[BUG] #48
Description
Describe the bug
Hi Alan:
I'm a new user in SpectralAnalysis. After I run the code you provide, I found here comes an error.If possible,could you help me to solve this?
Many Thanks
Jeremy
To Reproduce
Steps to reproduce the behavior:
- Run the code.
- Press the ImzML button in Open and choose MouseBrainCerebellum.imzML in the example folder.
- See error that shows "Java exception occurred:".
Expected behavior
The data should be showed from the viewer.
Screenshots
Error using ImzMLParser/parse (line 56)
Java exception occurred:
java.lang.StringIndexOutOfBoundsException: String index out of range: -1
at java.lang.String.substring(String.java:1967)
at com.alanmrace.jimzmlparser.obo.OBO.<init>(OBO.java:115)
at com.alanmrace.jimzmlparser.obo.OBO.<init>(OBO.java:119)
at com.alanmrace.jimzmlparser.obo.OBO.<init>(OBO.java:119)
at com.alanmrace.jimzmlparser.obo.OBO.loadOntologyFromFile(OBO.java:252)
at com.alanmrace.jimzmlparser.obo.OBO.getOBO(OBO.java:169)
at com.alanmrace.jimzmlparser.parser.ImzMLHandler.parseimzML(ImzMLHandler.java:178)
at com.alanmrace.jimzmlparser.parser.ImzMLHandler.parseimzML(ImzMLHandler.java:156)
at com.alanmrace.jimzmlparser.parser.ImzMLHandler.parseimzML(ImzMLHandler.java:140)
Error in SpectralAnalysisInterface/openFile (line 79)
parser.parse();
Error in SpectralAnalysisInterface>@(src,evnt)this.openFile(this.openFileMethods{i}) (line 330)
'Callback', @(src, evnt) this.openFile(this.openFileMethods{i}));
Error while evaluating Menu Callback.
Software version
- Version number 1.4.0-38ce932
- Source code
If using source code, MATLAB version (please complete the following information):
- MATLAB R2021b
Desktop (please complete the following information):
- OS: [Windows]
- Version [ Windows 10]
Additional context