This repository contains the Snakemake workflow used for the bioinformatic analyses in Tzlil et al (2025) Structural insights into light harvesting by antenna-containing rhodopsins in marine Asgard archaea Nat Microbiol.
The workflow was run using Snakemake v. 8.18.2. Most of the dependencies are managed with conda (--use-conda). SplitsTreeCMD v. 4 can be downloaded here.
All of the output files are specified in rule all. For the data and their description refer to Structural insights into light harvesting by antenna-containing rhodopsins in marine Asgard archaea. Bioinformatic Data.