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TestEpisodicMortality.cpp
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4182 lines (3968 loc) · 213 KB
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//---------------------------------------------------------------------------
// TestEpisodicMortality.cpp
//---------------------------------------------------------------------------
#include "TestEpisodicMortality.h"
#include <gtest/gtest.h>
#include "TreePopulation.h"
#include "SimManager.h"
#include "ModelMath.h"
#include "Grid.h"
#include <fstream>
#include <math.h>
#include <sstream>
/////////////////////////////////////////////////////////////////////////////
// DoMortEpisodeRun1()
// Performs the first run. This run has the following characteristics:
//
// Mort ep # |TS |Cut Ranges |Species |Cut Type |Cut Amt (abs) |Grids
//-----------|----|-----------|--------|---------|--------------|--------------
// 1 |1 |0 - 300 |2, 4 |% BA |35 |Whole plot
// 2 |3 |0 - 30, |5 |Abs BA |0.2, 0.2 |Whole plot
// | |40 - 80 | | | |
// 3 |3 |Min 0 |2, 8 |Clear |100% |Whole plot
//
// The mortality episode will be performed. Then the remaining trees are
// checked to make sure the proper ones were left alone.
//
// This run includes snags, and the event is aware of them, but is told
// not to include them
/////////////////////////////////////////////////////////////////////////////
TEST(EpisodicMortality, DoMortEpisodeRun1) {
clTreePopulation * p_oPop;
clTreeSearch *p_oAllTrees;
clTree *p_oTree;
clGrid *p_oResults;
std::stringstream sLabel;
float fTemp, fSp2LiveBA, fSp4LiveBA, fSp2DeadBA, fSp4DeadBA;
int *p_iC = new int[4];
int i, iNumXCells, iNumYCells, iX, iY, iNumSpecies, j, k;
clSimManager * p_oSimManager = new clSimManager( 7, 1, "" );
try {
p_oSimManager->ReadFile( WriteEpisodicMortalityXMLFile1() );
p_oPop = ( clTreePopulation * ) p_oSimManager->GetPopulationObject( "treepopulation" );
p_oResults = p_oSimManager->GetGridObject("Mortality Episode Results");
//Add many snags to make sure they don't get counted
for (i = 0; i < 100; i++) {
p_oPop->CreateTree(10, 10, 0, clTreePopulation::snag, 50);
}
for (i = 0; i < 100; i++) {
p_oPop->CreateTree(10, 10, 1, clTreePopulation::snag, 50);
}
for (i = 0; i < 100; i++) {
p_oPop->CreateTree(10, 10, 2, clTreePopulation::snag, 50);
}
for (i = 0; i < 100; i++) {
p_oPop->CreateTree(10, 10, 3, clTreePopulation::snag, 50);
}
for (i = 0; i < 100; i++) {
p_oPop->CreateTree(10, 10, 4, clTreePopulation::snag, 50);
}
for (i = 0; i < 100; i++) {
p_oPop->CreateTree(10, 10, 5, clTreePopulation::snag, 50);
}
for (i = 0; i < 100; i++) {
p_oPop->CreateTree(10, 10, 6, clTreePopulation::snag, 50);
}
for (i = 0; i < 100; i++) {
p_oPop->CreateTree(10, 10, 7, clTreePopulation::snag, 50);
}
for (i = 0; i < 100; i++) {
p_oPop->CreateTree(10, 10, 8, clTreePopulation::snag, 50);
}
//Add a bunch of seedlings to check seedling destruction
iNumXCells = p_oPop->GetNumXCells();
iNumYCells = p_oPop->GetNumYCells();
iNumSpecies = p_oPop->GetNumberOfSpecies();
fTemp = p_oPop->GetGridCellSize();
p_iC[0] = 1; p_iC[1] = 3; p_iC[2] = 5; p_iC[3] = 7;
for (iX = 0; iX < iNumXCells; iX++) {
for (iY = 0; iY < iNumYCells; iY++) {
for (i = 0; i < iNumSpecies; i++) {
for (j = 0; j < 4; j++) {
for (k = 0; k < 4; k++) {
p_oPop->CreateTree((iX * fTemp) + p_iC[j],
(iY * fTemp) + p_iC[k], i, clTreePopulation::seedling, 0);
}
}
}
}
}
delete[] p_iC;
//*********************************************
// Timestep 1
//*********************************************
//Run the first timestep
p_oSimManager->RunSim(1);
//Total up the basal area for species 2 and 4 - we're expecting 34.3837 sq
//m of species 2 and 33.619 sq m of species 4
fSp2LiveBA = 0; fSp4LiveBA = 0;
fSp2DeadBA = 0; fSp4DeadBA = 0;
p_iC = new int[iNumSpecies];
for (i = 0; i < iNumSpecies; i++) p_iC[i] = 0;
p_oAllTrees = p_oPop->Find("all");
p_oTree = p_oAllTrees->NextTree();
while (p_oTree) {
if (p_oTree->GetType() == clTreePopulation::sapling ||
p_oTree->GetType() == clTreePopulation::adult) {
if (p_oTree->GetSpecies() == 2) {
p_oTree->GetValue(p_oPop->GetDbhCode(p_oTree->GetSpecies(), p_oTree->GetType()), &fTemp);
fSp2LiveBA += clModelMath::CalculateBasalArea(fTemp);
} else if (p_oTree->GetSpecies() == 4) {
p_oTree->GetValue(p_oPop->GetDbhCode(p_oTree->GetSpecies(), p_oTree->GetType()), &fTemp);
fSp4LiveBA += clModelMath::CalculateBasalArea(fTemp);
}
} else if (p_oTree->GetType() == clTreePopulation::snag) {
if (p_oTree->GetSpecies() == 2) {
p_oTree->GetValue(p_oPop->GetDbhCode(p_oTree->GetSpecies(), p_oTree->GetType()), &fTemp);
fSp2DeadBA += clModelMath::CalculateBasalArea(fTemp);
} else if (p_oTree->GetSpecies() == 4) {
p_oTree->GetValue(p_oPop->GetDbhCode(p_oTree->GetSpecies(), p_oTree->GetType()), &fTemp);
fSp4DeadBA += clModelMath::CalculateBasalArea(fTemp);
}
} else if (p_oTree->GetType() == clTreePopulation::seedling) {
p_iC[p_oTree->GetSpecies()]++;
}
p_oTree = p_oAllTrees->NextTree();
}
EXPECT_LT(fabs(fSp2LiveBA - 34.3837)/34.3837, 0.01);
EXPECT_LT(fabs(fSp4LiveBA - 33.61)/33.61, 0.01);
// EXPECT_LT(fabs(fSp2DeadBA - 18.5143)/18.5143, 0.01);
// EXPECT_LT(fabs(fSp4DeadBA - 18.102)/18.102, 0.01);
EXPECT_LT(fabs(fSp2DeadBA - 38.1493)/38.1493, 0.01);
EXPECT_LT(fabs(fSp4DeadBA - 37.7370)/37.7370, 0.01);
for (i = 0; i < iNumSpecies; i++) {
if (i == 2 || i == 4) EXPECT_EQ(p_iC[i], 0);
else EXPECT_EQ(p_iC[i], 10000);
}
//Check the results grid
iNumXCells = p_oResults->GetNumberXCells();
iNumYCells = p_oResults->GetNumberYCells();
for (iX = 0; iX < iNumXCells; iX++) {
for (iY = 0; iY < iNumYCells; iY++) {
for (i = 0; i < iNumSpecies; i++) {
sLabel << "Cut Seedlings_" << i;
p_oResults->GetValueOfCell(iX, iY, p_oResults->GetIntDataCode(sLabel.str()), &j);
if (i == 2 || i == 4) EXPECT_EQ(16, j);
else EXPECT_EQ(0, j);
sLabel.str("");
}
}
}
//*********************************************
// Timestep 3
//*********************************************
p_oSimManager->RunSim(2);
float fSp5LiveRange0_30 = 0, fSp5LiveRange40_80 = 0, fSp5DeadRange0_30 = 0, fSp5DeadRange40_80 = 0;
for (i = 0; i < iNumSpecies; i++) p_iC[i] = 0;
p_oAllTrees = p_oPop->Find("all");
p_oTree = p_oAllTrees->NextTree();
while (p_oTree) {
//Make sure there are no trees of species 2 or 8
if (p_oTree->GetSpecies() == 2 || p_oTree->GetSpecies() == 8) {
ASSERT_TRUE(p_oTree->GetType() == clTreePopulation::snag ||
p_oTree->GetType() == clTreePopulation::seedling);
}
//Total up the basal area for species five between DBH of 0-30 and 40-80
if (p_oTree->GetType() == clTreePopulation::sapling ||
p_oTree->GetType() == clTreePopulation::adult) {
if (p_oTree->GetSpecies() == 5) {
p_oTree->GetValue(p_oPop->GetDbhCode(p_oTree->GetSpecies(), p_oTree->GetType()), &fTemp);
if (fTemp <= 30)
fSp5LiveRange0_30 += clModelMath::CalculateBasalArea(fTemp);
else if (fTemp >= 40 && fTemp <= 80)
fSp5LiveRange40_80 += clModelMath::CalculateBasalArea(fTemp);
}
} else if (p_oTree->GetType() == clTreePopulation::snag) {
if (p_oTree->GetSpecies() == 5) {
p_oTree->GetValue(p_oPop->GetDbhCode(p_oTree->GetSpecies(), p_oTree->GetType()), &fTemp);
if (fTemp <= 30)
fSp5DeadRange0_30 += clModelMath::CalculateBasalArea(fTemp);
else if (fTemp >= 40 && fTemp <= 80)
fSp5DeadRange40_80 += clModelMath::CalculateBasalArea(fTemp);
}
} else if (p_oTree->GetType() == clTreePopulation::seedling) {
p_iC[p_oTree->GetSpecies()]++;
}
p_oTree = p_oAllTrees->NextTree();
}
//Make sure the leftover basal area for species 5 is OK
EXPECT_LT(fabs(fSp5LiveRange0_30 - 0.64226)/0.64226, 0.01);
EXPECT_LT(fabs(fSp5LiveRange40_80 - 23.055)/23.055, 0.01);
EXPECT_LT(fabs(fSp5DeadRange0_30 - 0.8)/0.8, 0.01);
// EXPECT_LT(fabs(fSp5DeadRange40_80 - 0.8)/0.8, 0.01);
EXPECT_LT(fabs(fSp5DeadRange40_80 - 20.435)/20.435, 0.01);
for (i = 0; i < iNumSpecies; i++) {
if (i == 2 || i == 4) EXPECT_EQ(p_iC[i], 0);
else EXPECT_EQ(p_iC[i], 10000);
}
//Check the results grid
iNumXCells = p_oResults->GetNumberXCells();
iNumYCells = p_oResults->GetNumberYCells();
for (iX = 0; iX < iNumXCells; iX++) {
for (iY = 0; iY < iNumYCells; iY++) {
for (i = 0; i < iNumSpecies; i++) {
sLabel << "Cut Seedlings_" << i;
p_oResults->GetValueOfCell(iX, iY, p_oResults->GetIntDataCode(sLabel.str()), &j);
EXPECT_EQ(0, j);
sLabel.str("");
}
}
}
delete[] p_iC;
delete p_oSimManager;
} catch (modelErr &e) {
delete[] p_iC;
delete p_oSimManager;
FAIL() << "Testing failed in function: " << e.sFunction << " with message: " << e.sMoreInfo;
}
}
/////////////////////////////////////////////////////////////////////////////
// DoMortEpisodeRun2()
// Performs the second mortality episode run. This run has the following
// characteristics:
// Mort ep # |TS |Cut Ranges |Species |Cut Type |Cut Amt (abs) |Grids
//-----------|----|-----------|--------|---------|--------------|--------------
// 1 |1 |15-45, |0, 1 |%Dens |50, 40, 30, 20|Whole plot
// | |50-80, | | | |
// | |80 - 85, | | | |
// | |90 - 99 | | | |
//
// The mortality episode will be performed. Then the remaining trees are
// checked to make sure the proper ones were left alone.
/////////////////////////////////////////////////////////////////////////////
TEST(EpisodicMortality, DoMortEpisodeRun2) {
clTreePopulation * p_oPop;
clTreeSearch *p_oAllTrees;
clTree *p_oTree;
clGrid *p_oResults;
int *p_iC = new int[4];
std::stringstream sLabel;
float fTemp;
int iNumXCells, iNumYCells, iNumSpecies, iX, iY, i, j, k,
iSp0Live_90_99 = 0, iSp0Live_80_85 = 0, iSp0Live_50_80 = 0, iSp0Live_15_45 = 0,
iSp1Live_90_99 = 0, iSp1Live_80_85 = 0, iSp1Live_50_80 = 0, iSp1Live_15_45 = 0,
iSp0Dead_90_99 = 0, iSp0Dead_80_85 = 0, iSp0Dead_50_80 = 0, iSp0Dead_15_45 = 0,
iSp1Dead_90_99 = 0, iSp1Dead_80_85 = 0, iSp1Dead_50_80 = 0, iSp1Dead_15_45 = 0;
clSimManager * p_oSimManager = new clSimManager( 7, 1, "" );
try {
p_oSimManager->ReadFile( WriteEpisodicMortalityXMLFile2() );
p_oPop = ( clTreePopulation * ) p_oSimManager->GetPopulationObject( "treepopulation" );
p_oResults = p_oSimManager->GetGridObject("Mortality Episode Results");
//Add many snags to make sure they don't get counted
for (i = 0; i < 100; i++) {
p_oPop->CreateTree(10, 10, 0, clTreePopulation::snag, 50);
}
for (i = 0; i < 100; i++) {
p_oPop->CreateTree(10, 10, 1, clTreePopulation::snag, 50);
}
for (i = 0; i < 100; i++) {
p_oPop->CreateTree(10, 10, 2, clTreePopulation::snag, 50);
}
for (i = 0; i < 100; i++) {
p_oPop->CreateTree(10, 10, 3, clTreePopulation::snag, 50);
}
for (i = 0; i < 100; i++) {
p_oPop->CreateTree(10, 10, 4, clTreePopulation::snag, 50);
}
for (i = 0; i < 100; i++) {
p_oPop->CreateTree(10, 10, 5, clTreePopulation::snag, 50);
}
for (i = 0; i < 100; i++) {
p_oPop->CreateTree(10, 10, 6, clTreePopulation::snag, 50);
}
for (i = 0; i < 100; i++) {
p_oPop->CreateTree(10, 10, 7, clTreePopulation::snag, 50);
}
for (i = 0; i < 100; i++) {
p_oPop->CreateTree(10, 10, 8, clTreePopulation::snag, 50);
}
//Add a bunch of seedlings to check seedling destruction
iNumXCells = p_oPop->GetNumXCells();
iNumYCells = p_oPop->GetNumYCells();
iNumSpecies = p_oPop->GetNumberOfSpecies();
fTemp = p_oPop->GetGridCellSize();
p_iC[0] = 1; p_iC[1] = 3; p_iC[2] = 5; p_iC[3] = 7;
for (iX = 0; iX < iNumXCells; iX++) {
for (iY = 0; iY < iNumYCells; iY++) {
for (i = 0; i < iNumSpecies; i++) {
for (j = 0; j < 4; j++) {
for (k = 0; k < 4; k++) {
p_oPop->CreateTree((iX * fTemp) + p_iC[j],
(iY * fTemp) + p_iC[k], i, clTreePopulation::seedling, 0);
}
}
}
}
}
delete[] p_iC;
//*********************************************
// Timestep 1
//*********************************************
//Run the first timestep
p_oSimManager->RunSim(1);
//Count up the trees in our size classes
p_iC = new int[iNumSpecies];
for (i = 0; i < iNumSpecies; i++) p_iC[i] = 0;
p_oAllTrees = p_oPop->Find("all");
p_oTree = p_oAllTrees->NextTree();
while (p_oTree) {
if (p_oTree->GetType() == clTreePopulation::sapling ||
p_oTree->GetType() == clTreePopulation::adult) {
if (p_oTree->GetSpecies() == 1) {
p_oTree->GetValue(p_oPop->GetDbhCode(p_oTree->GetSpecies(), p_oTree->GetType()), &fTemp);
if (fTemp >= 90 && fTemp <= 99)
iSp1Live_90_99++;
else if (fTemp >= 80 && fTemp <= 85)
iSp1Live_80_85++;
else if (fTemp >= 50 && fTemp <= 80)
iSp1Live_50_80++;
else if (fTemp >= 15 && fTemp <= 45)
iSp1Live_15_45++;
} else if (p_oTree->GetSpecies() == 0) {
p_oTree->GetValue(p_oPop->GetDbhCode(p_oTree->GetSpecies(), p_oTree->GetType()), &fTemp);
if (fTemp >= 90 && fTemp <= 99)
iSp0Live_90_99++;
else if (fTemp >= 80 && fTemp <= 85)
iSp0Live_80_85++;
else if (fTemp >= 50 && fTemp <= 80)
iSp0Live_50_80++;
else if (fTemp >= 15 && fTemp <= 45)
iSp0Live_15_45++;
}
} else if (p_oTree->GetType() == clTreePopulation::snag) {
if (p_oTree->GetSpecies() == 1) {
p_oTree->GetValue(p_oPop->GetDbhCode(p_oTree->GetSpecies(), p_oTree->GetType()), &fTemp);
if (fTemp >= 90 && fTemp <= 99)
iSp1Dead_90_99++;
else if (fTemp >= 80 && fTemp <= 85)
iSp1Dead_80_85++;
else if (fTemp >= 50 && fTemp <= 80)
iSp1Dead_50_80++;
else if (fTemp >= 15 && fTemp <= 45)
iSp1Dead_15_45++;
} else if (p_oTree->GetSpecies() == 0) {
p_oTree->GetValue(p_oPop->GetDbhCode(p_oTree->GetSpecies(), p_oTree->GetType()), &fTemp);
if (fTemp >= 90 && fTemp <= 99)
iSp0Dead_90_99++;
else if (fTemp >= 80 && fTemp <= 85)
iSp0Dead_80_85++;
else if (fTemp >= 50 && fTemp <= 80)
iSp0Dead_50_80++;
else if (fTemp >= 15 && fTemp <= 45)
iSp0Dead_15_45++;
}
} else if (p_oTree->GetType() == clTreePopulation::seedling) {
p_iC[p_oTree->GetSpecies()]++;
}
p_oTree = p_oAllTrees->NextTree();
}
ASSERT_TRUE(iSp1Live_90_99 >= 9 && iSp1Live_90_99 <= 14);
ASSERT_TRUE(iSp1Live_80_85 >= 6 && iSp1Live_80_85 <= 12);
ASSERT_TRUE(iSp1Live_50_80 >= 34 && iSp1Live_50_80 <= 46);
ASSERT_TRUE(iSp1Live_15_45 >= 25 && iSp1Live_15_45 <= 35);
ASSERT_TRUE(iSp0Live_90_99 >= 8 && iSp0Live_90_99 <= 14);
ASSERT_TRUE(iSp0Live_80_85 >= 5 && iSp0Live_80_85 <= 10);
ASSERT_TRUE(iSp0Live_50_80 >= 31 && iSp0Live_50_80 <= 41);
ASSERT_TRUE(iSp0Live_15_45 >= 23 && iSp0Live_50_80 <= 40);
ASSERT_TRUE(iSp1Dead_90_99 >= 1 && iSp1Dead_90_99 <= 8);
ASSERT_TRUE(iSp1Dead_80_85 >= 1 && iSp1Dead_80_85 <= 7);
ASSERT_TRUE(iSp1Dead_50_80 >= 115 && iSp0Dead_50_80 <= 128);
ASSERT_TRUE(iSp1Dead_15_45 >= 25 && iSp1Dead_15_45 <= 37);
ASSERT_TRUE(iSp0Dead_90_99 >= 1 && iSp0Dead_90_99 <= 8);
ASSERT_TRUE(iSp0Dead_80_85 >= 1 && iSp0Dead_80_85 <= 7);
ASSERT_TRUE(iSp0Dead_50_80 >= 120 && iSp0Dead_50_80 <= 128);
ASSERT_TRUE(iSp0Dead_15_45 >= 25 && iSp0Dead_15_45 <= 37);
for (i = 0; i < iNumSpecies; i++) {
EXPECT_EQ(p_iC[i], 10000);
}
//Check the results grid
iNumXCells = p_oResults->GetNumberXCells();
iNumYCells = p_oResults->GetNumberYCells();
for (iX = 0; iX < iNumXCells; iX++) {
for (iY = 0; iY < iNumYCells; iY++) {
for (i = 0; i < iNumSpecies; i++) {
sLabel << "Cut Seedlings_" << i;
p_oResults->GetValueOfCell(iX, iY, p_oResults->GetIntDataCode(sLabel.str()), &j);
EXPECT_EQ(0, j);
sLabel.str("");
}
}
}
delete[] p_iC;
delete p_oSimManager;
} catch (modelErr &e) {
delete[] p_iC;
delete p_oSimManager;
FAIL() << "Testing failed in function: " << e.sFunction << " with message: " << e.sMoreInfo;
}
}
/////////////////////////////////////////////////////////////////////////////
// DoMortEpisodeRun3()
// Performs the first mortality episode run. This run has the following
// characteristics:
// Mort ep # |TS |Cut Ranges |Species |Cut Type |Cut Amt (abs) |Grids
//-----------|----|-----------|--------|---------|--------------|--------------
// 1 |1 |15-45, |6, 7 |Abs Den |1 |Whole plot
// | |50-80, | | | |
// | |80 - 85, | | | |
// | |90 - 100 | | | |
//
// The mortality episode will be performed. Then the remaining trees are
// checked to make sure the proper ones were left alone.
/////////////////////////////////////////////////////////////////////////////
TEST(EpisodicMortality, DoMortEpisodeRun3) {
clTreePopulation * p_oPop;
clTreeSearch *p_oAllTrees;
clTree *p_oTree;
clGrid *p_oResults;
std::stringstream sLabel;
int *p_iC = new int[4];
float fTemp;
int iNumXCells, iNumYCells, iNumSpecies, iX, iY, i, j, k,
iSp6Live_90_99 = 0, iSp6Live_80_85 = 0, iSp6Live_50_80 = 0, iSp6Live_15_45 = 0,
iSp7Live_90_99 = 0, iSp7Live_80_85 = 0, iSp7Live_50_80 = 0, iSp7Live_15_45 = 0,
iSp6Dead_90_99 = 0, iSp6Dead_80_85 = 0, iSp6Dead_50_80 = 0, iSp6Dead_15_45 = 0,
iSp7Dead_90_99 = 0, iSp7Dead_80_85 = 0, iSp7Dead_50_80 = 0, iSp7Dead_15_45 = 0;
clSimManager * p_oSimManager = new clSimManager( 7, 1, "" );
try {
p_oSimManager->ReadFile( WriteEpisodicMortalityXMLFile3() );
p_oPop = ( clTreePopulation * ) p_oSimManager->GetPopulationObject( "treepopulation" );
p_oResults = p_oSimManager->GetGridObject("Mortality Episode Results");
//Add a bunch of seedlings to check seedling destruction
iNumXCells = p_oPop->GetNumXCells();
iNumYCells = p_oPop->GetNumYCells();
iNumSpecies = p_oPop->GetNumberOfSpecies();
fTemp = p_oPop->GetGridCellSize();
p_iC[0] = 1; p_iC[1] = 3; p_iC[2] = 5; p_iC[3] = 7;
for (iX = 0; iX < iNumXCells; iX++) {
for (iY = 0; iY < iNumYCells; iY++) {
for (i = 0; i < iNumSpecies; i++) {
for (j = 0; j < 4; j++) {
for (k = 0; k < 4; k++) {
p_oPop->CreateTree((iX * fTemp) + p_iC[j],
(iY * fTemp) + p_iC[k], i, clTreePopulation::seedling, 0);
}
}
}
}
}
delete[] p_iC;
//*********************************************
// Timestep 1
//*********************************************
//Run the first timestep
p_oSimManager->RunSim(1);
//Count up the trees in our size classes
p_iC = new int[iNumSpecies];
for (i = 0; i < iNumSpecies; i++) p_iC[i] = 0;
p_oAllTrees = p_oPop->Find("all");
p_oTree = p_oAllTrees->NextTree();
while (p_oTree) {
if (p_oTree->GetType() == clTreePopulation::sapling ||
p_oTree->GetType() == clTreePopulation::adult) {
if (p_oTree->GetSpecies() == 7) {
p_oTree->GetValue(p_oPop->GetDbhCode(p_oTree->GetSpecies(), p_oTree->GetType()), &fTemp);
if (fTemp >= 90 && fTemp <= 100)
iSp7Live_90_99++;
else if (fTemp >= 80 && fTemp <= 85)
iSp7Live_80_85++;
else if (fTemp >= 50 && fTemp <= 80)
iSp7Live_50_80++;
else if (fTemp >= 15 && fTemp <= 45)
iSp7Live_15_45++;
} else if (p_oTree->GetSpecies() == 6) {
p_oTree->GetValue(p_oPop->GetDbhCode(p_oTree->GetSpecies(), p_oTree->GetType()), &fTemp);
if (fTemp >= 90 && fTemp <= 100)
iSp6Live_90_99++;
else if (fTemp >= 80 && fTemp <= 85)
iSp6Live_80_85++;
else if (fTemp >= 50 && fTemp <= 80)
iSp6Live_50_80++;
else if (fTemp >= 15 && fTemp <= 45)
iSp6Live_15_45++;
}
} else if (p_oTree->GetType() == clTreePopulation::snag) {
if (p_oTree->GetSpecies() == 7) {
p_oTree->GetValue(p_oPop->GetDbhCode(p_oTree->GetSpecies(), p_oTree->GetType()), &fTemp);
if (fTemp >= 90 && fTemp <= 100)
iSp7Dead_90_99++;
else if (fTemp >= 80 && fTemp <= 85)
iSp7Dead_80_85++;
else if (fTemp >= 50 && fTemp <= 80)
iSp7Dead_50_80++;
else if (fTemp >= 15 && fTemp <= 45)
iSp7Dead_15_45++;
} else if (p_oTree->GetSpecies() == 6) {
p_oTree->GetValue(p_oPop->GetDbhCode(p_oTree->GetSpecies(), p_oTree->GetType()), &fTemp);
if (fTemp >= 90 && fTemp <= 100)
iSp6Dead_90_99++;
else if (fTemp >= 80 && fTemp <= 85)
iSp6Dead_80_85++;
else if (fTemp >= 50 && fTemp <= 80)
iSp6Dead_50_80++;
else if (fTemp >= 15 && fTemp <= 45)
iSp6Dead_15_45++;
}
} else if (p_oTree->GetType() == clTreePopulation::seedling) {
p_iC[p_oTree->GetSpecies()]++;
}
p_oTree = p_oAllTrees->NextTree();
}
EXPECT_EQ(iSp7Live_90_99, 16);
EXPECT_EQ(iSp7Live_80_85, 3);
EXPECT_EQ(iSp7Live_50_80, 56);
EXPECT_EQ(iSp7Live_15_45, 55);
EXPECT_EQ(iSp6Live_90_99, 16);
EXPECT_EQ(iSp6Live_80_85, 8);
EXPECT_EQ(iSp6Live_50_80, 56);
EXPECT_EQ(iSp6Live_15_45, 56);
EXPECT_EQ(iSp7Dead_90_99, 4);
EXPECT_EQ(iSp7Dead_80_85, 4);
EXPECT_EQ(iSp7Dead_50_80, 4);
EXPECT_EQ(iSp7Dead_15_45, 4);
EXPECT_EQ(iSp6Dead_90_99, 4);
EXPECT_EQ(iSp6Dead_80_85, 4);
EXPECT_EQ(iSp6Dead_50_80, 4);
EXPECT_EQ(iSp6Dead_15_45, 4);
for (i = 0; i < iNumSpecies; i++) {
EXPECT_EQ(p_iC[i], 10000);
}
//Check the results grid
iNumXCells = p_oResults->GetNumberXCells();
iNumYCells = p_oResults->GetNumberYCells();
for (iX = 0; iX < iNumXCells; iX++) {
for (iY = 0; iY < iNumYCells; iY++) {
for (i = 0; i < iNumSpecies; i++) {
sLabel << "Cut Seedlings_" << i;
p_oResults->GetValueOfCell(iX, iY, p_oResults->GetIntDataCode(sLabel.str()), &j);
EXPECT_EQ(0, j);
sLabel.str("");
}
}
}
delete[] p_iC;
delete p_oSimManager;
} catch (modelErr &e) {
delete[] p_iC;
delete p_oSimManager;
FAIL() << "Testing failed in function: " << e.sFunction << " with message: " << e.sMoreInfo;
}
}
/////////////////////////////////////////////////////////////////////////////
// DoMortEpisodeRun4()
// Performs the fourth mortality episode run. This run has the following
// characteristics:
// Mort ep # |TS |Cut Ranges |Species |Cut Type |Cut Amt (abs) |Grids
//-----------|---|------------|--------|---------|--------------|--------------
// 1 |2 |Min 0 |0, 1, 2 |Gap |100% |Whole plot
// 2 |2 |15-45, |4, 5 |% BA |50, 100, 30, 0|(0,0) - (5,9)
// | |50-80, | | | |
// | |80-85, | | | |
// | |90-100 | | | |
// 3 |3 |200-300, |4 |Abs BA |50, 100, 30, 0|(6,6) - (6-24),
// | |50-80, | | | |(8,6) - (8-24)
// | |80-85, | | | |
// | |90-100 | | | |
// 4 |3 |0-10, 10-20,|7 |% Dens |50, 100, 30, 0|(0,0) - (5,9)
// | |20-30, 30-40| | | |
// The mortality episode will be performed. Then the remaining trees are
// checked to make sure the proper ones were left alone.
/////////////////////////////////////////////////////////////////////////////
TEST(EpisodicMortality, DoMortEpisodeRun4) {
clTreePopulation * p_oPop;
clTreeSearch *p_oAllTrees;
clTree *p_oTree;
clGrid *p_oResults;
std::stringstream sLabel;
float fTemp;
int iNumXCells, iNumYCells, iNumSpecies, iX, iY, j, k,
iNumTrees = 1980, iCounter = 0, i;
//Fake tree structure
treestruct *p_oFakeTrees = new treestruct[iNumTrees];
int *p_iC = new int[4];
int *p_iSeedlsOutside = NULL;
clSimManager * p_oSimManager = new clSimManager( 7, 1, "" );
try {
p_oSimManager->ReadFile( WriteEpisodicMortalityXMLFile4() );
p_oPop = ( clTreePopulation * ) p_oSimManager->GetPopulationObject( "treepopulation" );
p_oResults = p_oSimManager->GetGridObject("Mortality Episode Results");
//Add a bunch of seedlings to check seedling destruction
iNumXCells = p_oPop->GetNumXCells();
iNumYCells = p_oPop->GetNumYCells();
iNumSpecies = p_oPop->GetNumberOfSpecies();
fTemp = p_oPop->GetGridCellSize();
p_iC[0] = 1; p_iC[1] = 3; p_iC[2] = 5; p_iC[3] = 7;
for (iX = 0; iX < iNumXCells; iX++) {
for (iY = 0; iY < iNumYCells; iY++) {
for (i = 0; i < iNumSpecies; i++) {
for (j = 0; j < 4; j++) {
for (k = 0; k < 4; k++) {
p_oPop->CreateTree((iX * fTemp) + p_iC[j],
(iY * fTemp) + p_iC[k], i, clTreePopulation::seedling, 0);
}
}
}
}
}
delete[] p_iC;
//*********************************************
// Timestep 1
//*********************************************
//Run the first timestep
p_oSimManager->RunSim(1);
//Verify that there was no disturbance
iNumSpecies = p_oPop->GetNumberOfSpecies();
int *p_iSpCount = new int[iNumSpecies];
p_iC = new int[iNumSpecies];
for (i = 0; i < iNumSpecies; i++) {
p_iSpCount[i] = 0;
p_iC[i] = 0;
}
p_oAllTrees = p_oPop->Find("all");
p_oTree = p_oAllTrees->NextTree();
while (p_oTree) {
ASSERT_TRUE(p_oTree->GetType() != clTreePopulation::snag);
if (p_oTree->GetType() == clTreePopulation::sapling ||
p_oTree->GetType() == clTreePopulation::adult) {
p_iSpCount[p_oTree->GetSpecies()]++;
} else if (p_oTree->GetType() == clTreePopulation::seedling) {
p_iC[p_oTree->GetSpecies()]++;
}
p_oTree = p_oAllTrees->NextTree();
}
for (i = 0; i < iNumSpecies; i++) {
EXPECT_EQ(p_iSpCount[i], 220);
EXPECT_EQ(p_iC[i], 10000);
}
delete[] p_iSpCount;
//*********************************************
// Timestep 2
//*********************************************
//Populate the fake tree struct with X and Y coords
p_oAllTrees = p_oPop->Find("all");
p_oTree = p_oAllTrees->NextTree();
while (p_oTree) {
if (p_oTree->GetType() > clTreePopulation::seedling) {
p_oTree->GetValue(p_oPop->GetXCode(p_oTree->GetSpecies(), p_oTree->GetType()), &fTemp);
p_oFakeTrees[iCounter].fX = fTemp;
p_oTree->GetValue(p_oPop->GetYCode(p_oTree->GetSpecies(), p_oTree->GetType()), &fTemp);
p_oFakeTrees[iCounter].fY = fTemp;
p_oFakeTrees[iCounter].iSpecies = p_oTree->GetSpecies();
p_oFakeTrees[iCounter].bDead = false;
p_oFakeTrees[iCounter].bFound = false;
iCounter++;
if (iCounter == iNumTrees) break;
}
p_oTree = p_oAllTrees->NextTree();
}
//Expected results
//There should be nothing for species 0, 1, 2; for 4 and 5, do the specific trees
for (i = 0; i < iNumTrees; i++) {
if (0 == p_oFakeTrees[i].iSpecies ||
1 == p_oFakeTrees[i].iSpecies ||
2 == p_oFakeTrees[i].iSpecies) {
p_oFakeTrees[i].bDead = true;
}
else if (fabs(p_oFakeTrees[i].fX - 30.957) < 0.001 && fabs(p_oFakeTrees[i].fY - 52.1729) < 0.001) p_oFakeTrees[i].bDead = true;
else if (fabs(p_oFakeTrees[i].fX - 20.5322) < 0.001 && fabs(p_oFakeTrees[i].fY - 41.9495) < 0.001) p_oFakeTrees[i].bDead = true;
else if (fabs(p_oFakeTrees[i].fX - 39.9719) < 0.001 && fabs(p_oFakeTrees[i].fY - 77.1362) < 0.001) p_oFakeTrees[i].bDead = true;
else if (fabs(p_oFakeTrees[i].fX - 19.3359) < 0.001 && fabs(p_oFakeTrees[i].fY - 27.6611) < 0.001) p_oFakeTrees[i].bDead = true;
else if (fabs(p_oFakeTrees[i].fX - 13.7268) < 0.001 && fabs(p_oFakeTrees[i].fY - 27.3499) < 0.001) p_oFakeTrees[i].bDead = true;
else if (fabs(p_oFakeTrees[i].fX - 28.3142) < 0.001 && fabs(p_oFakeTrees[i].fY - 53.8513) < 0.001) p_oFakeTrees[i].bDead = true;
else if (fabs(p_oFakeTrees[i].fX - 39.2273) < 0.001 && fabs(p_oFakeTrees[i].fY - 1.5686) < 0.001) p_oFakeTrees[i].bDead = true;
else if (fabs(p_oFakeTrees[i].fX - 33.5754) < 0.001 && fabs(p_oFakeTrees[i].fY - 2.94189) < 0.001) p_oFakeTrees[i].bDead = true;
else if (fabs(p_oFakeTrees[i].fX - 15.1917) < 0.001 && fabs(p_oFakeTrees[i].fY - 47.8943) < 0.001) p_oFakeTrees[i].bDead = true;
else if (fabs(p_oFakeTrees[i].fX - 47.229) < 0.001 && fabs(p_oFakeTrees[i].fY - 1.01318) < 0.001) p_oFakeTrees[i].bDead = true;
else if (fabs(p_oFakeTrees[i].fX - 40.8142) < 0.001 && fabs(p_oFakeTrees[i].fY - 30.3772) < 0.001) p_oFakeTrees[i].bDead = true;
else if (fabs(p_oFakeTrees[i].fX - 30.6702) < 0.001 && fabs(p_oFakeTrees[i].fY - 74.1028) < 0.001) p_oFakeTrees[i].bDead = true;
else if (fabs(p_oFakeTrees[i].fX - 39.3311) < 0.001 && fabs(p_oFakeTrees[i].fY - 55.3711) < 0.001) p_oFakeTrees[i].bDead = true;
else if (fabs(p_oFakeTrees[i].fX - 0.219727) < 0.001 && fabs(p_oFakeTrees[i].fY - 45.8801) < 0.001) p_oFakeTrees[i].bDead = true;
else if (fabs(p_oFakeTrees[i].fX - 15.5945) < 0.001 && fabs(p_oFakeTrees[i].fY - 8.71582) < 0.001) p_oFakeTrees[i].bDead = true;
else if (fabs(p_oFakeTrees[i].fX - 25.1953) < 0.001 && fabs(p_oFakeTrees[i].fY - 8.25806) < 0.001) p_oFakeTrees[i].bDead = true;
}
//Run the sim and check the results
p_oSimManager->RunSim(1);
CheckEpisodicMortalityResults(p_oPop, iNumTrees, p_oFakeTrees);
for (i = 0; i < iNumSpecies; i++) p_iC[i] = 0;
p_oAllTrees = p_oPop->Find("type=1");
p_oTree = p_oAllTrees->NextTree();
while (p_oTree) {
p_iC[p_oTree->GetSpecies()]++;
p_oTree = p_oAllTrees->NextTree();
}
for (i = 0; i < iNumSpecies; i++) {
if (i < 6) EXPECT_LT(p_iC[i] > 4500 && p_iC[i], 5500);
else EXPECT_EQ(p_iC[i], 10000);
}
//Check the results grid
iNumXCells = p_oResults->GetNumberXCells();
iNumYCells = p_oResults->GetNumberYCells();
for (iX = 0; iX < iNumXCells; iX++) {
for (iY = 0; iY < iNumYCells; iY++) {
for (i = 0; i < iNumSpecies; i++) {
sLabel << "Cut Seedlings_" << i;
p_oResults->GetValueOfCell(iX, iY, p_oResults->GetIntDataCode(sLabel.str()), &j);
if (i < 6) EXPECT_LT(j > 1 && j, 15);
else EXPECT_EQ(0, j);
sLabel.str("");
}
}
}
//*********************************************
// Timestep 3
//*********************************************
float fX, fY;
int iSp7LiveOutsideCut = 0, iSp7Live_0_10 = 0, iSp7Live_10_20 = 0, iSp7Live_20_30 = 0, iSp7Live_30_40 = 0;
//Run the sim
p_oSimManager->RunSim(1);
p_iSeedlsOutside = new int[iNumSpecies];
for (i = 0; i < iNumSpecies; i++) {
p_iC[i] = 0;
p_iSeedlsOutside[i] = 0;
}
p_oAllTrees = p_oPop->Find("all");
p_oTree = p_oAllTrees->NextTree();
while (p_oTree) {
p_oTree->GetValue(p_oPop->GetXCode(p_oTree->GetSpecies(), p_oTree->GetType()), &fX);
p_oTree->GetValue(p_oPop->GetYCode(p_oTree->GetSpecies(), p_oTree->GetType()), &fY);
if (p_oTree->GetType() > clTreePopulation::seedling) {
//Make sure the correct species 4 trees have been cut - they shouldn't show up
if ((fabs(fX - 67.5964) < 0.001 && fabs(fY - 94.4275) < 0.001) ||
(fabs(fX - 67.5964) < 0.001 && fabs(fY - 94.4275) < 0.001) ||
(fabs(fX - 51.9287) < 0.001 && fabs(fY - 131.873) < 0.001) ||
(fabs(fX - 54.5044) < 0.001 && fabs(fY - 85.0464) < 0.001)) {
EXPECT_EQ(p_oTree->GetType(), clTreePopulation::snag);
}
//Count the species 7 trees both within the cut area and outside it
if (p_oTree->GetType() != clTreePopulation::snag) {
if (7 == p_oTree->GetSpecies()) {
if (fX >= 48 || fY >= 80) {
//This tree is outside the cut area
ASSERT_TRUE(p_oTree->GetType() != clTreePopulation::snag);
iSp7LiveOutsideCut++;
} else {
//Get the DBH
p_oTree->GetValue(p_oPop->GetDbhCode(p_oTree->GetSpecies(), p_oTree->GetType()), &fTemp);
if (fTemp >= 0 && fTemp <= 10)
iSp7Live_0_10++;
else if (fTemp >= 10 && fTemp <= 20)
iSp7Live_10_20++;
else if (fTemp >= 20 && fTemp <= 30)
iSp7Live_20_30++;
else if (fTemp >= 30 && fTemp <= 40)
iSp7Live_30_40++;
}
}
}
} else {
if (fX >= 48 || fY >= 80) {
p_iSeedlsOutside[p_oTree->GetSpecies()]++;
} else {
p_iC[p_oTree->GetSpecies()]++;
}
}
p_oTree = p_oAllTrees->NextTree();
}
//Make sure there were no trees cut outside the cut area
EXPECT_EQ(197, iSp7LiveOutsideCut);
for (i = 6; i < iNumSpecies; i++) {
EXPECT_EQ(p_iSeedlsOutside[i], 9040);
}
//Make sure the right number of trees within the cut were cut
ASSERT_TRUE(1 <= iSp7Live_0_10 || 4 >= iSp7Live_0_10);
EXPECT_EQ(0, iSp7Live_10_20);
EXPECT_EQ(0, iSp7Live_20_30);
EXPECT_EQ(4, iSp7Live_30_40);
EXPECT_LT(p_iC[6] > 650 && p_iC[6], 800);
EXPECT_EQ(p_iC[7], 960);
EXPECT_EQ(p_iC[8], 960);
//Check the results grid
iNumXCells = p_oResults->GetNumberXCells();
iNumYCells = p_oResults->GetNumberYCells();
for (iX = 0; iX < iNumXCells; iX++) {
for (iY = 0; iY < iNumYCells; iY++) {
if (iX > 5 || iY > 9) {
for (i = 0; i < iNumSpecies; i++) {
sLabel << "Cut Seedlings_" << i;
p_oResults->GetValueOfCell(iX, iY, p_oResults->GetIntDataCode(sLabel.str()), &j);
EXPECT_EQ(0, j);
sLabel.str("");
}
} else {
for (i = 0; i < iNumSpecies; i++) {
sLabel << "Cut Seedlings_" << i;
p_oResults->GetValueOfCell(iX, iY, p_oResults->GetIntDataCode(sLabel.str()), &j);
if (i == 6)
EXPECT_LT(j > 0 && j, 10);
else EXPECT_EQ(0, j);
sLabel.str("");
}
}
}
}
delete[] p_oFakeTrees;
delete[] p_iC;
delete[] p_iSeedlsOutside;
delete p_oSimManager;
} catch (modelErr &e) {
delete[] p_oFakeTrees;
delete[] p_iC;
delete[] p_iSeedlsOutside;
delete p_oSimManager;
FAIL() << "Testing failed in function: " << e.sFunction << " with message: " << e.sMoreInfo;
}
}
/////////////////////////////////////////////////////////////////////////////
// DoMortEpisodeRun5()
// Performs the fifth mortality episode run. This run has the following
// characteristics:
// Mort ep # |TS |Cut Ranges |Species |Cut Type |Cut Amt (abs) |Grids
//-----------|---|------------|--------|---------|--------------|--------------
// 1 |1 |0-10, 10-20,|0-8 |Abs Den |5, 100, 3, 0 |(6,6) - (6-24);
// | |20-30, 30-40| | | |(8,0) - (24-12)
//
// The mortality episode will be performed. Then the remaining trees are
// checked to make sure the proper ones were left alone.
/////////////////////////////////////////////////////////////////////////////
TEST(EpisodicMortality, DoMortEpisodeRun5) {
clTreePopulation * p_oPop;
clTreeSearch *p_oAllTrees;
clTree *p_oTree;
clGrid *p_oResults;
int *p_iC = new int[4];
std::stringstream sLabel;
float fTemp, fX, fY;
int iNumXCells, iNumYCells, iNumSpecies, iX, iY, j, k,
iNumTrees = 1980, iCounter = 0, i;
//Fake tree structure
treestruct *p_oFakeTrees = new treestruct[iNumTrees];
clSimManager * p_oSimManager = new clSimManager( 7, 1, "" );
try {
p_oSimManager->ReadFile( WriteEpisodicMortalityXMLFile5() );
p_oPop = ( clTreePopulation * ) p_oSimManager->GetPopulationObject( "treepopulation" );
p_oResults = p_oSimManager->GetGridObject("Mortality Episode Results");
//Add a bunch of seedlings to check seedling destruction
iNumXCells = p_oPop->GetNumXCells();
iNumYCells = p_oPop->GetNumYCells();
iNumSpecies = p_oPop->GetNumberOfSpecies();
fTemp = p_oPop->GetGridCellSize();
p_iC[0] = 1; p_iC[1] = 3; p_iC[2] = 5; p_iC[3] = 7;
for (iX = 0; iX < iNumXCells; iX++) {
for (iY = 0; iY < iNumYCells; iY++) {
for (i = 0; i < iNumSpecies; i++) {
for (j = 0; j < 4; j++) {
for (k = 0; k < 4; k++) {
p_oPop->CreateTree((iX * fTemp) + p_iC[j],
(iY * fTemp) + p_iC[k], i, clTreePopulation::seedling, 0);
}
}
}
}
}
delete[] p_iC;
//*********************************************
// Timestep 1
//*********************************************
//Populate the fake tree struct with X and Y coords
p_oAllTrees = p_oPop->Find("all");
p_oTree = p_oAllTrees->NextTree();
while (p_oTree) {
if (p_oTree->GetType() > clTreePopulation::seedling) {
p_oTree->GetValue(p_oPop->GetXCode(p_oTree->GetSpecies(), p_oTree->GetType()), &fTemp);
p_oFakeTrees[iCounter].fX = fTemp;
p_oTree->GetValue(p_oPop->GetYCode(p_oTree->GetSpecies(), p_oTree->GetType()), &fTemp);
p_oFakeTrees[iCounter].fY = fTemp;
p_oFakeTrees[iCounter].iSpecies = p_oTree->GetSpecies();
p_oFakeTrees[iCounter].bDead = false;
p_oFakeTrees[iCounter].bFound = false;
iCounter++;
if (iCounter == iNumTrees) break;
}
p_oTree = p_oAllTrees->NextTree();
}
//Expected results
for (i = 0; i < iNumTrees; i++) {
if (fabs(p_oFakeTrees[i].fX - 136.267) < 0.001 && fabs(p_oFakeTrees[i].fY - 67.7246) < 0.001) p_oFakeTrees[i].bDead = true;
else if (fabs(p_oFakeTrees[i].fX - 195.917) < 0.001 && fabs(p_oFakeTrees[i].fY - 49.1394) < 0.001) p_oFakeTrees[i].bDead = true;
else if (fabs(p_oFakeTrees[i].fX - 75.8118) < 0.001 && fabs(p_oFakeTrees[i].fY - 50.47) < 0.001) p_oFakeTrees[i].bDead = true;
else if (fabs(p_oFakeTrees[i].fX - 64.4714) < 0.001 && fabs(p_oFakeTrees[i].fY - 30.3589) < 0.001) p_oFakeTrees[i].bDead = true;