class="keywordflow">raise</highlight><highlight class="normal"><sp/>an<sp/>exception<sp/>to<sp/>simulate<sp/>a<sp/>failure</highlight></codeline>
+<codeline lineno="146"><highlight class="normal"><sp/><sp/><sp/><sp/>condition.<sp/>The<sp/>function<sp/>then<sp/>asserts<sp/>that<sp/>the<sp/>exit<sp/>code<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>set<sp/>to<sp/>1<sp/>when</highlight></codeline>
+<codeline lineno="147"><highlight class="normal"><sp/><sp/><sp/><sp/>the<sp/>error<sp/>handling<sp/>mechanism<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>invoked.</highlight></codeline>
+<codeline lineno="148"><highlight class="normal"></highlight></codeline>
+<codeline lineno="149"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="150"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_api_client<sp/>(MagicMock):<sp/>A<sp/>mock<sp/>object<sp/>simulating<sp/>the<sp/>API<sp/>client.</highlight></codeline>
+<codeline lineno="151"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_git_analyzer<sp/>(MagicMock):<sp/>A<sp/>mock<sp/>object<sp/>simulating<sp/>the<sp/>Git<sp/>analyzer,<sp/>configured<sp/>to<sp/></highlight><highlight class="keywordflow">raise</highlight><highlight class="normal"><sp/>an</highlight></codeline>
+<codeline lineno="152"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>exception.</highlight></codeline>
+<codeline lineno="153"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_exit<sp/>(MagicMock):<sp/>A<sp/>mock<sp/>object<sp/>representing<sp/>the<sp/>exit<sp/>function,<sp/>which<sp/>should<sp/>be<sp/>called</highlight></codeline>
+<codeline lineno="154"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>an<sp/>error<sp/>code.</highlight></codeline>
+<codeline lineno="155"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="156"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="157"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="158"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_api_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="159"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_api_client.return_value<sp/>=<sp/>mock_api_instance</highlight></codeline>
+<codeline lineno="160"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_git_analyzer.side_effect<sp/>=<sp/><ref refid="classException" kindref="compound">Exception</ref>(</highlight><highlight class="stringliteral">&quot;Test<sp/>error&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="161"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="162"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="163"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a4daac68bc563432bf25c85dc78081a25" kindref="member">generate_doc</ref>(</highlight><highlight class="stringliteral">&apos;http://api.example.com&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;fake-token&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="164"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="165"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Assertions</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="166"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_exit.assert_called_once_with(1)</highlight></codeline>
+<codeline lineno="167"><highlight class="normal"></highlight></codeline>
+<codeline lineno="168"><highlight class="normal"></highlight></codeline>
+<codeline lineno="169" refid="namespacetests_1_1test__doc__commands_1a0f27751d0ba2acfe40ef7e85bccf47d7" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacetests_1_1test__doc__commands_1a0f27751d0ba2acfe40ef7e85bccf47d7" kindref="member">test_setup_docgen_parser</ref>():</highlight></codeline>
+<codeline lineno="170"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>the<sp/>setup_docgen_parser<sp/>function<sp/>to<sp/>ensure<sp/>it<sp/>properly<sp/>configures</highlight></codeline>
+<codeline lineno="171"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>the<sp/>ArgumentParser<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>docgen<sp/>options.</highlight></codeline>
+<codeline lineno="172"><highlight class="normal"></highlight></codeline>
+<codeline lineno="173"><highlight class="normal"><sp/><sp/><sp/><sp/>It<sp/>verifies<sp/>that<sp/>the<sp/>parser<sp/>correctly<sp/>sets<sp/>up<sp/>docgen<sp/>options<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>handles</highlight></codeline>
+<codeline lineno="174"><highlight class="normal"><sp/><sp/><sp/><sp/>different<sp/>subcommands<sp/>like<sp/></highlight><highlight class="stringliteral">&apos;install-hook&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;uninstall-hook&apos;</highlight><highlight class="normal">.</highlight></codeline>
+<codeline lineno="175"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="176"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="177"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>parser<sp/>=<sp/>ArgumentParser()</highlight></codeline>
+<codeline lineno="178"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1doc__commands_1acc7f4ead1b11951d885fa5c151c2cbe0" kindref="member">setup_docgen_parser</ref>(parser)</highlight></codeline>
+<codeline lineno="179"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="180"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Check<sp/>that<sp/>docgen<sp/>options<sp/>are<sp/>properly<sp/>set<sp/>up</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="181"><highlight class="normal"><sp/><sp/><sp/><sp/>args<sp/>=<sp/>parser.parse_args([</highlight><highlight class="stringliteral">&apos;-l&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;test_location&apos;</highlight><highlight class="normal">])</highlight></codeline>
+<codeline lineno="182"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>args.location<sp/>==<sp/></highlight><highlight class="stringliteral">&apos;test_location&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="183"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="184"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Check<sp/>install-hook<sp/>subcommand</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="185"><highlight class="normal"><sp/><sp/><sp/><sp/>args<sp/>=<sp/>parser.parse_args([</highlight><highlight class="stringliteral">&apos;install-hook&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;-l&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;hook_location&apos;</highlight><highlight class="normal">])</highlight></codeline>
+<codeline lineno="186"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>args.docgen_subcommand<sp/>==<sp/></highlight><highlight class="stringliteral">&apos;install-hook&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="187"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>args.location<sp/>==<sp/></highlight><highlight class="stringliteral">&apos;hook_location&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="188"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="189"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Check<sp/>uninstall-hook<sp/>subcommand</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="190"><highlight class="normal"><sp/><sp/><sp/><sp/>args<sp/>=<sp/>parser.parse_args([</highlight><highlight class="stringliteral">&apos;uninstall-hook&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;-l&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;hook_location&apos;</highlight><highlight class="normal">])</highlight></codeline>
+<codeline lineno="191"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>args.docgen_subcommand<sp/>==<sp/></highlight><highlight class="stringliteral">&apos;uninstall-hook&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="192"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>args.location<sp/>==<sp/></highlight><highlight class="stringliteral">&apos;hook_location&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="193"><highlight class="normal"></highlight></codeline>
+<codeline lineno="194"><highlight class="normal"></highlight></codeline>
+<codeline lineno="195"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.doc_commands.install_git_hook&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="196"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.doc_commands.uninstall_git_hook&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="197"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.doc_commands.generate_doc&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="198"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.doc_commands.get_token&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="199"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;sys.exit&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="200" refid="namespacetests_1_1test__doc__commands_1ab74688baa8c9b5ba302c2877a9789d05" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacetests_1_1test__doc__commands_1ab74688baa8c9b5ba302c2877a9789d05" kindref="member">test_handle_docgen_install_hook</ref>(mock_exit,<sp/>mock_get_token,<sp/>mock_generate_doc,<sp/></highlight></codeline>
+<codeline lineno="201"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_uninstall_hook,<sp/>mock_install_hook):</highlight></codeline>
+<codeline lineno="202"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>the<sp/>handling<sp/>of<sp/>the<sp/>&apos;install-hook&apos;<sp/>subcommand.</highlight></codeline>
+<codeline lineno="203"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="204"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>sets<sp/>up<sp/>a<sp/>mock<sp/>environment<sp/>where<sp/>it<sp/>simulates<sp/>the</highlight></codeline>
+<codeline lineno="205"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>execution<sp/>of<sp/>the<sp/>&apos;install-hook&apos;</highlight><highlight class="normal"><sp/>subcommand.<sp/>It<sp/>verifies<sp/>that<sp/>the</highlight></codeline>
+<codeline lineno="206"><highlight class="normal"><sp/><sp/><sp/><sp/>`mock_install_hook`<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>called<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>the<sp/>correct<sp/>arguments,<sp/></highlight><highlight class="keywordflow">while</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="207"><highlight class="normal"><sp/><sp/><sp/><sp/>`mock_generate_doc`<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>`mock_uninstall_hook`<sp/>are<sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>called.</highlight></codeline>
+<codeline lineno="208"><highlight class="normal"></highlight></codeline>
+<codeline lineno="209"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="210"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_exit<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>sys.exit.</highlight></codeline>
+<codeline lineno="211"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_token<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/>to<sp/>simulate<sp/>fetching<sp/>a<sp/>token.</highlight></codeline>
+<codeline lineno="212"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_generate_doc<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/>to<sp/>simulate<sp/>generating<sp/>documentation.</highlight></codeline>
+<codeline lineno="213"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_uninstall_hook<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/>to<sp/>simulate<sp/>uninstalling<sp/>a<sp/>hook.</highlight></codeline>
+<codeline lineno="214"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_install_hook<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/>to<sp/>simulate<sp/>installing<sp/>a<sp/>hook.</highlight></codeline>
+<codeline lineno="215"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="216"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="217"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="218"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_get_token.return_value<sp/>=<sp/></highlight><highlight class="stringliteral">&apos;fake-token&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="219"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="220"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Test<sp/>install-hook<sp/>subcommand</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="221"><highlight class="normal"><sp/><sp/><sp/><sp/>args<sp/>=<sp/>MagicMock(docgen_subcommand=</highlight><highlight class="stringliteral">&apos;install-hook&apos;</highlight><highlight class="normal">,<sp/>location=</highlight><highlight class="stringliteral">&apos;hook_location&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="222"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a2006ab13bff718ef783868a910c0b704" kindref="member">handle_docgen</ref>(args)</highlight></codeline>
+<codeline lineno="223"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_install_hook.assert_called_once_with(</highlight><highlight class="stringliteral">&apos;hook_location&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;fake-token&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="224"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_generate_doc.assert_not_called()</highlight></codeline>
+<codeline lineno="225"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_uninstall_hook.assert_not_called()</highlight></codeline>
+<codeline lineno="226"><highlight class="normal"></highlight></codeline>
+<codeline lineno="227"><highlight class="normal"></highlight></codeline>
+<codeline lineno="228"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.doc_commands.install_git_hook&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="229"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.doc_commands.uninstall_git_hook&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="230"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.doc_commands.generate_doc&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="231"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.doc_commands.get_token&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="232"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;sys.exit&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="233" refid="namespacetests_1_1test__doc__commands_1a1458af9ad0128c3ca1263b552fd5e482" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacetests_1_1test__doc__commands_1a1458af9ad0128c3ca1263b552fd5e482" kindref="member">test_handle_docgen_uninstall_hook</ref>(mock_exit,<sp/>mock_get_token,<sp/>mock_generate_doc,<sp/></highlight></codeline>
+<codeline lineno="234"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_uninstall_hook,<sp/>mock_install_hook):</highlight></codeline>
+<codeline lineno="235"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>the<sp/>uninstall-hook<sp/>subcommand<sp/>of<sp/>the<sp/>handle_docgen<sp/>function.</highlight></codeline>
+<codeline lineno="236"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>test<sp/>case<sp/>sets<sp/>up<sp/>a<sp/>mock<sp/>environment<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>verifies<sp/>that<sp/>the</highlight></codeline>
+<codeline lineno="237"><highlight class="normal"><sp/><sp/><sp/><sp/>uninstall-hook<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>called<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>the<sp/>correct<sp/>location,<sp/></highlight><highlight class="keywordflow">while</highlight><highlight class="normal"><sp/>generate_doc</highlight></codeline>
+<codeline lineno="238"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>install_hook<sp/>are<sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>called.</highlight></codeline>
+<codeline lineno="239"><highlight class="normal"></highlight></codeline>
+<codeline lineno="240"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="241"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_exit<sp/>(MagicMock):<sp/>A<sp/>mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>exit<sp/>function.</highlight></codeline>
+<codeline lineno="242"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_token<sp/>(MagicMock):<sp/>A<sp/>mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>get_token<sp/>function.</highlight></codeline>
+<codeline lineno="243"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_generate_doc<sp/>(MagicMock):<sp/>A<sp/>mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>generate_doc<sp/>function.</highlight></codeline>
+<codeline lineno="244"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_uninstall_hook<sp/>(MagicMock):<sp/>A<sp/>mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>uninstall_hook<sp/>function.</highlight></codeline>
+<codeline lineno="245"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_install_hook<sp/>(MagicMock):<sp/>A<sp/>mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>install_hook<sp/>function.</highlight></codeline>
+<codeline lineno="246"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="247"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="248"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="249"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_get_token.return_value<sp/>=<sp/></highlight><highlight class="stringliteral">&apos;fake-token&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="250"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="251"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Test<sp/>uninstall-hook<sp/>subcommand</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="252"><highlight class="normal"><sp/><sp/><sp/><sp/>args<sp/>=<sp/>MagicMock(docgen_subcommand=</highlight><highlight class="stringliteral">&apos;uninstall-hook&apos;</highlight><highlight class="normal">,<sp/>location=</highlight><highlight class="stringliteral">&apos;hook_location&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="253"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a2006ab13bff718ef783868a910c0b704" kindref="member">handle_docgen</ref>(args)</highlight></codeline>
+<codeline lineno="254"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_uninstall_hook.assert_called_once_with(</highlight><highlight class="stringliteral">&apos;hook_location&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="255"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_generate_doc.assert_not_called()</highlight></codeline>
+<codeline lineno="256"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_install_hook.assert_not_called()</highlight></codeline>
+<codeline lineno="257"><highlight class="normal"></highlight></codeline>
+<codeline lineno="258"><highlight class="normal"></highlight></codeline>
+<codeline lineno="259"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.doc_commands.install_git_hook&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="260"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.doc_commands.uninstall_git_hook&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="261"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.doc_commands.generate_doc&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="262"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.doc_commands.get_token&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="263" refid="namespacetests_1_1test__doc__commands_1ab158ffa48469b6c097a7a55fcb20c21a" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacetests_1_1test__doc__commands_1ab158ffa48469b6c097a7a55fcb20c21a" kindref="member">test_handle_docgen_generate</ref>(mock_get_token,<sp/>mock_generate_doc,<sp/></highlight></codeline>
+<codeline lineno="264"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_uninstall_hook,<sp/>mock_install_hook):</highlight></codeline>
+<codeline lineno="265"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>the<sp/>direct<sp/>documentation<sp/>generation<sp/>functionality.</highlight></codeline>
+<codeline lineno="266"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="267"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>tests<sp/>the<sp/>`handle_docgen`<sp/>function<sp/>when<sp/>no<sp/>subcommand<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="268"><highlight class="normal"><sp/><sp/><sp/><sp/>provided.<sp/>It<sp/>verifies<sp/>that<sp/>the<sp/>document<sp/>generation<sp/>hook<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>called<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="269"><highlight class="normal"><sp/><sp/><sp/><sp/>the<sp/>uninstall<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>install<sp/>hooks<sp/>are<sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>called.</highlight></codeline>
+<codeline lineno="270"><highlight class="normal"></highlight></codeline>
+<codeline lineno="271"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="272"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_token<sp/>(MagicMock):<sp/>Mocked<sp/>function<sp/>to<sp/>get<sp/>authentication<sp/>token.</highlight></codeline>
+<codeline lineno="273"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_generate_doc<sp/>(MagicMock):<sp/>Mocked<sp/>function<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>generating<sp/>documentation.</highlight></codeline>
+<codeline lineno="274"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_uninstall_hook<sp/>(MagicMock):<sp/>Mocked<sp/>function<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>uninstalling<sp/>the<sp/>document<sp/>generation<sp/>hook.</highlight></codeline>
+<codeline lineno="275"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_install_hook<sp/>(MagicMock):<sp/>Mocked<sp/>function<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>installing<sp/>the<sp/>document<sp/>generation<sp/>hook.</highlight></codeline>
+<codeline lineno="276"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="277"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="278"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="279"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_get_token.return_value<sp/>=<sp/></highlight><highlight class="stringliteral">&apos;fake-token&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="280"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="281"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Test<sp/>direct<sp/>documentation<sp/>generation</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="282"><highlight class="normal"><sp/><sp/><sp/><sp/>args<sp/>=<sp/>MagicMock(docgen_subcommand=</highlight><highlight class="keywordtype">None</highlight><highlight class="normal">,<sp/>location=</highlight><highlight class="stringliteral">&apos;doc_location&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="283"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a2006ab13bff718ef783868a910c0b704" kindref="member">handle_docgen</ref>(args)</highlight></codeline>
+<codeline lineno="284"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_generate_doc.assert_called_once()</highlight></codeline>
+<codeline lineno="285"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_install_hook.assert_not_called()</highlight></codeline>
+<codeline lineno="286"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_uninstall_hook.assert_not_called()</highlight></codeline>
+<codeline lineno="287"><highlight class="normal"></highlight></codeline>
+<codeline lineno="288"><highlight class="normal"></highlight></codeline>
+<codeline lineno="289"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.doc_commands.get_token&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="290"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;sys.exit&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="291" refid="namespacetests_1_1test__doc__commands_1af9b01e5fc89255cac96747fa081c442c" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacetests_1_1test__doc__commands_1af9b01e5fc89255cac96747fa081c442c" kindref="member">test_handle_docgen_no_token</ref>(mock_exit,<sp/>mock_get_token):</highlight></codeline>
+<codeline lineno="292"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>the<sp/>behavior<sp/>of<sp/>the<sp/>`handle_docgen`<sp/>function<sp/>when<sp/>no<sp/>token<sp/>is</highlight></codeline>
+<codeline lineno="293"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>provided.</highlight></codeline>
+<codeline lineno="294"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="295"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>asserts<sp/>that<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>no<sp/>token<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>returned<sp/>by<sp/>`mock_get_token`,</highlight></codeline>
+<codeline lineno="296"><highlight class="normal"><sp/><sp/><sp/><sp/>the<sp/>`handle_docgen`<sp/>function<sp/>will<sp/>call<sp/>`mock_exit`<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>a<sp/>status<sp/>code<sp/>of</highlight></codeline>
+<codeline lineno="297"><highlight class="normal"><sp/><sp/><sp/><sp/>1.</highlight></codeline>
+<codeline lineno="298"><highlight class="normal"></highlight></codeline>
+<codeline lineno="299"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="300"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_exit<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/>simulating<sp/>the<sp/>`exit`<sp/>function.</highlight></codeline>
+<codeline lineno="301"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_token<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/>simulating<sp/>the<sp/>`get_token`<sp/>function.</highlight></codeline>
+<codeline lineno="302"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="303"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="304"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Test<sp/>with<sp/>no<sp/>token</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="305"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_get_token.return_value<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="306"><highlight class="normal"><sp/><sp/><sp/><sp/>args<sp/>=<sp/>MagicMock(docgen_subcommand=</highlight><highlight class="keywordtype">None</highlight><highlight class="normal">,<sp/>location=</highlight><highlight class="stringliteral">&apos;doc_location&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="307"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a2006ab13bff718ef783868a910c0b704" kindref="member">handle_docgen</ref>(args)</highlight></codeline>
+<codeline lineno="308"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_exit.assert_called_once_with(1)</highlight></codeline>
+<codeline lineno="309"><highlight class="normal"></highlight></codeline>
+<codeline lineno="310"><highlight class="normal"></highlight></codeline>
+<codeline lineno="311"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.doc_commands.os.getcwd&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="312"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.api_client.APIClient&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="313" refid="namespacetests_1_1test__doc__commands_1a335e7fd4912192c7276cf31bbebc6eb0" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacetests_1_1test__doc__commands_1a335e7fd4912192c7276cf31bbebc6eb0" kindref="member">test_generate_doc_with_file_exception</ref>(mock_api_client,<sp/>mock_getcwd):</highlight></codeline>
+<codeline lineno="314"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Generate<sp/>documentation<sp/>from<sp/>a<sp/>Python<sp/>source<sp/>file.</highlight></codeline>
+<codeline lineno="315"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="316"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>reads<sp/>a<sp/>Python<sp/>file<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>generates<sp/>a<sp/>docstring<sp/>based<sp/>on<sp/>its</highlight></codeline>
+<codeline lineno="317"><highlight class="normal"><sp/><sp/><sp/><sp/>content.<sp/>It<sp/>uses<sp/>mock<sp/>objects<sp/>to<sp/>simulate<sp/>API<sp/>calls<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>directory</highlight></codeline>
+<codeline lineno="318"><highlight class="normal"><sp/><sp/><sp/><sp/>operations<sp/>during<sp/>testing.</highlight></codeline>
+<codeline lineno="319"><highlight class="normal"></highlight></codeline>
+<codeline lineno="320"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="321"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_api_client<sp/>(unittest.mock.MagicMock):<sp/>A<sp/>mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>simulating<sp/>API<sp/>client<sp/>behavior.</highlight></codeline>
+<codeline lineno="322"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_getcwd<sp/>(unittest.mock.MagicMock):<sp/>A<sp/>mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>simulating<sp/>the<sp/>current<sp/>working<sp/>directory<sp/>function.</highlight></codeline>
+<codeline lineno="323"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="324"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="325"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="326"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_api_client.side_effect<sp/>=<sp/><ref refid="classException" kindref="compound">Exception</ref>(</highlight><highlight class="stringliteral">&quot;API<sp/>error&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="327"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_getcwd.return_value<sp/>=<sp/></highlight><highlight class="stringliteral">&apos;/fake/current/dir&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="328"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="329"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Test<sp/>file<sp/>location<sp/>with<sp/>exception</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="330"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>pytest.raises(SystemExit):</highlight></codeline>
+<codeline lineno="331"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a4daac68bc563432bf25c85dc78081a25" kindref="member">generate_doc</ref>(</highlight><highlight class="stringliteral">&apos;http://api.example.com&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;fake-token&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;example.py&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="332"><highlight class="normal"></highlight></codeline>
+<codeline lineno="333"><highlight class="normal"></highlight></codeline>
+<codeline lineno="334"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.doc_commands.os.getcwd&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="335"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.api_client.APIClient&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="336" refid="namespacetests_1_1test__doc__commands_1a64165ddfdb3071a88422f080f0e529a3" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacetests_1_1test__doc__commands_1a64165ddfdb3071a88422f080f0e529a3" kindref="member">test_generate_doc_with_folder_exception</ref>(mock_api_client,<sp/>mock_getcwd):</highlight></codeline>
+<codeline lineno="337"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Generate<sp/>documentation<sp/>from<sp/>a<sp/>given<sp/>API<sp/>endpoint<sp/>and<sp/>save<sp/>it<sp/>to<sp/>a</highlight></codeline>
+<codeline lineno="338"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>folder.</highlight></codeline>
+<codeline lineno="339"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="340"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>fetches<sp/>data<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>the<sp/>specified<sp/>API<sp/>endpoint,<sp/>processes</highlight></codeline>
+<codeline lineno="341"><highlight class="normal"><sp/><sp/><sp/><sp/>it,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>saves<sp/>the<sp/>generated<sp/>documentation<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the<sp/>provided<sp/>folder.<sp/>If<sp/>an</highlight></codeline>
+<codeline lineno="342"><highlight class="normal"><sp/><sp/><sp/><sp/>error<sp/>occurs<sp/>during<sp/>the<sp/>fetching<sp/>process,<sp/>a<sp/>SystemExit<sp/>exception<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="343"><highlight class="normal"><sp/><sp/><sp/><sp/>raised<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>an<sp/>appropriate<sp/>message.</highlight></codeline>
+<codeline lineno="344"><highlight class="normal"></highlight></codeline>
+<codeline lineno="345"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="346"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_url<sp/>(str):<sp/>The<sp/>URL<sp/>of<sp/>the<sp/>API<sp/>endpoint<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>which<sp/>data<sp/>will<sp/>be<sp/>fetched.</highlight></codeline>
+<codeline lineno="347"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>token<sp/>(str):<sp/>The<sp/>authentication<sp/>token<sp/>required<sp/>to<sp/>access<sp/>the<sp/>API.</highlight></codeline>
+<codeline lineno="348"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>folder_path<sp/>(str):<sp/>The<sp/>path<sp/>to<sp/>the<sp/>folder<sp/>where<sp/>the<sp/>documentation<sp/>will<sp/>be<sp/>saved.</highlight></codeline>
+<codeline lineno="349"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="350"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="351"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="352"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_api_client.side_effect<sp/>=<sp/><ref refid="classException" kindref="compound">Exception</ref>(</highlight><highlight class="stringliteral">&quot;API<sp/>error&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="353"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_getcwd.return_value<sp/>=<sp/></highlight><highlight class="stringliteral">&apos;/fake/current/dir&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="354"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="355"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Test<sp/>folder<sp/>location<sp/>with<sp/>exception</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="356"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>pytest.raises(SystemExit):</highlight></codeline>
+<codeline lineno="357"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a4daac68bc563432bf25c85dc78081a25" kindref="member">generate_doc</ref>(</highlight><highlight class="stringliteral">&apos;http://api.example.com&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;fake-token&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;src_folder&apos;</highlight><highlight class="normal">)</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/test__web__config_8py.xml b/docs345/xml/test__web__config_8py.xml
new file mode 100644
index 0000000..9482cac
--- /dev/null
+++ b/docs345/xml/test__web__config_8py.xml
@@ -0,0 +1,110 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="test__web__config_8py" kind="file" language="Python">
+    <compoundname>test_web_config.py</compoundname>
+    <innerclass refid="classtests_1_1test__web__config_1_1TestWebConfig" prot="public">tests::test_web_config::TestWebConfig</innerclass>
+    <innernamespace refid="namespacetests">tests</innernamespace>
+    <innernamespace refid="namespacetests_1_1test__web__config">tests::test_web_config</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacetests_1_1test__web__config" refkind="compound"><highlight class="keyword">import</highlight><highlight class="normal"><sp/>pytest</highlight></codeline>
+<codeline lineno="2"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>json</highlight></codeline>
+<codeline lineno="3"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>http.server</highlight></codeline>
+<codeline lineno="4"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>threading</highlight></codeline>
+<codeline lineno="5"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>socketserver</highlight></codeline>
+<codeline lineno="6"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>time</highlight></codeline>
+<codeline lineno="7"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>unittest.mock<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>patch,<sp/>MagicMock,<sp/>mock_open</highlight></codeline>
+<codeline lineno="8"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>webbrowser</highlight></codeline>
+<codeline lineno="9"><highlight class="normal"></highlight></codeline>
+<codeline lineno="10"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands" kindref="compound">penify_hook.commands.config_commands</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>config_llm_web,<sp/>config_jira_web</highlight></codeline>
+<codeline lineno="11"><highlight class="normal"></highlight></codeline>
+<codeline lineno="12"><highlight class="normal"></highlight></codeline>
+<codeline lineno="13" refid="classtests_1_1test__web__config_1_1TestWebConfig" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__web__config_1_1TestWebConfig" kindref="compound">TestWebConfig</ref>:</highlight></codeline>
+<codeline lineno="14"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="15"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;webbrowser.open&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="16"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;socketserver.TCPServer&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="17"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;pkg_resources.resource_filename&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="18" refid="classtests_1_1test__web__config_1_1TestWebConfig_1afc6440352201d207ea8b4d26f8ccfa35" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__web__config_1_1TestWebConfig_1afc6440352201d207ea8b4d26f8ccfa35" kindref="member">test_config_llm_web_server_setup</ref>(self,<sp/>mock_resource_filename,<sp/>mock_server,<sp/>mock_webbrowser):</highlight></codeline>
+<codeline lineno="19"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Set<sp/>up<sp/>and<sp/>test<sp/>the<sp/>web<sp/>server<sp/>configuration<sp/>for<sp/>an<sp/>LLM<sp/>(Large<sp/>Language</highlight></codeline>
+<codeline lineno="20"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Model)<sp/>web<sp/>interface.</highlight></codeline>
+<codeline lineno="21"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="22"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>configures<sp/>a<sp/>mock<sp/>web<sp/>server<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>testing<sp/>purposes,</highlight></codeline>
+<codeline lineno="23"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>including<sp/>setting<sp/>up<sp/>resource<sp/>filenames,<sp/>mocking<sp/>server<sp/>behavior,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="24"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>verifying<sp/>that<sp/>the<sp/>web<sp/>browser<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>opened<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>the<sp/>server<sp/>starts</highlight></codeline>
+<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>correctly.<sp/>The<sp/>function<sp/>uses<sp/>various<sp/>mocks<sp/>to<sp/>simulate<sp/>external</highlight></codeline>
+<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>dependencies<sp/>such<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>`resource_filename`<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>`server`.</highlight></codeline>
+<codeline lineno="27"><highlight class="normal"></highlight></codeline>
+<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_resource_filename<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/>simulating<sp/>the<sp/>`resource_filename`<sp/>function.</highlight></codeline>
+<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_server<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/>simulating<sp/>the<sp/>context<sp/>manager<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>web<sp/>server.</highlight></codeline>
+<codeline lineno="31"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_webbrowser<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/>simulating<sp/>the<sp/>`webbrowser`<sp/>module.</highlight></codeline>
+<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="33"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="34"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup<sp/>mocks</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_resource_filename.return_value<sp/>=<sp/></highlight><highlight class="stringliteral">&apos;mock/template/path&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_server_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_server.return_value.__enter__.return_value<sp/>=<sp/>mock_server_instance</highlight></codeline>
+<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Mock<sp/>the<sp/>serve_forever<sp/>method<sp/>to<sp/>stop<sp/>after<sp/>being<sp/>called<sp/>once</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal">stop_server_after_call():</highlight></codeline>
+<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_server_instance.shutdown()</highlight></codeline>
+<codeline lineno="42"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_server_instance.serve_forever.side_effect<sp/>=<sp/>stop_server_after_call</highlight></codeline>
+<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function<sp/>with<sp/>patched<sp/>webbrowser</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>patch(</highlight><highlight class="stringliteral">&apos;builtins.print&apos;</highlight><highlight class="normal">):<sp/><sp/></highlight><highlight class="comment">#<sp/>Suppress<sp/>print<sp/>statements</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a185dfc34a655ed80e6c95939b6f3c35c" kindref="member">config_llm_web</ref>()</highlight></codeline>
+<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Verify<sp/>webbrowser<sp/>was<sp/>opened</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_webbrowser.assert_called_once()</highlight></codeline>
+<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>mock_webbrowser.call_args[0][0].startswith(</highlight><highlight class="stringliteral">&apos;http://localhost:&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Verify<sp/>server<sp/>was<sp/>started</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_server.assert_called_once()</highlight></codeline>
+<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_server_instance.serve_forever.assert_called_once()</highlight></codeline>
+<codeline lineno="55"><highlight class="normal"></highlight></codeline>
+<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;webbrowser.open&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;socketserver.TCPServer&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;pkg_resources.resource_filename&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="59" refid="classtests_1_1test__web__config_1_1TestWebConfig_1a06e600222e426b003850509cb1d3190a" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__web__config_1_1TestWebConfig_1a06e600222e426b003850509cb1d3190a" kindref="member">test_config_jira_web_server_setup</ref>(self,<sp/>mock_resource_filename,<sp/>mock_server,<sp/>mock_webbrowser):</highlight></codeline>
+<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>the<sp/>configuration<sp/>and<sp/>setup<sp/>of<sp/>a<sp/>JIRA<sp/>web<sp/>server.</highlight></codeline>
+<codeline lineno="61"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="62"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>tests<sp/>the<sp/>entire<sp/>process<sp/>of<sp/>setting<sp/>up<sp/>a<sp/>JIRA<sp/>web<sp/>server,</highlight></codeline>
+<codeline lineno="63"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>including<sp/>mocking<sp/>necessary<sp/>resources,<sp/>configuring<sp/>the<sp/>server<sp/>to<sp/>shut</highlight></codeline>
+<codeline lineno="64"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>down<sp/>after<sp/>handling<sp/>one<sp/>request,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>verifying<sp/>that<sp/>the<sp/>web<sp/>browser<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>opened<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>the<sp/>correct<sp/>URL.<sp/>The<sp/>function<sp/>uses<sp/>several<sp/>mocks<sp/>to<sp/>simulate</highlight></codeline>
+<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>external<sp/>dependencies<sp/>such<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>resource<sp/>files,<sp/>servers,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>web<sp/>browsers.</highlight></codeline>
+<codeline lineno="67"><highlight class="normal"></highlight></codeline>
+<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_resource_filename<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>simulating<sp/>the<sp/>`resource_filename`<sp/>function.</highlight></codeline>
+<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_server<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>simulating<sp/>the<sp/>server<sp/>setup.</highlight></codeline>
+<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_webbrowser<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>simulating<sp/>the<sp/>web<sp/>browser<sp/>opening.</highlight></codeline>
+<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="73"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="74"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup<sp/>mocks</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_resource_filename.return_value<sp/>=<sp/></highlight><highlight class="stringliteral">&apos;mock/template/path&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_server_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_server.return_value.__enter__.return_value<sp/>=<sp/>mock_server_instance</highlight></codeline>
+<codeline lineno="78"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Mock<sp/>the<sp/>serve_forever<sp/>method<sp/>to<sp/>stop<sp/>after<sp/>being<sp/>called<sp/>once</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal">stop_server_after_call():</highlight></codeline>
+<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_server_instance.shutdown()</highlight></codeline>
+<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_server_instance.serve_forever.side_effect<sp/>=<sp/>stop_server_after_call</highlight></codeline>
+<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function<sp/>with<sp/>patched<sp/>webbrowser</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="85"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>patch(</highlight><highlight class="stringliteral">&apos;builtins.print&apos;</highlight><highlight class="normal">):<sp/><sp/></highlight><highlight class="comment">#<sp/>Suppress<sp/>print<sp/>statements</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="86"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1af115198ea5d6808ccb98733957f50b06" kindref="member">config_jira_web</ref>()</highlight></codeline>
+<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Verify<sp/>webbrowser<sp/>was<sp/>opened</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_webbrowser.assert_called_once()</highlight></codeline>
+<codeline lineno="90"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>mock_webbrowser.call_args[0][0].startswith(</highlight><highlight class="stringliteral">&apos;http://localhost:&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="92"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Verify<sp/>server<sp/>was<sp/>started</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="93"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_server.assert_called_once()</highlight></codeline>
+<codeline lineno="94"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_server_instance.serve_forever.assert_called_once()</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_web_config.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/tests_2____init_____8py.xml b/docs345/xml/tests_2____init_____8py.xml
new file mode 100644
index 0000000..b5fdf08
--- /dev/null
+++ b/docs345/xml/tests_2____init_____8py.xml
@@ -0,0 +1,15 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="tests_2____init_____8py" kind="file" language="Python">
+    <compoundname>__init__.py</compoundname>
+    <innernamespace refid="namespacetests">tests</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacetests" refkind="compound"><highlight class="comment">#<sp/>Empty<sp/>file<sp/>to<sp/>make<sp/>tests<sp/>directory<sp/>a<sp/>proper<sp/>Python<sp/>package</highlight><highlight class="normal"></highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/__init__.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/ui__utils_8py.xml b/docs345/xml/ui__utils_8py.xml
new file mode 100644
index 0000000..52bf215
--- /dev/null
+++ b/docs345/xml/ui__utils_8py.xml
@@ -0,0 +1,263 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="ui__utils_8py" kind="file" language="Python">
+    <compoundname>ui_utils.py</compoundname>
+    <innernamespace refid="namespacepenify__hook">penify_hook</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1ui__utils">penify_hook::ui_utils</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacepenify__hook_1_1ui__utils" refkind="compound"><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="2"><highlight class="stringliteral">UI<sp/>utilities<sp/>for<sp/>Penify<sp/>CLI.</highlight></codeline>
+<codeline lineno="3"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="4"><highlight class="stringliteral">This<sp/>module<sp/>provides<sp/>utility<sp/>functions<sp/>for<sp/>consistent<sp/>UI<sp/>formatting,</highlight></codeline>
+<codeline lineno="5"><highlight class="stringliteral">colored<sp/>output,<sp/>and<sp/>progress<sp/>indicators<sp/>across<sp/>the<sp/>Penify<sp/>CLI<sp/>application.</highlight></codeline>
+<codeline lineno="6"><highlight class="stringliteral">&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="7"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>os</highlight></codeline>
+<codeline lineno="8"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>colorama<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>Fore,<sp/>Style,<sp/>init</highlight></codeline>
+<codeline lineno="9"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>tqdm<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>tqdm</highlight></codeline>
+<codeline lineno="10"><highlight class="normal"></highlight></codeline>
+<codeline lineno="11"><highlight class="normal"></highlight><highlight class="comment">#<sp/>Initialize<sp/>colorama<sp/>for<sp/>cross-platform<sp/>colored<sp/>terminal<sp/>output</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="12" refid="namespacepenify__hook_1_1ui__utils_1ab560cfade398ac1e0bd47befb52d9f71" refkind="member"><highlight class="normal">init(autoreset=</highlight><highlight class="keyword">True</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="13"><highlight class="normal"></highlight></codeline>
+<codeline lineno="14"><highlight class="normal"></highlight><highlight class="comment">#<sp/>Color<sp/>constants<sp/>for<sp/>different<sp/>message<sp/>types</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="15" refid="namespacepenify__hook_1_1ui__utils_1a9fdcb180915696f5d217032a62c3857c" refkind="member"><highlight class="normal">INFO_COLOR<sp/>=<sp/>Fore.CYAN</highlight></codeline>
+<codeline lineno="16" refid="namespacepenify__hook_1_1ui__utils_1a22c450c5e2b5394618ecf9b636560df4" refkind="member"><highlight class="normal">SUCCESS_COLOR<sp/>=<sp/>Fore.GREEN</highlight></codeline>
+<codeline lineno="17" refid="namespacepenify__hook_1_1ui__utils_1a177bc9b44157844c999e0c1c2c6936ff" refkind="member"><highlight class="normal">WARNING_COLOR<sp/>=<sp/>Fore.YELLOW</highlight></codeline>
+<codeline lineno="18" refid="namespacepenify__hook_1_1ui__utils_1a4ab4e61dfab7973c87bef59c6e1977fe" refkind="member"><highlight class="normal">ERROR_COLOR<sp/>=<sp/>Fore.RED</highlight></codeline>
+<codeline lineno="19" refid="namespacepenify__hook_1_1ui__utils_1aba01b8259f0d66cdc2b4a1b58f9736fc" refkind="member"><highlight class="normal">HIGHLIGHT_COLOR<sp/>=<sp/>Fore.BLUE</highlight></codeline>
+<codeline lineno="20" refid="namespacepenify__hook_1_1ui__utils_1aca0fcee81606857497520ae4290bc9f5" refkind="member"><highlight class="normal">NEUTRAL_COLOR<sp/>=<sp/>Fore.WHITE</highlight></codeline>
+<codeline lineno="21"><highlight class="normal"></highlight></codeline>
+<codeline lineno="22"><highlight class="normal"></highlight><highlight class="comment">#<sp/>Status<sp/>symbols</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="23" refid="namespacepenify__hook_1_1ui__utils_1a3c6fe4bd17c1a5fe76587225ae4beb3e" refkind="member"><highlight class="normal">SUCCESS_SYMBOL<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;✓&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="24" refid="namespacepenify__hook_1_1ui__utils_1a6eaea98f1a8cbe16a181647da2fc0a16" refkind="member"><highlight class="normal">WARNING_SYMBOL<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;○&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="25" refid="namespacepenify__hook_1_1ui__utils_1aa564e1e1d016c8227d076542e74cecb0" refkind="member"><highlight class="normal">ERROR_SYMBOL<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;✗&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="26" refid="namespacepenify__hook_1_1ui__utils_1a3b208e2750a38dd09467a73e4afd9756" refkind="member"><highlight class="normal">PROCESSING_SYMBOL<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;⟳&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="27"><highlight class="normal"></highlight></codeline>
+<codeline lineno="28" refid="namespacepenify__hook_1_1ui__utils_1a92c3e466d1912058167be2eacf85b9f6" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1ui__utils_1a92c3e466d1912058167be2eacf85b9f6" kindref="member">format_info</ref>(message):</highlight></codeline>
+<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Format<sp/>an<sp/>informational<sp/>message<sp/>with<sp/>appropriate<sp/>color.</highlight></codeline>
+<codeline lineno="30"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="31"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="32"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>message<sp/>(str):<sp/>The<sp/>text<sp/>of<sp/>the<sp/>informational<sp/>message<sp/>to<sp/>be<sp/>formatted.</highlight></codeline>
+<codeline lineno="33"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="34"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="35"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>str:<sp/>The<sp/>formatted<sp/>informational<sp/>message<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>the<sp/>specified<sp/>color.</highlight></codeline>
+<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="37"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>f</highlight><highlight class="stringliteral">&quot;{INFO_COLOR}{message}{Style.RESET_ALL}&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="38"><highlight class="normal"></highlight></codeline>
+<codeline lineno="39" refid="namespacepenify__hook_1_1ui__utils_1a532cdb4de7c679ce8b29c3e9116c4776" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1ui__utils_1a532cdb4de7c679ce8b29c3e9116c4776" kindref="member">format_success</ref>(message):</highlight></codeline>
+<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Format<sp/>a<sp/>success<sp/>message<sp/>with<sp/>appropriate<sp/>color.</highlight></codeline>
+<codeline lineno="41"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="42"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>takes<sp/>a<sp/>message<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>input<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>wraps<sp/>it<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>ANSI<sp/>escape<sp/>codes</highlight></codeline>
+<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/>to<sp/>display<sp/>it<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>green,<sp/>indicating<sp/>a<sp/>successful<sp/>operation.<sp/>The</highlight></codeline>
+<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/>Style.RESET_ALL<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>applied<sp/>at<sp/>the<sp/>end<sp/>to<sp/>ensure<sp/>that<sp/>any<sp/>subsequent<sp/>text</highlight></codeline>
+<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>displayed<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the<sp/>default<sp/>style.</highlight></codeline>
+<codeline lineno="46"><highlight class="normal"></highlight></codeline>
+<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>message<sp/>(str):<sp/>The<sp/>message<sp/>to<sp/>be<sp/>formatted<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>a<sp/>success<sp/>message.</highlight></codeline>
+<codeline lineno="49"><highlight class="normal"></highlight></codeline>
+<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>str:<sp/>The<sp/>formatted<sp/>success<sp/>message<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>green<sp/>color<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>reset<sp/>style.</highlight></codeline>
+<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="53"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>f</highlight><highlight class="stringliteral">&quot;{SUCCESS_COLOR}{message}{Style.RESET_ALL}&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="54"><highlight class="normal"></highlight></codeline>
+<codeline lineno="55" refid="namespacepenify__hook_1_1ui__utils_1a0a6fd2613c6fe053b6e4356cd9e5cda2" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1ui__utils_1a0a6fd2613c6fe053b6e4356cd9e5cda2" kindref="member">format_warning</ref>(message):</highlight></codeline>
+<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Format<sp/>a<sp/>warning<sp/>message<sp/>with<sp/>appropriate<sp/>color.</highlight></codeline>
+<codeline lineno="57"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="58"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="59"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>message<sp/>(str):<sp/>The<sp/>warning<sp/>message<sp/>to<sp/>be<sp/>formatted.</highlight></codeline>
+<codeline lineno="60"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="61"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="62"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>str:<sp/>The<sp/>formatted<sp/>warning<sp/>message<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>the<sp/>specified<sp/>color.</highlight></codeline>
+<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="64"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>f</highlight><highlight class="stringliteral">&quot;{WARNING_COLOR}{message}{Style.RESET_ALL}&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="65"><highlight class="normal"></highlight></codeline>
+<codeline lineno="66" refid="namespacepenify__hook_1_1ui__utils_1a4dd934568897433fa73f9cc182ac4a3e" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1ui__utils_1a4dd934568897433fa73f9cc182ac4a3e" kindref="member">format_error</ref>(message):</highlight></codeline>
+<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Format<sp/>an<sp/>error<sp/>message<sp/>with<sp/>appropriate<sp/>color.</highlight></codeline>
+<codeline lineno="68"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="69"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>takes<sp/>a<sp/>plain<sp/>error<sp/>message<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>wraps<sp/>it<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>ANSI<sp/>escape</highlight></codeline>
+<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/>codes<sp/>to<sp/>apply<sp/>the<sp/>specified<sp/>error<sp/>color,<sp/>ensuring<sp/>that<sp/>the<sp/>error</highlight></codeline>
+<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/>message<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>visually<sp/>distinct<sp/>when<sp/>output.<sp/>The<sp/>function<sp/>supports<sp/>various</highlight></codeline>
+<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/>error<sp/>colors<sp/>defined<sp/>by<sp/>constants<sp/>like<sp/>`ERROR_COLOR`.</highlight></codeline>
+<codeline lineno="73"><highlight class="normal"></highlight></codeline>
+<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>message<sp/>(str):<sp/>The<sp/>plain<sp/>text<sp/>error<sp/>message<sp/>to<sp/>be<sp/>formatted.</highlight></codeline>
+<codeline lineno="76"><highlight class="normal"></highlight></codeline>
+<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="78"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>str:<sp/>The<sp/>formatted<sp/>error<sp/>message<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>the<sp/>error<sp/>color<sp/>applied.</highlight></codeline>
+<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="80"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>f</highlight><highlight class="stringliteral">&quot;{ERROR_COLOR}{message}{Style.RESET_ALL}&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="81"><highlight class="normal"></highlight></codeline>
+<codeline lineno="82" refid="namespacepenify__hook_1_1ui__utils_1adcb97fc26b405d2b9cdf5eb7aecc5452" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1ui__utils_1adcb97fc26b405d2b9cdf5eb7aecc5452" kindref="member">format_highlight</ref>(message):</highlight></codeline>
+<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Format<sp/>a<sp/>highlighted<sp/>message<sp/>with<sp/>appropriate<sp/>color.</highlight></codeline>
+<codeline lineno="84"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="85"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="86"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>message<sp/>(str):<sp/>The<sp/>message<sp/>to<sp/>be<sp/>formatted<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>highlighted.</highlight></codeline>
+<codeline lineno="87"><highlight class="normal"></highlight></codeline>
+<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>str:<sp/>The<sp/>formatted<sp/>message<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>applied<sp/>highlight<sp/>style.</highlight></codeline>
+<codeline lineno="90"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="91"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>f</highlight><highlight class="stringliteral">&quot;{HIGHLIGHT_COLOR}{message}{Style.RESET_ALL}&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="92"><highlight class="normal"></highlight></codeline>
+<codeline lineno="93" refid="namespacepenify__hook_1_1ui__utils_1af3441fb3c2c3850b8b3b6455a9fdaba4" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1ui__utils_1af3441fb3c2c3850b8b3b6455a9fdaba4" kindref="member">format_file_path</ref>(file_path):</highlight></codeline>
+<codeline lineno="94"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Format<sp/>a<sp/>file<sp/>path<sp/>with<sp/>appropriate<sp/>color.</highlight></codeline>
+<codeline lineno="95"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="96"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>takes<sp/>a<sp/>file<sp/>path<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>input<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>wraps<sp/>it<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>ANSI<sp/>escape</highlight></codeline>
+<codeline lineno="97"><highlight class="normal"><sp/><sp/><sp/><sp/>codes<sp/>to<sp/>apply<sp/>a<sp/>warning<sp/>color.<sp/>The<sp/>original<sp/>file<sp/>path<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>then<sp/>reset<sp/>to</highlight></codeline>
+<codeline lineno="98"><highlight class="normal"><sp/><sp/><sp/><sp/>default<sp/>style<sp/>using<sp/>Style.RESET_ALL.</highlight></codeline>
+<codeline lineno="99"><highlight class="normal"></highlight></codeline>
+<codeline lineno="100"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="101"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>file_path<sp/>(str):<sp/>The<sp/>file<sp/>path<sp/>to<sp/>be<sp/>formatted.</highlight></codeline>
+<codeline lineno="102"><highlight class="normal"></highlight></codeline>
+<codeline lineno="103"><highlight class="normal"><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="104"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>str:<sp/>The<sp/>formatted<sp/>file<sp/>path<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>the<sp/>warning<sp/>color<sp/>applied.</highlight></codeline>
+<codeline lineno="105"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="106"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>f</highlight><highlight class="stringliteral">&quot;{WARNING_COLOR}{file_path}{Style.RESET_ALL}&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="107"><highlight class="normal"></highlight></codeline>
+<codeline lineno="108" refid="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" kindref="member">print_info</ref>(message):</highlight></codeline>
+<codeline lineno="109"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Print<sp/>an<sp/>informational<sp/>message<sp/>with<sp/>appropriate<sp/>formatting.</highlight></codeline>
+<codeline lineno="110"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="111"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>takes<sp/>a<sp/>string<sp/>message<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>input<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>prints<sp/>it<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>a</highlight></codeline>
+<codeline lineno="112"><highlight class="normal"><sp/><sp/><sp/><sp/>formatted<sp/>manner.<sp/>It<sp/>utilizes<sp/>the<sp/>`format_info`<sp/>function<sp/>to<sp/>apply<sp/>any</highlight></codeline>
+<codeline lineno="113"><highlight class="normal"><sp/><sp/><sp/><sp/>necessary<sp/>formatting<sp/>before<sp/>printing.</highlight></codeline>
+<codeline lineno="114"><highlight class="normal"></highlight></codeline>
+<codeline lineno="115"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="116"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>message<sp/>(str):<sp/>The<sp/>message<sp/>to<sp/>be<sp/>printed.</highlight></codeline>
+<codeline lineno="117"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="118"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>print(<ref refid="namespacepenify__hook_1_1ui__utils_1a92c3e466d1912058167be2eacf85b9f6" kindref="member">format_info</ref>(message))</highlight></codeline>
+<codeline lineno="119"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="120" refid="namespacepenify__hook_1_1ui__utils_1a2b16aa6b68a9edea5f29f84f1c4be79a" refkind="member"><highlight class="stringliteral"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1ui__utils_1a2b16aa6b68a9edea5f29f84f1c4be79a" kindref="member">print_success</ref>(message):</highlight></codeline>
+<codeline lineno="121"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Print<sp/>a<sp/>formatted<sp/>success<sp/>message.</highlight></codeline>
+<codeline lineno="122"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="123"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>takes<sp/>a<sp/>string<sp/>`message`<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>prints<sp/>it<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>a<sp/>formatted</highlight></codeline>
+<codeline lineno="124"><highlight class="normal"><sp/><sp/><sp/><sp/>success<sp/>message.<sp/>The<sp/>formatting<sp/>includes<sp/>adding<sp/>a<sp/>prefix<sp/></highlight><highlight class="stringliteral">&quot;Success:<sp/>&quot;</highlight><highlight class="normal"><sp/>to</highlight></codeline>
+<codeline lineno="125"><highlight class="normal"><sp/><sp/><sp/><sp/>the<sp/>message<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>enclosing<sp/>it<sp/>within<sp/>asterisks<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>emphasis.</highlight></codeline>
+<codeline lineno="126"><highlight class="normal"></highlight></codeline>
+<codeline lineno="127"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="128"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>message<sp/>(str):<sp/>The<sp/>message<sp/>to<sp/>be<sp/>printed<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>a<sp/>success<sp/>message.</highlight></codeline>
+<codeline lineno="129"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="130"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>print(<ref refid="namespacepenify__hook_1_1ui__utils_1a532cdb4de7c679ce8b29c3e9116c4776" kindref="member">format_success</ref>(message))</highlight></codeline>
+<codeline lineno="131"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="132" refid="namespacepenify__hook_1_1ui__utils_1a1ffbb9671dbe233770268e2dd66a67fa" refkind="member"><highlight class="stringliteral"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1ui__utils_1a1ffbb9671dbe233770268e2dd66a67fa" kindref="member">print_warning</ref>(message):</highlight></codeline>
+<codeline lineno="133"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Print<sp/>a<sp/>warning<sp/>message<sp/>with<sp/>appropriate<sp/>formatting.</highlight></codeline>
+<codeline lineno="134"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="135"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>takes<sp/>a<sp/>warning<sp/>message<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>input<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>prints<sp/>it<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="136"><highlight class="normal"><sp/><sp/><sp/><sp/>formatted<sp/>output.<sp/>The<sp/>formatting<sp/>may<sp/>include<sp/>color,<sp/>timestamp,<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/>other</highlight></codeline>
+<codeline lineno="137"><highlight class="normal"><sp/><sp/><sp/><sp/>styles<sp/>to<sp/>emphasize<sp/>that<sp/>it<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>a<sp/>warning.</highlight></codeline>
+<codeline lineno="138"><highlight class="normal"></highlight></codeline>
+<codeline lineno="139"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="140"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>message<sp/>(str):<sp/>The<sp/>warning<sp/>message<sp/>to<sp/>be<sp/>printed.</highlight></codeline>
+<codeline lineno="141"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="142"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>print(<ref refid="namespacepenify__hook_1_1ui__utils_1a0a6fd2613c6fe053b6e4356cd9e5cda2" kindref="member">format_warning</ref>(message))</highlight></codeline>
+<codeline lineno="143"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="144" refid="namespacepenify__hook_1_1ui__utils_1a6f0acd7dd91abfe67d0807803bc3b65f" refkind="member"><highlight class="stringliteral"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1ui__utils_1a6f0acd7dd91abfe67d0807803bc3b65f" kindref="member">print_error</ref>(message):</highlight></codeline>
+<codeline lineno="145"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Print<sp/>an<sp/>error<sp/>message<sp/>with<sp/>appropriate<sp/>formatting.</highlight></codeline>
+<codeline lineno="146"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="147"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>takes<sp/>a<sp/>string<sp/>message,<sp/>formats<sp/>it<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>an<sp/>error<sp/>message,</highlight></codeline>
+<codeline lineno="148"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>then<sp/>prints<sp/>it.<sp/>The<sp/>formatting<sp/>typically<sp/>includes<sp/>prefixing<sp/>the</highlight></codeline>
+<codeline lineno="149"><highlight class="normal"><sp/><sp/><sp/><sp/>message<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&quot;Error:<sp/>&quot;</highlight><highlight class="normal"><sp/>to<sp/>clearly<sp/>indicate<sp/>that<sp/>it<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>an<sp/>error.</highlight></codeline>
+<codeline lineno="150"><highlight class="normal"></highlight></codeline>
+<codeline lineno="151"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="152"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>message<sp/>(str):<sp/>The<sp/>error<sp/>message<sp/>to<sp/>be<sp/>printed.</highlight></codeline>
+<codeline lineno="153"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="154"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>print(<ref refid="namespacepenify__hook_1_1ui__utils_1a4dd934568897433fa73f9cc182ac4a3e" kindref="member">format_error</ref>(message))</highlight></codeline>
+<codeline lineno="155"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="156" refid="namespacepenify__hook_1_1ui__utils_1adfcbbfe39029ab6d1dd33e7bf75ae115" refkind="member"><highlight class="stringliteral"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1ui__utils_1adfcbbfe39029ab6d1dd33e7bf75ae115" kindref="member">print_processing</ref>(file_path):</highlight></codeline>
+<codeline lineno="157"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Print<sp/>a<sp/>processing<sp/>message<sp/>for<sp/>a<sp/>specified<sp/>file.</highlight></codeline>
+<codeline lineno="158"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="159"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>takes<sp/>a<sp/>file<sp/>path,<sp/>formats<sp/>it<sp/>using<sp/>`format_file_path`,</highlight></codeline>
+<codeline lineno="160"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>then<sp/>prints<sp/>a<sp/>formatted<sp/>message<sp/>indicating<sp/>that<sp/>the<sp/>file<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>being</highlight></codeline>
+<codeline lineno="161"><highlight class="normal"><sp/><sp/><sp/><sp/>processed.<sp/>The<sp/>formatted<sp/>path<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>highlighted<sp/>using<sp/>`format_highlight`.</highlight></codeline>
+<codeline lineno="162"><highlight class="normal"></highlight></codeline>
+<codeline lineno="163"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="164"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>file_path<sp/>(str):<sp/>The<sp/>path<sp/>of<sp/>the<sp/>file<sp/>to<sp/>be<sp/>processed.</highlight></codeline>
+<codeline lineno="165"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="166"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>formatted_path<sp/>=<sp/><ref refid="namespacepenify__hook_1_1ui__utils_1af3441fb3c2c3850b8b3b6455a9fdaba4" kindref="member">format_file_path</ref>(file_path)</highlight></codeline>
+<codeline lineno="167"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>print(f&quot;\n{format_highlight(f&apos;Processing<sp/>file:<sp/>{formatted_path}&apos;)}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="168"><highlight class="normal"></highlight></codeline>
+<codeline lineno="169" refid="namespacepenify__hook_1_1ui__utils_1aa6e684c00e26199440137a87ed9b195c" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1ui__utils_1aa6e684c00e26199440137a87ed9b195c" kindref="member">print_status</ref>(status,<sp/>message):</highlight></codeline>
+<codeline lineno="170"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Print<sp/>a<sp/>status<sp/>message<sp/>with<sp/>an<sp/>appropriate<sp/>symbol.</highlight></codeline>
+<codeline lineno="171"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="172"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>takes<sp/>a<sp/>status<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>a<sp/>message,<sp/>then<sp/>prints<sp/>them<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>a</highlight></codeline>
+<codeline lineno="173"><highlight class="normal"><sp/><sp/><sp/><sp/>colored<sp/>symbol<sp/>that<sp/>corresponds<sp/>to<sp/>the<sp/>given<sp/>status.<sp/>The<sp/>available</highlight></codeline>
+<codeline lineno="174"><highlight class="normal"><sp/><sp/><sp/><sp/>statuses<sp/>are<sp/></highlight><highlight class="stringliteral">&apos;success&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;warning&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;error&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>any<sp/>other<sp/>value<sp/>will</highlight></codeline>
+<codeline lineno="175"><highlight class="normal"><sp/><sp/><sp/><sp/>default<sp/>to<sp/>a<sp/>processing<sp/>indicator.</highlight></codeline>
+<codeline lineno="176"><highlight class="normal"></highlight></codeline>
+<codeline lineno="177"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="178"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>status<sp/>(str):<sp/>The<sp/>status<sp/>type<sp/>(</highlight><highlight class="stringliteral">&apos;success&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;warning&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;error&apos;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/>another<sp/>string.</highlight></codeline>
+<codeline lineno="179"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>message<sp/>(str):<sp/>The<sp/>message<sp/>to<sp/>be<sp/>displayed<sp/>along<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>the<sp/>symbol.</highlight></codeline>
+<codeline lineno="180"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="181"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>status<sp/>==<sp/></highlight><highlight class="stringliteral">&apos;success&apos;</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="182"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;<sp/><sp/>{SUCCESS_COLOR}{SUCCESS_SYMBOL}<sp/>{message}{Style.RESET_ALL}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="183"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">elif</highlight><highlight class="normal"><sp/>status<sp/>==<sp/></highlight><highlight class="stringliteral">&apos;warning&apos;</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="184"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;<sp/><sp/>{NEUTRAL_COLOR}{WARNING_SYMBOL}<sp/>{message}{Style.RESET_ALL}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="185"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">elif</highlight><highlight class="normal"><sp/>status<sp/>==<sp/></highlight><highlight class="stringliteral">&apos;error&apos;</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="186"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;<sp/><sp/>{ERROR_COLOR}{ERROR_SYMBOL}<sp/>{message}{Style.RESET_ALL}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="187"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="188"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;<sp/><sp/>{PROCESSING_SYMBOL}<sp/>{message}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="189"><highlight class="normal"></highlight></codeline>
+<codeline lineno="190" refid="namespacepenify__hook_1_1ui__utils_1a12b92532b1458af94f3649d411b5505c" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1ui__utils_1a12b92532b1458af94f3649d411b5505c" kindref="member">create_progress_bar</ref>(total,<sp/>desc=&quot;Processing&quot;,<sp/>unit=&quot;item&quot;):</highlight></codeline>
+<codeline lineno="191"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Create<sp/>a<sp/>tqdm<sp/>progress<sp/>bar<sp/>with<sp/>consistent<sp/>styling.</highlight></codeline>
+<codeline lineno="192"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="193"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="194"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>total<sp/>(int):<sp/>Total<sp/>number<sp/>of<sp/>items<sp/>to<sp/>process.</highlight></codeline>
+<codeline lineno="195"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>desc<sp/>(str):<sp/>Description<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>progress<sp/>bar.<sp/>Defaults<sp/>to<sp/></highlight><highlight class="stringliteral">&quot;Processing&quot;</highlight><highlight class="normal">.</highlight></codeline>
+<codeline lineno="196"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>unit<sp/>(str):<sp/>Unit<sp/>label<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>progress<sp/>items.<sp/>Defaults<sp/>to<sp/></highlight><highlight class="stringliteral">&quot;item&quot;</highlight><highlight class="normal">.</highlight></codeline>
+<codeline lineno="197"><highlight class="normal"></highlight></codeline>
+<codeline lineno="198"><highlight class="normal"><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="199"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>tqdm:<sp/>A<sp/>configured<sp/>tqdm<sp/>progress<sp/>bar<sp/>instance.</highlight></codeline>
+<codeline lineno="200"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="201"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>tqdm(</highlight></codeline>
+<codeline lineno="202"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>total=total,</highlight></codeline>
+<codeline lineno="203"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>desc=<ref refid="namespacepenify__hook_1_1ui__utils_1a92c3e466d1912058167be2eacf85b9f6" kindref="member">format_info</ref>(desc),</highlight></codeline>
+<codeline lineno="204"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>unit=unit,</highlight></codeline>
+<codeline lineno="205"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>ncols=80,</highlight></codeline>
+<codeline lineno="206"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>ascii=</highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="207"><highlight class="normal"><sp/><sp/><sp/><sp/>)</highlight></codeline>
+<codeline lineno="208"><highlight class="normal"></highlight></codeline>
+<codeline lineno="209" refid="namespacepenify__hook_1_1ui__utils_1a3da02cd1140179a9ce60f62c85fccfef" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1ui__utils_1a3da02cd1140179a9ce60f62c85fccfef" kindref="member">create_stage_progress_bar</ref>(stages,<sp/>desc=&quot;Processing&quot;):</highlight></codeline>
+<codeline lineno="210"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Create<sp/>a<sp/>tqdm<sp/>progress<sp/>bar<sp/>for<sp/>processing<sp/>stages<sp/>with<sp/>consistent</highlight></codeline>
+<codeline lineno="211"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>styling.</highlight></codeline>
+<codeline lineno="212"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="213"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>initializes<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>returns<sp/>a<sp/>tqdm<sp/>progress<sp/>bar<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="214"><highlight class="normal"><sp/><sp/><sp/><sp/>tracking<sp/>the<sp/>progress<sp/>through<sp/>a<sp/>series<sp/>of<sp/>stages.<sp/>It<sp/>also<sp/>provides<sp/>a</highlight></codeline>
+<codeline lineno="215"><highlight class="normal"><sp/><sp/><sp/><sp/>description<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>progress<sp/>bar<sp/>to<sp/>enhance<sp/>its<sp/>usability.</highlight></codeline>
+<codeline lineno="216"><highlight class="normal"></highlight></codeline>
+<codeline lineno="217"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="218"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>stages<sp/>(list):<sp/>A<sp/>list<sp/>of<sp/>strings<sp/>representing<sp/>individual<sp/>stages<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the<sp/>process.</highlight></codeline>
+<codeline lineno="219"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>desc<sp/>(str?):<sp/>A<sp/>description<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>progress<sp/>bar.<sp/>Defaults<sp/>to<sp/></highlight><highlight class="stringliteral">&quot;Processing&quot;</highlight><highlight class="normal">.</highlight></codeline>
+<codeline lineno="220"><highlight class="normal"></highlight></codeline>
+<codeline lineno="221"><highlight class="normal"><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="222"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>tuple:<sp/>A<sp/>tuple<sp/>containing<sp/>the<sp/>tqdm<sp/>progress<sp/>bar<sp/>object<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>the<sp/>list<sp/>of<sp/>stages.</highlight></codeline>
+<codeline lineno="223"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="224"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>pbar<sp/>=<sp/>tqdm(</highlight></codeline>
+<codeline lineno="225"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>total=len(stages),</highlight></codeline>
+<codeline lineno="226"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>desc=<ref refid="namespacepenify__hook_1_1ui__utils_1a92c3e466d1912058167be2eacf85b9f6" kindref="member">format_info</ref>(desc),</highlight></codeline>
+<codeline lineno="227"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>unit=&quot;step&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="228"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>ncols=80,</highlight></codeline>
+<codeline lineno="229"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>ascii=</highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="230"><highlight class="normal"><sp/><sp/><sp/><sp/>)</highlight></codeline>
+<codeline lineno="231"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>pbar,<sp/>stages</highlight></codeline>
+<codeline lineno="232"><highlight class="normal"></highlight></codeline>
+<codeline lineno="233" refid="namespacepenify__hook_1_1ui__utils_1a5a7340d0fc60fb80f17514d60bf45f1d" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1ui__utils_1a5a7340d0fc60fb80f17514d60bf45f1d" kindref="member">update_stage</ref>(pbar,<sp/>stage_name):</highlight></codeline>
+<codeline lineno="234"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Update<sp/>the<sp/>progress<sp/>bar<sp/>with<sp/>a<sp/>new<sp/>stage<sp/>name.</highlight></codeline>
+<codeline lineno="235"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="236"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>updates<sp/>the<sp/>provided<sp/>tqdm<sp/>progress<sp/>bar<sp/>to<sp/>reflect<sp/>the</highlight></codeline>
+<codeline lineno="237"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>current<sp/>stage<sp/>of<sp/>a<sp/>process.<sp/>It<sp/>clears<sp/>any<sp/>existing<sp/>postfix<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>sets<sp/>a</highlight></codeline>
+<codeline lineno="238"><highlight class="normal"><sp/><sp/><sp/><sp/>new<sp/>description<sp/>based<sp/>on<sp/>the<sp/>provided<sp/>stage<sp/>name.<sp/>The<sp/>display<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>then</highlight></codeline>
+<codeline lineno="239"><highlight class="normal"><sp/><sp/><sp/><sp/>refreshed<sp/>to<sp/>ensure<sp/>that<sp/>the<sp/>update<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>visible<sp/>immediately.</highlight></codeline>
+<codeline lineno="240"><highlight class="normal"></highlight></codeline>
+<codeline lineno="241"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="242"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pbar<sp/>(tqdm):<sp/>The<sp/>progress<sp/>bar<sp/>object<sp/>to<sp/>be<sp/>updated.</highlight></codeline>
+<codeline lineno="243"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>stage_name<sp/>(str):<sp/>A<sp/>string<sp/>representing<sp/>the<sp/>current<sp/>stage<sp/>of<sp/>the<sp/>process.</highlight></codeline>
+<codeline lineno="244"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="245"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Force<sp/>refresh<sp/>with<sp/>a<sp/>custom<sp/>description<sp/>and<sp/>ensure<sp/>it&apos;s<sp/>visible</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="246"><highlight class="normal"><sp/><sp/><sp/><sp/>pbar.set_postfix_str(</highlight><highlight class="stringliteral">&quot;&quot;</highlight><highlight class="normal">)<sp/><sp/></highlight><highlight class="comment">#<sp/>Clear<sp/>any<sp/>existing<sp/>postfix</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="247"><highlight class="normal"><sp/><sp/><sp/><sp/>pbar.set_description_str(f</highlight><highlight class="stringliteral">&quot;{format_info(stage_name)}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="248"><highlight class="normal"><sp/><sp/><sp/><sp/>pbar.refresh()<sp/><sp/></highlight><highlight class="comment">#<sp/>Force<sp/>refresh<sp/>the<sp/>display</highlight><highlight class="normal"></highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/utils_8py.xml b/docs345/xml/utils_8py.xml
new file mode 100644
index 0000000..ba7e019
--- /dev/null
+++ b/docs345/xml/utils_8py.xml
@@ -0,0 +1,99 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="utils_8py" kind="file" language="Python">
+    <compoundname>utils.py</compoundname>
+    <innerclass refid="classpenify__hook_1_1utils_1_1GitRepoNotFoundError" prot="public">penify_hook::utils::GitRepoNotFoundError</innerclass>
+    <innernamespace refid="namespacepenify__hook">penify_hook</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1utils">penify_hook::utils</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacepenify__hook_1_1utils" refkind="compound"><highlight class="keyword">import</highlight><highlight class="normal"><sp/>logging</highlight></codeline>
+<codeline lineno="2"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>os</highlight></codeline>
+<codeline lineno="3"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>re</highlight></codeline>
+<codeline lineno="4"><highlight class="normal"></highlight></codeline>
+<codeline lineno="5"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>git<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>Repo</highlight></codeline>
+<codeline lineno="6" refid="namespacepenify__hook_1_1utils_1a0c0c1ed6b197038085c94a90ceedfb01" refkind="member"><highlight class="normal">logger<sp/>=<sp/>logging.getLogger(__name__)</highlight></codeline>
+<codeline lineno="7"><highlight class="normal"></highlight></codeline>
+<codeline lineno="8"><highlight class="normal"></highlight></codeline>
+<codeline lineno="9" refid="classpenify__hook_1_1utils_1_1GitRepoNotFoundError" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1utils_1_1GitRepoNotFoundError" kindref="compound">GitRepoNotFoundError</ref>(<ref refid="classException" kindref="compound">Exception</ref>):</highlight></codeline>
+<codeline lineno="10"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">pass</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="11"><highlight class="normal"></highlight></codeline>
+<codeline lineno="12"><highlight class="normal"></highlight></codeline>
+<codeline lineno="13" refid="namespacepenify__hook_1_1utils_1ae236f3c4c8bf5dcddbb92b4c2065eea3" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1utils_1ae236f3c4c8bf5dcddbb92b4c2065eea3" kindref="member">get_repo_details</ref>(repo:<sp/>Repo):</highlight></codeline>
+<codeline lineno="14"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Determine<sp/>the<sp/>details<sp/>of<sp/>a<sp/>repository<sp/>including<sp/>its<sp/>remote<sp/>URL,<sp/>hosting<sp/>service,<sp/>organization<sp/>name,<sp/>and<sp/>repository<sp/>name.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="15"><highlight class="normal"><sp/><sp/><sp/><sp/>remote_url<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="16"><highlight class="normal"><sp/><sp/><sp/><sp/>hosting_service<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;Unknown&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="17"><highlight class="normal"><sp/><sp/><sp/><sp/>org_name<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="18"><highlight class="normal"><sp/><sp/><sp/><sp/>repo_name<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="19"><highlight class="normal"></highlight></codeline>
+<codeline lineno="20"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="21"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Get<sp/>the<sp/>remote<sp/>URL</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="22"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>remote<sp/>=<sp/>repo.remotes.origin.url</highlight></codeline>
+<codeline lineno="23"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>remote_url<sp/>=<sp/>remote</highlight></codeline>
+<codeline lineno="24"><highlight class="normal"></highlight></codeline>
+<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Determine<sp/>the<sp/>hosting<sp/>service<sp/>based<sp/>on<sp/>the<sp/>URL</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&quot;github.com&quot;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>remote:</highlight></codeline>
+<codeline lineno="27"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>hosting_service<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;GITHUB&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>match<sp/>=<sp/>re.match(</highlight><highlight class="stringliteral">r&quot;.*github\.com[:/](.*?)/(.*?)(\.git)?$&quot;</highlight><highlight class="normal">,<sp/>remote)</highlight></codeline>
+<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">elif</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&quot;dev.azure.com&quot;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>remote:</highlight></codeline>
+<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>hosting_service<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;AZUREDEVOPS&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="31"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>match<sp/>=<sp/>re.match(</highlight><highlight class="stringliteral">r&quot;.*dev\.azure\.com/(.*?)/(.*?)/_git/(.*?)(\.git)?$&quot;</highlight><highlight class="normal">,<sp/>remote)</highlight></codeline>
+<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">elif</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&quot;visualstudio.com&quot;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>remote:</highlight></codeline>
+<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>hosting_service<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;AZUREDEVOPS&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>match<sp/>=<sp/>re.match(</highlight><highlight class="stringliteral">r&quot;.*@(.*?)\.visualstudio\.com/(.*?)/_git/(.*?)(\.git)?$&quot;</highlight><highlight class="normal">,<sp/>remote)</highlight></codeline>
+<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">elif</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&quot;bitbucket.org&quot;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>remote:</highlight></codeline>
+<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>hosting_service<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;BITBUCKET&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>match<sp/>=<sp/>re.match(</highlight><highlight class="stringliteral">r&quot;.*bitbucket\.org[:/](.*?)/(.*?)(\.git)?$&quot;</highlight><highlight class="normal">,<sp/>remote)</highlight></codeline>
+<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">elif</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&quot;gitlab.com&quot;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>remote:</highlight></codeline>
+<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>hosting_service<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;GITLAB&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>match<sp/>=<sp/>re.match(</highlight><highlight class="stringliteral">r&quot;.*gitlab\.com[:/](.*?)/(.*?)(\.git)?$&quot;</highlight><highlight class="normal">,<sp/>remote)</highlight></codeline>
+<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="42"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>hosting_service<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;Unknown<sp/>Hosting<sp/>Service&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>match<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="44"><highlight class="normal"></highlight></codeline>
+<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>match:</highlight></codeline>
+<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>org_name<sp/>=<sp/>match.group(1)</highlight></codeline>
+<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>repo_name<sp/>=<sp/>match.group(2)</highlight></codeline>
+<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>For<sp/>Azure<sp/>DevOps,<sp/>adjust<sp/>the<sp/>group<sp/>indices</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>hosting_service<sp/>==<sp/></highlight><highlight class="stringliteral">&quot;AZUREDEVOPS&quot;</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>repo_name<sp/>=<sp/>match.group(3)</highlight></codeline>
+<codeline lineno="52"><highlight class="normal"></highlight></codeline>
+<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logger.error(f</highlight><highlight class="stringliteral">&quot;Error<sp/>determining<sp/>GIT<sp/>provider:<sp/>{e}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="55"><highlight class="normal"></highlight></codeline>
+<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>{</highlight></codeline>
+<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;organization_name&quot;</highlight><highlight class="normal">:<sp/>org_name,</highlight></codeline>
+<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;repo_name&quot;</highlight><highlight class="normal">:<sp/>repo_name,</highlight></codeline>
+<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;vendor&quot;</highlight><highlight class="normal">:<sp/>hosting_service</highlight></codeline>
+<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="61"><highlight class="normal"></highlight></codeline>
+<codeline lineno="62" refid="namespacepenify__hook_1_1utils_1a95c3f9c80860d6a2e2d061d2fb660a3f" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1utils_1a95c3f9c80860d6a2e2d061d2fb660a3f" kindref="member">recursive_search_git_folder</ref>(folder_path):</highlight></codeline>
+<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Recursively<sp/>searches<sp/>for<sp/>a<sp/>.git<sp/>folder<sp/>starting<sp/>from<sp/>the<sp/>given<sp/>directory.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>os.path.isdir(folder_path):</highlight></codeline>
+<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;.git&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>os.listdir(folder_path):</highlight></codeline>
+<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>folder_path</highlight></codeline>
+<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>reached<sp/>the<sp/>root<sp/>of<sp/>the<sp/>filesystem</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">elif</highlight><highlight class="normal"><sp/>folder_path<sp/>==<sp/>os.path.dirname(folder_path):</highlight></codeline>
+<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1utils_1a95c3f9c80860d6a2e2d061d2fb660a3f" kindref="member">recursive_search_git_folder</ref>(os.path.dirname(folder_path))</highlight></codeline>
+<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="73" refid="namespacepenify__hook_1_1utils_1a4ec5335a4026c22a34a3a8ccf665a5f2" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1utils_1a4ec5335a4026c22a34a3a8ccf665a5f2" kindref="member">find_git_parent</ref>(path):</highlight></codeline>
+<codeline lineno="74"><highlight class="normal"></highlight></codeline>
+<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Traverse<sp/>up<sp/>from<sp/>the<sp/>given<sp/>path<sp/>to<sp/>find<sp/>the<sp/>nearest<sp/>directory<sp/>containing<sp/>a<sp/>.git<sp/>subdirectory.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/>current_dir<sp/>=<sp/>os.path.abspath(path)</highlight></codeline>
+<codeline lineno="77"><highlight class="normal"></highlight></codeline>
+<codeline lineno="78"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">while</highlight><highlight class="normal"><sp/>current_dir<sp/>!=<sp/>os.path.dirname(current_dir):<sp/><sp/></highlight><highlight class="comment">#<sp/>Traverse<sp/>up<sp/>to<sp/>the<sp/>root<sp/>directory</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>os.path.isdir(os.path.join(current_dir,<sp/></highlight><highlight class="stringliteral">&quot;.git&quot;</highlight><highlight class="normal">)):</highlight></codeline>
+<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>current_dir<sp/><sp/></highlight><highlight class="comment">#<sp/>Return<sp/>the<sp/>parent<sp/>folder<sp/>containing<sp/>the<sp/>.git<sp/>directory</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>current_dir<sp/>=<sp/>os.path.dirname(current_dir)</highlight></codeline>
+<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">raise</highlight><highlight class="normal"><sp/><ref refid="classpenify__hook_1_1utils_1_1GitRepoNotFoundError" kindref="compound">GitRepoNotFoundError</ref>(f</highlight><highlight class="stringliteral">&quot;No<sp/>Git<sp/>repository<sp/>found<sp/>in<sp/>the<sp/>path<sp/>or<sp/>any<sp/>of<sp/>its<sp/>parent<sp/>directories:<sp/>{path}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/utils.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs345/xml/xml.xsd b/docs345/xml/xml.xsd
new file mode 100644
index 0000000..9f80fe1
--- /dev/null
+++ b/docs345/xml/xml.xsd
@@ -0,0 +1,23 @@
+<?xml version='1.0'?>
+<xsd:schema targetNamespace="http://www.w3.org/XML/1998/namespace"
+            xmlns:xsd="http://www.w3.org/2001/XMLSchema"
+            xml:lang="en">
+
+  <xsd:attribute name="lang" type="xsd:language">
+  </xsd:attribute>
+
+  <xsd:attribute name="space" default="preserve">
+    <xsd:simpleType>
+      <xsd:restriction base="xsd:NCName">
+        <xsd:enumeration value="default"/>
+        <xsd:enumeration value="preserve"/>
+      </xsd:restriction>
+    </xsd:simpleType>
+  </xsd:attribute>
+
+  <xsd:attributeGroup name="specialAttrs">
+    <xsd:attribute ref="xml:lang"/>
+    <xsd:attribute ref="xml:space"/>
+  </xsd:attributeGroup>
+
+</xsd:schema>